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Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 303 62.95 0 334411..337044 - 877 39995413 pepN GSU0304 - aminopeptidase N 304 58.69 0 337596..338360 + 254 39995414 hypB GSU0305 - hydrogenase accessory protein HypB 305 64.92 0 338376..340667 + 763 39995415 hypF GSU0306 - hydrogenase maturation protein HypF 306 58.87 0 340674..340904 + 76 39995416 hypC GSU0307 - hydrogenase assembly chaperone hypC/hupF 307 65.84 0 340904..341995 + 363 39995417 hypD GSU0308 - hydrogenase expression/formation protein HypD 308 64.50 0 342016..343029 + 337 39995418 hypE GSU0309 - hydrogenase expression/formation protein HypE 309 61.17 0 343116..343970 + 284 39995419 - GSU0310 - hypothetical protein 310 51.52 -1 344076..344207 - 43 39995420 - GSU0311 - hypothetical protein 311 53.41 -1 344230..344508 + 92 39995421 - GSU0312 - hypothetical protein 312 64.97 0 344584..345351 + 255 39995422 - GSU0313 - dnaJ domain-containing protein 313 60.69 0 345463..346566 + 367 39995423 - GSU0314 - general secretion pathway protein E 314 59.40 0 346535..347002 - 155 39995424 - GSU0315 - hypothetical protein 315 60.78 0 346965..347660 - 231 39995425 - GSU0316 - hypothetical protein 316 58.74 0 348045..348776 + 243 39995426 - GSU0317 - hypothetical protein 317 61.04 0 348883..350127 + 414 39995427 - GSU0318 - M48 family peptidase 318 64.52 0 350163..351002 - 279 39995428 - GSU0319 - hypothetical protein 319 59.38 0 350999..351547 - 182 39995429 - GSU0320 - hypothetical protein 320 65.45 0 351544..352860 - 438 39995430 - GSU0321 - general secretion pathway protein L, putative 321 62.00 0 352860..353780 - 306 39995431 gspK GSU0322 - general secretion pathway protein K 322 62.39 0 353777..354337 - 186 39995432 - GSU0323 - general secretion pathway protein j, putative 323 59.10 0 354384..354740 - 118 39995433 - GSU0324 - general secretion pathway protein I, putative 324 63.83 0 354737..355264 - 175 39995434 - GSU0325 - general secretion pathway protein H, putative 325 60.36 0 355233..355676 - 147 39995435 gspG GSU0326 - general secretion pathway protein G 326 64.11 0 355703..356914 - 403 39995436 - GSU0327 - general secretion pathway protein F 327 64.08 0 356895..358439 - 514 39995437 gspE GSU0328 - general secretion pathway protein E 328 59.98 0 358454..360352 - 632 39995438 - GSU0329 - general secretion pathway protein D, putative 329 60.62 0 360462..361337 - 291 39995439 - GSU0330 - general secretion pathway protein C, putative 330 58.14 0 361506..362900 + 464 39995440 - GSU0331 - trypsin domain/PDZ domain-containing protein 331 59.83 0 362976..364466 + 496 39995441 pepA GSU0332 - aminopeptidase A/I 332 55.80 0 364544..364819 - 91 39995442 atpE GSU0333 - ATP synthase F0, C subunit 333 51.88 -1 364879..365568 - 229 39995443 atpB GSU0334 - ATP synthase F0, A subunit 334 54.26 -1 365573..365959 - 128 39995444 - GSU0335 - hypothetical protein 335 46.75 -2 365931..366176 - 81 39995445 - GSU0336 - hypothetical protein 336 57.32 0 366273..367556 - 427 39995446 hemL GSU0337 - glutamate-1-semialdehyde-2,1-aminomutase 337 48.18 -2 367863..368219 + 118 39995447 nuoA-1 GSU0338 - NADH dehydrogenase I, A subunit 338 55.95 0 368210..368722 + 170 39995448 nuoB GSU0339 - NADH dehydrogenase I, B subunit 339 53.37 -1 368755..369243 + 162 39995449 nuoC GSU0340 - NADH dehydrogenase I, C subunit 340 52.43 -1 369296..370468 + 390 39995450 nouD GSU0341 - NADH dehydrogenase I, D subunit 341 54.60 -1 370496..371017 + 173 39995451 nuoE-1 GSU0342 - NADH dehydrogenase I, E subunit 342 54.00 -1 371053..372828 + 591 39995452 nouF GSU0343 - NADH dehydrogenase I, F subunit 343 54.57 -1 372869..375349 + 826 39995453 - GSU0344 - NADH dehydrogenase I, G subunit, putative 344 52.05 -1 375402..376448 + 348 39995454 nuoH-1 GSU0345 - NADH dehydrogenase I, H subunit 345 47.12 -2 376470..376868 + 132 39995455 nuoI-1 GSU0346 - NADH dehydrogenase I, I subunit 346 50.40 -1 376879..377382 + 167 39995456 nouJ GSU0347 - NADH dehydrogenase I, J subunit 347 45.87 -2 377401..377703 + 100 39995457 nuoK GSU0348 - NADH dehydrogenase I, K subunit 348 51.17 -1 377757..379757 + 666 39995458 nuoL-1 GSU0349 - NADH dehydrogenase I, L subunit 349 51.43 -1 379791..381359 + 522 39995459 nuoM-1 GSU0350 - NADH dehydrogenase I, M subunit 350 51.89 -1 381394..382848 + 484 39995460 nuoN-1 GSU0351 - NADH dehydrogenase I, N subunit 351 56.20 0 382951..383466 + 171 39995461 psaD GSU0352 - thiol peroxidase 352 55.70 0 