IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2584	 37.51	-2	3158031..3162341	+	1436	157962414	-	Spea_2593	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
2585	 39.76	-1	3162440..3162766	+	108	157962415	-	Spea_2594	-	hypothetical protein
2586	 36.75	-2	3162781..3162897	+	38	157962416	-	Spea_2595	-	hypothetical protein
2587	 41.03	-1	3162925..3163041	+	38	157962417	-	Spea_2596	-	hypothetical protein
2588	 44.44	0	3163132..3163329	-	65	157962418	-	Spea_2597	-	hypothetical protein
2589	 46.86	0	3163542..3165662	-	706	157962419	-	Spea_2598	-	multifunctional fatty acid oxidation complex subunit alpha
2590	 49.28	+1	3165668..3166978	-	436	157962420	-	Spea_2599	-	3-ketoacyl-CoA thiolase
2591	 48.17	0	3167379..3168335	+	318	157962421	-	Spea_2600	-	ATPase
2592	 49.46	+1	3168335..3169264	+	309	157962422	-	Spea_2601	-	hypothetical protein
2593	 47.17	0	3169265..3169777	+	170	157962423	-	Spea_2602	-	hypothetical protein
2594	 46.98	0	3169771..3170781	+	336	157962424	-	Spea_2603	-	von Willeb