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Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1714 49.52 0 2095993..2097240 - 415 110668690 glyA HQ2791A - glycine hydroxymethyltransferase 1715 45.45 0 2097630..2098454 + 274 110668691 - HQ2792A - hypothetical protein 1716 51.00 0 2098502..2100295 + 597 110668692 - HQ2793A - hypothetical protein 1717 47.82 0 2100441..2101586 - 381 110668693 - HQ2794A - hypothetical protein 1718 50.00 0 2101811..2102620 - 269 110668694 suhB HQ2795A - inositol-1(or 4)-monophosphatase/ fructose-1,6-bisphosphatase, type 1719 46.71 0 2102607..2103047 - 146 110668695 uspA HQ2796A - stress response protein 1720 49.72 0 2103188..2103547 + 119 110668696 - HQ2797A - hypothetical protein 1721 48.14 0 2103801..2104739 + 312 110668697 mch HQ2798A - N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 1722 48.48 0 2104900..2106246 - 448 110668698 caaX HQ2799A - CAAX prenyl proteinase / zinc metalloproteinase 1723 51.20 0 2106602..2108230 - 542 110668699 - HQ2800A - translation elongation factor aEF-1 alpha subunit-like protein 1724 50.87 0 2108901..2109419 - 172 110668700 dnaJ HQ2801A - chaperone protein dnaJ 1725 51.98 0 2109764..2111002 + 412 110668701 - HQ2802A - hypothetical protein 1726 52.86 +1 2111152..2111361 + 69 110668702 - HQ2803A - hypothetical protein 1727 42.22 -1 2112830..2113009 + 59 110668703 - HQ2804A - hypothetical protein 1728 45.34 0 2113045..2113752 - 235 110668704 livF HQ2805A - ABC-type branched-chain amino acid transport systems, ATP-binding protein I 1729 47.09 0 2113754..2114785 - 343 110668705 livG HQ2806A - ABC-type branched-chain amino acid transport systems, ATP-binding protein II 1730 47.57 0 2114782..2116656 - 624 110668706 livM HQ2807A - ABC-type branched-chain amino acid transport system, permease protein II 1731 47.53 0 2116659..2118116 - 485 110668707 livH HQ2808A - ABC-type branched-chain amino acid transport system, permease protein I 1732 48.30 0 2118220..2119575 + 451 110668708 livJ HQ2809A - ABC-type branched-chain amino acid transport systems, substrate-binding protein 1733 48.34 0 2119942..2121240 + 432 110668709 - HQ2810A - hypothetical protein 1734 41.96 -1 2121378..2121632 - 84 110668710 - HQ2811A - hypothetical protein 1735 44.98 0 2121737..2122045 - 102 110668711 - HQ2812A - hypothetical protein 1736 45.48 0 2122263..2122682 + 139 110668712 - HQ2813A - hypothetical protein 1737 43.10 -1 2122710..2123723 - 337 110668713 - HQ2814A - signal-transducing histidine kinase 1738 40.21 -2 2124237..2124527 - 96 110668714 - HQ2815A - hypothetical protein 1739 48.52 0 2125317..2125553 + 78 110668715 - HQ2816A - hypothetical protein 1740 55.46 +1 2125671..2126036 - 121 110668716 - HQ2817A - hypothetical protein 1741 43.04 -1 2126475..2126711 + 78 110668717 - HQ2818A - hypothetical protein 1742 49.39 0 2126989..2128458 - 489 110668718 secY HQ2819A - preprotein translocase subunit SecY 1743 48.48 0 2128474..2128968 - 164 110668719 rpl15p HQ2820A - 50S ribosomal protein L15P 1744 50.54 0 2128965..2129429 - 154 110668720 rpl30p HQ2821A - 50S ribosomal protein L30P 1745 50.91 0 2129429..2130088 - 219 110668721 rps5p HQ2822A - 30S ribosomal protein S5P 1746 52.27 0 2130085..2130702 - 205 110668722 rpl18p HQ2823A - 50S ribosomal protein L18P 1747 51.52 0 2130702..2131163 - 153 110668723 rpl19e HQ2824A - 50S ribosomal protein L19e 1748 51.99 0 2131160..2132113 - 317 110668724 rpl32R HQ2825A - 50S ribosomal protein L32e 1749 49.73 0 2132115..2132663 - 182 110668725 rpl6p HQ2826A - 50S ribosomal protein L6P 1750 47.84 0 2132668..2133060 - 130 110668726 rps8p HQ2827A - 30S ribosomal protein S8P 1751 48.59 0 2133063..2133239 - 58 110668727 rps14P HQ2828A - 30S ribosomal protein S14P 1752 50.00 0 2133246..2133803 - 185 110668728 rpl5p HQ2829A - 50S ribosomal protein L5P 1753 47.49 0 2133800..2134597 - 265 110668729 rps4R HQ2830A - 30S ribosomal protein S4e 1754 49.17 0 2134594..2134953 - 119 110668730 rpl24p HQ2831A - 50S ribosomal protein L24P 1755 51.88 0 2134963..2135361 - 132 110668731 rpl14p HQ2832A - 50S ribosomal protein L14P 1756 56.16 +1 2135361..2135693 - 110 110668732 rps17p HQ2833A - 30S ribosomal protein S17P 1757 49.34 0 2135684..2136370 - 228 110668733 rnpA HQ2834A - ribonuclease P protein component 1 (RNase P component 1) 1758 53.07 +1 2136395..2136622 - 75 110668734 rpl29 HQ2835A - 50S ribosomal protein L29 1759 49.69 0 2136623..2137594 - 323 110668735 rps3p HQ2836A - 30S ribosomal protein S3P 1760 47.17 0 2137594..2138070 - 158 110668736 rpl22p HQ2837A - 50S ribosomal protein L22P 1761 48.94 0 2138097..2138519 - 140 110668737 rps19p HQ2838A - 30S ribosomal protein S19P 1762 51.64 0 2138664..2139395 - 243 110668738 rpl2p HQ2839A - 50S ribosomal protein L2P 1763 38.82 -2 2139399..2139653 - 84 110668739 rplW HQ2840A - 50S ribosomal protein L23 1764 51.67 0 2139650..2140396 - 248 110668740 rpl4lp HQ2841A - 50S ribosomal protein L4P 1765 53.10 +1 2140403..2141419 - 338 110668741 rpl3p HQ2842A - 50S ribosomal protein L3P 1766 55.37 +1 2141424..2142335 - 303 110668742 - HQ2843A - rpl operon protein 1767 48.06 0 2143012..2143758 + 248 110668743 - HQ2844A - hypothetical protein 1768 50.00 0 2143835..2144392 - 185 110668744 - HQ2845A - hypothetical protein 1769 48.48 0 2144396..2144923 - 175 110668745 - HQ2846A - hypothetical protein 1770 50.37 0 2145407..2146609 - 400 110668746 idiB HQ2847A - isopentenyl-diphosphate delta-isomerase 1771 57.30 +2 2147598..2149754 + 718 110668747 capA HQ2849A - poly-gamma-glutamate biosynthesis/capsule biosynthesis protein 1772 48.20 0 2150200..2150811 - 203 110668748 - HQ2850A - translation initiation factor IF-2 subunit beta 1773 45.45 0 2151392..2151622 - 76 110668749 - HQ2851A - hypothetical protein 1774 48.98 0 2151812..2152936 - 374 110668750 dhs HQ2852A - putative deoxyhypusine synthase 1775 46.82 0 2153558..2154328 - 256 110668751 nif3 HQ2853A - hypothetical protein 1776 48.00 0 2154525..2156276 - 583 110668752 - HQ2854A - hypothetical protein 1777 46.83 0 2156386..2156637 - 83 110668753 - HQ2855A - hypothetical protein 1778 44.68 -1 2156640..2157767 - 375 110668754 - HQ2856A - hypothetical protein 1779 47.93 0 2158212..2159081 - 289 110668755 sucD HQ2857A - succinate--CoA ligase, alpha subunit (ADP-forming) 1780 47.38 0 2159078..2160223 - 381 110668756 sucC HQ2858A - succinate--CoA ligase beta subunit (ADP-forming) 1781 47.87 0 2160650..2166379 + 1909 110668757 nrdA HQ2859A - ribonucleoside-diphosphate reductase alpha subunit (intein-containing) 1782 49.47 0 2167497..2168537 + 346 110668758 crtB HQ2860A - geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) 1783 47.47 0 2168848..2169696 - 282 110668759 - HQ2861A - carotenoid biosynthesis protein 1784 46.00 0 2169689..2170564 - 291 110668760 ubiA HQ2862A - prenyltransferase 1785 47.04 0 2170580..2172082 - 500 110668761 crtI HQ2863A - phytoene dehydrogenase (phytoene desaturase) 1786 46.32 0 2172438..2172845 + 135 110668762 - HQ2864A - stress response protein 1787 47.27 0 2173253..2173912 + 219 110668763 - HQ2865A - hypothetical protein 1788 48.30 0 2173937..2174791 + 284 110668764 - HQ2866A - metalloenzyme, TatD related DNAse 1789 46.77 0 2175279..2175866 + 195 110668765 - HQ2867A - hypothetical protein 1790 46.49 0 2176203..2177669 + 488 110668766 mvaB HQ2868A - hydroxymethylglutaryl-CoA synthase 1791 49.09 0 2178030..2178740 - 236 110668767 - HQ2869A - transcriptional regulator 1792 48.65 0 2178991..2179695 + 234 110668768 - HQ2870A - hypothetical protein 1793 46.63 0 2179800..2180393 + 197 110668769 - HQ2871A - acetyltransferase 1794 47.84 0 2180530..2181039 + 169 110668770 - HQ2872A - hypothetical protein 1795 49.07 0 2181109..2182347 - 412 110668771 alaS HQ2873A - alanine--tRNA ligase 1796 51.74 0 2182489..2183004 - 171 110668772 - HQ2874A - transcriptional regulator 1797 55.69 +1 2184972..2185226 - 84 110668773 - HQ2876A - hypothetical protein 1798 41.00 -2 2185884..2186444 + 186 110668774 - HQ2877A - hypothetical protein 1799 49.72 0 2186574..2187464 + 296 110668775 ksgA HQ2878A - dimethyladenosine transferase 1800 48.51 0 2187461..2188099 + 212 110668776 hemK HQ2879A - protein methyltransferase 1801 46.74 0 2188161..2189234 + 357 110668777 metE HQ2880A - 5-methyltetrahydropteroyltriglutamate--homocyste ine S-methyltransferase, methionine synthase II 1802 47.76 0 2189234..2190328 + 364 110668778 metE HQ2881A - methionine synthase 1803 49.27 0 2190523..2190999 - 158 110668779 ndk HQ2882A - nucleoside-diphosphate kinase 1804 49.48 0 2190996..2191187 - 63 110668780 rpl24R HQ2883A - ribosomal protein L24.eR 1805 49.78 0 2191191..2191415 - 74 110668781 rps28e HQ2884A - 30S ribosomal protein S28e 1806 48.76 0 2191422..2191784 - 120 110668782 rpl7ae HQ2885A - 50S ribosomal protein L7Ae 1807 49.38 0 2192204..2192689 + 161 110668783 - HQ2886A - hypothetical protein 1808 50.54 0 2193132..2193776 - 214 110668784 - HQ2887A - hypothetical protein 1809 48.84 0 2193804..2195564 - 586 110668785 gltX HQ2888A - glutamyl-tRNA synthetase 1810 49.57 0 2195740..2196786 - 348 110668786 idsA HQ2889A - trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) 1811 45.90 0 2196788..2198140 - 450 110668787 - HQ2890A - hydrolase 1812 46.58 0 2198718..2198951 + 77 110668788 - HQ2891A - small nuclear ribonucleoprotein (snRNP)-like protein 1813 46.89 0 2198948..2199124 + 58 110668789 rpl37e HQ2892A - 50S ribosomal protein L37e 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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