IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1215	 46.31	0	1482595..1483665	+	356	157961045	-	Spea_1217	-	hypothetical protein
1216	 48.21	0	1483957..1484541	+	194	157961046	-	Spea_1218	-	putative lipoprotein
1217	 41.67	-1	1484621..1485064	-	147	157961047	-	Spea_1219	-	OsmC family protein
1218	 46.97	0	1485341..1485868	-	175	157961048	-	Spea_1220	-	hypothetical protein
1219	 42.51	0	1486118..1486444	-	108	157961049	-	Spea_1221	-	hypothetical protein
1220	 46.65	0	1486448..1488091	-	547	157961050	-	Spea_1222	-	PepSY-associated TM helix domain-containing protein
1221	 46.15	0	1488095..1488406	-	103	157961051	-	Spea_1223	-	hypothetical protein
1222	 42.58	0	1488993..1489349	+	118	157961052	-	Spea_1224	-	sigma 54 modulation protein/ribosomal protein S30EA
1223	 48.42	0	1489454..1491382	-	642	157961053	-	Spea_1225	-	potassium efflux system protein
1224	 47.18	0	1491385..1492005	-	206	157961054	-	Spea_1226	-	NAD(P)H dehydrogenase (quinone)
1225	 47.03	0	1492366..1493577	+	403	157961055	-	Spea_1227