version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2102 55.79 +1 2350476..2351735 + 419 30063676 glpB S2457 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 2103 53.82 0 2351732..2352922 + 396 30063677 glpC S2458 - sn-glycerol-3-phosphate dehydrogenase subunit C 2104 47.63 0 2353115..2354065 + 316 30063678 yfaD S2459 - hypothetical protein 2105 55.20 0 2354106..2354576 - 156 30063679 - S2460 - hypothetical protein 2106 54.11 0 2354631..2355833 - 400 30063680 - S2461 - competence damage-inducible protein A 2107 53.59 0 2355920..2356462 - 180 30063681 - S2462 - hypothetical protein 2108 47.93 0 2356804..2357166 + 120 30063682 yfaO S2463 - hypothetical protein 2109 43.18 -2 2357205..2357783 - 192 30063683 ais S2464 - protein induced by aluminum 2110 51.84 0 2358115..2359254 + 379 161486464 - S2465 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2111 49.54 0 2359258..2360226 + 322 30063685 - S2466 - undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2112 51.32 0 2360657..2362207 + 516 30063686 ybfG S2467 - hypothetical protein 2113 52.75 0 2362204..2363094 + 296 30063687 - S2468 - hypothetical protein 2114 51.12 0 2363094..2364746 + 550 30063688 arnT S2469 - 4-amino-4-deoxy-L-arabinose transferase 2115 53.27 0 2364743..2365078 + 111 30063689 - S2567 - sucrose-6 phosphate hydrolase 2116 47.80 0 2365078..2365464 + 128 161486463 - S2471 - hypothetical protein 2117 56.19 +1 2365835..2367190 - 451 30063691 menE S2473 - O-succinylbenzoic acid--CoA ligase 2118 59.19 +1 2367187..2368149 - 320 30063692 menC S2474 - O-succinylbenzoate synthase 2119 55.13 0 2368149..2369006 - 285 30063693 menB S2475 - naphthoate synthase 2120 56.13 +1 2369021..2369779 - 252 30063694 yfbB S2476 - acyl-CoA thioester hydrolase YfbB 2121 57.93 +1 2369776..2371446 - 556 30063695 menD S2477 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 2122 53.63 0 2371535..2372830 - 431 161486462 menF S2478 - menaquinone-specific isochorismate synthase 2123 51.96 0 2372909..2373214 - 101 30063697 elaB S2479 - hypothetical protein 2124 47.62 0 2373269..2373730 - 153 30063698 elaA S2480 - hypothetical protein 2125 50.65 0 2373795..2374712 + 305 161486461 elaC S2481 - ribonuclease Z 2126 52.90 0 2375148..2375423 + 91 30063700 - S2482 - IS1 orfA 2127 53.37 0 2375342..2375845 + 167 30063701 - S2483 - IS1 orfB 2128 57.27 +1 2377618..2379075 - 485 161486460 nuoN S2487 - NADH dehydrogenase subunit N 2129 54.97 0 2379082..2380611 - 509 30063703 nuoM S2488 - NADH dehydrogenase subunit M 2130 57.00 +1 2380775..2382616 - 613 30063704 nuoL S2489 - NADH dehydrogenase subunit L 2131 54.46 0 2382613..2382915 - 100 30063705 nuoK S2490 - NADH dehydrogenase subunit K 2132 54.05 0 2382912..2383466 - 184 30063706 nuoJ S2491 - NADH dehydrogenase subunit J 2133 53.78 0 2383478..2384020 - 180 30063707 nuoI S2492 - NADH dehydrogenase subunit I 2134 54.40 0 2384035..2385012 - 325 30063708 nuoH S2493 - NADH dehydrogenase subunit H 2135 56.29 +1 2385009..2387735 - 908 30063709 nuoG S2494 - NADH dehydrogenase subunit G 2136 56.58 +1 2387788..2389125 - 445 30063710 nuoF S2495 - NADH dehydrogenase I subunit F 2137 55.29 0 2389122..2389622 - 166 30063711 nuoE S2496 - NADH dehydrogenase subunit E 2138 55.80 +1 2389625..2391427 - 600 30063712 nuoC S2497 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2139 51.89 0 2391521..2392183 - 220 30063713 nuoB S2498 - NADH dehydrogenase subunit B 2140 53.38 0 2392199..2392642 - 147 30063714 nuoA S2499 - NADH dehydrogenase subunit A 2141 49.84 0 2393273..2394211 - 312 30063715 lrhA S2500 - LysR family NADH dehydrogenase transcriptional regulator 2142 50.41 0 2395130..2396347 + 405 30063716 - S2501 - aminotransferase AlaT 2143 49.67 0 2396431..2397030 + 199 30063717 - S2502 - hypothetical protein 2144 52.43 0 2397089..2398921 - 610 30063718 yfbS S2503 - putative transport protein 2145 56.07 +1 2399008..2399658 - 216 30063719 yfbT S2504 - putative phosphatase 2146 47.27 -1 2399669..2400163 - 164 30063720 - S2505 - hypothetical protein 2147 50.00 0 2400246..2400701 - 151 30063721 - S2506 - hypothetical protein 2148 52.37 0 2401039..2402241 + 400 30063722 ackA S2507 - acetate kinase 2149 55.48 0 2402316..2404460 + 714 30063723 pta S2508 - phosphate acetyltransferase 2150 51.61 0 2404650..2406170 + 506 161486459 yfcC S2509 - hypothetical protein 2151 53.59 0 2406203..2406745 - 180 30063725 - S2510 - putative regulator 2152 51.27 0 2406803..2407354 - 183 30063726 yfcE S2511 - phosphodiesterase 2153 51.94 0 