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Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2659 54.81 0 3000407..3000676 + 89 30064236 - S3113 - putative DNA-binding protein 2660 56.82 +1 3000699..3001277 + 192 30064237 - S3114 - putative inner membrane protein 2661 56.63 +1 3001278..3001586 + 102 30064238 - S3115 - lipoprotein 2662 54.64 0 3001587..3001985 + 132 30064239 - S3116 - lipoprotein 2663 54.28 0 3001973..3002650 + 225 30064240 - S3117 - putative ATP-binding protein of ABC transport system 2664 52.95 0 3002644..3003321 + 225 30064241 - S3118 - putative ATP-binding protein of ABC transport system 2665 48.24 0 3004003..3004512 - 169 30064242 yggD S3120 - putative DNA-binding transcriptional regulator 2666 56.21 +1 3004534..3005499 - 321 30064243 yggF S3121 - fructose-1,6-bisphosphatase II-like protein 2667 52.32 0 3005496..3006485 - 329 30064244 - S3122 - putative oxidoreductase 2668 52.58 0 3006739..3007242 - 167 30064245 - S3124 - IS1 orfB 2669 52.17 0 3007161..3007436 - 91 30064246 - S3125 - IS1 orfA 2670 48.84 0 3007927..3008835 + 302 30064247 - S3126 - putative serine protease 2671 56.07 +1 3008881..3010872 - 663 30064248 tktA S3127 - transketolase 2672 52.09 0 3011024..3011908 + 294 30064249 yggG S3128 - hypothetical protein 2673 55.59 0 3012114..3013034 - 306 30064250 speB S3129 - agmatinase 2674 50.13 0 3013170..3013544 - 124 30064251 - S3130 - lipoprotein 2675 52.58 0 3013570..3014073 - 167 30064252 - S3131 - IS1 orfB 2676 52.54 0 3013992..3014267 - 91 30064253 - S3132 - IS1 orfA 2677 53.82 0 3014414..3016390 - 658 30064254 speA S3133 - arginine decarboxylase 2678 40.82 -2 3016399..3016545 - 48 30064255 yqgB S3134 - hypothetical protein 2679 48.61 0 3016666..3016881 + 71 30064256 yqgC S3135 - hypothetical protein 2680 43.25 -2 3016878..3017129 - 83 30064257 yqgD S3136 - hypothetical protein 2681 53.25 0 3017185..3018339 + 384 30064258 metK S3137 - S-adenosylmethionine synthetase 2682 53.32 0 3018815..3020170 + 451 30064259 galP S3138 - major facilitator superfamily galactose-proton symporter 2683 55.22 0 3020247..3020744 + 165 30064260 sprT S3139 - hypothetical protein 2684 54.52 0 3020839..3021546 + 235 30064261 endA S3140 - DNA-specific endonuclease I 2685 53.01 0 3021626..3022357 + 243 30064262 yggJ S3141 - hypothetical protein 2686 53.52 0 3022370..3023320 + 316 30064263 gshB S3142 - glutathione synthetase 2687 51.42 0 3023429..3023992 + 187 161486443 yqgE S3143 - hypothetical protein 2688 53.24 0 3023992..3024408 + 138 30064265 yqgF S3144 - Holliday junction resolvase-like protein 2689 54.09 0 3024584..3025609 - 341 30064266 yggR S3146 - putative transport protein 2690 51.21 0 3025582..3026286 + 234 30064267 yggS S3145 - hypothetical protein 2691 51.32 0 3026304..3026870 + 188 30064268 yggT S3147 - putative resistance protein 2692 48.11 0 3026867..3027157 + 96 161486442 yggU S3148 - hypothetical protein 2693 55.72 +1 3027165..3027758 + 197 30064270 yggV S3149 - putative deoxyribonucleotide triphosphate pyrophosphatase 2694 52.33 0 3027751..3028887 + 378 30064271 yggW S3150 - coproporphyrinogen III oxidase 2695 42.66 -2 3029201..3029554 + 117 30064272 - S3151 - hypothetical protein 2696 42.09 -2 3029571..3030164 + 197 30064273 - S3152 - hypothetical protein 2697 43.25 -2 3030209..3030712 + 167 30064274 - S3153 - hypothetical protein 2698 52.90 0 3031144..3031419 - 91 30064275 - S3154 - IS1 orfA 2699 46.01 -1 3031476..3032777 + 433 30064276 - S3155 - hypothetical protein 2700 44.76 -1 3032878..3033840 - 320 30064277 yggM S3156 - putative alpha helix chain 2701 52.53 0 3033957..3035003 - 348 30064278 ansB S3157 - L-asparaginase II 2702 52.72 0 3035179..3035895 - 238 30064279 yggN S3158 - hypothetical protein 2703 48.32 0 3036082..3036408 - 108 161486441 yggL S3159 - hypothetical protein 2704 52.64 0 3036408..3037127 - 239 30064281 trmB S3160 - tRNA (guanine-N(7))-methyltransferase 2705 55.56 0 3037288..3038340 + 350 30064282 mutY S3161 - adenine DNA glycosylase 2706 47.46 -1 3038368..3038643 + 91 30064283 yggX S3162 - hypothetical protein 2707 50.88 0 3038705..3039787 + 360 30064284 mltC S3163 - murein transglycosylase C 2708 49.58 