version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 960 49.85 +1 1173970..1174986 + 338 157960790 - Spea_0962 - metalloendopeptidase glycoprotease family 961 46.81 0 1175061..1175735 - 224 157960791 - Spea_0963 - 2OG-Fe(II) oxygenase 962 51.66 +1 1176000..1176572 - 190 157960792 - Spea_0964 - putative glycerol-3-phosphate acyltransferase PlsY 963 44.63 0 1176911..1177264 + 117 157960793 - Spea_0965 - dihydroneopterin aldolase 964 44.31 0 1177265..1177756 + 163 157960794 - Spea_0966 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 965 46.44 0 1177781..1178581 + 266 157960795 - Spea_0967 - undecaprenyl pyrophosphate phosphatase 966 45.80 0 1178635..1179468 + 277 157960796 - Spea_0968 - rRNA (guanine-N(1)-)-methyltransferase 967 49.12 +1 1179521..1180432 + 303 157960797 - Spea_0969 - ErfK/YbiS/YcfS/YnhG family protein 968 43.82 0 1180629..1180895 - 88 157960798 - Spea_0970 - major outer membrane lipoprotein, putative 969 48.10 0 1181112..1182350 - 412 157960799 - Spea_0971 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase 970 47.29 0 1182757..1184433 + 558 157960800 - Spea_0972 - peptidoglycan binding domain-containing protein 971 49.40 +1 1184433..1185509 + 358 157960801 - Spea_0973 - general secretion pathway protein B 972 47.36 0 1185605..1186894 - 429 157960802 - Spea_0974 - glutamate-1-semialdehyde-2,1-aminomutase 973 45.39 0 1186922..1187941 - 339 157960803 - Spea_0975 - aspartate carbamoyltransferase 974 46.32 0 1188205..1189020 + 271 157960804 - Spea_0976 - prolipoprotein diacylglyceryl transferase 975 46.87 0 1189129..1191285 - 718 157960805 - Spea_0977 - TonB-dependent receptor 976 46.38 0 1191649..1192713 - 354 157960806 - Spea_0978 - uncharacterized FlgJ-related protein-like protein 977 46.23 0 1193085..1193495 - 136 157960807 - Spea_0979 - cytochrome c class I 978 47.44 0 1193497..1193886 - 129 157960808 - Spea_0980 - hypothetical protein 979 48.66 +1 1193886..1195112 - 408 157960809 - Spea_0981 - oxidoreductase molybdopterin binding 980 43.30 0 1195112..1195432 - 106 157960810 - Spea_0982 - cytochrome c class I 981 45.99 0 1196074..1197795 - 573 157960811 - Spea_0983 - chloride channel core 982 44.15 0 1197857..1198660 + 267 157960812 - Spea_0984 - hypothetical protein 983 45.30 0 1198653..1199003 + 116 157960813 - Spea_0985 - iron-sulfur cluster insertion protein ErpA 984 44.53 0 1199079..1199471 - 130 157960814 - Spea_0986 - hypothetical protein 985 43.57 0 1199704..1200084 - 126 157960815 - Spea_0987 - hypothetical protein 986 50.28 +1 1200210..1200917 - 235 157960816 - Spea_0988 - aquaporin Z 987 49.00 +1 1201053..1202495 - 480 157960817 - Spea_0989 - alkaline phosphatase 988 48.08 0 1202509..1205031 - 840 157960818 - Spea_0990 - peptidase S9 prolyl oligopeptidase 989 45.46 0 1205124..1207901 - 925 157960819 - Spea_0991 - TonB-dependent receptor 990 46.60 0 1208255..1210402 + 715 157960820 - Spea_0992 - winged helix family two component response transcriptional regulator 991 50.54 +1 1210630..1211739 - 369 157960821 - Spea_0993 - anhydro-N-acetylmuramic acid kinase 992 45.44 0 