IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1131	 44.24	0	1369917..1370246	-	109	157960961	-	Spea_1133	-	translation initiation factor Sui1
1132	 45.35	0	1370648..1370980	-	110	157960962	-	Spea_1134	-	hypothetical protein
1133	 42.83	0	1371140..1371697	+	185	157960963	-	Spea_1135	-	hypothetical protein
1134	 45.16	0	1371822..1372700	-	292	157960964	-	Spea_1136	-	LysR family transcriptional regulator
1135	 44.44	0	1372784..1373197	+	137	157960965	-	Spea_1137	-	transmembrane pair domain-containing protein
1136	 46.04	0	1373454..1375412	+	652	157960966	-	Spea_1138	-	TonB-dependent receptor plug
1137	 46.90	0	1375692..1376288	+	198	157960967	-	Spea_1139	-	OmpA/MotB domain-containing protein
1138	 45.45	0	1376318..1377142	+	274	157960968	-	Spea_1140	-	MscS mechanosensitive ion channel
1139	 43.66	0	1377216..1377854	-	212	157960969	-	Spea_1141	-	hypothetical protein
1140	 45.92	0	1378189..1379205	+	338	157960970	-	Spea_1142	-	threonine aldolase
1141	 44.82	0	1379729..1380616	-	295	157960971	-	Spea