IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1326	 43.75	0	1622706..1623185	-	159	157961156	-	Spea_1328	-	hypothetical protein
1327	 46.48	0	1623485..1624237	+	250	157961157	-	Spea_1329	-	methyltransferase type 11
1328	 49.36	+1	1624590..1625843	+	417	157961158	-	Spea_1330	-	sodium:dicarboxylate symporter
1329	 38.75	-1	1625951..1626781	-	276	157961159	-	Spea_1331	-	fatty acid hydroxylase
1330	 46.75	0	1627615..1628784	-	389	157961160	-	Spea_1332	-	hypothetical protein
1331	 45.24	0	1629092..1629721	+	209	157961161	-	Spea_1333	-	hypothetical protein
1332	 49.44	+1	1629722..1630168	+	148	157961162	-	Spea_1334	-	hypothetical protein
1333	 42.02	0	1630556..1630981	-	141	157961163	-	Spea_1335	-	FlgN family protein
1334	 43.40	0	1631078..1631395	-	105	157961164	-	Spea_1336	-	anti-sigma-28 factor, FlgM
1335	 43.80	0	1631493..1632266	-	257	157961165	-	Spea_1337	-	flagellar basal body P-ring biosynthesis protein FlgA
1336	 41.59	-1	1632477..1633397	+	306	157961166	-	Spea_1338	-	response regulator rec