IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2437	 45.59	0	2989255..2989515	+	86	157962267	-	Spea_2446	-	cell division topological specificity factor MinE
2438	 41.08	-1	2989575..2990684	-	369	157962268	-	Spea_2447	-	ribonuclease D
2439	 44.48	0	2990779..2992446	-	555	157962269	-	Spea_2448	-	long-chain-fatty-acid--CoA ligase
2440	 44.52	0	2992633..2993508	-	291	157962270	-	Spea_2449	-	alpha/beta hydrolase fold
2441	 43.80	0	2993517..2994347	-	276	157962271	-	Spea_2450	-	hypothetical protein
2442	 47.20	0	2994423..2995136	-	237	157962272	-	Spea_2451	-	hypothetical protein
2443	 45.31	0	2995129..2995437	-	102	157962273	-	Spea_2452	-	hypothetical protein
2444	 48.54	+1	2995486..2996202	-	238	157962274	-	Spea_2453	-	peptidase M22 glycoprotease
2445	 38.73	-1	2996567..2996992	+	141	157962275	-	Spea_2454	-	hypothetical protein
2446	 45.33	0	2996985..2998910	-	641	157962276	-	Spea_2455	-	helicase c2
2447	 44.78	0	2999471..3000370	+	299	157962277	-	Spea_2456	-	ATP phosphoribosyltransferase
2448	 49.5