version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1970 47.99 0 2172571..2172843 - 90 30063544 yohL S2292 - hypothetical protein 1971 45.55 -1 2175483..2177963 - 826 30063545 yehB S2296 - putative outer membrane protein 1972 40.57 -2 2178734..2179258 - 174 30063546 yehD S2298 - putative fimbrial-like protein 1973 52.78 0 2179534..2180037 - 167 30063547 - S2299 - IS1 orfB 1974 52.54 0 2179956..2180231 - 91 30063548 - S2300 - IS1 orfA 1975 43.97 -1 2180328..2180609 - 93 30063549 yehE S2301 - hypothetical protein 1976 54.32 0 2180871..2181980 - 369 30063550 mrp S2302 - putative ATPase 1977 52.90 0 2182112..2184145 + 677 30063551 metG S2303 - methionyl-tRNA synthetase 1978 52.73 0 2194722..2195876 + 384 30063552 yehL S2313 - hypothetical protein 1979 55.13 0 2195887..2198166 + 759 30063553 yehM S2314 - hypothetical protein 1980 53.56 0 2198159..2199295 + 378 30063554 yehP S2315 - hypothetical protein 1981 54.39 0 2199292..2201295 + 667 30063555 yehQ S2316 - hypothetical protein 1982 52.78 0 2201408..2201911 - 167 30063556 - S2317 - IS1 orfB 1983 52.90 0 2201830..2202105 - 91 30063557 - S2318 - IS1 orfA 1984 42.64 -2 2202196..2202657 + 153 30063558 yehR S2319 - hypothetical protein 1985 52.78 0 2202878..2203381 - 167 30063559 - S2321 - IS1 orfB 1986 52.54 0 2203300..2203575 - 91 30063560 - S2322 - IS1 orfA 1987 49.03 0 2203991..2204710 - 239 30063561 yehT S2324 - putative two-component response-regulatory protein YehT 1988 50.77 0 2204707..2206392 - 561 30063562 yehU S2325 - putative 2-component sensor protein 1989 43.78 -1 2208343..2208591 + 82 30063563 - S2328 - DNA-damage-inducible protein 1990 49.63 0 2208707..2208976 - 89 30063564 - S2329 - hypothetical protein 1991 56.96 +1 2211660..2212205 - 181 30063565 - S2331 - hypothetical protein 1992 54.38 0 2212250..2213584 - 444 30063566 - S2332 - putative phage tail fiber protein 1993 49.69 0 2213709..2214197 - 162 30063567 - S2333 - putative phage tail fiber assembly protein 1994 45.95 -1 2214257..2214367 - 36 30063568 - S2334 - putative phage tail fiber protein 1995 52.90 0 2214712..2214987 + 91 30063569 - S2335 - IS1 orfA 1996 52.98 0 2214906..2215409 + 167 30063570 - S2336 - IS1 B 1997 54.74 0 2216108..2216434 + 108 30063571 - S2337 - IS629 orfA 1998 54.94 0 2216670..2217317 + 215 30063572 - S2338 - IS629 orfB 1999 56.19 +1 2217368..2217682 - 104 30063573 - S2340 - hypothetical protein 2000 49.07 0 2217875..2217982 + 35 30063574 - S2341 - hypothetical protein 2001 56.56 +1 2217963..2218694 - 243 30063575 yehW S2342 - putative transport system permease protein 2002 55.88 +1 2218699..2219625 - 308 30063576 yehX S2343 - putative ATP-binding component of a transport system 2003 57.08 +1 2219618..2220775 - 385 30063577 yehY S2344 - putative transport system permease protein 2004 54.68 0 2220782..2221699 - 305 30063578 yehZ S2345 - putative transport system permease protein 2005 53.92 0 2221951..2224248 - 765 30063579 bglX S2346 - beta-D-glucoside glucohydrolase 2006 52.27 0 2224444..2226159 + 571 30063580 dld S2347 - D-lactate dehydrogenase 2007 50.64 0 2226197..2227138 - 313 161486468 pbpG S2348 - D-alanyl-D-alanine endopeptidase 2008 53.57 0 2227303..2227890 - 195 30063582 yohC S2349 - hypothetical protein 2009 53.50 0 2228024..2228638 + 204 30063583 yohD S2350 - hypothetical protein 2010 54.32 0 2231683..2232630 - 315 30063584 yohI S2354 - tRNA-dihydrouridine synthase C 2011 49.62 0 2232869..2233267 + 132 30063585 yohJ S2355 - hypothetical protein 2012 53.74 0 2233264..2233959 + 231 30063586 yohK S2356 - hypothetical protein 2013 54.46 0 2234089..2234973 + 294 30063587 cdd S2357 - cytidine deaminase 2014 48.33 0 2235123..2235842 + 239 30063588 sanA S2358 - hypothetical protein 2015 42.92 -2 2235845..2236084 + 79 30063589 - S2359 - hypothetical protein 2016 51.33 0 2236278..2237516 + 412 30063590 - S2360 - putative oxidoreductase 2017 50.25 0 2238759..2239769 - 336 30063591 mglC S2362 - beta-methylgalactoside transporter inner membrane component 2018 45.43 -1 2239785..2241305 - 506 30063592 mglA S2363 - galactose/methyl galaxtoside transporter ATP-binding protein 2019 50.95 0 2241366..2242364 - 332 30063593 mglB S2364 - galactose-binding transport protein; receptor for galactose taxis 2020 52.45 0 2242644..2243684 - 346 30063594 galS S2365 - DNA-binding transcriptional regulator GalS 2021 54.60 0 2243826..2244902 - 358 