version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 562 40.13 0 672736..674001 - 421 78188546 - Cag_0568 - rod shape-determining protein RodA 563 45.53 0 674186..675103 + 305 78188547 era Cag_0569 - GTP-binding protein Era 564 42.27 0 675279..677057 - 592 78188548 rpsA Cag_0570 - 30S ribosomal protein S1 565 49.74 +1 677141..677719 - 192 78188549 - Cag_0571 - cytidylate kinase 566 45.05 0 678292..679383 + 363 78188550 - Cag_0572 - translation-associated GTPase 567 49.88 +1 679418..680221 + 267 78188551 - Cag_0573 - glutamate racemase 568 35.45 -1 680480..680668 + 62 78188552 - Cag_0574 - hypothetical protein 569 34.29 -1 680653..680967 + 104 78188553 - Cag_0575 - hypothetical protein 570 37.39 -1 681076..681297 + 73 78188554 - Cag_0576 - hypothetical protein 571 36.00 -1 681346..682284 + 312 78188555 - Cag_0577 - hypothetical protein 572 42.38 0 682281..683330 + 349 78188556 - Cag_0578 - hypothetical protein 573 46.10 0 683327..684313 + 328 78188557 ispH Cag_0579 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 574 52.19 +1 684372..686333 + 653 78188558 - Cag_0580 - putative NADPH-dependent glutamate synthase small subunit 575 46.89 0 686358..686630 + 90 78188559 - Cag_0581 - hypothetical protein 576 41.23 0 687080..687484 + 134 78188560 - Cag_0582 - hypothetical protein 577 39.66 0 687628..687864 + 78 78188561 - Cag_0583 - hypothetical protein 578 41.30 0 688130..688405 + 91 78188562 - Cag_0584 - hypothetical protein 579 36.88 -1 688405..688686 + 93 78188563 - Cag_0585 - hypothetical protein 580 46.91 0 688745..689311 + 188 78188564 - Cag_0586 - hypothetical protein 581 38.53 -1 689476..690072 - 198 78188565 - Cag_0587 - hypothetical protein 582 36.93 -1 690066..691259 - 397 78188566 - Cag_0588 - hypothetical protein 583 47.98 0 691317..692852 - 511 78188567 guaA Cag_0589 - bifunctional GMP synthase/glutamine amidotransferase protein 584 47.88 0 692934..695222 - 762 78188568 - Cag_0590 - penicillin-binding protein 1A 585 44.75 0 695270..696145 - 291 78188569 - Cag_0591 - proline iminopeptidase, putative 586 40.61 0 696372..697031 + 219 78188570 - Cag_0592 - DedA family protein 587 31.39 -2 697153..697563 + 136 78188571 - Cag_0593 - nucleotidyltransferase substrate-binding protein 588 30.42 -2 697560..697868 + 102 78188572 - Cag_0594 - hypothetical protein 589 44.88 0 697937..698707 - 256 78188573 - Cag_0595 - hypothetical protein 590 49.04 0 698937..699458 - 173 78188574 - Cag_0596 - acetyltransferase 591 40.29 0 699769..701004 + 411 78188575 - Cag_0597 - transposase 592 30.94 -2 701288..702289 - 333 78188576 - Cag_0598 - hypothetical protein 593 31.41 -2 702757..703590 - 277 78188577 - Cag_0599 - hypothetical protein 594 35.37 -1 703887..704180 - 97 78188578 - Cag_0600 - hypothetical protein 595 36.82 -1 704592..704849 - 85 78188579 - Cag_0601 - hypothetical protein 596 47.80 0 704964..705965 - 333 78188580 - Cag_0602 - fructose-1,6-bisphosphatase 597 49.15 0 706047..707753 + 568 78188581 - Cag_0603 - RecJ exonuclease 598 39.75 0 707865..708752 - 295 78188582 - Cag_0604 - hypothetical protein 599 40.73 0 708736..709668 - 310 78188583 - Cag_0605 - glycosyl transferase 600 43.20 0 709687..711237 - 516 78188584 - Cag_0606 - hypothetical protein 601 41.48 0 711209..711748 - 179 78188585 - Cag_0607 - phosphoesterase, PA-phosphatase related 602 45.78 0 711931..712155 - 74 78188586 - Cag_0608 - hypothetical protein 603 40.89 0 712253..712477 + 74 78188587 - Cag_0609 - hypothetical protein 604 41.67 0 712553..713212 - 219 78188588 - Cag_0610 - hypothetical protein 605 46.72 0 713435..713845 + 136 78188589 - Cag_0611 - putative anti-sigma regulatory factor (serine/threonine protein kinase) 606 48.45 0 713865..715511 + 548 78188590 - Cag_0612 - glucose-6-phosphate isomerase 607 44.63 0 716235..716969 + 244 78188591 - Cag_0613 - SapC-related protein 608 47.72 0 717094..827511 + 36805 78188592 - Cag_0614 - parallel beta-helix repeat-containing protein 609 48.79 0 827589..829322 + 577 78188593 - Cag_0615 - Outer membrane protein-like 610 46.30 0 829510..891450 + 20646 78188594 - Cag_0616 - parallel beta-helix repeat-containing protein 611 38.42 -1 891714..892106 - 130 78188595 - Cag_0617 - hypothetical protein 612 46.22 0 892192..893184 - 330 78188596 - Cag_0618 - formate-dependent nitrite reductase membrane