IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2355	 48.28	0	2882188..2882709	-	173	157962185	-	Spea_2364	-	crossover junction endodeoxyribonuclease RuvC
2356	 47.31	0	2882717..2883460	-	247	157962186	-	Spea_2365	-	hypothetical protein
2357	 45.99	0	2883590..2885383	-	597	157962187	-	Spea_2366	-	aspartyl-tRNA synthetase
2358	 42.64	0	2885554..2888325	-	923	157962188	-	Spea_2367	-	diguanylate cyclase
2359	 40.85	-1	2888514..2889245	+	243	157962189	-	Spea_2368	-	putative methyltransferase
2360	 45.12	0	2889242..2890234	+	330	157962190	-	Spea_2369	-	putative methyltransferase
2361	 43.52	0	2890258..2891013	+	251	157962191	-	Spea_2370	-	hypothetical protein
2362	 43.67	0	2891025..2892533	+	502	157962192	-	Spea_2371	-	gonadoliberin III-related protein
2363	 45.74	0	2892533..2893483	+	316	157962193	-	Spea_2372	-	alpha-L-glutamate ligase-like protein
2364	 43.26	0	2893452..2895194	+	580	157962194	-	Spea_2373	-	peptidase M3A and M3B, thimet/oligopeptidase F
2365	 44.29	0	2895139..2896233	+	364	157962195