version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2952 55.29 0 3315234..3316640 + 468 170082615 ygjG ECDH10B_3248 - putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent 2953 52.55 0 3316682..3317014 - 110 170082616 ygjH ECDH10B_3249 - hypothetical protein 2954 51.73 0 3317233..3318216 + 327 170082617 ebgR ECDH10B_3250 - DNA-binding transcriptional repressor 2955 54.54 0 3318400..3321492 + 1030 170082618 ebgA ECDH10B_3251 - cryptic beta-D-galactosidase, alpha subunit 2956 45.56 -1 3321489..3321938 + 149 170082619 ebgC ECDH10B_3252 - cryptic beta-D-galactosidase, beta subunit 2957 49.65 0 3322001..3323434 + 477 170082620 ygjI ECDH10B_3253 - transporter 2958 51.91 0 3323568..3324638 + 356 170082621 ygjJ ECDH10B_3254 - hypothetical protein 2959 54.46 0 3324655..3327006 + 783 170082622 ygjK ECDH10B_3255 - glycosyl hydrolase 2960 57.21 +1 3327432..3329450 + 672 170082623 fadH ECDH10B_3256 - 2,4-dienoyl-CoA reductase, NADH and FMN-linked 2961 48.44 0 3329495..3329911 - 138 170082624 ygjM ECDH10B_3257 - DNA-binding transcriptional regulator 2962 38.41 -2 3329908..3330222 - 104 170082625 ygjN ECDH10B_3258 - hypothetical protein 2963 53.83 0 3330506..3331642 - 378 170082626 ygjO ECDH10B_3259 - methyltransferase small subunit 2964 50.79 0 3331727..3332230 + 167 170082627 ygjP ECDH10B_3260 - metal dependent hydrolase 2965 51.52 0 3332307..3332999 + 230 170082628 ygjQ ECDH10B_3261 - thioredoxin-like protein 2966 52.54 0 3333060..3334064 + 334 170082629 ygjR ECDH10B_3262 - NAD(P)-binding dehydrogenase 2967 54.04 0 3334347..3335312 + 321 170082630 alx ECDH10B_3264 - inner membrane protein, part of terminus 2968 55.18 0 3335711..3336955 + 414 170082631 sstT ECDH10B_3265 - sodium:serine/threonine symporter 2969 49.64 0 3336960..3337511 - 183 170082632 ygjV ECDH10B_3266 - inner membrane protein 2970 53.70 0 3337594..3339081 - 495 170082633 uxaA ECDH10B_3267 - altronate hydrolase 2971 54.28 0 3339096..3340508 - 470 170082634 uxaC ECDH10B_3268 - uronate isomerase 2972 54.26 0 3340871..3342289 + 472 170082635 exuT ECDH10B_3269 - hexuronate transporter 2973 50.58 0 3342419..3343195 + 258 170082636 exuR ECDH10B_3270 - DNA-binding transcriptional repressor 2974 50.68 0 3343540..3344202 + 220 170082637 yqjA ECDH10B_3271 - inner membrane protein 2975 53.91 0 3344206..3344589 + 127 170082638 yqjB ECDH10B_3272 - hypothetical protein 2976 48.78 0 3344736..3345104 + 122 170082639 yqjC ECDH10B_3273 - hypothetical protein 2977 54.90 0 3345142..3345447 + 101 170082640 yqjD ECDH10B_3274 - hypothetical protein 2978 52.84 0 3345450..3345854 + 134 170082641 yqjE ECDH10B_3275 - inner membrane protein 2979 56.67 +1 3345844..3346143 + 99 170082642 yqjK ECDH10B_3276 - hypothetical protein 2980 48.85 0 3346329..3346721 + 130 170082643 yqjF ECDH10B_3277 - quinol oxidase subunit 2981 51.17 0 3346791..3347777 + 328 170082644 yqjG ECDH10B_3278 - S-transferase 2982 51.91 0 3348071..3348436 + 121 170082645 yhaH ECDH10B_3279 - inner membrane protein 2983 44.82 -1 3348678..3349034 + 118 170082646 yhaI ECDH10B_3280 - inner membrane protein 2984 55.30 0 3349085..3349981 - 298 170082647 yhaJ ECDH10B_3281 - DNA-binding transcriptional regulator 2985 53.42 0 3350086..3350787 + 233 170082648 yhaK ECDH10B_3282 - pirin-related protein 2986 52.12 0 3350810..3350974 + 54 170082649 yhaL ECDH10B_3283 - hypothetical protein 2987 56.90 +1 3351108..3352418 - 436 170082650 yhaM ECDH10B_3284 - hypothetical protein 2988 50.35 0 3352446..3353714 - 422 170082651 yhaO ECDH10B_3285 - transporter 2989 53.41 0 3354052..3355416 - 454 170082652 tdcG ECDH10B_3286 - L-serine dehydratase 3 2990 52.56 0 3355488..3355877 - 129 170082653 tdcF ECDH10B_3287 - L-PSP (mRNA) endoribonuclease 2991 53.12 0 3355891..3358185 - 764 170082654 tdcE ECDH10B_3288 - pyruvate formate-lyase 4/2-ketobutyrate formate-lyase 2992 48.16 0 3358219..3359439 - 406 170082655 tdcD ECDH10B_3289 - propionate kinase/acetate kinase C, anaerobic 2993 49.85 0 3359453..3360784 - 443 170082656 tdcC ECDH10B_3290 - L-threonine/L-serine transporter 2994 46.36 -1 3360806..3361795 - 329 170082657 tdcB ECDH10B_3291 - catabolic threonine dehydratase, PLP-dependent 2995 42.17 -1 3361894..3362832 - 312 170082658 tdcA ECDH10B_3292 - DNA-binding transcriptional activator 2996 28.77 -2 3363147..3363365 + 72 170082659 tdcR ECDH10B_3293 - DNA-binding transcriptional activator 2997 35.56 -2 3363621..3364160 + 179 170082660 yhaB ECDH10B_3294 - hypothetical protein 2998 31.82 -2 3364182..3365369 + 395 170082661 yhaC ECDH10B_3295 - hypothetical protein 2999 53.87 0 3366392..3367618 - 408 170082662 garK ECDH10B_3297 - glycerate kinase I 3000 52.86 0 3367634..3368524 - 296 170082663 garR ECDH10B_3298 - tartronate semialdehyde reductase 3001 52.92 0 3368554..3369324 - 256 170082664 garL ECDH10B_3299 - alpha-dehydro-beta-deoxy-D-glucarate aldolase 3002 51.31 0 3369340..3370674 - 444 170082665 garP ECDH10B_3300 - (D)-galactarate transporter 3003 52.86 0 3371049..3372620 + 523 170082666 garD ECDH10B_3301 - (D)-galactarate dehydrogenase 3004 47.62 0 3372769..3373104 + 111 170082667 sohA ECDH10B_3302 - regulator 3005 43.87 -1 3373104..3373568 + 154 170082668 yhaV ECDH10B_3303 - hypothetical protein 3006 52.22 0 3373623..3374432 - 269 170082669 agaR ECDH10B_3304 - DNA-binding transcriptional dual regulator 3007 55.27 0 3374681..3375961 + 426 170082670 kbaZ ECDH10B_3305 - tagatose 6-phosphate aldolase 1, kbaZ subunit 3008 50.63 0 3375984..3376457 + 157 170082671 agaV ECDH10B_3306 - N-acetylgalactosamine-specific enzyme IIB component of PTS 3009 56.94 +1 3376889..3377392 + 167 170082672 agaA ECDH10B_3308 - hypothetical protein 3010 56.62 +1 3377743..3378897 + 384 170082673 agaS ECDH10B_3309 - tagatose-6-phosphate ketose/aldose isomerase 3011 52.03 0 3378910..3379770 + 286 170082674 kbaY ECDH10B_3310 - tagatose 6-phosphate aldolase 1, kbaY subunit 3012 44.03 -1 3379937..3380413 + 158 170082675 agaB ECDH10B_3311 - N-acetylgalactosamine-specific enzyme IIB component of PTS 3013 51.37 0 3380452..3381255 + 267 170082676 agaC ECDH10B_3312 - N-acetylgalactosamine-specific enzyme IIC component of PTS 3014 49.37 0 3381245..3382036 + 263 170082677 agaD ECDH10B_3313 - N-acetylgalactosamine-specific enzyme IID component of PTS 3015 50.26 0 3382037..3382792 + 251 170082678 agaI ECDH10B_3314 - galactosamine-6-phosphate isomerase 3016 45.13 -1 3383193..3383777 + 194 170082679 yraH ECDH10B_3315 - fimbrial-like adhesin protein 3017 44.25 -1 3383857..3384552 + 231 170082680 yraI ECDH10B_3316 - periplasmic pilin chaperone 3018 47.60 0 3384581..3387097 + 838 170082681 yraJ ECDH10B_3317 - outer membrane protein 3019 47.89 0 3387108..3388199 + 363 170082682 yraK ECDH10B_3318 - fimbrial-like adhesin protein 3020 54.59 0 3388242..3389102 - 286 170082683 yraL ECDH10B_3319 - methyltransferase 3021 54.05 0 3389167..3391203 + 678 170082684 yraM ECDH10B_3320 - hypothetical protein 3022 54.55 0 3391161..3391556 + 131 170082685 yraN ECDH10B_3321 - hypothetical protein 3023 50.25 0 3391576..3392166 + 196 170082686 diaA ECDH10B_3322 - DnaA initiator-associating factor 3024 54.34 0 3392176..3392751 + 191 170082687 yraP ECDH10B_3323 - hypothetical protein 3025 57.73 +1 3392865..3393905 - 346 170082688 yraQ ECDH10B_3324 - permease 3026 54.87 0 3393978..3394613 - 211 170082689 yraR ECDH10B_3325 - nucleoside-diphosphate-sugar epimerase 3027 50.29 0 3394741..3395259 + 172 170082690 yhbO ECDH10B_3326 - intracellular protease 3028 53.83 0 3395239..3395682 - 147 170082691 yhbP ECDH10B_3327 - hypothetical protein 3029 54.46 0 3395733..3396035 + 100 170082692 yhbQ ECDH10B_3328 - endonuclease 3030 55.56 0 3396022..3396525 - 167 170082693 yhbS ECDH10B_3329 - acyltransferase 3031 51.81 0 3396519..3397043 - 174 170082694 yhbT ECDH10B_3330 - lipid carrier protein 3032 56.83 +1 3397252..3398247 + 331 170082695 yhbU ECDH10B_3331 - peptidase (collagenase-like) 3033 55.97 +1 3398256..3399134 + 292 170082696 yhbV ECDH10B_3332 - protease 3034 55.85 0 3399215..3400222 + 335 170082697 yhbW ECDH10B_3333 - hypothetical protein 3035 53.09 0 3400340..3401584 - 414 170082698 mtr ECDH10B_3334 - tryptophan transporter of high affinity 3036 55.56 0 3401738..3403627 - 629 170082699 deaD ECDH10B_3335 - ATP-dependent RNA helicase 3037 48.25 0 3403807..3404691 - 294 170082700 nlpI ECDH10B_3336 - hypothetical protein 3038 53.70 0 3404800..3407004 - 734 170082701 pnp ECDH10B_3337 - polynucleotide phosphorylase/polyadenylase 3039 51.85 0 3407182..3407451 - 89 170082702 rpsO ECDH10B_3339 - 30S ribosomal subunit protein S15 3040 52.49 0 3407600..3408544 - 314 170082703 truB ECDH10B_3340 - tRNA U55 pseudouridine synthase 3041 52.99 0 3408544..3408945 - 133 170082704 rbfA ECDH10B_3341 - 30s ribosome binding factor 3042 53.42 0 3409109..3411781 - 890 170082705 infB ECDH10B_3342 - fused protein chain initiation factor 2, IF2: membrane protein; protein 3043 52.76 0 3411806..3413293 - 495 170082706 nusA ECDH10B_3343 - transcription termination/antitermination L factor 3044 48.57 0 3413321..3413773 - 150 170082707 yhbC ECDH10B_3344 - hypothetical protein 3045 52.60 0 3414404..3415747 + 447 170082708 argG ECDH10B_3346 - argininosuccinate synthetase 3046 43.05 -1 3415755..3417380 - 541 170082709 yhbX ECDH10B_3347 - hydrolase, inner membrane 3047 49.55 0 3417940..3418272 - 110 170082710 secG ECDH10B_3349 - preprotein translocase membrane subunit 3048 54.41 0 3418500..3419837 - 445 170082711 glmM ECDH10B_3350 - phosphoglucosamine mutase 3049 51.59 0 3419830..3420678 - 282 170082712 folP ECDH10B_3351 - 7,8-dihydropteroate synthase 3050 53.59 0 3420768..3422702 - 644 170082713 ftsH ECDH10B_3352 - subunit of integral membrane ATP-dependent zinc metallopeptidase 3051 50.48 0 3422802..3423431 - 209 170082714 rrmJ ECDH10B_3353 - 23S rRNA methyltransferase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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