version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1240 54.73 -1 1349931..1350332 - 133 39996350 - GSU1248 - ISL3 family transposase truncation 1241 59.37 0 1350455..1352029 + 524 39996351 - GSU1249 - sensory box histidine kinase 1242 61.35 0 1352057..1353466 + 469 39996352 - GSU1250 - sigma-54 dependent DNA-binding response regulator 1243 65.23 0 1353842..1360090 + 2082 39996353 - GSU1251 - BNR repeat-containing protein 1244 64.41 0 1360117..1365075 + 1652 39996354 - GSU1252 - hypothetical protein 1245 63.92 0 1365114..1367153 + 679 39996355 - GSU1253 - hypothetical protein 1246 67.41 +1 1367157..1368500 + 447 39996356 - GSU1254 - hypothetical protein 1247 58.46 0 1368521..1369105 + 194 39996357 - GSU1255 - hypothetical protein 1248 59.13 0 1369123..1369746 + 207 39996358 - GSU1256 - hypothetical protein 1249 62.73 0 1369743..1371368 + 541 39996359 - GSU1257 - ABC transporter, periplasmic-substrate binding protein, putative 1250 59.83 0 1371459..1371941 + 160 39996360 nosL GSU1258 - nosL protein 1251 61.11 0 1372001..1372252 + 83 39996361 - GSU1259 - hypothetical protein 1252 62.33 0 1372290..1373372 + 360 39996362 - GSU1260 - ABC transporter, permease protein 1253 64.47 0 1373374..1374057 + 227 39996363 - GSU1261 - ABC transporter, ATP-binding protein 1254 62.15 0 1374054..1375049 + 331 39996364 - GSU1262 - hypothetical protein 1255 60.61 0 1375122..1375418 - 98 39996365 - GSU1263 - hypothetical protein 1256 63.17 0 1375498..1375812 - 104 39996366 - GSU1264 - hypothetical protein 1257 61.73 0 1375825..1377162 - 445 39996367 - GSU1265 - sensor histidine kinase/response regulator 1258 60.23 0 1377368..1379170 + 600 39996368 lepA GSU1266 - GTP-binding protein LepA 1259 56.05 0 1379195..1379863 + 222 39996369 lepB GSU1267 - signal peptidase I 1260 57.64 0 1379856..1380863 - 335 39996370 - GSU1268 - LysR family transcriptional regulator 1261 62.29 0 1381020..1384445 - 1141 39996371 - GSU1269 - hypothetical protein 1262 62.92 0 1385037..1385570 + 177 39996372 pyrR GSU1270 - pyrimidine regulatory protein PyrR 1263 63.46 0 1385636..1386571 + 311 39996373 pyrB GSU1271 - aspartate carbamoyltransferase catalytic subunit 1264 64.16 0 1386623..1387900 + 425 39996374 pyrC GSU1272 - dihydroorotase, multifunctional complex type 1265 62.58 0 1387991..1389115 + 374 39996375 carA GSU1273 - carbamoyl phosphate synthase small subunit 1266 62.81 0 1389118..1390077 + 319 39996376 - GSU1274 - radical SAM domain-containing protein 1267 56.06 0 1390079..1390408 + 109 39996377 - GSU1275 - hypothetical protein 1268 61.61 0 1390449..1393694 + 1081 39996378 carB GSU1276 - carbamoyl-phosphate synthase, large subunit 1269 58.91 0 1393780..1394256 + 158 39996379 greA GSU1277 - transcription elongation factor GreA 1270 55.05 -1 1394329..1394526 + 65 39996380 - GSU1278 - hypothetical protein 1271 64.05 0 1394709..1395740 + 343 39996381 - GSU1279 - cobalamin biosynthesis protein CbiM, putative 1272 63.71 0 1395768..1396580 + 270 39996382 - GSU1280 - cobalt ABC transporter, permease protein 1273 61.07 0 1396577..1397326 + 