version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1550 66.18 +1 1713165..1714403 + 412 39996660 - GSU1560 - radical SAM domain-containing protein 1551 64.35 0 1714573..1716561 + 662 39996661 - GSU1561 - 1A family penicillin-binding protein 1552 63.33 0 1716575..1716874 + 99 39996662 - GSU1562 - hypothetical protein 1553 56.25 0 1716856..1716951 - 31 39996663 - GSU1563 - hypothetical protein 1554 63.51 0 1717831..1719891 + 686 39996664 - GSU1564 - Glu/Leu/Phe/Val dehydrogenase family protein 1555 58.85 0 1719920..1720111 + 63 39996665 - GSU1565 - hypothetical protein 1556 54.47 -1 1720220..1720678 + 152 39996666 - GSU1566 - hypothetical protein 1557 61.44 0 1721015..1721875 + 286 39996667 - GSU1567 - M48 family peptidase 1558 58.84 0 1721898..1722191 + 97 39996668 - GSU1568 - hypothetical protein 1559 49.54 -2 1722264..1722479 + 71 39996669 - GSU1569 - CopG family transcriptional regulator 1560 53.33 -1 1722702..1723646 + 314 39996670 - GSU1570 - TerC family membrane protein 1561 61.20 0 1723859..1724956 + 365 39996671 - GSU1571 - hypothetical protein 1562 58.71 0 1725013..1725540 + 175 39996672 - GSU1572 - riboflavin biosynthesis protein RibD domain-containing protein 1563 57.94 0 1725783..1726538 + 251 39996673 - GSU1573 - CAAX amino terminal protease family protein 1564 57.68 0 1726535..1726801 + 88 39996674 - GSU1574 - hypothetical protein 1565 62.14 0 1726864..1727592 + 242 39996675 - GSU1575 - hypothetical protein 1566 58.98 0 1727617..1728423 + 268 39996676 - GSU1576 - short chain dehydrogenase/reductase family oxidoreductase 1567 61.96 0 1729228..1729758 + 176 39996677 cobO GSU1577 - cob(I)alamin adenosyltransferase 1568 62.22 0 1729770..1730174 + 134 39996678 - GSU1578 - B12-binding protein 1569 62.81 0 1730261..1731220 + 319 39996679 - GSU1579 - LAO/AO transport system ATPase 1570 59.14 0 1731236..1732165 + 309 39996680 - GSU1580 - ErfK/YbiS/YcfS/YnhG family protein 1571 60.84 0 1732220..1734862 + 880 39996681 - GSU1581 - polyA polymerase family protein 1572 60.65 0 1734899..1736260 - 453 39996682 bioA GSU1582 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase 1573 61.96 0 1736253..1736975 - 240 39996683 bioD GSU1583 - dethiobiotin synthase 1574 60.51 0 1736968..1737957 - 329 39996684 bioB GSU1584 - biotin synthetase 1575 56.67 0 1738189..1738668 + 159 39996685 - GSU1585 - hypothetical protein 1576 58.64 0 1738694..1739851 + 385 39996686 nusA GSU1586 - transcription elongation factor NusA 1577 58.09 0 1739855..1740472 + 205 39996687 - GSU1587 - ribosomal protein L7Ae family protein 1578 59.95 0 1740450..1743101 + 883 39996688 infB GSU1588 - translation initiation factor IF-2 1579 53.78 -1 1743169..1743525 + 118 39996689 rbfA GSU1589 - ribosome-binding factor A 1580 56.26 0 1743518..1744468 + 316 39996690 - GSU1590 - DHH domain-containing protein 1581 58.47 0 1744474..1745388 + 304 39996691 truB GSU1591 - tRNA pseudouridine synthase B 1582 52.43 -1 1745512..1745778 + 88 39996692 rpsO GSU1592 - 30S ribosomal protein S15 1583 58.26 0 1746052..1748145 + 697 39996693 pnp GSU1593 - polynucleotide phosphorylase/polyadenylase 