IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2518	 46.35	0	3078453..3079820	+	455	157962348	-	Spea_2527	-	transcriptional regulator
2519	 46.75	0	3079920..3080396	-	158	157962349	-	Spea_2528	-	17 kDa surface antigen
2520	 45.85	0	3080451..3081161	+	236	157962350	-	Spea_2529	-	leucyl/phenylalanyl-tRNA--protein transferase
2521	 43.53	0	3081151..3081876	+	241	157962351	-	Spea_2530	-	arginyl-tRNA-protein transferase
2522	 41.55	-1	3081991..3082209	+	72	157962352	-	Spea_2531	-	translation initiation factor IF-1
2523	 47.72	0	3082342..3084600	-	752	157962353	-	Spea_2532	-	ATP-dependent Clp protease, ATP-binding subunit clpA
2524	 37.86	-2	3084639..3084947	-	102	157962354	-	Spea_2533	-	ATP-dependent Clp protease adaptor protein ClpS
2525	 45.89	0	3085187..3085393	+	68	157962355	-	Spea_2534	-	cold-shock DNA-binding domain-containing protein
2526	 45.39	0	3085561..3087783	-	740	157962356	-	Spea_2535	-	isocitrate dehydrogenase, NADP-dependent
2527	 43.95	0	3088087..3088821	+	244	157962357	-	Spea_2536	-	pseudouridine synthase
2528	 42.83	0	3088832..3089284	+	150