IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3103	 47.29	0	3817738..3818769	+	343	157962933	-	Spea_3116	-	2-dehydropantoate 2-reductase
3104	 47.33	0	3818940..3820439	+	499	157962934	-	Spea_3117	-	sodium:neurotransmitter symporter
3105	 46.33	0	3820639..3821346	+	235	157962935	-	Spea_3118	-	phosphoesterase PA-phosphatase related
3106	 46.58	0	3821350..3822225	-	291	157962936	-	Spea_3119	-	hypothetical protein
3107	 46.26	0	3822410..3823972	-	520	157962937	-	Spea_3120	-	AbgT putative transporter
3108	 46.29	0	3824190..3825038	-	282	157962938	-	Spea_3121	-	2-dehydro-3-deoxyphosphooctonate aldolase
3109	 45.86	0	3825108..3826376	-	422	157962939	-	Spea_3122	-	hypothetical protein
3110	 43.98	0	3826590..3827378	-	262	157962940	-	Spea_3123	-	hypothetical protein
3111	 41.16	-1	3827378..3827773	-	131	157962941	-	Spea_3124	-	invasion gene expression up-regulator SirB
3112	 45.31	0	3828059..3828901	-	280	157962942	-	Spea_3125	-	HemK family modification methylase
3113	 46.41	0	3828949..3830034	-	361	157962