IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1012	 46.13	0	1237298..1238227	+	309	157960842	-	Spea_1014	-	putative radical SAM protein
1013	 42.08	0	1238430..1238795	+	121	157960843	-	Spea_1015	-	Hpt protein
1014	 44.23	0	1238980..1239915	+	311	157960844	-	Spea_1016	-	LysR family transcriptional regulator
1015	 43.62	0	1240325..1241053	-	242	157960845	-	Spea_1017	-	integrase catalytic region
1016	 41.41	-1	1241170..1241553	-	127	157960846	-	Spea_1018	-	transposase
1017	 44.32	0	1241646..1242719	-	357	157960847	-	Spea_1019	-	putative adenylate/guanylate cyclase
1018	 45.83	0	1242845..1243516	-	223	157960848	-	Spea_1020	-	DNA mismatch repair protein
1019	 43.87	0	1244208..1244729	+	173	157960849	-	Spea_1021	-	dinucleoside polyphosphate hydrolase
1020	 46.40	0	1244748..1246982	+	744	157960850	-	Spea_1022	-	phosphoenolpyruvate-protein phosphotransferase PtsP
1021	 47.69	0	1247057..1247857	+	266	157960851	-	Spea_1023	-	hypothetical protein
1022	 43.54	0	1247941..1248792	+	283	157960852	-	Spea_1024