0 3039941..3041245 + 434 30064285 nupG S3164 - permease protein for nucleosides 2709 52.00 0 3041294..3043489 - 731 30064286 speC S3165 - ornithine decarboxylase 2710 51.55 0 3043827..3044534 + 235 30064287 yqgA S3166 - putative transport protein 2711 48.77 0 3044913..3046175 + 420 30064288 - S4822 - putative P4-type integrase 2712 47.16 -1 3046628..3050143 + 1171 30064289 - S3169 - superfamily I DNA helicase 2713 56.56 +1 3051492..3052253 + 253 30064290 - S4823 - hypothetical protein 2714 41.76 -2 3052614..3056471 + 1285 30064291 sigA S4824 - serine protease 2715 52.51 0 3059545..3059763 + 72 30064292 - S3177 - hypothetical protein 2716 51.20 0 3059914..3063126 - 1070 30064293 pic S3178 - serine protease precurser 2717 51.44 0 3064760..3065593 - 277 30064294 - S3180 - reverse transcriptase-like protein 2718 55.95 +1 3065587..3066267 - 226 30064295 - S3181 - reverse transcriptase-like protein 2719 53.21 0 3067353..3067679 - 108 30064296 - S3184 - IS629 orfA 2720 51.64 0 3067962..3068387 - 141 30064297 - S3185 - hypothetical protein 2721 55.21 0 3068384..3068767 - 127 30064298 - S3186 - hypothetical protein 2722 48.50 0 3069140..3069739 - 199 30064299 - S3187 - hypothetical protein 2723 53.01 0 3070456..3070821 + 121 161486440 - S3188 - insertion sequence 2 OrfA protein 2724 55.08 0 3070779..3071684 + 301 161486439 - S3189 - insertion element IS2 transposase InsD 2725 53.62 0 3073538..3073744 + 68 30064302 - S3190 - hypothetical protein 2726 51.83 0 3073830..3074402 + 190 30064303 - S3191 - hypothetical protein 2727 47.02 -1 3074404..3074688 - 94 30064304 - S4825 - hypothetical protein 2728 37.45 -2 3075971..3076990 + 339 30064305 - S4826 - hypothetical protein 2729 57.96 +1 3077100..3077972 + 290 30064306 sap S3193 - hypothetical protein 2730 56.26 +1 3078306..3079199 + 297 30064307 - S3194 - outer membrane fluffing protein 2731 58.51 +1 3079305..3081425 + 706 30064308 - S3195 - outer membrane fluffing protein 2732 52.24 0 3081546..3084062 + 838 30064309 - S3196 - hypothetical protein 2733 48.03 0 3084138..3084593 + 151 30064310 - S3197 - hypothetical protein 2734 56.78 +1 3085004..3085822 + 272 30064311 - S3199 - hypothetical protein 2735 55.70 +1 3086164..3086637 + 157 30064312 - S3200 - hypothetical protein 2736 58.33 +1 3086638..3087129 + 163 30064313 yeeS S3201 - RADC family DNA repair protein 2737 52.70 0 3087216..3087437 + 73 30064314 yeeT S3202 - hypothetical protein 2738 60.85 +2 3087517..3087894 + 125 30064315 yeeU S3203 - putative structural protein 2739 54.76 0 3087941..3088318 + 125 30064316 yeeV S3204 - hypothetical protein 2740 53.99 0 3088315..3088803 + 162 30064317 yeeW S3205 - hypothetical protein 2741 47.92 0 3089105..3089947 + 280 30064318 - S3207 - hypothetical protein 2742 50.33 0 3091372..3091671 + 99 30064319 - S3209 - IS3 orfA 2743 55.02 0 3091668..3092534 + 288 30064320 - S3210 - IS3 orfB 2744 42.92 -2 3093171..3093410 - 79 30064321 - S3211 - hypothetical protein 2745 41.58 -2 3093545..3094150 - 201 30064322 - S3212 - hypothetical protein 2746 52.98 0 3094265..3094768 - 167 30064323 - S3213 - IS1 orfB 2747 52.90 0 3094687..3094962 - 91 30064324 - S3214 - IS1 orfA 2748 52.55 0 3096365..3097951 - 528 30064325 yghK S3215 - putative permease 2749 53.50 0 3098306..3100477 - 723 30064326 glcB S3216 - malate synthase G 2750 54.81 0 3100499..3100903 - 134 30064327 glcG S3217 - hypothetical protein 2751 54.99 0 3104940..3105710 + 256 30064328 glcC S3220 - DNA-binding transcriptional regulator GlcC 2752 52.93 0 3107379..3109067 + 562 30064329 - S3222 - acyl-CoA synthetase 2753 54.63 0 3109082..3109978 + 298 30064330 - S3223 - hypothetical protein 2754 40.56 -2 3110011..3110259 + 82 30064331 - S3224 - hypothetical protein 2755 50.71 0 3110259..3110609 + 116 30064332 - S3225 - putative class II aminotransferase 2756 52.72 0 3110642..3111430 + 262 30064333 - S3226 - putative class II aminotransferase 2757 51.30 0 3111466..3112545 - 359 30064334 - S3227 - hypothetical protein 2758 51.26 0 3112542..3113612 - 356 30064335 - S3228 - hypothetical protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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