IslandPath Analysis: Enterococcus faecalis V583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 37.28   STD DEV: 4.35
Enterococcus faecalis V583, complete genome - 1..3218031
3113 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2545	 36.81	0	2640144..2640689	-	181	29377206	nusG	EF2729	-	transcription antitermination protein NusG
2546	 32.75	-1	2640814..2640984	-	56	29377207	secE	EF2730	-	preprotein translocase, SecE subunit
2547	 36.60	0	2641005..2641157	-	50	29377208	rpmG-2	EF2731	-	ribosomal protein L33
2548	 33.49	0	2641443..2642081	+	212	29377209	-	EF2732	-	CBS domain-containing protein
2549	 40.09	0	2642156..2643058	-	300	29377210	murB	EF2733	-	UDP-N-acetylenolpyruvoylglucosamine reductase
2550	 38.91	0	2643130..2644044	-	304	29377211	-	EF2734	-	Gfo/Idh/MocA family oxidoreductase
2551	 37.43	0	2644251..2645006	+	251	29377212	exoA	EF2735	-	exodeoxyribonuclease
2552	 35.39	0	2645041..2645574	+	177	29377213	-	EF2736	-	exonuclease
2553	 40.88	0	2646386..2648068	-	560	29377214	-	EF2738	-	thioredoxin reductase/glutathione-related protein
2554	 36.88	0	2648165..2648728	-	187	29377215	ahpC	EF2739	-	alkyl hydroperoxide reductase, C subunit
2555	 38.41	0	2648969..2649658	-	229	29377216	-	EF2740	-	O-methyltransferase family protein
2556	 36.12	0	2650274..2651278	-	334	29377217	lplA-2	EF2741	-	lipoate-protein ligase A
2557	 39.81	0	2651311..2652051	-	246	29377218	-	EF2742	-	hypothetical protein
2558	 35.10	0	2652197..2652988	-	263	29377219	-	EF2743	-	hypothetical protein
2559	 40.49	0	2653009..2654070	-	353	29377220	-	EF2744	-	M42 family peptidase
2560	 38.04	0	2654305..2655579	-	424	29377221	dltD	EF2746	-	dltD protein
2561	 33.33	0	2655579..2655815	-	78	29377222	dltC	EF2747	-	D-alanine--poly(phosphoribitol) ligase subunit 2
2562	 36.82	0	2655848..2657050	-	400	29377223	dtlB	EF2748	-	basic membrane protein DtlB
2563	 40.11	0	2657050..2658570	-	506	29377224	-	EF2749	-	D-alanine--D-alanyl carrier protein ligase
2564	 25.33	-2	2658585..2658734	-	49	29377225	-	EF2750	-	hypothetical protein
2565	 34.76	0	2658938..2661034	-	698	29377226	-	EF2751	-	permease protein, putative
2566	 37.89	0	2661024..2661791	-	255	29377227	-	EF2752	-	ABC transporter, ATP-binding protein
2567	 38.51	0	2662197..2664380	+	727	29377228	nrdD	EF2754	-	anaerobic ribonucleoside triphosphate reductase
2568	 38.36	0	2664413..2665009	+	198	29377229	nrdG	EF2755	-	anaerobic ribonucleoside-triphosphate reductase activating protein
2569	 39.05	0	2665054..2666172	-	372	29377230	dinP	EF2756	-	DNA-damage-inducible protein P
2570	 35.84	0	2666298..2667056	-	252	29377231	-	EF2757	-	hypothetical protein
2571	 38.16	0	2667040..2667702	-	220	29377232	-	EF2758	-	ABC transporter, ATP-binding protein
2572	 38.83	0	2667717..2668589	-	290	29377233	-	EF2759	-	tetrapyrrole methylase family protein
2573	 36.21	0	2668701..2669048	-	115	29377234	-	EF2760	-	hypothetical protein
2574	 37.62	0	2669041..2669880	-	279	29377235	-	EF2761	-	hypothetical protein