383605..384051 + 148 39995462 - GSU0353 - hypothetical protein 353 59.36 0 384038..385228 + 396 39995463 - GSU0354 - hypothetical protein 354 56.05 0 385231..385635 + 134 39995464 - GSU0355 - hypothetical protein 355 59.80 0 387351..388952 - 533 39995465 - GSU0357 - cytochrome c family protein 356 61.27 0 388985..389410 - 141 39995466 - GSU0358 - iron-sulfur cluster-binding protein 357 60.42 0 389808..391184 - 458 39995467 - GSU0359 - sensory box protein/sigma-54 dependent transcriptional regulator 358 60.62 0 391444..392733 + 429 39995468 - GSU0360 - OmpA domain-containing protein 359 59.96 0 392844..393737 - 297 39995469 - GSU0361 - peptidyl-prolyl cis-trans isomerase domain-containing protein 360 56.80 0 393987..394442 + 151 39995470 - GSU0362 - hypothetical protein 361 65.40 0 394457..396979 - 840 39995471 dinG GSU0363 - ATP-dependent helicase DinG 362 60.51 0 397076..397351 - 91 39995472 cyd-1 GSU0364 - cytochrome c3 363 60.07 0 397486..397773 - 95 39995473 cyd-2 GSU0365 - cytochrome c3 364 66.45 +1 397904..398824 + 306 39995474 - GSU0366 - transcriptional regulator, putative 365 66.45 +1 398821..399738 + 305 39995475 - GSU0367 - radical SAM family protein 366 61.39 0 399774..401024 - 416 39995476 - GSU0368 - putative lipoprotein 367 65.20 0 401190..401462 - 90 39995477 - GSU0369 - FlhB domain-containing protein 368 69.85 +1 401449..403206 - 585 39995478 - GSU0370 - hypothetical protein 369 64.80 0 403252..405816 - 854 39995479 - GSU0371 - carbohydrate phosphorylase family protein 370 63.71 0 406003..407388 - 461 39995480 - GSU0372 - sigma-54 dependent DNA-binding response regulator 371 61.61 0 407414..408916 - 500 39995481 - GSU0373 - sensor histidine kinase 372 65.77 0 409015..409347 + 110 39995482 hypA GSU0374 - hydrogenase expression/formation protein hupa 373 65.38 0 409470..410558 + 362 39995483 gcvT GSU0375 - glycine cleavage system T protein 374 60.80 0 410614..410988 + 124 39995484 gcvH-1 GSU0376 - glycine cleavage system H protein 375 67.56 +1 410988..412334 + 448 39995485 - GSU0377 - glycine dehydrogenase subunit 1 376 64.18 0 412325..413770 + 481 39995486 - GSU0378 - glycine dehydrogenase subunit 2 377 70.49 +1 413770..414579 + 269 39995487 - GSU0379 - biotin/lipoate A/B protein ligase family protein 378 66.89 +1 414576..415487 + 303 39995488 lipA GSU0380 - lipoyl synthase 379 59.11 0 415484..415708 + 74 39995489 - GSU0381 - putative lipoprotein 380 61.73 0 415717..416121 + 134 39995490 - GSU0382 - hypothetical protein 381 62.00 0 416237..416665 + 142 39995491 - GSU0383 - peptidyl-prolyl cis-trans isomerase, FKBP-type 382 57.65 0 416747..417223 - 158 39995492 - GSU0384 - hypothetical protein 383 65.20 0 417404..418288 + 294 39995493 - GSU0385 - NADH dehydrogenase subunit, putative 384 63.77 0 418326..419015 - 229 39995494 radC GSU0386 - DNA repair protein RadC 385 63.33 0 419107..419916 - 269 39995495 - GSU0387 - undecaprenol kinase, putative 386 56.47 0 420116..420733 + 205 39995496 - GSU0388 - hypothetical protein 387 60.48 0 420726..421727 + 333 39995497 - GSU0389 - phosphate transporter, putative 388 59.83 0 421780..422262 - 160 39995498 - GSU0390 - hypothetical protein 389 65.53 0 422509..423822 + 437 39995499 - GSU0391 - Outer membrane efflux family protein 390 67.21 +1 423819..424931 + 370 39995500 - GSU0392 - RND family efflux transporter MFP subunit 391 65.00 0 424968..425147 + 59 39995501 - GSU0393 - hypothetical protein 392 62.93 0 425153..428386 + 1077 39995502 - GSU0394 - AcrB/AcrD/AcrF family protein 393 63.17 0 428361..428789 + 142 39995503 - GSU0395 - hypothetical protein 394 55.40 0 428803..429015 + 70 39995504 - GSU0396 - hypothetical protein 395 64.86 0 429012..429842 + 276 39995505 - GSU0397 - metallo-beta-lactamase family protein 396 64.71 0 429887..430243 + 118 39995506 - GSU0398 - phage shock protein E, putative 397 66.67 +1 430266..430541 + 91 39995507 - GSU0399 - ArsR family transcriptional regulator 398 62.42 0 430815..432464 + 549 39995508 - GSU0400 - methyl-accepting chemotaxis protein 399 59.57 0 432601..434220 + 539 39995509 - GSU0401 - methyl-accepting chemotaxis protein, putative 400 54.41 -1 434398..434805 + 135 39995510 - GSU0402 - hemerythrin family protein 401 55.65 0 434966..435328 + 120 39995511 cheY-1 GSU0403 - chemotaxis protein CheY 402 56.80 0 435325..435831 + 168 39995512 - GSU0404 - hypothetical protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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