IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2414	 39.71	-1	2961950..2962702	-	250	157962244	-	Spea_2423	-	integrase catalytic region
2415	 41.60	-1	2962786..2963184	-	132	157962245	-	Spea_2424	-	transposase
2416	 46.00	0	2963294..2963893	-	199	157962246	-	Spea_2425	-	NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome
2417	 46.09	0	2963902..2964387	-	161	157962247	-	Spea_2426	-	nitrate reductase cytochrome c-type subunit (NapB)
2418	 47.95	0	2964400..2966889	-	829	157962248	-	Spea_2427	-	nitrate reductase
2419	 40.70	-1	2966892..2967149	-	85	157962249	-	Spea_2428	-	NapD family protein
2420	 41.51	-1	2967190..2967348	-	52	157962250	-	Spea_2429	-	periplasmic nitrate reductase NapE
2421	 46.42	0	2968293..2972180	-	1295	157962251	-	Spea_2430	-	ATP-dependent helicase HrpA
2422	 46.76	0	2972383..2972799	-	138	157962252	-	Spea_2431	-	signal transduction protein
2423	 35.49	-2	2972942..2973544	-	200	157962253	-	Spea_2432	-	hypothetical protein
2424	 44.30	0	2973836..2974291	-	151