1584 53.38 -1 1748190..1749446 + 418 39996694 - GSU1594 - M16 family peptidase 1585 59.11 0 1749458..1749907 + 149 39996695 dut GSU1595 - deoxyuridine 5'-triphosphate nucleotidohydrolase 1586 54.41 -1 1749952..1750563 + 203 39996696 - GSU1596 - Sua5/YciO/YrdC/YwlC family protein 1587 57.30 0 1750565..1750927 + 120 39996697 - GSU1597 - hypothetical protein 1588 52.96 -1 1751112..1751651 + 179 39996698 - GSU1598 - hypothetical protein 1589 55.19 -1 1751673..1751855 + 60 39996699 rpmF GSU1599 - 50S ribosomal protein L32 1590 54.56 -1 1751901..1752941 + 346 39996700 plsX GSU1600 - putative glycerol-3-phosphate acyltransferase PlsX 1591 57.77 0 1752957..1753934 + 325 39996701 fabH-2 GSU1601 - 3-oxoacyl-(acyl-carrier-protein) synthase III 1592 61.69 0 1753957..1754880 + 307 39996702 fabD GSU1602 - malonyl CoA-acyl carrier protein transacylase 1593 58.84 0 1754891..1755631 + 246 39996703 fabG-2 GSU1603 - 3-oxoacyl-(acyl-carrier-protein) reductase 1594 50.43 -1 1755718..1755951 + 77 39996704 acpP-2 GSU1604 - acyl carrier protein 1595 58.07 0 1756090..1757322 + 410 39996705 fabF-2 GSU1605 - 3-oxoacyl-(acyl-carrier-protein) synthase II 1596 61.52 0 1757333..1757779 + 148 39996706 - GSU1606 - ribose 5-phosphate isomerase B, putative 1597 58.01 0 1757872..1759119 + 415 39996707 glyA GSU1607 - serine hydroxymethyltransferase 1598 58.66 0 1759240..1760013 + 257 39996708 - GSU1608 - hypothetical protein 1599 58.27 0 1760201..1761700 + 499 39996709 - GSU1609 - outer membrane efflux protein 1600 61.77 0 1761729..1762913 + 394 39996710 - GSU1610 - RND family efflux transporter MFP subunit 1601 59.79 0 1762910..1766008 + 1032 39996711 - GSU1611 - AcrB/AcrD/AcrF family protein 1602 60.75 0 1766005..1766748 + 247 39996712 gpm GSU1612 - phosphoglycerate mutase 1603 60.72 0 1766767..1767624 - 285 39996713 - GSU1613 - A/G-specific adenine glycosylase, putative 1604 56.79 0 1767621..1768025 - 134 39996714 - GSU1614 - CoA-binding protein 1605 54.38 -1 1768108..1769385 - 425 39996715 - GSU1615 - hypothetical protein 1606 54.55 -1 1769602..1770831 - 409 39996716 - GSU1616 - ImpB/MucB/SamB family protein 1607 57.03 0 1770881..1771492 - 203 39996717 lexA-2 GSU1617 - LexA repressor 1608 58.56 0 1771700..1772563 - 287 39996718 - GSU1618 - hypothetical protein 1609 55.00 -1 1772610..1772969 - 119 39996719 cheY-4 GSU1619 - chemotaxis protein CheY 1610 59.61 0 1773123..1775249 - 708 39996720 - GSU1620 - iron-sulfur cluster binding protein, putative 1611 58.53 0 1775253..1775891 - 212 39996721 - GSU1621 - hypothetical protein 1612 58.41 0 1776004..1777953 + 649 39996722 - GSU1622 - L-lactate permease 1613 62.08 0 1778047..1779420 + 457 39996723 - GSU1623 - glycolate oxidase subunit GlcD, putative 1614 61.63 0 1779431..1780681 + 416 39996724 - GSU1624 - glycolate oxidase iron-sulfur subunit, putative 1615 46.24 -2 1780730..1780822 - 30 39996725 - GSU1625 - hypothetical protein 1616 55.37 0 1780852..1781577 + 241 39996726 - GSU1626 - GntR family transcriptional regulator 1617 59.89 0 1781917..1782285 - 122 39996727 secG GSU1627 - preprotein translocase subunit