version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1041 66.67 0 1083306..1085522 + 738 87199067 - Saro_1045 - branched-chain alpha-keto acid dehydrogenase E1 component 1042 68.34 0 1085515..1086528 + 337 87199068 - Saro_1046 - acyl-carrier domain-containing protein 1043 70.32 +1 1086525..1086989 + 154 87199069 - Saro_1047 - protein tyrosine phosphatase 1044 67.96 0 1087170..1087943 - 257 87199070 - Saro_1048 - DeoR family transcriptional regulator 1045 66.57 0 1088007..1089080 - 357 87199071 - Saro_1049 - rhamnose-proton symporter 1046 66.06 0 1089104..1090249 - 381 87199072 lldD Saro_1050 - L-lactate dehydrogenase 1047 67.72 0 1090260..1091687 - 475 87199073 - Saro_1051 - carbohydrate kinase, FGGY 1048 68.81 +1 1091834..1092811 - 325 87199074 - Saro_1052 - regulatory protein, LuxR 1049 63.05 0 1093126..1095501 + 791 87199075 - Saro_1053 - TonB-dependent receptor 1050 64.76 0 1095516..1097246 + 576 87199076 - Saro_1054 - amidohydrolase-like 1051 70.11 +1 1097674..1097847 - 57 87199077 - Saro_1055 - hypothetical protein 1052 70.97 +1 1097844..1098842 - 332 87199078 - Saro_1056 - ribonuclease 1053 70.30 +1 1098832..1099437 - 201 87199079 - Saro_1057 - maf protein 1054 62.96 0 1099437..1099733 - 98 87199080 - Saro_1058 - translation initiation factor 1 1055 67.71 0 1100033..1102534 + 833 87199081 - Saro_1059 - TonB-dependent receptor 1056 66.16 0 1102691..1104667 + 658 87199082 uvrC Saro_1060 - excinuclease ABC subunit C 1057 65.63 0 1104677..1105735 + 352 87199083 - Saro_1061 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1058 68.69 +1 1105871..1106659 + 262 87199084 - Saro_1062 - hypothetical protein 1059 68.87 +1 1106656..1107108 + 150 87199085 - Saro_1063 - hypothetical protein 1060 67.11 0 1107109..1108011 - 300 87199086 - Saro_1064 - palmitoyl-CoA hydrolase 1061 64.40 0 1108056..1108937 - 293 87199087 - Saro_1065 - transcription factor jumonji, jmjC 1062 65.03 0 1108934..1110097 - 387 87199088 - Saro_1066 - hypothetical protein 1063 64.02 0 1110255..1112408 - 717 87199089 hppA Saro_1067 - membrane-bound proton-translocating pyrophosphatase 1064 68.52 +1 1112500..1113414 - 304 87199090 - Saro_1068 - thiamine-monophosphate kinase 1065 64.96 0 1113487..1114659 + 390 87199091 - Saro_1069 - acetyl-CoA acetyltransferase 1066 66.41 0 1114693..1115478 + 261 87199092 - Saro_1070 - short-chain dehydrogenase/reductase SDR 1067 64.72 0 1115540..1116412 + 290 87199093 - Saro_1071 - enoyl-CoA hydratase 1068 61.03 -1 1116409..1117047 + 212 87199094 - Saro_1072 - TetR family transcriptional regulator 1069 63.40 0 1117252..1117710 + 152 87199095 - Saro_1073 - MarR family transcriptional regulator 1070 66.07 0 1117707..1118714 + 335 87199096 - Saro_1074 - fumarylacetoacetate (FAA) hydrolase 1071 64.38 0 1118771..1119778 - 335 87199097 - Saro_1075 - type II secretion system protein 1072 63.49 0 1119798..1120772 - 324 87199098 - Saro_1076 - type II secretion system protein 1073 65.65 0 1120816..1122090 - 424 87199099 - Saro_1077 - response