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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3418 63.20 0 3682853..3683863 + 336 86359087 gap RHE_CH03496 - glyceraldehyde 3-phosphate dehydrogenase protein 3419 58.41 -1 3684003..3684317 + 104 86359088 - RHE_CH03497 - hypothetical protein 3420 62.83 0 3685042..3686916 + 624 86359089 - RHE_CH03498 - potassium/proton antiporter 3421 63.64 0 3686933..3688189 + 418 86359090 pgk RHE_CH03499 - phosphoglycerate kinase 3422 62.07 0 3688477..3689499 + 340 86359091 fbaB RHE_CH03500 - fructose-bisphosphate aldolase protein 3423 63.53 0 3689852..3690775 + 307 86359092 phzF RHE_CH03501 - phenazine biosynthesis protein 3424 60.00 0 3690805..3690969 - 54 86359093 - RHE_CH03502 - hypothetical protein 3425 63.93 0 3691142..3692422 + 426 86359094 - RHE_CH03503 - transporter permease protein 3426 58.85 0 3692578..3692769 + 63 86359095 - RHE_CH03504 - hypothetical protein 3427 62.40 0 3693161..3693676 + 171 86359096 - RHE_CH03505 - hypothetical protein 3428 59.01 0 3693815..3694036 - 73 86359097 rpmE RHE_CH03506 - 50S ribosomal protein L31 3429 66.78 +1 3694304..3696031 + 575 86359098 - RHE_CH03507 - multidrug ABC transporter ATP-binding protein 3430 64.25 0 3696175..3697167 + 330 86359099 - RHE_CH03508 - hypothetical protein 3431 53.44 -2 3697329..3697517 + 62 86359100 - RHE_CH03509 - hypothetical protein 3432 63.13 0 3697787..3698125 + 112 86359101 - RHE_CH03510 - hypothetical protein 3433 66.99 +1 3698133..3699383 + 416 86359102 - RHE_CH03511 - RNA polymerase ECF-subfamily sigma factor 3434 64.24 0 3699384..3700415 - 343 86359103 - RHE_CH03512 - hypothetical protein 3435 63.41 0 3700419..3701522 - 367 86359104 - RHE_CH03513 - hypothetical protein 3436 63.30 0 3701635..3702435 - 266 86359105 suhBch RHE_CH03514 - myo-inositol-1(or 4)-monophosphatase protein 3437 64.85 +1 3702634..3703731 - 365 86359106 cheBch2 RHE_CH03515 - chemotaxis-specific methylesterase protein 3438 58.62 0 3703740..3704597 - 285 86359107 cheRch2 RHE_CH03516 - chemotaxis methyltransferase protein 3439 62.26 0 3704625..3705101 - 158 86359108 cheW3 RHE_CH03517 - chemotaxis signal transduction protein 3440 62.03 0 3705104..3707131 - 675 86359109 - RHE_CH03518 - putative methyl-accepting chemotaxis protein 3441 62.51 0 3707152..3708954 - 600 86359110 - RHE_CH03519 - putative methyl-accepting chemotaxis protein 3442 62.56 0 3709338..3711041 - 567 86359111 - RHE_CH03520 - putative methyl-accepting chemotaxis protein 3443 60.39 0 3711073..3711582 - 169 86359112 cheW4 RHE_CH03521 - chemotaxis signal transduction protein 3444 63.55 0 3711579..3713630 - 683 86359113 - RHE_CH03522 - putative chemotaxis two-component sensor histidine kinase protein 3445 58.54 0 3713627..3713995 - 122 86359114 cheY3 RHE_CH03523 - chemotaxis two-component response regulator protein 3446 43.94 -2 3713992..3714321 - 109 86359115 - RHE_CH03524 - hypothetical protein 3447 61.51 0 3714791..3716401 + 536 86359116 - RHE_CH03525 - putative chemotaxis sensory transducer protein 3448 62.87 0 3716524..3717657 - 377 86359117 - RHE_CH03526 - hypothetical protein 3449 61.96 0 3717617..3718360 - 247 86359118 thiEch RHE_CH03527 - thiamine-phosphate pyrophosphorylase 3450 63.53 0 3718379..3719143 + 