version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2115 64.10 0 2241239..2242096 + 285 114799371 ksgA HNE_2152 - dimethyladenosine transferase 2116 61.01 0 2242093..2242746 - 217 114798626 - HNE_2153 - putative guanylate kinase 2117 62.71 0 2242736..2243620 - 294 114798477 - HNE_2154 - hypothetical protein 2118 57.90 -1 2243620..2244657 - 345 114800253 - HNE_2155 - hypothetical protein 2119 60.06 0 2244883..2246169 - 428 114798980 fabF HNE_2156 - 3-oxoacyl-[acyl-carrier-protein] synthase II 2120 52.99 -2 2246184..2246417 - 77 114798204 acpP3 HNE_2157 - acyl carrier protein 2121 58.67 0 2246530..2247267 - 245 114797161 fabG HNE_2158 - 3-oxoacyl-(acyl-carrier-protein) reductase 2122 52.20 -2 2247271..2247429 - 52 114799680 - HNE_2159 - hypothetical protein 2123 63.72 0 2247432..2248382 - 316 114799413 fabD HNE_2160 - malonyl CoA-acyl carrier protein transacylase 2124 57.23 -1 2248596..2248934 + 112 114800162 rpsF HNE_2161 - ribosomal protein S6 2125 54.26 -2 2248955..2249212 + 85 114797845 rpsR HNE_2162 - ribosomal protein S18 2126 61.37 0 2249225..2249809 + 194 114798663 rplI HNE_2163 - ribosomal protein L9 2127 61.03 0 2249981..2251471 + 496 114797768 dnaB HNE_2164 - replicative DNA helicase 2128 64.81 0 2251474..2251959 - 161 114798747 - HNE_2165 - CinA domain-containing protein 2129 60.73 0 2251987..2252895 - 302 114799733 - HNE_2166 - enoyl-CoA hydratase/isomerase family protein 2130 62.22 0 2253044..2254348 + 434 114797205 - HNE_2167 - amidohydrolase family protein 2131 60.51 0 2254361..2255350 + 329 114798176 - HNE_2168 - hypothetical protein 2132 66.47 +1 2255386..2256873 - 495 114799121 cobQ HNE_2169 - cobyric acid synthase CobQ 2133 61.90 0 2256971..2257369 - 132 114797365 - HNE_2170 - hypothetical protein 2134 52.90 -2 2257505..2257642 - 45 114798321 - HNE_2171 - hypothetical protein 2135 58.47 0 2257608..2257790 - 60 114800469 - HNE_2172 - hypothetical protein 2136 59.19 0 2257787..2258923 - 378 114799735 - HNE_2173 - PepSY-associated TM helix domain-containing protein 2137 61.67 0 2258935..2261115 - 726 114798388 - HNE_2174 - TonB-dependent receptor family protein 2138 58.20 -1 2262534..2264033 - 499 114797369 mmsA2 HNE_2176 - methylmalonate-semialdehyde dehydrogenase 2139 53.45 -2 2264088..2265698 - 536 114799711 - HNE_2177 - putative symporter YidK 2140 56.98 -1 2265873..2267390 + 505 114798724 - HNE_2178 - sulfatase family protein 2141 59.41 0 2267474..2268934 - 486 114800451 - HNE_2179 - putative lipoprotein 2142 56.13 -1 2269081..2271357 - 758 114799262 - HNE_2180 - outer membrane receptor (OMR) family protein 2143 56.68 -1 2271561..2272391 + 276 114798245 - HNE_2181 - SIS domain-containing protein 2144 58.41 -1 2272534..2274447 + 637 114797675 iolC HNE_2182 - kinase IolC 2145 58.86 0 2274466..2276310 + 614 114798854 iolD HNE_2183 - thiamine pyrophosphate-dependent enzyme IolD 2146 58.20 -1 2276323..2277231 + 302 114798293 iolE HNE_2184 - 2-keto-myo-inositol dehydratase 2147 59.80 0 2277224..2278024 + 266 114797478 iolB HNE_2185 - myo-inositol catabolism protein IolB 2148 57.69 -1 2278092..2279216 + 374 114799793 - HNE_2186 - oxidoreductase, NAD-binding 