regulator receiver domain-containing protein 1074 67.41 0 1122095..1122766 - 223 87199100 - Saro_1078 - hypothetical protein 1075 65.99 0 1122781..1124400 - 539 87199101 - Saro_1079 - type II and III secretion system protein 1076 66.96 0 1124402..1125430 - 342 87199102 - Saro_1080 - Flp pilus assembly CpaB 1077 64.67 0 1125506..1126006 - 166 87199103 - Saro_1081 - peptidase A24A, prepilin type IV 1078 66.77 0 1126076..1127068 + 330 87199104 - Saro_1082 - lysophospholipase L2 1079 69.55 +1 1127065..1128174 + 369 87199105 - Saro_1083 - FAD dependent oxidoreductase 1080 56.83 -2 1128266..1128448 + 60 87199106 - Saro_1084 - hypothetical protein 1081 66.20 0 1128544..1128975 - 143 87199107 - Saro_1085 - RNase HI 1082 68.39 0 1128972..1129958 - 328 87199108 - Saro_1086 - homoserine kinase 1083 68.42 0 1129961..1130929 - 322 87199109 - Saro_1087 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1084 69.68 +1 1131056..1131718 + 220 87199110 - Saro_1088 - hypothetical protein 1085 64.78 0 1131811..1133559 + 582 87199111 - Saro_1089 - arginyl-tRNA synthetase 1086 68.13 0 1133585..1134334 + 249 87199112 - Saro_1090 - hypothetical protein 1087 67.70 0 1134430..1135497 + 355 87199113 - Saro_1091 - Beta-N-acetylhexosaminidase 1088 66.42 0 1135497..1136294 + 265 87199114 - Saro_1092 - condensin subunit ScpA 1089 66.51 0 1136291..1136938 + 215 87199115 - Saro_1093 - condensin subunit ScpB 1090 65.08 0 1137023..1137274 + 83 87199116 - Saro_1094 - twin arginine-targeting protein translocase 1091 68.53 +1 1137301..1137729 + 142 87199117 - Saro_1095 - twin-arginine translocation protein TatB 1092 62.14 0 1137726..1138565 + 279 87199118 - Saro_1096 - Sec-independent protein translocase TatC 1093 69.01 +1 1138736..1140442 - 568 87199119 - Saro_1097 - amidohydrolase 1094 69.01 +1 1140439..1141377 - 312 87199120 - Saro_1098 - 3-hydroxyisobutyrate dehydrogenase 1095 65.69 0 1141436..1141846 + 136 87199121 - Saro_1099 - hypothetical protein 1096 67.93 0 1141884..1143149 + 421 87199122 - Saro_1100 - threonine dehydratase 1097 63.63 0 1143360..1144214 + 284 87199123 - Saro_1101 - arginyl-tRNA-protein transferase 1098 67.70 0 1144285..1146414 + 709 87199124 - Saro_1102 - surface antigen (D15) 1099 67.64 0 1146414..1150610 + 1398 87199125 - Saro_1103 - hypothetical protein 1100 66.39 0 1150672..1152096 - 474 87199126 - Saro_1104 - aldehyde dehydrogenase 1101 60.48 -1 1152213..1152503 - 96 87199127 - Saro_1105 - hypothetical protein 1102 65.10 0 1152536..1154830 + 764 87199128 - Saro_1106 - periplasmic sensor diguanylate cyclase/phosphodiesterase 1103 66.87 0 1154865..1155350 - 161 87199129 - Saro_1107 - CHAP 1104 63.19 0 1155575..1156984 - 469 87199130 - Saro_1108 - L-glutamine synthetase 1105 62.83 0 1157136..1157474 - 112 87199131 - Saro_1109 - nitrogen regulatory protein P-II 1106 65.85 0 1157759..1158610 - 283 87199132 - Saro_1110 - methionine aminopeptidase, type I 1107 65.43 0 1158645..1159451 - 268 87199133 - Saro_1111 - hypothetical protein 1108 67.68 