2407410..2408054 - 214 30063727 yfcF S2512 - hypothetical protein 2154 50.93 0 2408190..2408837 + 215 30063728 yfcG S2513 - putative S-transferase 2155 44.90 -1 2408894..2409256 + 120 30063729 folX S2514 - D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2156 55.15 0 2409277..2410170 + 297 30063730 - S2515 - putative sugar nucleotide epimerase 2157 45.01 -1 2410218..2411108 - 296 30063731 yfcI S2516 - hypothetical protein 2158 51.68 0 2411305..2412078 - 257 30063732 hisP S2517 - histidine/lysine/arginine/ornithine transporter subunit 2159 50.07 0 2412086..2412802 - 238 30063733 hisM S2518 - histidine transport, membrane protein M 2160 53.42 0 2412799..2413485 - 228 30063734 hisQ S2519 - histidine transport system permease protein 2161 49.55 0 2413575..2414357 - 260 30063735 hisJ S2520 - histidine-binding periplasmic protein of high-affinity histidine transport system 2162 49.81 0 2414578..2415360 - 260 30063736 argT S2521 - lysine-, arginine-, ornithine-binding periplasmic protein 2163 53.16 0 2415626..2416195 - 189 30063737 ubiX S2522 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2164 52.83 0 2416290..2417807 - 505 30063738 purF S2523 - amidophosphoribosyltransferase 2165 49.08 0 2417844..2418332 - 162 30063739 cvpA S2524 - colicin V production protein 2166 57.01 +1 2418591..2419253 - 220 161486458 dedD S2525 - hypothetical protein 2167 55.95 +1 2419243..2420511 - 422 30063741 folC S2526 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2168 55.19 0 2420581..2421495 - 304 30063742 accD S2527 - acetyl-CoA carboxylase subunit beta 2169 48.18 0 2421651..2422310 - 219 30063743 dedA S2528 - hypothetical protein 2170 55.60 0 2422393..2423205 - 270 30063744 truA S2529 - tRNA pseudouridine synthase A 2171 55.42 0 2423205..2424218 - 337 30063745 usg S2530 - putative semialdehyde dehydrogenase 2172 53.65 0 2424284..2425420 - 378 30063746 pdxB S2531 - erythronate-4-phosphate dehydrogenase 2173 52.51 0 2425519..2426514 + 331 30063747 div S2532 - flagella biosynthesis regulator 2174 56.91 +1 2426511..2427689 - 392 30063748 - S2533 - hypothetical protein 2175 56.12 +1 2427944..2429185 - 413 30063749 fabB S2534 - 3-oxoacyl-(acyl carrier protein) synthase I 2176 52.17 0 2429344..2431350 + 668 161486457 mnmC S2535 - 5-methylaminomethyl-2-thiouridine methyltransferase 2177 53.41 0 2431471..2431749 - 92 30063751 - S2536 - hypothetical protein 2178 50.27 0 2431783..2432331 - 182 30063752 - S2537 - putative transporting ATPase 2179 52.59 0 2432331..2433140 - 269 30063753 yfcA S2538 - hypothetical protein 2180 55.15 0 2433140..2433964 - 274 30063754 mepA S2539 - penicillin-insensitive murein endopeptidase 2181 56.63 +1 2433968..2435053 - 361 30063755 aroC S2540 - chorismate synthase 2182 51.18 0 2435088..2436353 - 421 30063756 yfcB S2542 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2183 52.90 0 2436186..2436737 + 183 30063757 - S2541 - hypothetical protein 2184 45.92 -1 2442723..2443286 - 187 30063758 - S2550 - putative fimbrial-like protein 2185 52.78 0 2443555..2444058 - 167 30063759 - S2551 - IS1 orfB 2186 52.90 0 2443977..2444252 - 91 30063760 - S2552 - IS1 orfA 2187 52.88 0 2444747..2445232 - 161 30063761 - S2553 - phosphohistidine phosphatase 2188 52.03 0 2445435..2447579 - 714 30063762 fadJ S2554 - multifunctional fatty acid oxidation complex subunit alpha 2189 55.53 0 2447579..2448889 - 436 30063763 fadI S2555 - 3-ketoacyl-CoA thiolase 2190 51.46 0 2449069..2449377 - 102 30063764 - S2556 - hypothetical protein 2191 49.96 0 2449725..2451065 + 446 30063765 fadL S2557 - long-chain fatty acid outer membrane transporter 2192 34.84 -2 2451431..2452489 + 352 30063766 - S2558 - hypothetical protein 2193 52.38 0 2452671..2453426 - 251 30063767 vacJ S2559 - lipoprotein precursor 2194 48.78 0 2453831..2454652 + 273 30063768 yfdC S2560 - putative transport protein 2195 44.88 -1 2456297..2456599 - 100 30063769 - S2565 - IS911 orfA 2196 56.27 +1 2456580..2457185 - 201 30063770 - S2566 - IS4 orf 2197 51.12 0 2457501..2458934 + 477 30063771 - S2470 - hypothetical protein 2198 51.65 0 2458942..2460000 - 352 30063772 - S2568 - sucrose specific repressor 2199 50.56 0 2460404..2461732 + 442 30063773 dsdA S2570 - D-serine dehydratase 2200 41.78 -2 2461840..2463378 - 512 30063774 emrY S2571 - multidrug resistance protein Y 2201 41.49 -2 2463378..2464541 - 387 30063775 emrK S2572 - multidrug resistance protein K 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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