2149 63.65 0 2280613..2282400 + 595 114797632 - HNE_2187 - putative outer membrane efflux protein 2150 58.33 -1 2282460..2283143 + 227 114800395 - HNE_2188 - DNA-binding heavy metal response regulator 2151 62.02 0 2283140..2284495 + 451 114798801 - HNE_2189 - heavy metal sensor histidine kinase 2152 62.01 0 2284598..2287774 - 1058 114797722 - HNE_2190 - AcrB/AcrD/AcrF family protein 2153 66.30 +1 2287828..2288928 - 366 114797259 - HNE_2191 - RND family efflux transporter MFP subunit 2154 63.61 0 2289126..2290040 - 304 114799757 - HNE_2192 - short chain dehydrogenase/reductase family oxidoreductase 2155 58.28 -1 2290265..2290729 + 154 114800040 - HNE_2193 - MarR family transcriptional regulator 2156 62.38 0 2290726..2291541 + 271 114798483 - HNE_2194 - hypothetical protein 2157 60.63 0 2291562..2292008 - 148 114797925 - HNE_2195 - DoxX family protein 2158 63.56 0 2292141..2293235 - 364 114799498 - HNE_2196 - short chain dehydrogenase/reductase family oxidoreductase 2159 67.39 +1 2293336..2294025 - 229 114798698 - HNE_2197 - hypothetical protein 2160 59.92 0 2294035..2294508 - 157 114799027 - HNE_2198 - hypothetical protein 2161 61.58 0 2294646..2295569 - 307 114799755 - HNE_2199 - AraC family transcriptional regulator 2162 59.69 0 2296179..2296637 + 152 114800410 - HNE_2200 - putative isoquinoline 1-oxidoreductase, alpha subunit 2163 64.59 0 2296615..2297337 + 240 114797647 - HNE_2201 - hypothetical protein 2164 62.21 0 2297397..2299526 + 709 114797470 - HNE_2202 - putative isoquinoline 1-oxidoreductase, beta subunit 2165 58.55 0 2299572..2300150 - 192 114798163 - HNE_2203 - sulfatase domain-containing protein 2166 60.23 0 2300264..2301304 - 346 114798933 - HNE_2204 - aldo/keto reductase family oxidoreductase 2167 64.85 0 2301362..2302186 - 274 114799710 - HNE_2205 - short chain dehydrogenase/reductase family oxidoreductase 2168 63.41 0 2302532..2303299 + 255 114797204 - HNE_2206 - GntR family transcriptional regulator 2169 58.49 0 2303327..2304622 - 431 114798191 - HNE_2207 - cytochrome P450 family protein 2170 62.08 0 2304653..2306332 - 559 114799635 - HNE_2208 - hypothetical protein 2171 63.66 0 2306592..2307290 - 232 114800415 - HNE_2209 - TetR family transcriptional regulator 2172 59.35 0 2307522..2309858 + 778 114797247 - HNE_2210 - outer membrane receptor (OMR) family protein 2173 61.23 0 2309894..2311567 + 557 114798044 - HNE_2211 - sulfatase family protein 2174 61.54 0 2311633..2312724 + 363 114800456 - HNE_2212 - hypothetical protein 2175 65.71 0 2312775..2314349 - 524 114797649 - HNE_2213 - hypothetical protein 2176 58.28 -1 2314436..2314864 - 142 114798316 - HNE_2214 - hypothetical protein 2177 61.79 0 2314889..2316220 - 443 114798445 - HNE_2215 - major facilitator family transporter 2178 62.62 0 2316492..2317430 + 312 114798660 - HNE_2216 - LysR family transcriptional regulator 2179 59.22 0 2317501..2318346 - 281 114798853 - HNE_2217 - fumarylacetoacetate hydrolase family protein 2180 55.56 -1 2318411..2319058 - 215 114799506 - HNE_2218 - putative biphenyl-2,3-diol 1,2-dioxygenase 2181 61.61 0 2319423..2320886 + 487 114799609 - HNE_2219 - aldehyde