version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2309 60.89 +2 2601934..2602158 - 74 30063885 - S2706 - hypothetical protein 2310 67.48 +2 2602155..2602892 - 245 30063886 parA S2707 - resolvase 2311 62.16 +2 2603040..2603372 + 110 30063887 - S2708 - putative transcriptional regulator 2312 62.11 +2 2603369..2604136 + 255 30063888 - S2709 - putative arsenical resistance protein 2313 60.55 +2 2604133..2604639 + 168 30063889 - S2710 - arsenate reductase 2314 62.83 +2 2604636..2605703 + 355 30063890 - S2711 - putative sodium bile acid symporter family protein 2315 60.12 +2 2606599..2607087 - 162 30063891 - S2715 - hypothetical protein 2316 53.04 0 2607237..2608043 - 268 30063892 trbL S2716 - putative mating pair formation protein 2317 59.87 +2 2608282..2609061 - 259 30063893 trbJ S2718 - putative mating pair formation protein 2318 52.38 0 2609202..2609390 - 62 30063894 - S2719 - putative stabilization protein 2319 59.07 +1 2610423..2611304 - 293 30063895 repC S2720 - putative replication protein C 2320 55.68 +1 2611291..2612118 - 275 30063896 - S2721 - putative DNA helicase 2321 50.00 0 2612123..2612344 - 73 30063897 - S2722 - hypothetical protein 2322 58.02 +1 2612492..2613694 - 400 30063898 - S2723 - putative integrase 2323 53.99 0 2613999..2615576 - 525 30063899 guaA S2725 - bifunctional GMP synthase/glutamine amidotransferase protein 2324 54.33 0 2615645..2617111 - 488 30063900 guaB S2726 - inositol-5-monophosphate dehydrogenase 2325 53.25 0 2617273..2618643 + 456 30063901 xseA S2727 - exodeoxyribonuclease VII large subunit 2326 47.22 -1 2618640..2618891 - 83 30063902 - S2728 - hypothetical protein 2327 52.21 0 2618925..2620397 - 490 30063903 engA S2729 - GTP-binding protein EngA 2328 53.35 0 2620515..2621693 - 392 30063904 - S2730 - outer membrane protein assembly complex subunit YfgL 2329 49.92 0 2621704..2622324 - 206 30063905 - S2731 - hypothetical protein 2330 54.35 0 2622342..2623616 - 424 30063906 hisS S2732 - histidyl-tRNA synthetase 2331 53.19 0 2623719..2624846 - 375 30063907 ispG S2733 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2332 54.34 0 2624873..2625886 - 337 30063908 yfgA S2734 - hypothetical protein 2333 52.73 0 2626171..2627325 - 384 30063909 yfgB S2735 - hypothetical protein 2334 52.55 0 2627475..2627906 - 143 30063910 ndk S2736 - nucleoside diphosphate kinase 2335 57.81 +1 2630171..2631367 - 398 30063911 - S2738 - ISSfl4 orf 2336 47.23 -1 2632898..2633674 - 258 30063912 sseB S2741 - enhanced serine sensitivity protein SseB 2337 56.07 +1 2633816..2635099 - 427 30063913 pepB S2742 - aminopeptidase B 2338 50.75 0 2635158..2635358 - 66 30063914 yfhJ S2743 - hypothetical protein 2339 52.68 0 2635370..2635705 - 111 30063915 fdx S2744 - [2FE-2S] ferredoxin, electron carrer protein 2340 57.59 +1 2635707..2637557 - 616 30063916 hscA S2745 - chaperone protein HscA 2341 51.94 0 2637574..2638089 - 171 30063917 hscB S2746 - co-chaperone HscB 2342 50.62 0 2638185..2638508 - 107 30063918 iscA S2747 - iron-sulfur cluster assembly protein 2343 49.35 0 2638525..2638911 - 128 30063919 - S2748 - scaffold protein 2344 53.25 0 2638939..2640153 - 404 30063920 yfhO S2749 - cysteine desulfurase 2345 53.78 0 2640265..2640753 - 162 30063921 - S2750 - DNA-binding transcriptional regulator IscR 2346 54.79 0 2641023..2641763 - 246 30063922 - S2751 - putative ATP synthase beta subunit 2347 53.86 0 2641882..2642685 + 267 30063923 suhB S2752 - inositol monophosphatase 2348 50.41 0 2642830..2643684 + 284 30063924 - S2753 - putative enzyme 2349 51.44 0 2643875..2645155 + 426 30063925 csiE S2754 - stationary phase inducible protein CsiE 2350 56.40 +1 2645147..2646286 - 379 30063926 hcaT S2755 - putative 3-phenylpropionic acid transporter 2351 49.94 0 2646446..2647336 - 296 30063927 hcaR S2756 - DNA-binding transcriptional regulator HcaR 2352 53.08 0 2647472..2648833 + 453 30063928 hcaA1 S2757 - large terminal subunit of phenylpropionate dioxygenase 2353 52.79 0 2648830..2649348 + 172 30063929 hcaA2 S2758 - 3-phenylpropionate dioxygenase subunit beta 2354 55.45 0 2649348..2649668 + 106 30063930 hcaC S2759 - 3-phenylpropionate dioxygenase ferredoxin subunit 2355 56.09 +1 2649665..2650477 + 270 30063931 hcaB S2760 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2356 48.89 0 2651734..2652228 + 164 30063932 yphA S2762 - hypothetical protein 2357 55.10 0 2652276..2653148 - 290 30063933 yphB S2763 - hypothetical protein 2358 54.16 0 2653160..2654254 - 364 30063934 yphC S2764 - putative