version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 372 61.54 +1 468026..471109 - 1027 192360050 - CJA_0372 - RND transporter, Hydrophobe/Amphiphile Efflux family 373 56.06 0 471125..472321 - 398 192360553 - CJA_0373 - HlyD family secretion protein 374 55.40 0 472760..474295 + 511 192358845 cel45A CJA_0374 - cellulase, putative, cel45A 375 50.00 0 474559..475122 + 187 192362524 ahpC CJA_0375 - AhpC 376 52.48 0 475220..476770 + 516 192360995 ahpF CJA_0376 - AhpF 377 48.30 0 476817..477845 - 342 192359916 - CJA_0377 - beta-1, 4-galactosyltransferase, putative, gt2a 378 50.95 0 478085..478714 - 209 192361974 - CJA_0378 - Alpha/Beta hydrolase family of unknown function (DUF1234) family 379 53.37 0 478871..479479 - 202 192360699 - CJA_0379 - probable homoserine/homoserine lactone efflux protein 380 48.99 0 479611..479955 + 114 192360097 - CJA_0380 - hypothetical protein 381 43.33 -1 479976..480125 - 49 192359226 - CJA_0381 - hypothetical protein 382 51.52 0 480200..480331 + 43 192359158 - CJA_0382 - hypothetical protein 383 55.56 0 480370..480837 + 155 192361177 - CJA_0383 - putative lipoprotein 384 53.75 0 480900..482099 - 399 192360838 pel10C CJA_0384 - pectate lyase, putative, pel10C 385 56.11 0 482279..483121 - 280 192359955 panB CJA_0385 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 386 53.36 0 483147..483830 - 227 192360781 - CJA_0386 - predicted deoxypurine kinase 387 56.04 0 483844..484323 - 159 192360174 folK CJA_0387 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 388 58.15 +1 484320..485693 - 457 192359588 pcnB CJA_0388 - polynucleotide adenylyltransferase 389 56.42 0 486530..487924 - 464 192361827 - CJA_0389 - galR two-component system response regulator 390 57.47 0 488039..491008 - 989 192361250 galS CJA_0390 - galS His Kinase A (phosphoacceptor) domain 391 50.82 0 491054..491236 - 60 192360386 - CJA_0391 - hypothetical protein 392 61.77 +1 491267..492205 - 312 192362183 - CJA_0392 - glutamyl- and glutaminyl-tRNA synthetase 393 54.00 0 492247..492783 - 178 192360114 - CJA_0393 - DnaK suppressor protein 394 59.72 +1 493010..493714 + 234 192359224 sfsA CJA_0395 - sugar fermentation stimulation protein 395 59.31 +1 493711..494634 - 307 192361743 - CJA_0394 - Permeases of the drug/metabolite transporter (DMT) superfamily 396 56.24 0 494717..495253 - 178 192362330 - CJA_0396 - putative lipoprotein 397 52.36 0 495470..496294 + 274 192361994 uppP CJA_0397 - undecaprenyl-diphosphatase UppP 398 55.32 0 496406..498520 + 704 192360225 amy13F CJA_0398 - alpha amylase, putative, amy13F 399 44.57 -1 498743..499009 + 88 192361283 - CJA_0399 - hypothetical protein 400 53.33 0 499009..499548 + 179 192361524 - CJA_0400 - cytochrome b561 family protein 401 52.19 0 499581..501404 - 607 192360335 - CJA_0401 - hypothetical protein 402 52.60 0 501653..502036 - 127 192361448 - CJA_0402 - hypothetical protein 403 35.00 -2 502148..502267 + 39 192361690 - CJA_0403 - hypothetical protein 404 55.86 0 502284..503606 - 440 192359011 hslU CJA_0404 - heat shock protein HslVU, ATPase subunit HslU 405 58.10 +1 503656..504180 - 174 192360997 - CJA_0405 - peptidase, T1 family superfamily 406 57.38 0 504270..504818 - 182 192359465 - CJA_0406 - Sporulation related repeat family 407 58.97 +1 504878..507073 - 731 192360263 priA CJA_0407 - primosomal protein N` 408 56.27 0 507207..507485 + 92 192361356 hip CJA_0408 - High potential iron-sulfur protein (HiPIP) 409 51.09 0 507595..507870 + 91 192361414 rpmE CJA_0409 - 50S ribosomal subunit protein L31 410 58.02 +1 507875..508765 + 296 192362505 - CJA_0410 - staphylococcal nuclease homolog 411 54.12 0 508779..511241 - 820 192360194 gt51D CJA_0411 - murein polymerase, putative, gt51D 412 50.56 0 511345..512412 + 355 192359466 pilM CJA_0412 - type IV pilus assembly protein PilM 413 45.52 -1 512412..513002 + 196 192359164 pilN CJA_0413 - type 4 fimbrial biogenesis protein PilN 414 43.73 -1 513002..513655 + 217 192362154 pilO CJA_0414 - pilO 415 41.71 -1 513652..514176 + 174 192360736 pilP CJA_0415 - type IV pilus biogenesis protein PilP 416 43.36 -1 514213..516357 + 714 192359937 - CJA_0416 - fimbrial assembly protein PilQ 417 52.95 0 516358..516882 + 174 192361325 - CJA_0417 - shikimate kinase 418 52.75 0 517026..518117 + 363 192360279 aroB CJA_0418 - 3-dehydroquinate synthase 419 55.92 0 518261..519805 + 514 192359671 - CJA_0419 - hypothetical protein 420 54.71 0 519866..520258 - 130 192362429 gcvH CJA_0420 - glycine cleavage system H protein 421 58.33 +1 520301..521416 - 371 192361648 gcvT CJA_0421 - glycine cleavage system T protein 422 57.89 +1 521536..522105 - 189 192360890 - CJA_0422 - YbcL 423 57.28 0 522133..523155 - 340 192359987 - CJA_0423 - hypothetical protein 424 57.07 0 523152..524558 - 468 192359133 - CJA_0424 - trypsin domain protein 425 62.45 +1 524652..525410 - 252 192361736 - CJA_0425 - competence protein ComF 426 56.95 0 525588..526688 + 366 192360896 bioB CJA_0426 - biotin synthase 427 61.35 +1 526721..527923 + 400 192360066 bioF CJA_0427 - 8-amino-7-oxononanoate synthase 428 59.77 +1 527916..529424 + 502 192359126 bioC CJA_0428 - biotin biosynthesis protein BioC 429 62.45 +1 529444..530130 + 228 192362200 bioD CJA_0429 - dethiobiotin synthase 430 56.94 0 530133..530831 + 232 192361335 - CJA_0430 - putative lipoprotein 431 56.93 0 531004..531270 + 88 192361432 - CJA_0431 - Domain of unknown function (DUF1078) family 432 62.67 +1 531284..532159 + 291 192360201 - CJA_0432 - srpA-related protein 433 51.61 0 532489..533079 + 196 192362188 - CJA_0434 - Uncharacterized BCR, YhbC family 434 52.50 0 533180..534661 + 493 192361293 nusA CJA_0435 - N utilization substance protein A 435 54.85 0 534715..537507 + 930 192360932 infB CJA_0436 - translation initiation factor IF-2 436 53.28 0 537609..538019 + 136 192359933 rbfA CJA_0437 - ribosome-binding factor A 437 58.33 +1 538019..538978 + 319 192361348 truB CJA_0438 - tRNA pseudouridine synthase B 438 51.85 0 539133..539402 + 89 192360136 rpsO CJA_0439 - ribosomal protein S15 439 53.16 0 539639..541771 + 710 192359049 - CJA_0440 - polyribonucleotide nucleotidyltransferase 440 49.20 0 541871..543439 - 522 192361912 - CJA_0441 - hypothetical protein 441 49.77 0 543529..544824 - 431 192361597 - CJA_0442 - AmpG protein, beta-lactamase induction signal transducer 442 51.50 0 545126..545659 - 177 192362399 ppa CJA_0443 - inorganic pyrophosphatase 443 54.67 0 545752..546576 - 274 192359357 - CJA_0444 - FHA domain protein 444 53.68 0 546664..547125 + 153 192360392 - CJA_0445 - Selenoprotein W-related family 445 50.29 0 547268..549862 + 864 192361734 - CJA_0446 - hypothetical protein 446 47.22 0 549917..551068 - 383 192359232 - CJA_0447 - ISCja2, transposase 447 52.70 0 551202..552218 - 338 192359972 - CJA_0448 - hypothetical protein 448 51.30 0 552226..552648 + 140 192360350 - CJA_0449 - hypothetical protein 449 54.22 0 552921..553997 - 358 192361148 axe2C CJA_0450 - xylan esterase, putative, axe2C 450 52.05 0 554068..554676 - 202 192361816 - CJA_0451 - mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 451 53.43 0 554941..555990 - 349 192360566 holA CJA_0452 - DNA polymerase III, delta subunit 452 50.09 0 555996..556532 - 178 192360006 - CJA_0453 - putative rare lipoprotein B precursor 453 54.49 0 556577..559171 - 864 192359451 leuS CJA_0454 - leucyl-tRNA synthetase 454 57.14 0 559325..559660 + 111 192361754 - CJA_0455 - hypothetical protein 455 56.38 0 559837..560769 + 310 192361132 - CJA_0456 - endo-1,4-beta-xylanase B 456 55.68 0 560863..563010 - 715 192360859 aquI CJA_0457 - aqualysin precursor 457 50.00 0 563502..563819 + 105 192361653 rplU CJA_0458 - ribosomal protein L21 458 52.33 0 563834..564091 + 85 192359608 rpmA CJA_0459 - ribosomal protein L27 459 52.72 0 564229..565425 + 398 192360477 - CJA_0460 - GTP1/OBG family 460 52.72 0 565447..566586 + 379 192360112 proB CJA_0461 - glutamate 5-kinase 461 47.12 0 566653..568611 - 652 192360996 - CJA_0462 - hypothetical protein 462 54.31 0 568838..570148 + 436 192360476 - CJA_0463 - putative lipoprotein 463 54.28 0 570173..570826 - 217 192359639 - CJA_0464 - HAD-superfamily subfamily IB hydrolase, TIGR01490 464 53.02 0 571035..571547 + 170 192361133 - CJA_0465 - hydrolase, NUDIX family 465 54.38 0 571587..573857 + 756 192359797 - CJA_0466 - phosphoenolpyruvate-protein phosphotransferase PtsP 466 52.03 0 573924..574784 + 286 192359062 lgt CJA_0467 - prolipoprotein diacylglyceryl transferase 467 49.59 0 574820..575668 + 282 192362015 thyA CJA_0468 - thymidylate synthase 468 52.52 0 575690..576205 + 171 192360867 folA CJA_0469 - dihydrofolate reductase 469 48.25 0 576442..576555 + 37 192361493 - CJA_0470 - hypothetical protein 470 46.05 -1 576563..577270 + 235 192360297 - CJA_0471 - hypothetical protein 471 49.82 0 577267..578649 + 460 192362143 - CJA_0472 - MotA/TolQ/ExbB proton channel family protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0