dehydrogenase family protein 2182 60.42 0 2321028..2321780 + 250 114800399 - HNE_2220 - class II aldolase/adducin domain-containing protein 2183 63.13 0 2321796..2322728 - 310 114800019 - HNE_2221 - short chain dehydrogenase/reductase family oxidoreductase 2184 58.84 0 2322946..2323839 - 297 114798404 - HNE_2222 - AraC family transcriptional regulator 2185 64.77 0 2324003..2325319 + 438 114799244 - HNE_2223 - major facilitator family transporter 2186 60.86 0 2325531..2326322 + 263 114800020 - HNE_2224 - MipA family protein 2187 60.39 0 2326743..2327714 - 323 114797195 - HNE_2225 - aldo/keto reductase family oxidoreductase 2188 64.17 0 2327850..2328731 + 293 114798010 - HNE_2226 - AraC family transcriptional regulator 2189 62.20 0 2328883..2329374 - 163 114797318 - HNE_2227 - hypothetical protein 2190 63.20 0 2329387..2330280 - 297 114798645 - HNE_2228 - NAD-dependent epimerase/dehydratase family protein 2191 65.56 0 2330384..2331193 + 269 114799172 - HNE_2229 - putative transcriptional regulator 2192 66.67 +1 2331874..2332653 - 259 114799955 cobA HNE_2230 - uroporphyrin-III C-methyltransferase 2193 62.87 0 2332650..2333861 - 403 114800210 - HNE_2231 - putative lipoprotein 2194 67.02 +1 2334064..2335206 - 380 114797910 - HNE_2232 - putative nitrate transporter 2195 64.12 0 2335203..2335949 - 248 114799661 nasT HNE_2233 - response regulator NasT 2196 62.99 0 2336181..2338652 + 823 114800413 nirB HNE_2234 - nitrite reductase [NAD(P)H], large subunit 2197 67.82 +1 2338649..2338996 + 115 114797238 nirD HNE_2235 - nitrite reductase [NAD(P)H], small subunit 2198 61.45 0 2339011..2339853 + 280 114797947 fnt HNE_2236 - formate/nitrite transporter 2199 67.94 +1 2339859..2341583 + 574 114798196 - HNE_2237 - carbohydrate kinase 2200 56.19 -1 2342080..2342184 - 34 114798183 - HNE_2239 - hypothetical protein 2201 65.09 0 2342174..2342869 - 231 114797199 - HNE_2240 - hypothetical protein 2202 66.60 +1 2342950..2344371 - 473 114800524 - HNE_2241 - putative chain length determinant protein 2203 62.87 0 2344554..2345501 + 315 114799572 - HNE_2242 - 2OG-Fe(II) oxygenase family oxidoreductase 2204 63.59 0 2345591..2346727 + 378 114797797 - HNE_2243 - aminotransferase 2205 62.84 0 2346810..2348351 - 513 114800349 pepA HNE_2244 - cytosol aminopeptidase 2206 62.09 0 2348467..2349099 - 210 114799358 - HNE_2245 - HAD family hydrolase 2207 64.04 0 2349106..2349903 - 265 114799032 thiG HNE_2246 - thiazole synthase 2208 63.85 0 2350028..2350240 - 70 114798481 thiS HNE_2247 - thiamine biosynthesis protein ThiS 2209 59.23 0 2350304..2350747 + 147 114797900 aroQ HNE_2248 - 3-dehydroquinate dehydratase 2210 62.21 0 2350750..2351220 + 156 114797700 accB HNE_2249 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 2211 62.08 0 2351222..2352595 + 457 114798573 accC HNE_2250 - acetyl-CoA carboxylase, biotin carboxylase 2212 62.03 0 2352653..2353429 + 258 114797414 aat HNE_2251 - leucyl/phenylalanyl-tRNA--protein transferase 2213 60.72 0 2353273..2353827 - 184 114799292 - HNE_2252 - hypothetical protein 2214 60.93 0 2353824..2354381 - 185 114797425 - HNE_2253 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0