IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2491	 44.67	0	3045122..3045703	+	193	157962321	-	Spea_2500	-	maf protein
2492	 41.80	-1	3045885..3047243	+	452	157962322	-	Spea_2501	-	diguanylate cyclase with PAS/PAC sensor
2493	 42.62	0	3047445..3048047	-	200	157962323	-	Spea_2502	-	HAD family hydrolase
2494	 43.23	0	3048089..3049048	-	319	157962324	-	Spea_2503	-	RluA family pseudouridine synthase
2495	 46.91	0	3049646..3052900	+	1084	157962325	-	Spea_2504	-	ribonuclease
2496	 44.81	0	3053031..3054590	+	519	157962326	-	Spea_2505	-	sulphate transporter
2497	 43.96	0	3054666..3055568	-	300	157962327	-	Spea_2506	-	bifunctional methionine sulfoxide reductase B/A protein
2498	 42.26	0	3056014..3056853	+	279	157962328	-	Spea_2507	-	2OG-Fe(II) oxygenase
2499	 44.94	0	3056971..3057909	+	312	157962329	-	Spea_2508	-	ribosomal biogenesis GTPase
2500	 40.70	-1	3058044..3058532	-	162	157962330	-	Spea_2509	-	protein tyrosine phosphatase
2501	 43.38	0	3058779..3059435	+	218	157962331	-	Spea_2510	-	nitroreducta