1211799..1213211 - 470 157960822 - Spea_0994 - peptidase M23B 993 46.70 0 1213339..1214535 + 398 157960823 - Spea_0995 - tyrosyl-tRNA synthetase 994 46.23 0 1214613..1215023 - 136 157960824 - Spea_0996 - hypothetical protein 995 45.00 0 1215242..1215721 - 159 157960825 - Spea_0997 - hypothetical protein 996 47.60 0 1215721..1216344 - 207 157960826 - Spea_0998 - hypothetical protein 997 41.54 -1 1216341..1216730 - 129 157960827 - Spea_0999 - hypothetical protein 998 47.81 0 1216887..1217867 - 326 157960828 - Spea_1000 - cobalamin biosynthesis protein CbiB 999 47.33 0 1217954..1218646 - 230 157960829 - Spea_1001 - adenosylhomocysteine nucleosidase 1000 39.34 -1 1219028..1220359 + 443 157960830 - Spea_1002 - diguanylate cyclase 1001 48.90 +1 1220434..1220889 + 151 157960831 - Spea_1003 - GCN5-related N-acetyltransferase 1002 47.47 0 1220902..1221375 - 157 157960832 - Spea_1004 - MarR family transcriptional regulator 1003 47.52 0 1221568..1222272 - 234 157960833 - Spea_1005 - hypothetical protein 1004 46.88 0 1222292..1223509 - 405 157960834 - Spea_1006 - putative transporter, BCCT family protein 1005 49.71 +1 1223842..1225539 - 565 157960835 - Spea_1007 - choline dehydrogenase 1006 50.48 +1 1225549..1227012 - 487 157960836 - Spea_1008 - betaine aldehyde dehydrogenase 1007 49.01 +1 1227003..1227608 - 201 157960837 - Spea_1009 - transcriptional regulator BetI 1008 42.87 0 1228104..1229078 + 324 157960838 - Spea_1010 - inosine/uridine-preferring nucleoside hydrolase 1009 42.19 0 1229331..1230527 - 398 157960839 - Spea_1011 - ribokinase-like domain-containing protein 1010 50.92 +1 1230944..1232353 - 469 157960840 - Spea_1012 - glutamate synthase subunit beta 1011 49.36 +1 1232360..1236808 - 1482 157960841 - Spea_1013 - glutamate synthase subunit alpha 1012 46.13 0 1237298..1238227 + 309 157960842 - Spea_1014 - putative radical SAM protein 1013 42.08 0 1238430..1238795 + 121 157960843 - Spea_1015 - Hpt protein 1014 44.23 0 1238980..1239915 + 311 157960844 - Spea_1016 - LysR family transcriptional regulator 1015 43.62 0 1240325..1241053 - 242 157960845 - Spea_1017 - integrase catalytic region 1016 41.41 -1 1241170..1241553 - 127 157960846 - Spea_1018 - transposase 1017 44.32 0 1241646..1242719 - 357 157960847 - Spea_1019 - putative adenylate/guanylate cyclase 1018 45.83 0 1242845..1243516 - 223 157960848 - Spea_1020 - DNA mismatch repair protein 1019 43.87 0 1244208..1244729 + 173 157960849 - Spea_1021 - dinucleoside polyphosphate hydrolase 1020 46.40 0 1244748..1246982 + 744 157960850 - Spea_1022 - phosphoenolpyruvate-protein phosphotransferase PtsP 1021 47.69 0 1247057..1247857 + 266 157960851 - Spea_1023 - hypothetical protein 1022 43.54 0 1247941..1248792 + 283 157960852 - Spea_1024 - thymidylate synthase 1023 44.30 0 1249284..1250459 + 391 157960853 - Spea_1025 - Na+/H+ antiporter NhaA 1024 44.27 0 1250456..1250839 + 127 157960854 - Spea_1026 - hypothetical protein 1025 42.35 0 1250909..1251817 + 302 157960855 - Spea_1027 - transcriptional activator NhaR 1026 43.33 0 1251978..1252217 + 79 157960856 - Spea_1028 - hypothetical