2575	 36.59	0	2669997..2670947	-	316	29377236	holB	EF2762	-	DNA polymerase III subunit delta'
2576	 36.36	0	2670949..2671278	-	109	29377237	-	EF2763	-	hypothetical protein
2577	 39.75	0	2671298..2671936	-	212	29377238	tmk	EF2764	-	thymidylate kinase
2578	 36.75	0	2672017..2672133	-	38	29377239	-	EF2765	-	hypothetical protein
2579	 39.36	0	2672145..2672741	-	198	29377240	recR	EF2766	-	recombination protein RecR
2580	 41.78	+1	2672917..2673579	-	220	29377241	-	EF2767	-	transcriptional regulator
2581	 38.23	0	2673591..2674244	-	217	29377242	-	EF2768	-	hypothetical protein
2582	 39.44	0	2674235..2675593	-	452	29377243	-	EF2769	-	ABC transporter, ATP-binding protein
2583	 40.78	0	2675590..2676153	-	187	29377244	-	EF2770	-	hypothetical protein
2584	 36.64	0	2676527..2677312	+	261	29377245	-	EF2771	-	hypothetical protein
2585	 38.71	0	2678889..2680079	-	396	29377246	-	EF2773	-	major facilitator family transporter
2586	 40.62	0	2680224..2680580	+	118	29377247	-	EF2774	-	hypothetical protein
2587	 42.60	+1	2680673..2681503	-	276	29377248	thiD	EF2775	-	phosphomethylpyrimidine kinase
2588	 44.65	+1	2681500..2682135	-	211	29377249	thiE	EF2776	-	thiamine-phosphate pyrophosphorylase
2589	 43.96	+1	2682132..2682950	-	272	29377250	-	EF2777	-	hydroxyethylthiazole kinase, putative
2590	 40.68	0	2682934..2683464	-	176	29377251	-	EF2778	-	hypothetical protein
2591	 38.73	0	2683799..2684113	-	104	29377252	-	EF2780	-	hypothetical protein
2592	 41.34	0	2684134..2685894	-	586	29377253	dnaX	EF2781	-	DNA polymerase III, gamma and tau subunits
2593	 42.39	+1	2685966..2687180	-	404	29377254	-	EF2782	-	galactose-1-phosphate uridylyltransferase
2594	 40.89	0	2687197..2688189	-	330	29377255	galE-2	EF2783	-	UDP-glucose 4-epimerase
2595	 35.71	0	2688457..2688624	+	55	29377256	-	EF2784	-	hypothetical protein
2596	 41.38	0	2688787..2690625	-	612	29377257	-	EF2785	-	hypothetical protein
2597	 40.17	0	2690639..2690989	-	116	29377258	-	EF2786	-	hypothetical protein
2598	 35.34	0	2691111..2691509	-	132	29377259	-	EF2787	-	rhodanese family protein
2599	 41.46	0	2691525..2692496	-	323	29377260	glcK	EF2788	-	glucokinase
2600	 34.70	0	2692497..2692715	-	72	29377261	-	EF2789	-	hypothetical protein
2601	 37.13	0	2692733..2693443	-	236	29377262	-	EF2790	-	small hydrophobic molecule transporter protein, putative
2602	 41.80	+1	2693454..2693996	-	180	29377263	-	EF2791	-	5-formyltetrahydrofolate cyclo-ligase family protein
2603	 38.26	0	2694084..2694854	-	256	29377264	-	EF2792	-	hypothetical protein
2604	 36.63	0	2695020..2695595	+	191	29377265	-	EF2793	-	hypothetical protein
2605	 34.36	0	2695701..2697251	+	516	29377266	-	EF2794	-	hypothetical protein
2606	 33.80	0	2697272..2698336	+	354	29377267	-	EF2795	-	LysM domain-containing protein
2607	 33.90	0	2698595..2699659	-	354	29377268	-	EF2796	-	hypothetical protein
2608	 30.81	-1	2699915..2700112	-	65	29377269	-	EF2797	-	hypothetical protein
