version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2801 62.02 0 3387855..3389642 - 595 158522818 - Dole_2808 - PAS/PAC sensor signal transduction histidine kinase 2802 55.28 0 3390075..3390557 + 160 158522819 - Dole_2809 - hypothetical protein 2803 54.95 0 3391049..3391432 + 127 158522820 - Dole_2810 - response regulator receiver protein 2804 62.39 0 3391485..3392981 - 498 158522821 - Dole_2811 - multi-sensor signal transduction histidine kinase 2805 59.27 0 3392971..3394458 - 495 158522822 - Dole_2812 - PAS/PAC sensor signal transduction histidine kinase 2806 60.79 0 3394644..3396242 + 532 158522823 - Dole_2813 - D-3-phosphoglycerate dehydrogenase 2807 50.15 -1 3396365..3396691 + 108 158522824 - Dole_2814 - hypothetical protein 2808 59.40 0 3396688..3398145 + 485 158522825 - Dole_2815 - protease Do 2809 58.39 0 3398264..3399121 + 285 158522826 - Dole_2816 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 2810 58.81 0 3399258..3400211 + 317 158522827 - Dole_2817 - ribose-phosphate pyrophosphokinase 2811 57.49 0 3400263..3400916 + 217 158522828 - Dole_2818 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 2812 54.81 0 3400956..3401537 + 193 158522829 - Dole_2819 - aminoacyl-tRNA hydrolase 2813 59.86 0 3401596..3403668 + 690 158522830 - Dole_2820 - membrane-bound proton-translocating pyrophosphatase 2814 52.91 0 3403803..3404369 + 188 158522831 - Dole_2821 - CarD family transcriptional regulator 2815 60.91 0 3404356..3405345 + 329 158522832 - Dole_2822 - RluA family pseudouridine synthase 2816 58.48 0 3405389..3406267 + 292 158522833 - Dole_2823 - short chain dehydrogenase 2817 60.82 0 3406264..3407340 + 358 158522834 - Dole_2824 - hypothetical protein 2818 62.24 0 3407431..3409530 - 699 158522835 - Dole_2825 - electron transport complex, RnfABCDGE type, B subunit 2819 57.47 0 3409567..3410142 - 191 158522836 - Dole_2826 - electron transport complex, RnfABCDGE type, A subunit 2820 57.05 0 3410152..3410754 - 200 158522837 - Dole_2827 - SoxR-reducing system protein RsxE 2821 60.41 0 3410770..3411360 - 196 158522838 - Dole_2828 - electron transport complex, RnfABCDGE type, G subunit 2822 57.11 0 3411360..3412322 - 320 158522839 - Dole_2829 - electron transport complex, RnfABCDGE type, D subunit 2823 60.75 0 3412312..3413595 - 427 158522840 - Dole_2830 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2824 58.38 0 3413659..3414213 - 184 158522841 - Dole_2831 - hypothetical protein 2825 61.35 0 3414425..3415120 - 231 158522842 - Dole_2832 - transcriptional regulatory protein 2826 57.61 0 3415265..3415540 - 91 158522843 - Dole_2833 - hypothetical protein 2827 63.16 +1 3415809..3415979 + 56 158522844 - Dole_2834 - hypothetical protein 2828 54.07 0 3416047..3416697 + 216 158522845 - Dole_2835 - hypothetical protein 2829 58.76 0 3417413..3419170 - 585 158522846 - Dole_2836 - lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 2830 59.15 0 3419170..3420339 - 389 158522847 - Dole_2837 - lipid-A-disaccharide synthase 2831 57.37 0 3420332..3421288 - 318 158522848 - Dole_2838 - oxidoreductase domain-containing protein 2832 61.92 0 3421307..3422128 - 273 158522849 - Dole_2839 - hypothetical protein 2833 58.63 0 3422247..3423017 - 256 158522850 - Dole_2840 - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase 2834 61.37 0 3423034..3423486 - 150 158522851 - Dole_2841 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 2835 60.80 0 3423509..3424531 - 340 158522852 - Dole_2842 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 2836 51.58 0 3424565..3425101 - 178 158522853 - Dole_2843 - outer membrane chaperone Skp (OmpH) 2837 56.05 0 3425190..3427931 - 913 158522854 - Dole_2844 - surface antigen (D15) 2838 60.32 0 3427933..3428673 - 246 158522855 - Dole_2845 - ABC transporter-related protein 2839 56.81 0 3428666..3429892 - 408 158522856 - Dole_2846 - LolC/E family lipoprotein releasing system, transmembrane protein 2840 59.93 0 3429935..3431389 - 484 158522857 - Dole_2847 - lysyl-tRNA synthetase 2841 54.77 0 3431522..3432967 - 481 158522858 - Dole_2848 - histidine kinase 2842 54.54 0 3433011..3434222 - 403 158522859 - Dole_2849 - type II secretion system protein 2843 58.61 0 3434703..3435869 - 388 158522860 - Dole_2850 - S-adenosylmethionine synthetase 2844 59.94 0 3436284..3437621 + 445 158522861 - Dole_2851 - hypothetical protein 2845 59.03 0 3437647..3439230 + 527 158522862 - Dole_2852 - D-3-phosphoglycerate dehydrogenase 2846 60.67 0 3439491..3440291 + 266 158522863 - Dole_2853 - methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 2847 64.34 +1 3440333..3441319 + 328 158522864 - Dole_2854 - ribokinase-like domain-containing protein 2848 60.24 0 3441341..3442009 + 222 158522865 - Dole_2855 - TPR repeat-containing protein 2849 59.56 0 3442041..3443954 - 637 158522866 - Dole_2856 - phospholipid/glycerol acyltransferase 2850 53.48 0 3444203..3444475 - 90 158522867 - Dole_2857 - histone family protein DNA-binding protein 2851 64.39 +1 3444657..3445448 - 263 158522868 - Dole_2858 - metal dependent phosphohydrolase 2852 60.52 0 3445438..3446430 - 330 158522869 - Dole_2859 - molybdenum cofactor biosynthesis protein A 2853 56.85 0 3446440..3447417 - 325 158522870 - Dole_2860 - glycosyl transferase family protein 2854 61.37 0 3447398..3448567 - 389 158522871 - Dole_2861 - hypothetical protein 2855 63.20 +1 3448677..3449369 + 230 158522872 - Dole_2862 - phosphoglycerate mutase 2856 60.46 0 3449425..3449859 + 144 158522873 - Dole_2863 - hypothetical protein 2857 60.59 0 3449874..3450647 + 257 158522874 - Dole_2864 - enoyl-CoA hydratase/isomerase 2858 56.74 0 3451427..3451849 - 140 158522875 - Dole_2865 - hypothetical protein 2859 62.79 +1 3452103..3453083 - 326 158522876 - Dole_2866 - nifR3 family TIM-barrel protein 2860 59.44 0 3453121..3453798 - 225 158522877 - Dole_2867 - hypothetical protein 2861 56.67 0 3453953..3454402 + 149 158522878 - Dole_2868 - CoA-binding domain-containing protein 2862 53.76 0 3454833..3455018 - 61 158522879 - Dole_2869 - hypothetical protein 2863 54.33 0 3455072..3455452 - 126 158522880 - Dole_2870 - desulfoferrodoxin 2864 60.76 0 3455605..3458568 - 987 158522881 - Dole_2871 - peptidase M16C associated domain-containing protein 2865 56.69 0 3458625..3459005 - 126 158522882 - Dole_2872 - hypothetical protein 2866 60.40 0 3459259..3460821 - 520 158522883 - Dole_2873 - radical SAM domain-containing protein 2867 59.79 0 