30063595 yeiB S2366 - hypothetical protein 2022 50.97 0 2244919..2245587 - 222 30063596 folE S2367 - GTP cyclohydrolase I 2023 53.06 0 2248995..2250464 - 489 30063597 lysP S2370 - lysine transporter 2024 53.51 0 2250670..2251551 - 293 30063598 yeiE S2371 - putative DNA-binding transcriptional regulator 2025 52.95 0 2251650..2252699 + 349 30063599 yeiH S2372 - hypothetical protein 2026 51.52 0 2252773..2253630 + 285 30063600 nfo S2373 - endonuclease IV 2027 51.24 0 2253633..2254721 + 362 30063601 yeiI S2374 - hypothetical protein 2028 50.28 0 2254777..2256027 - 416 30063602 yeiJ S2375 - putative transport system permease protein 2029 51.59 0 2256127..2257068 - 313 30063603 rihB S2376 - ribonucleoside hydrolase 2 2030 43.52 -1 2257238..2257816 + 192 30063604 yeiL S2377 - DNA-binding transcriptional activator YeiL 2031 51.16 0 2257964..2259214 - 416 30063605 yeiM S2378 - putative transport system permease protein 2032 49.20 0 2259308..2260246 - 312 30063606 yeiN S2379 - hypothetical protein 2033 46.92 -1 2260234..2261175 - 313 30063607 yeiC S2380 - hypothetical protein 2034 55.97 +1 2261599..2263290 - 563 30063608 fruA S2381 - fructose-specific PTS system IIBC component 2035 53.25 0 2263307..2264245 - 312 30063609 fruK S2382 - 1-phosphofructokinase 2036 55.53 0 2264245..2265375 - 376 30063610 fruB S2383 - bifunctional fructose-specific PTS IIA/HPr protein 2037 53.01 0 2265743..2266921 + 392 30063611 yeiO S2384 - putative transport 2038 52.58 0 2266915..2267418 - 167 30063612 - S2385 - IS1 orfB 2039 52.54 0 2267337..2267612 - 91 30063613 - S2386 - IS1 orfA 2040 50.09 0 2268106..2268678 + 190 161486467 yeiP S2387 - elongation factor P 2041 51.26 0 2268901..2270367 + 488 30063615 yeiQ S2388 - putative oxidoreductase 2042 54.51 0 2270485..2271471 + 328 30063616 yeiR S2389 - hypothetical protein 2043 43.84 -1 2271510..2272223 + 237 30063617 - S2390 - hypothetical protein 2044 46.74 -1 2272635..2273201 + 188 30063618 spr S2391 - putative outer membrane lipoprotein 2045 50.10 0 2273382..2274938 + 518 30063619 rtn S2392 - hypothetical protein 2046 50.63 0 2275020..2276834 + 604 30063620 yejA S2393 - hypothetical protein 2047 50.96 0 2276835..2277929 + 364 30063621 yejB S2394 - putative transport system permease protein 2048 52.73 0 2277929..2278954 + 341 30063622 yejE S2395 - putative transport system permease protein 2049 51.76 0 2278956..2280545 + 529 30063623 yejF S2396 - putative ATP-binding component of a transport system 2050 48.41 0 2280549..2280893 - 114 30063624 yejG S2397 - hypothetical protein 2051 53.06 0 2281226..2282416 - 396 30063625 bcr S2398 - bicyclomycin/multidrug efflux system 2052 53.30 0 2282444..2283139 - 231 30063626 rsuA S2399 - 16S rRNA pseudouridylate synthase A 2053 53.15 0 2283289..2285049 + 586 30063627 yejH S2400 - putative ATP-dependent helicase 2054 49.82 0 2285174..2285458 + 94 30063628 rplY S2401 - 50S ribosomal protein L25 2055 52.18 0 2285597..2286604 - 335 30063629 yejK S2402 - nucleoid-associated protein NdpA 2056 49.56 0 2286786..2287013 + 75 30063630 yejL S2403 - hypothetical protein 2057 52.19 0 2287033..2288793 + 586 30063631 yejM S2404 - putative sulfatase 2058 48.67 0 2289047..2291557 - 836 30063632 yejO S2406 - putative ATP-binding component of a transport system 2059 52.31 0 2291958..2292605 + 215 30063633 narP S2407 - transcriptional regulator NarP 2060 54.51 0 2292816..2293868 - 350 30063634 ccmH S2408 - subunit of heme lyase 2061 54.30 0 2293865..2294422 - 185 30063635 dsbE S2409 - disulfide oxidoreductase 2062 57.00 +1 2294419..2296362 - 647 30063636 ccmF S2410 - cytochrome c-type biogenesis protein 2063 54.37 0 2296359..2296838 - 159 30063637 ccmE S2411 - cytochrome c-type biogenesis protein CcmE 2064 56.67 +1 2296835..2297044 - 69 30063638 ccmD S2412 - heme exporter protein C 2065 55.56 0 2297041..2297778 - 245 30063639 ccmC S2413 - heme exporter protein C 2066 55.66 +1 2297820..2298482 - 220 30063640 ccmB S2414 - heme exporter protein B, cytochrome c-type biogenesis protein 2067 55.61 0 2298479..2299102 - 207 30063641 ccmA S2415 - cytochrome c biogenesis protein CcmA 2068 51.74 0 2299115..2299717 - 200 30063642 napC S2416 - cytochrome c-type protein NapC 2069 55.78 +1 2299727..2300176 - 149 30063643 napB S2417 - diheme cytochrome c550 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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