IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3026	 48.87	+1	3725818..3726390	-	190	157962856	-	Spea_3038	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
3027	 48.79	+1	3726403..3728679	-	758	157962857	-	Spea_3039	-	molybdopterin oxidoreductase
3028	 47.62	0	3729023..3730807	-	594	157962858	-	Spea_3040	-	histidine kinase
3029	 47.39	0	3731040..3731651	+	203	157962859	-	Spea_3041	-	two component LuxR family transcriptional regulator
3030	 48.73	+1	3731722..3732630	-	302	157962860	-	Spea_3042	-	alpha/beta hydrolase fold
3031	 46.92	0	3732940..3733947	-	335	157962861	-	Spea_3043	-	phosphoserine phosphatase SerB
3032	 44.74	0	3734026..3735138	+	370	157962862	-	Spea_3044	-	membrane protein
3033	 44.44	0	3735219..3735929	-	236	157962863	-	Spea_3045	-	purine nucleoside phosphorylase
3034	 47.04	0	3736028..3737245	-	405	157962864	-	Spea_3046	-	phosphopentomutase
3035	 47.00	0	3737259..3738590	-	443	157962865	-	Spea_3047	-	thymidine phosphorylase
3036	 46.90	0	3738752..3739525	-	257	15796