oxidoreductase 2359 55.26 0 2654287..2655285 - 332 30063935 yphD S2765 - putative transport system permease protein 2360 55.16 0 2655310..2656821 - 503 30063936 yphE S2766 - putative ATP-binding component of a transport system 2361 51.26 0 2661322..2662515 + 397 30063937 yphH S2769 - putative NAGC-like transcriptional regulator 2362 53.11 0 2662713..2663966 - 417 30063938 glyA S2770 - serine hydroxymethyltransferase 2363 52.39 0 2664293..2665483 + 396 30063939 hmpA S2771 - nitric oxide dioxygenase 2364 51.03 0 2665528..2665866 - 112 30063940 glnB S2772 - nitrogen regulatory protein P-II 1 2365 54.31 0 2665927..2667261 - 444 30063941 yfhA S2773 - putative 2-component transcriptional regulator 2366 54.34 0 2667251..2667964 - 237 30063942 yfhG S2774 - hypothetical protein 2367 52.38 0 2668129..2669619 - 496 30063943 yfhK S2775 - putative 2-component sensor protein 2368 56.64 +1 2670114..2674001 - 1295 30063944 purL S2776 - phosphoribosylformylglycinamidine synthase 2369 50.39 0 2674398..2675816 + 472 30063945 yfhD S2777 - putative transglycosylase 2370 54.00 0 2675813..2676349 - 178 30063946 yfhC S2778 - tRNA-specific adenosine deaminase 2371 52.52 0 2676374..2677009 - 211 161486454 yfhB S2779 - hypothetical protein 2372 51.83 0 2677218..2678066 + 282 161486453 yfhH S2780 - putative DNA-binding transcriptional regulator 2373 49.89 0 2678519..2678959 - 146 30063949 - S2781 - DNA-invertase 2374 46.36 -1 2679457..2681283 + 608 30063950 ipaH_7 S2782 - invasion plasmid antigen 2375 56.96 +1 2681284..2681829 - 181 30063951 - S2783 - hypothetical protein 2376 53.33 0 2681874..2683163 - 429 30063952 - S2784 - putative tail fiber protein 2377 49.69 0 2683187..2683675 - 162 30063953 - S2785 - putative tail fiber assembly protein 2378 45.95 -1 2683735..2683845 - 36 30063954 - S2786 - putative tail fiber protein 2379 53.01 0 2684317..2684682 + 121 161486452 - S2787 - insertion sequence 2 OrfA protein 2380 55.19 0 2684640..2685545 + 301 161486451 - S2788 - insertion element IS2 transposase InsD 2381 51.17 0 2685470..2686456 - 328 30063957 - S2789 - putative tail fiber protein 2382 49.83 0 2686443..2687048 - 201 30063958 - S2790 - hypothetical protein 2383 52.14 0 2687050..2687517 - 155 30063959 - S2791 - putative bacteriophage protein 2384 45.87 -1 2687812..2688114 + 100 30063960 - S2793 - IS600 orfA 2385 52.24 0 2688255..2688968 + 237 30063961 - S2794 - IS600 orfB 2386 51.75 0 2689009..2689665 - 218 30063962 - S2795 - hypothetical protein 2387 51.49 0 2689707..2690108 - 133 30063963 - S2796 - hypothetical protein 2388 43.68 -1 2690323..2690583 + 86 30063964 yfhL S2797 - hypothetical protein 2389 50.39 0 2691277..2691657 - 126 30063965 acpS S2798 - 4'-phosphopantetheinyl transferase 2390 55.33 0 2691657..2692388 - 243 30063966 pdxJ S2799 - pyridoxal phosphate biosynthetic protein PdxJ 2391 53.36 0 2692400..2693128 - 242 30063967 recO S2800 - DNA repair protein RecO 2392 52.54 0 2693140..2694045 - 301 30063968 era S2801 - GTP-binding protein Era 2393 50.81 0 2694042..2694722 - 226 30063969 rnc S2802 - ribonuclease III 2394 52.00 0 2694994..2695968 - 324 30063970 lepB S2803 - lsignal peptidase I 2395 53.67 0 2695984..2697783 - 599 30063971 lepA S2804 - GTP-binding protein LepA 2396 55.83 +1 2697981..2698460 - 159 30063972 rseC S2805 - SoxR reducing system protein RseC 2397 50.78 0 2698457..2699413 - 318 30063973 rseB S2806 - periplasmic negative regulator of sigmaE 2398 51.92 0 2699413..2700063 - 216 30063974 rseA S2807 - anti-RNA polymerase sigma factor SigE 2399 48.96 0 2700096..2700671 - 191 30063975 rpoE S2808 - RNA polymerase sigma factor RpoE 2400 52.56 0 2702686..2703543 - 285 30063976 yfiC S2810 - putative enzyme 2401 54.91 0 2703555..2704889 + 444 30063977 srmB S2811 - ATP-dependent RNA helicase SrmB 2402 48.11 0 2704924..2705850 - 308 30063978 yfiE S2812 - putative LYSR-type transcriptional regulator 2403 51.19 0 2705908..2706495 + 195 30063979 yfiK S2813 - neutral amino-acid efflux protein 2404 47.66 0 2706551..2706934 - 127 30063980 yfiD S2814 - autonomous glycyl radical cofactor GrcA 2405 52.03 0 2707239..2707928 + 229 30063981 ung S2815 - uracil-DNA glycosylase 2406 56.55 +1 2707976..2709013 - 345 30063982 yfiF S2816 - putative methyltransferase 2407 49.52 0 2709220..2709639 + 139 30063983 trxC S2817 - thioredoxin 2 2408 52.01 0 2709684..2710406 + 240 30063984 yfiP S2818 - hypothetical protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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