version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2477 51.81 0 2749817..2751478 + 553 49176247 recN b2616 - recombination and repair protein 2478 49.42 0 2751627..2751968 + 113 90111468 smpA b2617 - small membrane lipoprotein 2479 50.86 0 2752030..2752320 - 96 90111469 yfjF b2618 - predicted protein 2480 47.17 0 2752310..2752786 - 158 16130538 yfjG b2619 - conserved protein 2481 51.76 0 2752918..2753400 + 160 16130539 smpB b2620 - trans-translation protein 2482 47.58 0 2754181..2755422 + 413 16130540 intA b2622 - CP4-57 prophage; integrase 2483 36.78 -2 2755666..2756622 - 318 16130541 yfjH b2623 - CP4-57 prophage; predicted protein 2484 46.95 0 2756666..2756878 + 70 16130542 alpA b2624 - CP4-57 prophage; DNA-binding transcriptional activator 2485 37.94 -2 2757007..2758416 + 469 16130543 yfjI b2625 - CP4-57 prophage; predicted protein 2486 40.35 -2 2758569..2759195 + 208 16130544 yfjJ b2626 - CP4-57 prophage; predicted protein 2487 48.90 0 2759373..2761562 - 729 16130545 yfjK b2627 - CP4-57 prophage; conserved protein 2488 48.67 0 2761559..2763175 - 538 16130546 yfjL b2628 - CP4-57 prophage; predicted protein 2489 45.45 -1 2763535..2763798 - 87 16130547 yfjM b2629 - CP4-57 prophage; predicted protein 2490 44.32 -1 2763940..2765013 + 357 16130548 rnlA b2630 - CP4-57 prophage; RNase LS 2491 45.97 -1 2765006..2765377 + 123 90111470 yfjO b2631 - CP4-57 prophage; predicted protein 2492 54.05 0 2765732..2766595 + 287 49176249 yfjP b2632 - CP4-57 prophage; predicted GTP-binding protein 2493 55.60 0 2766687..2767508 + 273 16130551 yfjQ b2633 - CP4-57 prophage; predicted protein 2494 57.26 +1 2767725..2768426 + 233 16130552 yfjR b2634 - CP4-57 prophage; predicted DNA-binding transcriptional regulator 2495 53.16 0 2768467..2768703 + 78 90111471 ypjK b2635 - CP4-57 prophage; predicted inner membrane protein 2496 50.90 0 2768703..2769146 + 147 90111472 yfjS b2636 - CP4-57 prophage; predicted protein 2497 51.28 0 2769170..2769637 + 155 16130554 yfjT b2637 - CP4-57 prophage; predicted protein 2498 31.22 -2 2771340..2773043 + 567 16130557 yfjW b2642 - CP4-57 prophage; predicted inner membrane protein 2499 54.03 0 2773941..2774399 + 152 16130558 yfjX b2643 - CP4-57 prophage; predicted antirestriction protein 2500 54.24 0 2774408..2774890 + 160 16130559 yfjY b2644 - CP4-57 prophage; predicted DNA repair protein 2501 54.73 0 2774899..2775099 + 66 94541123 ypjJ b4548 - predicted protein 2502 54.40 0 2775137..2775454 + 105 16130560 yfjZ b2645 - CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system 2503 47.58 0 2775475..2775804 + 109 16130561 ypjF b2646 - CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system 2504 49.20 0 2776168..2780748 - 1526 90111474 ypjA b2647 - adhesin-like autotransporter 2505 54.29 0 2787007..2787984 + 325 90111476 csiD b2659 - predicted protein 2506 57.68 +1 2788004..2789272 + 422 90111477 ygaF b2660 - predicted enzyme 2507 58.32 +1 2789295..2790743 + 482 16130575 gabD b2661 - succinate-semialdehyde dehydrogenase I, NADP-dependent 2508 59.33 +1 2790757..2792037 + 426 16130576 gabT b2662 - 4-aminobutyrate aminotransferase, PLP-dependent 2509 51.32 0 2792275..2793675 + 466 16130577 gabP b2663 - gamma-aminobutyrate transporter 2510 53.54 0 2793696..2794358 + 220 90111478 csiR b2664 - DNA-binding transcriptional dual regulator 2511 48.44 0 