249 39996383 - GSU1281 - cobalt ABC transporter, ATP-binding protein 1274 59.01 0 1397350..1398942 + 530 39996384 - GSU1282 - hypothetical protein 1275 58.78 0 1399078..1399635 + 185 39996385 - GSU1283 - hypothetical protein 1276 57.48 0 1399684..1400151 + 155 39996386 - GSU1284 - cytochrome c, putative 1277 62.40 0 1400351..1402669 + 772 39996387 - GSU1285 - sensory box sensor histidine kinase/response regulator 1278 57.83 0 1402706..1403101 + 131 39996388 cheY-2 GSU1286 - chemotaxis protein CheY 1279 61.89 0 1403232..1405115 + 627 39996389 - GSU1287 - methyl accepting chemotaxis protein, putative 1280 58.79 0 1405120..1405500 - 126 39996390 - GSU1288 - hypothetical protein 1281 59.02 0 1405494..1405859 + 121 39996391 cheY-3 GSU1289 - chemotaxis protein CheY 1282 62.16 0 1405859..1407964 + 701 39996392 cheA-1 GSU1290 - chemotaxis protein CheA 1283 54.57 -1 1408182..1408553 + 123 39996393 - GSU1291 - response regulator 1284 58.79 0 1408577..1409731 + 384 39996394 - GSU1292 - sensory box histidine kinase 1285 58.22 0 1409987..1410637 + 216 39996395 - GSU1293 - LuxR family DNA-binding response regulator 1286 59.40 0 1410931..1413819 + 962 39996396 - GSU1294 - methyl-accepting chemotaxis protein 1287 58.75 0 1414022..1414741 + 239 39996397 - GSU1295 - hypothetical protein 1288 61.07 0 1414746..1416926 + 726 39996398 - GSU1296 - sensory box histidine kinase/response regulator 1289 55.34 0 1416989..1418074 + 361 39996399 - GSU1297 - ISGsu2, transposase 1290 57.35 0 1418548..1420254 + 568 39996400 - GSU1298 - methyl-accepting chemotaxis protein 1291 61.01 0 1420264..1420758 + 164 39996401 cheW GSU1299 - purine-binding chemotaxis protein CheW 1292 57.86 0 1421178..1422869 + 563 39996402 - GSU1300 - methyl-accepting chemotaxis protein 1293 60.00 0 1422879..1423373 + 164 39996403 cheW-5 GSU1301 - purine-binding chemotaxis protein CheW 1294 61.32 0 1423689..1426196 + 835 39996404 - GSU1302 - sensor histidine kinase/response regulator 1295 60.74 0 1426553..1428037 + 494 39996405 - GSU1303 - methyl-accepting chemotaxis protein 1296 62.08 0 1428274..1429974 + 566 39996406 - GSU1304 - methyl-accepting chemotaxis protein 1297 61.64 0 1430144..1431496 - 450 39996407 - GSU1305 - glutamate dehydrogenase 1298 62.85 0 1431807..1433351 + 514 39996408 - GSU1306 - phosphotransferase domain-containing protein 1299 57.85 0 1433423..1433944 + 173 39996409 ftn GSU1307 - ferritin 1300 52.05 -1 1434028..1434246 + 72 39996410 - GSU1308 - hypothetical protein 1301 62.11 0 1434527..1435756 + 409 39996411 - GSU1309 - hypothetical protein 1302 68.76 +1 1435797..1436897 - 366 39996412 - GSU1310 - pyridine nucleotide-disulphide oxidoreductase family protein 1303 65.97 0 1436894..1438483 - 529 39996413 pgi GSU1311 - glucose-6-phosphate isomerase 1304 68.06 +1 1438500..1439507 - 335 39996414 - GSU1312 - radical SAM domain-containing protein 1305 62.46 0 1439519..1439851 - 110 39996415 - GSU1313 - carboxymuconolactone decarboxylase 1306 62.85 0 1439851..1440531 - 226 39996416 - GSU1314 - hypothetical protein 1307 70.82 +1 1440620..1442137 - 505 39996417 merA-1 GSU1315 - mercuric reductase 1308 60.92 0 1442251..1443225 - 324 39996418 - GSU1316 - response regulator 1309 58.31 0 1443412..1444380 + 322 39996419 ispB GSU1317 - octaprenyl-diphosphate synthase 1310 57.09 0 1444534..1444794 + 86 39996420 - GSU1318 - hypothetical protein 1311 64.31 0 1444965..1446068 + 367 39996421 - GSU1319 - sensor histidine kinase 1312 64.06 0 1446088..1447470 + 460 39996422 - GSU1320 - sigma-54 dependent DNA-binding response regulator 1313 61.34 0 1447467..1447973 + 168 39996423 - GSU1321 - thioredoxin family protein 1314 59.53 0 1447999..1448727 + 242 39996424 ccdA GSU1322 - cytochrome c biogenesis protein CcdA 1315 64.41 0 1448729..1449172 + 147 39996425 - GSU1323 - hypothetical protein 1316 65.12 0 1449605..1449928 - 107 39996426 - GSU1324 - RNA-binding protein 1317 58.43 0 1449947..1450213 - 88 39996427 - GSU1325 - hypothetical protein 1318 68.25 +1 1450443..1452587 + 714 39996428 recG GSU1326 - ATP-dependent DNA helicase RecG 1319 70.53 +1 1452599..1453555 + 318 39996429 - GSU1327 - homocysteine S-methyltransferase domain-containing protein 1320 61.59 0 1453592..1453906 + 104 39996430 - GSU1328 - hypothetical protein 1321 71.96 +2 1453943..1454887 + 314 39996431 - GSU1329 - tRNA synthetase class I domain-containing protein 1322 65.52 0 1454915..1456396 + 493 39996432 - GSU1330 - metal ion efflux outer membrane protein family protein, putative 1323 65.34 0 1456420..1457775 + 451 39996433 - GSU1331 - RND family efflux transporter MFP subunit 1324 63.67 0 1457786..1460923 + 1045 39996434 - GSU1332 - CzcA family heavy metal efflux protein 1325 58.02 0 1460959..1461432 + 157 39996435 - GSU1333 - hypothetical protein 1326 66.74 +1 1461505..1462944 - 479 39996436 - GSU1334 - cytochrome c family protein 1327 65.74 0 1462919..1463026 + 35 39996437 - GSU1335 - hypothetical protein 1328 60.70 0 1463178..1463915 - 245 39996438 - GSU1336 - TerC family membrane protein 1329 62.63 0 1463922..1465109 + 395 39996439 - GSU1337 - hypothetical protein 1330 67.16 +1 1465350..1465754 + 134 39996440 - GSU1338 - heavy metal-binding domain-containing protein 1331 65.41 0 1465871..1466347 + 158 39996441 - GSU1339 - hypothetical protein 1332 65.12 0 1466389..1467549 + 386 39996442 - GSU1340 - ABC transporter, permease protein 1333 65.96 0 1467582..1468286 + 234 39996443 - GSU1341 - ABC transporter, ATP-binding protein 1334 63.37 0 1468634..1469542 - 302 39996444 - GSU1342 - LysR family transcriptional regulator 1335 61.93 0 1469681..1470334 + 217 39996445 - GSU1343 - isochorismatase family protein 1336 66.67 +1 1470445..1472256 + 603 39996446 - GSU1344 - hypothetical protein 1337 63.42 0 1472572..1473033 + 153 39996447 - GSU1345 - Rrf2 family protein 1338 65.78 0 1473101..1474114 + 337 39996448 cysP GSU1346 - sulfate ABC transporter, periplasmic sulfate-binding protein 1339 67.33 +1 1474119..1475021 + 300 39996449 cysT GSU1347 - sulfate ABC transporter, permease protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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