component-like 613 50.09 +1 893187..893729 - 180 78188597 - Cag_0619 - NrfC protein 614 48.88 0 893750..895975 - 741 78188598 - Cag_0620 - twin-arginine translocation pathway signal 615 45.59 0 896297..896704 - 135 78188599 - Cag_0621 - cytosolic long-chain acyl-CoA thioester hydrolase family protein 616 46.55 0 896940..897461 + 173 78188600 - Cag_0622 - deoxycytidylate deaminase, putative 617 49.59 +1 897461..898561 + 366 78188601 - Cag_0623 - riboflavin biosynthesis protein RibD 618 42.60 0 898616..899122 + 168 78188602 - Cag_0624 - thiol peroxidase 619 48.94 0 899122..899781 + 219 78188603 - Cag_0625 - riboflavin synthase subunit alpha 620 48.83 0 899851..901212 + 453 78188604 - Cag_0626 - recombination factor protein RarA 621 48.83 0 901229..902641 + 470 78188605 - Cag_0627 - outer membrane efflux protein, putative 622 46.96 0 902652..903590 - 312 78188606 - Cag_0628 - hypothetical protein 623 43.27 0 903654..904136 - 160 78188607 - Cag_0629 - Hit family protein 624 43.10 0 904565..905158 + 197 78188608 - Cag_0630 - hypothetical protein 625 46.19 0 905140..906189 + 349 78188609 - Cag_0631 - ferrochelatase, putative 626 45.73 0 906205..906801 + 198 78188610 - Cag_0632 - TPR repeat-containing protein 627 44.18 0 906798..907046 + 82 78188611 - Cag_0633 - hypothetical protein 628 39.23 0 907186..907626 + 146 78188612 - Cag_0634 - NADH dehydrogenase I, subunit 3 629 43.11 0 907643..908215 + 190 78188613 - Cag_0635 - NADH dehydrogenase (ubiquinone), 20 kDa subunit 630 41.43 0 908241..908759 + 172 78188614 - Cag_0636 - NADH (or F420H2) dehydrogenase, subunit C 631 41.56 0 908789..909991 + 400 78188615 - Cag_0637 - NADH dehydrogenase I, 49 kDa subunit 632 40.13 0 909988..911106 + 372 78188616 - Cag_0638 - NADH dehydrogenase I chain H 633 38.81 -1 911155..911757 + 200 78188617 - Cag_0639 - NADH dehydrogenase I, 23 kDa subunit 634 35.85 -1 911762..912277 + 171 78188618 - Cag_0640 - NADH dehydrogenase I subunit 6 635 35.51 -1 912292..912612 + 106 78188619 - Cag_0641 - NADH dehydrogenase I subunit 4L 636 41.59 0 912666..914978 + 770 78188620 - Cag_0642 - NADH-plastoquinone oxidoreductase, chain 5 637 40.61 0 915019..916653 + 544 78188621 - Cag_0643 - proton-translocating NADH-quinone oxidoreductase, chain M 638 38.72 -1 916695..918236 + 513 78188622 - Cag_0644 - proton-translocating NADH-quinone oxidoreductase, chain N 639 41.73 0 918428..919213 + 261 78188623 - Cag_0645 - hypothetical protein 640 43.67 0 919226..919699 + 157 78188624 - Cag_0646 - hypothetical protein 641 37.06 -1 919985..921058 + 357 78188625 - Cag_0647 - glycosyl transferase family protein 642 38.99 0 921085..921897 + 270 78188626 - Cag_0648 - polysaccharide export periplasmic protein 643 36.76 -1 921961..924381 + 806 78188627 - Cag_0649 - hypothetical protein 644 36.81 -1 924397..925116 + 239 78188628 - Cag_0650 - exopolysaccharide biosynthesis protein 645 41.77 0 925165..926136 + 323 78188629 - Cag_0651 - GDP-L-fucose synthetase 646 43.97 0 926145..927347 + 400 78188630 - Cag_0652 - GDP-mannose 4,6-dehydratase 647 30.12 -2 928258..928599 + 113 78188631 - Cag_0653 - transcriptional modulator of MazE/toxin, MazF 648 37.00 -1 929060..929359 + 99 78188632 - Cag_0654 - hypothetical protein 649 31.25 -2 929436..929675 + 79 78188633 - Cag_0655 - hypothetical protein 650 28.08 -2 929659..930039 + 126 78188634 - Cag_0656 - nucleic acid binding protein 651 33.85 -1 930370..931527 + 385 78188635 - Cag_0657 - putative transcriptional regulator 652 41.02 0 931743..932978 - 411 78188636 - Cag_0658 - transposase 653 38.46 -1 933468..933740 + 90 78188637 - Cag_0659 - hypothetical protein 654 37.69 -1 933737..934126 + 129 78188638 - Cag_0660 - hypothetical protein 655 37.31 -1 934166..934366 + 66 78188639 - Cag_0661 - hypothetical protein 656 41.24 0 934842..935195 + 117 78188640 - Cag_0662 - hypothetical protein 657 29.21 -2 935574..935888 + 104 78188641 - Cag_0663 - hypothetical protein 658 34.89 -1 936305..937204 + 299 78188642 - Cag_0664 - putative transcriptional regulator 659 34.35 -1 937448..938728 + 426 78188643 - Cag_0665 - polysaccharide biosynthesis protein 660 27.49 -2 938721..939422 + 233 78188644 - Cag_0666 - hypothetical protein 661 28.60 -2 939419..941173 + 584 78188645 - Cag_0667 - hypothetical protein 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.