0 1159505..1160887 + 460 87199134 - Saro_1112 - leucyl aminopeptidase 1109 65.96 0 1160890..1161315 + 141 87199135 - Saro_1113 - hypothetical protein 1110 68.28 0 1161312..1162241 + 309 87199136 - Saro_1114 - N-acetyl-gamma-glutamyl-phosphate reductase 1111 61.95 -1 1162325..1162642 - 105 87199137 - Saro_1115 - ferredoxin 1112 66.34 0 1162772..1163389 + 205 87199138 - Saro_1116 - HhH-GPD 1113 67.54 0 1163430..1164230 + 266 87199139 - Saro_1117 - short chain dehydrogenase 1114 63.92 0 1164233..1164523 - 96 87199140 - Saro_1118 - pterin-4-alpha-carbinolamine dehydratase 1115 68.06 0 1164585..1165160 + 191 87199141 - Saro_1119 - heme exporter protein CcmA 1116 71.19 +1 1165157..1165819 + 220 87199142 - Saro_1120 - cytochrome c-type biogenesis protein CcmB 1117 64.66 0 1165884..1166882 + 332 87199143 - Saro_1121 - cysteine synthase A 1118 69.27 +1 1166897..1167280 + 127 87199144 - Saro_1122 - hypothetical protein 1119 68.83 +1 1167283..1168020 + 245 87199145 - Saro_1123 - hypothetical protein 1120 65.61 0 1168272..1168838 + 188 87199146 - Saro_1124 - hypothetical protein 1121 66.67 0 1168835..1169824 + 329 87199147 - Saro_1125 - methyltransferase 1122 65.27 0 1169821..1170681 + 286 87199148 - Saro_1126 - hypothetical protein 1123 65.29 0 1170678..1172423 + 581 87199149 - Saro_1127 - peptidoglycan glycosyltransferase 1124 67.91 0 1172420..1173868 + 482 87199150 murE Saro_1128 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1125 67.82 0 1173865..1175334 + 489 87199151 - Saro_1129 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 1126 65.54 0 1175335..1176399 + 354 87199152 - Saro_1130 - phospho-N-acetylmuramoyl-pentapeptide-transferase 1127 67.27 0 1176396..1177727 + 443 87199153 - Saro_1131 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 1128 63.90 0 1177766..1178959 + 397 87199154 - Saro_1132 - cell cycle protein 1129 68.12 0 1178956..1180122 + 388 87199155 murG Saro_1133 - N-acetylglucosaminyl transferase 1130 65.33 0 1180119..1181543 + 474 87199156 murC Saro_1134 - UDP-N-acetylmuramate--L-alanine ligase 1131 65.66 0 1181540..1182433 + 297 87199157 - Saro_1135 - UDP-N-acetylmuramate dehydrogenase 1132 64.97 0 1182477..1183418 + 313 87199158 - Saro_1136 - D-alanine--D-alanine ligase 1133 67.50 0 1183423..1184385 + 320 87199159 - Saro_1137 - cell division protein FtsQ 1134 65.96 0 1184393..1185673 + 426 87199160 - Saro_1138 - cell division protein FtsA 1135 67.07 0 1185868..1187343 + 491 87199161 - Saro_1139 - cell division protein FtsZ 1136 69.45 +1 1187406..1189598 + 730 87199162 - Saro_1140 - hypothetical protein 1137 65.67 0 1189801..1190304 + 167 87199163 - Saro_1141 - hypothetical protein 1138 69.75 +1 1190387..1191196 + 269 87199164 - Saro_1142 - pyrroline-5-carboxylate reductase 1139 63.31 0 1191311..1192054 + 247 87199165 - Saro_1143 - hypothetical protein 1140 66.12 0 1192227..1192958 + 243 87199166 - Saro_1144 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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