3461139..3461516 + 125 158522884 - Dole_2874 - glyoxalase/bleomycin resistance protein/dioxygenase 2868 60.90 0 3461635..3463281 + 548 158522885 - Dole_2875 - hydroxylamine reductase 2869 54.32 0 3463956..3464360 + 134 158522886 - Dole_2876 - ArsR family transcriptional regulator 2870 61.55 0 3464659..3465831 + 390 158522887 - Dole_2877 - permease 2871 54.27 0 3465867..3466100 + 77 158522888 - Dole_2878 - redox-active disulfide protein 2 2872 58.33 0 3466143..3466346 + 67 158522889 - Dole_2879 - hypothetical protein 2873 56.51 0 3466416..3466937 + 173 158522890 - Dole_2880 - Fe-S cluster domain-containing protein 2874 57.53 0 3466956..3467393 + 145 158522891 - Dole_2881 - protein tyrosine phosphatase 2875 59.61 0 3467409..3468599 + 396 158522892 - Dole_2882 - arsenical-resistance protein 2876 60.89 0 3468663..3469181 + 172 158522893 - Dole_2883 - rhodanese domain-containing protein 2877 65.48 +1 3469171..3470094 + 307 158522894 - Dole_2884 - cation diffusion facilitator family transporter 2878 59.88 0 3470099..3470584 + 161 158522895 - Dole_2885 - DoxX family protein 2879 55.72 0 3470581..3470982 + 133 158522896 - Dole_2886 - thioredoxin domain-containing protein 2880 63.99 +1 3470979..3471689 + 236 158522897 - Dole_2887 - cytochrome c biogenesis protein transmembrane region 2881 46.61 -1 3471784..3472122 - 112 158522898 - Dole_2888 - hypothetical protein 2882 43.17 -2 3472273..3472587 - 104 158522899 - Dole_2889 - XRE family plasmid maintenance system antidote protein 2883 35.84 -2 3472599..3472877 - 92 158522900 - Dole_2890 - plasmid maintenance system killer 2884 63.33 +1 3473501..3474400 - 299 158522901 - Dole_2891 - hypothetical protein 2885 58.04 0 3474572..3475255 + 227 158522902 - Dole_2892 - TetR family transcriptional regulator 2886 59.58 0 3475243..3476061 + 272 158522903 - Dole_2893 - hypothetical protein 2887 62.73 +1 3476132..3477325 + 397 158522904 - Dole_2894 - RND family efflux transporter MFP subunit 2888 61.57 0 3477338..3480517 + 1059 158522905 - Dole_2895 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 2889 66.11 +1 3480519..3481952 + 477 158522906 - Dole_2896 - RND efflux system outer membrane lipoprotein 2890 54.53 0 3481973..3482878 + 301 158522907 - Dole_2897 - outer membrane phospholipase A 2891 52.68 0 3483494..3484780 + 428 158522908 - Dole_2898 - peptidase C14 caspase catalytic subunit p20 2892 50.71 0 3484851..3486179 + 442 158522909 - Dole_2899 - ankyrin 2893 58.78 0 3486185..3487579 + 464 158522910 - Dole_2900 - peptidase C14 caspase catalytic subunit p20 2894 58.55 0 3487607..3488431 + 274 158522911 - Dole_2901 - hypothetical protein 2895 58.86 0 3488449..3488922 + 157 158522912 - Dole_2902 - CMP/dCMP deaminase zinc-binding 2896 58.38 0 3489235..3490743 + 502 158522913 - Dole_2903 - acyl-CoA dehydrogenase domain-containing protein 2897 60.72 0 3490762..3491904 + 380 158522914 - Dole_2904 - acyl-CoA dehydrogenase type 2 2898 59.91 0 3492082..3492969 + 295 158522915 - Dole_2905 - hypothetical protein 2899 48.14 -1 3493451..3494524 - 357 158522916 - Dole_2906 - integrase family protein 2900 37.37 -2 3495029..3495424 + 131 158522917 - Dole_2907 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0