SecG 1618 57.71 0 1782373..1784337 - 654 39996728 - GSU1628 - phosphoglycerate kinase/triosephosphate isomerase 1619 57.49 0 1784444..1785445 - 333 39996729 gap GSU1629 - glyceraldehyde 3-phosphate dehydrogenase 1 1620 52.74 -1 1785617..1787749 + 710 39996730 - GSU1630 - sensory box histidine kinase 1621 59.79 0 1787907..1788677 + 256 39996731 - GSU1631 - metallo-beta-lactamase family protein 1622 58.87 0 1788897..1790192 + 431 39996732 purB GSU1632 - adenylosuccinate lyase 1623 55.98 0 1790185..1791279 + 364 39996733 - GSU1633 - hypothetical protein 1624 61.45 0 1791280..1794270 + 996 39996734 - GSU1634 - phosphoribosylformylglycinamidine synthase II, putative 1625 59.78 0 1794274..1795101 + 275 39996735 - GSU1635 - phosphoribosylformylglycinamidine synthase I, putative 1626 59.54 0 1795135..1796538 + 467 39996736 purF GSU1636 - amidophosphoribosyltransferase 1627 57.19 0 1796556..1797104 + 182 39996737 pyrE GSU1637 - orotate phosphoribosyltransferase 1628 60.09 0 1797177..1797875 + 232 39996738 - GSU1638 - hypothetical protein 1629 59.37 0 1797963..1798373 + 136 39996739 - GSU1639 - Rrf2 family protein 1630 58.24 0 1798517..1799869 + 450 39996740 cydA GSU1640 - cytochrome d ubiquinol oxidase, subunit I 1631 58.50 0 1799871..1800899 + 342 39996741 cydB GSU1641 - cytochrome d ubiquinol oxidase, subunit II 1632 53.13 -1 1801229..1801723 - 164 39996742 - GSU1642 - hypothetical protein 1633 58.89 0 1801850..1802800 + 316 39996743 - GSU1643 - GGDEF/response regulator receiver domain-containing protein 1634 59.11 0 1802943..1804622 + 559 39996744 - GSU1644 - putative ABC transporter ATP-binding protein 1635 56.04 0 1804716..1805741 - 341 39996745 - GSU1646 - putative lipoprotein 1636 41.41 -2 1804900..1804998 + 32 39996746 - GSU1645 - hypothetical protein 1637 51.74 -1 1805933..1806133 - 66 39996747 - GSU1647 - hypothetical protein 1638 57.56 0 1806404..1807216 - 270 39996748 - GSU1648 - cytochrome c family protein 1639 58.51 0 1807213..1808316 - 367 39996749 - GSU1649 - cytochrome b/b6 1640 62.38 0 1808325..1808744 - 139 39996750 - GSU1650 - cytochrome b/b6 complex, iron-sulfur subunit 1641 56.48 0 1809102..1810043 + 313 39996751 fbP-1 GSU1651 - fructose-1,6-bisphosphatase 1642 57.41 0 1810079..1810348 + 89 39996752 - GSU1652 - hypothetical protein 1643 59.01 0 1810491..1811927 + 478 39996753 - GSU1653 - sigma-54 dependent DNA-binding response regulator 1644 57.24 0 1812034..1813083 - 349 39996754 - GSU1654 - response regulator, putative 1645 56.40 0 1813112..1815586 - 824 39996755 - GSU1655 - sensory box histidine kinase/response regulator 1646 53.44 -1 1815737..1816999 - 420 39996756 - GSU1656 - sensory box/response regulator 1647 58.85 0 1817400..1819715 + 771 39996757 - GSU1657 - DNA internalization-related competence protein ComEC/Rec2 1648 54.83 -1 1819776..1821152 + 458 39996758 - GSU1658 - response regulator/GGDEF domain-containing protein 1649 58.29 0 1821195..1822436 + 413 39996759 hisS GSU1659 - histidyl-tRNA synthetase 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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