2609	 30.37	-1	2700666..2701070	-	134	29377270	-	EF2798	-	hypothetical protein
2610	 35.03	0	2701329..2702507	-	392	29377271	-	EF2800	-	ISEf1, transposase
2611	 28.16	-2	2702591..2703382	-	263	29377272	-	EF2801	-	hypothetical protein
2612	 38.63	0	2703543..2704844	-	433	29377273	-	EF2802	-	endolysin
2613	 38.16	0	2704847..2705053	-	68	29377274	-	EF2803	-	holin
2614	 38.03	0	2705056..2705289	-	77	29377275	-	EF2804	-	hypothetical protein
2615	 35.51	0	2705324..2705461	-	45	29377276	-	EF2805	-	hypothetical protein
2616	 31.47	-1	2705461..2705835	-	124	29377277	-	EF2806	-	hypothetical protein
2617	 36.59	0	2705850..2706401	-	183	29377278	-	EF2807	-	hypothetical protein
2618	 36.19	0	2707021..2707929	-	302	29377279	-	EF2810	-	hypothetical protein
2619	 38.05	0	2707948..2710743	-	931	29377280	-	EF2811	-	minor structural protein
2620	 32.20	-1	2710740..2711444	-	234	29377281	-	EF2812	-	hypothetical protein
2621	 36.98	0	2711450..2713753	-	767	29377282	-	EF2813	-	tail tape meausure protein
2622	 33.55	0	2713945..2714400	-	151	29377283	-	EF2814	-	hypothetical protein
2623	 36.59	0	2714400..2715044	-	214	29377284	-	EF2815	-	phi13 family major tail protein
2624	 30.58	-1	2715041..2715403	-	120	29377285	-	EF2816	-	hypothetical protein
2625	 34.22	0	2715393..2715731	-	112	29377286	-	EF2817	-	hypothetical protein
2626	 36.70	0	2715721..2716047	-	108	29377287	-	EF2818	-	minor structural protein, putative
2627	 35.11	0	2716025..2716306	-	93	29377288	-	EF2819	-	hypothetical protein
2628	 35.68	0	2716308..2717672	-	454	29377289	-	EF2820	-	major capsid protein
2629	 37.00	0	2717685..2718257	-	190	29377290	-	EF2821	-	prohead protease
2630	 33.74	0	2718229..2719455	-	408	29377291	-	EF2822	-	portal protein
2631	 35.24	0	2719474..2721201	-	575	29377292	-	EF2823	-	terminase, large subunit, putative
2632	 36.87	0	2721198..2721650	-	150	29377293	-	EF2824	-	hypothetical protein
2633	 36.27	0	2721761..2722135	-	124	29377294	-	EF2825	-	hypothetical protein
2634	 34.56	0	2722135..2722542	-	135	29377295	-	EF2826	-	hypothetical protein
2635	 41.03	0	2723070..2723537	-	155	29377296	-	EF2828	-	ArpU family transcriptional regulator
2636	 34.62	0	2723745..2723978	-	77	29377297	-	EF2829	-	hypothetical protein
2637	 32.79	-1	2724161..2724343	-	60	29377298	-	EF2830	-	hypothetical protein
2638	 35.00	0	2724464..2724583	-	39	29377299	-	EF2831	-	hypothetical protein
2639	 36.36	0	2724686..2724784	-	32	29377300	-	EF2832	-	hypothetical protein
2640	 28.69	-1	2724836..2725654	+	272	29377301	-	EF2833	-	hypothetical protein
2641	 34.78	0	2725812..2726018	-	68	29377302	-	EF2834	-	hypothetical protein
2642	 36.82	0	2726037..2726639	-	200	29377303	-	EF2835	-	hypothetical protein
2643	 37.37	0	2726659..2727129	-	156	29377304	-	EF2836	-	hypothetical protein
2644	 38.89	0	2727278..2727547	-	89	29377305	-	EF2837	-	hypothetical protein
37.28	MEAN

4.35	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.