protein 1027 43.41 0 1252198..1252614 + 138 157960857 - Spea_1029 - hypothetical protein 1028 48.23 0 1252672..1254282 - 536 157960858 - Spea_1030 - L-aspartate oxidase 1029 45.60 0 1254502..1255080 + 192 157960859 - Spea_1031 - RNA polymerase sigma factor RpoE 1030 45.87 0 1255104..1255709 + 201 157960860 - Spea_1032 - anti sigma-E protein, RseA 1031 47.27 0 1255722..1256654 + 310 157960861 - Spea_1033 - sigma E regulatory protein, MucB/RseB 1032 43.87 0 1256668..1257132 + 154 157960862 - Spea_1034 - positive regulator of sigma E, RseC/MucC 1033 43.66 0 1257261..1259051 + 596 157960863 - Spea_1035 - GTP-binding protein LepA 1034 44.66 0 1259192..1260109 + 305 157960864 - Spea_1036 - signal peptidase I 1035 43.81 0 1260111..1260788 + 225 157960865 - Spea_1037 - ribonuclease III 1036 45.52 0 1260785..1261777 + 330 157960866 - Spea_1038 - GTP-binding protein Era 1037 46.38 0 1261937..1262626 + 229 157960867 - Spea_1039 - DNA repair protein RecO 1038 47.70 0 1262750..1263487 + 245 157960868 - Spea_1040 - pyridoxal phosphate biosynthetic protein PdxJ 1039 48.74 +1 1263587..1263982 + 131 157960869 - Spea_1041 - holo-acyl-carrier-protein synthase 1040 43.15 0 1263996..1264484 - 162 157960870 - Spea_1042 - GCN5-related N-acetyltransferase 1041 43.95 0 1264914..1265855 - 313 157960871 - Spea_1043 - Dyp-type peroxidase family protein 1042 42.97 0 1266453..1267511 + 352 157960872 - Spea_1044 - hypothetical protein 1043 41.57 -1 1267843..1268376 + 177 157960873 - Spea_1045 - hypothetical protein 1044 44.31 0 1268473..1269756 - 427 157960874 - Spea_1046 - hypothetical protein 1045 46.13 0 1269902..1270690 - 262 157960875 - Spea_1047 - cytochrome c assembly protein 1046 47.45 0 1271098..1272471 + 457 157960876 - Spea_1048 - signal recognition particle protein 1047 48.81 +1 1272689..1272940 + 83 157960877 - Spea_1049 - 30S ribosomal protein S16 1048 44.26 0 1272961..1273491 + 176 157960878 - Spea_1050 - 16S rRNA-processing protein 1049 47.12 0 1273507..1274253 + 248 157960879 - Spea_1051 - tRNA (guanine-N(1)-)-methyltransferase 1050 46.05 0 1274290..1274643 + 117 157960880 - Spea_1052 - 50S ribosomal protein L19 1051 46.34 0 1275021..1276112 + 363 157960881 - Spea_1053 - phospho-2-dehydro-3-deoxyheptonate aldolase 1052 46.06 0 1276112..1277266 + 384 157960882 - Spea_1054 - bifunctional chorismate mutase/prephenate dehydrogenase 1053 45.17 0 1277672..1279336 + 554 157960883 - Spea_1055 - hydroxylamine reductase 1054 45.87 0 1279439..1280563 + 374 157960884 - Spea_1056 - oxidoreductase FAD-binding subunit 1055 48.38 0 1280747..1281085 + 112 157960885 - Spea_1057 - hypothetical protein 1056 43.05 0 1281133..1282419 + 428 157960886 - Spea_1058 - sodium/hydrogen exchanger 1057 45.04 0 1282497..1284470 - 657 157960887 - Spea_1059 - chorismate mutase 1058 41.32 -1 1284778..1285140 - 120 157960888 - Spea_1060 - sigma 54 modulation protein/ribosomal protein S30EA 1059 44.30 0 1285450..1286142 + 230 157960889 - Spea_1061 - cytochrome B561 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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