254 86359119 - RHE_CH03528 - putative transporter, permease protein 3451 59.39 0 3719211..3719471 + 86 86359120 - RHE_CH03529 - transcriptional regulator protein 3452 56.37 -1 3720064..3720267 + 67 86359121 - RHE_CH03530 - hypothetical protein 3453 63.93 0 3720341..3720778 + 145 86359122 purE RHE_CH03531 - phosphoribosylaminoimidazole carboxylase catalytic subunit protein 3454 64.53 0 3720724..3721845 + 373 86359123 purK RHE_CH03532 - phosphoribosylaminoimidazole carboxylase ATPase subunit 3455 56.35 -1 3722018..3722143 + 41 86359124 rpmJ RHE_CH03533 - 50S ribosomal protein L36 3456 57.89 -1 3722253..3722867 + 204 86359125 - RHE_CH03534 - hypothetical protein 3457 63.75 0 3723078..3724004 + 308 86359126 - RHE_CH03535 - lactone-specific esterase protein 3458 62.75 0 3724129..3725865 + 578 86359127 ggt2 RHE_CH03536 - gamma-glutamyltranspeptidase protein 3459 66.97 +1 3725988..3726962 + 324 86359128 - RHE_CH03537 - threonine dehydratase protein 3460 65.20 +1 3727018..3727971 - 317 86359129 - RHE_CH03538 - LysR family transcriptional regulator 3461 61.19 0 3728032..3728451 + 139 86359130 - RHE_CH03539 - hypothetical protein 3462 61.98 0 3728448..3729002 + 184 86359131 - RHE_CH03540 - hypothetical protein 3463 60.66 0 3729005..3729637 - 210 86359132 - RHE_CH03541 - amino acid efflux LysE family protein 3464 64.73 0 3729765..3731207 - 480 86359133 pykA RHE_CH03542 - pyruvate kinase 3465 60.08 0 3731204..3731689 - 161 86359134 - RHE_CH03543 - hypothetical protein 3466 62.23 0 3731888..3732676 + 262 86359135 - RHE_CH03544 - putative N-formylglutamate amidohydrolase protein 3467 59.80 0 3732703..3733008 + 101 86359136 - RHE_CH03545 - hypothetical protein 3468 56.82 -1 3733100..3733363 + 87 86359137 - RHE_CH03546 - hypothetical protein 3469 64.06 0 3733518..3735359 - 613 86359138 - RHE_CH03547 - hypothetical protein 3470 61.74 0 3735539..3737080 - 513 86359139 tacA RHE_CH03548 - sigma-54-dependent transcriptional regulator (activator) protein 3471 59.43 0 3737045..3739144 + 699 86359140 pepF RHE_CH03549 - oligoendopeptidase F protein 3472 60.71 0 3739361..3740518 + 385 86359141 pabB RHE_CH03550 - para-aminobenzoate synthase component I 3473 64.31 0 3740467..3741144 + 225 86359142 - RHE_CH03551 - hypothetical protein 3474 62.11 0 3741147..3741431 + 94 86359143 - RHE_CH03552 - hypothetical protein 3475 61.29 0 3741598..3743049 + 483 86359144 hss RHE_CH03553 - homospermidine synthase protein 3476 59.08 0 3743220..3743588 + 122 86359145 omp3 RHE_CH03554 - outer membrane lipoprotein 3477 62.43 0 3743874..3745880 + 668 86359146 - RHE_CH03555 - 5`-nucleotidase protein 3478 59.13 0 3746004..3747038 + 344 86359147 hemH RHE_CH03556 - ferrochelatase 3479 62.98 0 3747182..3748213 + 343 86359148 - RHE_CH03557 - putative membrane protease subunit protein 3480 64.04 0 3748217..3748672 + 151 86359149 - RHE_CH03558 - hypothetical protein 3481 62.05 0 3748673..3749668 - 331 86359150 kpsF RHE_CH03559 - polysialic acid capsule expression protein 3482 64.32 0 3749809..3751344 + 511 86359151 - RHE_CH03560 - hypothetical protein 3483 59.35 0 3751401..3752288 - 295 86359152 exoN RHE_CH03561 - UTP-glucose-1-phosphate uridylyltransferase protein 3484 60.62 0 3752492..3753715 + 407 86359153 - RHE_CH03562 - membrane-bound lytic murein transglycosylase protein 3485 62.77 0 3753807..3755039 + 410 86359154 - RHE_CH03563 - hypothetical protein 3486 59.17 0 3755065..3755691 - 208 86359155 - RHE_CH03564 - hypothetical protein 3487 64.33 0 3755904..3757358 - 484 86359156 gltD RHE_CH03565 - glutamate synthase subunit beta 3488 62.83 0 3757583..3762304 - 1573 86359157 gltB RHE_CH03566 - glutamate synthase large subunit protein 3489 55.41 -1 3762276..3762719 - 147 86359158 - RHE_CH03567 - hypothetical protein 3490 63.53 0 3762846..3763898 + 350 86359159 - RHE_CH03568 - threonine aldolase protein 3491 63.51 0 3763946..3764833 - 295 86359160 - RHE_CH03569 - LysR family transcriptional regulator 3492 61.99 0 3764888..3765892 + 334 86359161 - RHE_CH03570 - putative Na+/bile acid cotransporter protein 3493 60.08 0 3765969..3766439 - 156 86359162 ibpA RHE_CH03571 - molecular chaperone small heat shock protein 3494 63.79 0 3766840..3767814 + 324 86359163 pldB RHE_CH03572 - lysophospholipase L2 protein 3495 62.35 0 3767885..3768694 - 269 86359164 - RHE_CH03573 - monophosphatase protein 3496 62.59 0 3768939..3769820 - 293 86359165 - RHE_CH03574 - N-formylglutamate amidohydrolase protein 3497 57.02 -1 3770009..3770371 + 120 86359166 - RHE_CH03575 - two-component response regulator protein 3498 59.62 0 3770908..3771219 + 103 86359167 - RHE_CH03577 - hypothetical protein 3499 60.44 0 3771629..3772672 + 347 86359168 ropAch3 RHE_CH03578 - porin outer membrane protein 3500 62.83 0 3773050..3773544 + 164 86359169 - RHE_CH03579 - hypothetical protein 3501 69.49 +2 3773551..3774258 - 235 86359170 - RHE_CH03580 - hypothetical protein 3502 60.34 0 3774925..3776316 + 463 86359171 - RHE_CH03581 - hypothetical protein 3503 65.68 +1 3776759..3778276 - 505 86359172 - RHE_CH03582 - hypothetical protein 3504 60.57 0 3778363..3778854 - 163 86359173 - RHE_CH03583 - hypothetical protein 3505 63.18 0 3778851..3779825 - 324 86359174 - RHE_CH03584 - hypothetical protein 3506 62.22 0 3780088..3781212 - 374 86359175 - RHE_CH03585 - iron ABC transporter, substrate-binding protein 3507 61.80 0 3781434..3783302 + 622 86359176 cyaFch2 RHE_CH03586 - adenylate cyclase protein 3508 62.09 0 3783396..3784073 + 225 86359177 - RHE_CH03587 - two-component response regulator protein 3509 66.38 +1 3784070..3785452 + 460 86359178 - RHE_CH03588 - two-component sensor histidine kinase protein 3510 63.69 0 3785563..3788886 + 1107 86359179 - RHE_CH03589 - putative transglutaminase-like protein 3511 65.55 +1 3788926..3791343 + 805 86359180 - RHE_CH03590 - hypothetical protein 3512 63.04 0 3791373..3792227 + 284 86359181 - RHE_CH03591 - putative transglutaminase-like protein 3513 56.55 -1 3792342..3793577 + 411 86359182 - RHE_CH03592 - hypothetical protein 3514 61.79 0 3793850..3796312 + 820 86359183 glgP RHE_CH03593 - glycogen phosphorylase protein 3515 61.55 0 3796309..3798516 + 735 86359184 glgBch RHE_CH03594 - glycogen branching enzyme 3516 60.02 0 3798535..3799797 + 420 86359185 glgC RHE_CH03595 - glucose-1-phosphate adenylyltransferase 3517 61.96 0 3799864..3801243 + 459 86359186 glgA RHE_CH03596 - glycogen synthase 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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