2794359..2794808 - 149 16130579 ygaU b2665 - predicted protein 2512 50.94 0 2794892..2795050 - 52 16130580 yqaE b2666 - predicted membrane protein 2513 53.00 0 2795233..2795532 + 99 16130581 ygaV b2667 - predicted DNA-binding transcriptional regulator 2514 45.90 -1 2795542..2796066 + 174 16130582 ygaP b2668 - predicted inner membrane protein with hydrolase activity 2515 48.15 0 2796113..2796517 - 134 16130583 stpA b2669 - DNA binding protein, nucleoid-associated 2516 49.11 0 2797186..2797635 + 149 16130584 ygaW b2670 - predicted inner membrane protein 2517 46.96 0 2797672..2798016 - 114 16130585 ygaC b2671 - predicted protein 2518 53.80 0 2798156..2798497 + 113 49176257 ygaM b2672 - predicted protein 2519 53.25 0 2798745..2798990 + 81 16130587 nrdH b2673 - glutaredoxin-like protein 2520 55.96 +1 2798987..2799397 + 136 16130588 nrdI b2674 - protein that stimulates ribonucleotide reduction 2521 51.84 0 2799370..2801514 + 714 16130589 nrdE b2675 - ribonucleoside-diphosphate reductase 2, alpha subunit 2522 48.23 0 2801524..2802483 + 319 16130590 nrdF b2676 - ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein 2523 49.04 0 2802837..2804039 + 400 16130591 proV b2677 - glycine betaine transporter subunit 2524 58.12 +1 2804032..2805096 + 354 16130592 proW b2678 - glycine betaine transporter subunit 2525 52.57 0 2805154..2806146 + 330 16130593 proX b2679 - glycine betaine transporter subunit 2526 52.85 0 2807639..2808376 + 245 16130594 ygaZ b2682 - predicted transporter 2527 54.46 0 2808366..2808701 + 111 16130595 ygaH b2683 - predicted inner membrane protein 2528 49.15 0 2808792..2809322 + 176 16130596 mprA b2684 - DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux 2529 53.37 0 2809449..2810621 + 390 16130597 emrA b2685 - multidrug efflux system 2530 56.60 +1 2810638..2812176 + 512 16130598 emrB b2686 - multidrug efflux system protein 2531 51.55 0 2812240..2812755 - 171 16130599 luxS b2687 - S-ribosylhomocysteinase 2532 51.32 0 2812905..2814461 - 518 16130600 gshA b2688 - gamma-glutamate-cysteine ligase 2533 49.42 0 2814534..2814962 - 142 16130601 yqaA b2689 - conserved inner membrane protein 2534 53.44 0 2814959..2815525 - 188 16130602 yqaB b2690 - predicted hydrolase 2535 49.46 0 2816983..2817168 - 61 16130603 csrA b2696 - pleiotropic regulatory protein for carbon source metabolism 2536 53.63 0 2817403..2820033 - 876 16130604 alaS b2697 - alanyl-tRNA synthetase 2537 51.90 0 2820161..2820661 - 166 16130605 recX b2698 - regulatory protein for RecA 2538 54.14 0 2820730..2821791 - 353 16130606 recA b2699 - DNA strand exchange and recombination protein with protease and nuclease activity 2539 56.63 +1 2821871..2822368 - 165 16130607 ygaD b2700 - conserved protein 2540 55.16 0 2822513..2823598 - 361 16130608 mltB b2701 - membrane-bound lytic murein transglycosylase B 2541 50.18 0 2823854..2824417 + 187 49176260 srlA b2702 - glucitol/sorbitol-specific enzyme IIC component of PTS 2542 54.69 0 2824414..2825373 + 319 49176261 srlE b2703 - glucitol/sorbitol-specific enzyme IIB component of PTS 2543 55.11 0 2825384..2825755 + 123 16130611 srlB b2704 - glucitol/sorbitol-specific enzyme IIA component of PTS 2544 53.33 0 2825759..2826538 + 259 16130612 srlD b2705 - sorbitol-6-phosphate dehydrogenase 2545 55.00 0 2826643..2827002 + 119 16130613 gutM b2706 - DNA-binding transcriptional