IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1338	 44.61	0	1634536..1634934	+	132	157961168	-	Spea_1340	-	flagellar basal body rod protein FlgB
1339	 44.84	0	1634937..1635353	+	138	157961169	-	Spea_1341	-	flagellar basal body rod protein FlgC
1340	 47.11	0	1635379..1636191	+	270	157961170	-	Spea_1342	-	flagellar basal body rod modification protein
1341	 47.80	0	1636277..1637638	+	453	157961171	-	Spea_1343	-	flagellar hook protein FlgE
1342	 49.33	+1	1638295..1639038	+	247	157961172	-	Spea_1344	-	flagellar basal body rod protein FlgF
1343	 45.25	0	1639049..1639837	+	262	157961173	-	Spea_1345	-	flagellar basal body rod protein FlgG
1344	 46.94	0	1639881..1640534	+	217	157961174	-	Spea_1346	-	flagellar basal body L-ring protein
1345	 48.58	+1	1640574..1641668	+	364	157961175	-	Spea_1347	-	flagellar basal body P-ring protein
1346	 46.34	0	1641697..1642788	+	363	157961176	-	Spea_1348	-	peptidoglycan hydrolase
1347	 47.79	0	1642832..1644754	+	640	157961177	-	Spea_1349	-	flagellar hook-associated protein FlgK
1348	 45.72	0	1644839..1646041	+	400