activator of glucitol operon 2546 48.84 0 2827069..2827842 + 257 16130614 srlR b2707 - DNA-bindng transcriptional repressor 2547 57.35 +1 2827835..2828800 + 321 90111480 gutQ b2708 - predicted phosphosugar-binding protein 2548 56.83 +1 2828797..2830311 - 504 90111481 norR b2709 - DNA-binding transcriptional activator 2549 53.33 0 2830498..2831937 + 479 16130617 norV b2710 - flavorubredoxin oxidoreductase 2550 54.06 0 2831934..2833067 + 377 16130618 norW b2711 - NADH:flavorubredoxin oxidoreductase 2551 57.61 +1 2833195..2835447 - 750 16130619 hypF b2712 - carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases 2552 52.27 0 2835600..2836127 - 175 16130620 hydN b2713 - formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit 2553 53.16 0 2836276..2837289 - 337 16130621 ascG b2714 - DNA-binding transcriptional repressor 2554 56.10 +1 2837546..2839003 + 485 49176263 ascF b2715 - fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component 2555 51.51 0 2839012..2840436 + 474 16130623 ascB b2716 - cryptic 6-phospho-beta-glucosidase 2556 53.93 0 2840595..2841065 - 156 16130624 hycI b2717 - protease involved in processing C-terminal end of HycE 2557 52.80 0 2841058..2841468 - 136 16130625 hycH b2718 - protein required for maturation of hydrogenase 3 2558 56.38 +1 2841465..2842232 - 255 16130626 hycG b2719 - hydrogenase 3 and formate hydrogenase complex, HycG subunit 2559 55.62 0 2842232..2842774 - 180 16130627 hycF b2720 - formate hydrogenlyase complex iron-sulfur protein 2560 56.90 +1 2842784..2844493 - 569 16130628 hycE b2721 - hydrogenase 3, large subunit 2561 58.44 +1 2844511..2845434 - 307 16130629 hycD b2722 - hydrogenase 3, membrane subunit 2562 58.18 +1 2845437..2847263 - 608 16130630 hycC b2723 - hydrogenase 3, membrane subunit 2563 57.35 +1 2847260..2847871 - 203 16130631 hycB b2724 - hydrogenase 3, Fe-S subunit 2564 50.22 0 2847996..2848457 - 153 16130632 hycA b2725 - regulator of the transcriptional regulator FhlA 2565 52.99 0 2848669..2849019 + 116 16130633 hypA b2726 - protein involved in nickel insertion into hydrogenases 3 2566 55.21 0 2849023..2849895 + 290 16130634 hypB b2727 - GTP hydrolase involved in nickel liganding into hydrogenases 2567 55.31 0 2849886..2850158 + 90 16130635 hypC b2728 - protein required for maturation of hydrogenases 1 and 3 2568 55.44 0 2850158..2851279 + 373 16130636 hypD b2729 - protein required for maturation of hydrogenases 2569 57.07 +1 2851318..2852286 + 322 16130637 hypE b2730 - carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein 2570 52.57 0 2852360..2854438 + 692 16130638 fhlA b2731 - DNA-binding transcriptional activator 2571 50.56 0 2854475..2854828 - 117 16130639 ygbA b2732 - predicted protein 2572 56.13 +1 2855115..2857676 + 853 16130640 mutS b2733 - methyl-directed mismatch repair protein 2573 42.31 -1 2857782..2858438 + 218 16130641 pphB b2734 - serine/threonine-specific protein phosphatase 2 2574 51.38 0 2858489..2859286 - 265 16130642 ygbI b2735 - predicted DNA-binding transcriptional regulator 2575 53.03 0 2859452..2860360 + 302 16130643 ygbJ b2736 - predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain 2576 55.10 0 2860357..2861523 + 388 16130644 ygbK b2737 - conserved protein 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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