version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1885 63.07 +1 2293207..2294790 - 527 158521902 - Dole_1891 - GCN5-related N-acetyltransferase 1886 63.33 +1 2294815..2295324 - 169 158521903 - Dole_1892 - hypothetical protein 1887 62.71 +1 2295327..2296691 - 454 158521904 - Dole_1893 - lysine 2,3-aminomutase YodO family protein 1888 62.75 +1 2296907..2297596 - 229 158521905 - Dole_1894 - hypothetical protein 1889 63.57 +1 2297964..2300060 + 698 158521906 - Dole_1895 - short chain dehydrogenase 1890 50.78 0 2300069..2300452 + 127 158521907 - Dole_1896 - glyoxalase/bleomycin resistance protein/dioxygenase 1891 60.34 0 2300467..2301351 + 294 158521908 - Dole_1897 - aldolase 1892 47.85 -1 2301752..2301937 + 61 158521909 - Dole_1898 - hypothetical protein 1893 52.83 0 2302880..2304151 - 423 158521910 - Dole_1899 - YD repeat-containing protein 1894 59.04 0 2304331..2306100 - 589 158521911 - Dole_1900 - D-aminoacylase domain-containing protein 1895 42.19 -2 2306382..2306618 + 78 158521912 - Dole_1901 - prevent-host-death family protein 1896 41.55 -2 2306602..2307015 + 137 158521913 - Dole_1902 - hypothetical protein 1897 56.89 0 2307144..2307992 + 282 158521914 - Dole_1903 - methyltransferase type 11 1898 57.52 0 2308147..2308452 + 101 158521915 - Dole_1904 - hypothetical protein 1899 59.07 0 2308491..2309030 - 179 158521916 - Dole_1905 - NUDIX hydrolase 1900 62.36 0 2309027..2309839 - 270 158521917 - Dole_1906 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1901 63.33 +1 2309943..2310782 - 279 158521918 - Dole_1907 - phosphoribosyltransferase 1902 62.64 +1 2310787..2312028 - 413 158521919 - Dole_1908 - isocitrate dehydrogenase, NADP-dependent 1903 64.07 +1 2312343..2313113 - 256 158521920 - Dole_1909 - RNA methyltransferase 1904 61.14 0 2313110..2313742 - 210 158521921 - Dole_1910 - guanylate kinase 1905 54.76 0 2313755..2314048 - 97 158521922 - Dole_1911 - hypothetical protein 1906 59.55 0 2314223..2315107 - 294 158521923 - Dole_1912 - hypothetical protein 1907 56.85 0 2315263..2315802 - 179 158521924 - Dole_1913 - GTP-binding protein 1908 47.46 -1 2315811..2315987 - 58 158521925 - Dole_1914 - hypothetical protein 1909 57.20 0 2316229..2317041 - 270 158521926 - Dole_1915 - Fe-S cluster domain-containing protein 1910 59.94 0 2317324..2318394 - 356 158521927 - Dole_1916 - hypothetical protein 1911 60.27 0 2318421..2319248 - 275 158521928 - Dole_1917 - short chain dehydrogenase 1912 60.08 0 2319245..2320003 - 252 158521929 - Dole_1918 - short chain dehydrogenase 1913 58.48 0 2320189..2321067 - 292 158521930 - Dole_1919 - amidohydrolase 2 1914 53.43 0 2321203..2321844 - 213 158521931 - Dole_1920 - TetR family transcriptional regulator 1915 59.43 0 2321973..2323175 - 400 158521932 - Dole_1921 - acyl-CoA dehydrogenase domain-containing protein 1916 56.82 0 2323381..2324091 - 236 158521933 - Dole_1922 - phosphoglycerate mutase 1917 61.90 0 2324372..2325148 + 258 158521934 - Dole_1923 - electron transfer flavoprotein alpha/beta-subunit 1918 62.80 +1 2325157..2326140 + 327 158521935 - Dole_1924 - electron transfer flavoprotein alpha subunit 1919 57.95 0 2326522..2327358 + 278 158521936 - Dole_1925 - phosphate binding protein 1920 58.60 0 2327470..2328399 + 309 158521937 - Dole_1926 - phosphate ABC transporter, inner membrane subunit PstC 1921 58.31 0 2328409..2329293 + 294 158521938 - Dole_1927 - phosphate ABC transporter, inner membrane subunit PstA 1922 55.56 0 2329307..2330062 + 251 158521939 - Dole_1928 - phosphate ABC transporter, ATPase subunit 1923 53.60 0 2330249..2330929 + 226 158521940 - Dole_1929 - phosphate uptake regulator, PhoU 1924 56.55 0 2330942..2331643 + 233 158521941 - Dole_1930 - two component transcriptional regulator 1925 55.80 0 2331844..2333619 + 591 158521942 - Dole_1931 - PAS/PAC sensor signal transduction histidine kinase 1926 56.99 0 2333835..2336036 + 733 158521943 - Dole_1932 - esterase/lipase-like protein 1927 56.40 0 2336052..2336762 - 236 158521944 - Dole_1933 - hypothetical protein 1928 59.65 0 2336764..2338845 - 693 158521945 - Dole_1934 - elongation factor G 1929 61.54 0 2339034..2339462 - 142 158521946 - Dole_1935 - NUDIX hydrolase 1930 56.90 0 2339465..2340580 - 371 158521947 - Dole_1936 - DNA repair photolyase-like protein 1931 60.41 0 2340666..2341304 + 212 158521948 - Dole_1937 - beta-lactamase domain-containing protein 1932 52.38 0 2341462..2342196 + 244 158521949 - Dole_1938 - response regulator receiver protein 1933 48.32 -1 2342548..2343321 - 257 158521950 - Dole_1939 - TetR family transcriptional regulator 1934 58.25 0 2343735..2345303 + 522 158521951 - Dole_1940 - SH3 type 3 domain-containing protein 1935 55.60 0 2345450..2347726 + 758 158521952 - Dole_1941 - hypothetical protein 1936 51.84 0 2347844..2348605 - 253 158521953 - Dole_1942 - TetR family transcriptional regulator 1937 54.50 0 2349075..2353184 + 1369 158521954 - Dole_1943 - hypothetical protein 1938 54.99 0 2353270..2354613 + 447 158521955 - Dole_1944 - membrane protein involved in aromatic hydrocarbon degradation 1939 38.01 -2 2355165..2355698 + 177 158521956 - Dole_1945 - hypothetical protein 1940 59.76 0 2356063..2356902 - 279 158521957 - Dole_1946 - prephenate dehydrogenase 1941 63.00 +1 2356890..2357954 - 354 158521958 - Dole_1947 - chorismate synthase 1942 61.77 0 2358243..2358671 - 142 158521959 - Dole_1948 - hypothetical protein 1943 61.64 0 2358751..2360022 - 423 158521960 - Dole_1949 - 3-phosphoshikimate 1-carboxyvinyltransferase 1944 60.67 0 2360036..2361136 - 366 158521961 - Dole_1950 - prephenate dehydratase 1945 60.83 0 2361150..2362142 - 330 158521962 - Dole_1951 - 3-dehydroquinate synthase 1946 60.52 0 2362160..2362972 - 270 158521963 - Dole_1952 - phospho-2-dehydro-3-deoxyheptonate aldolase 1947 61.74 0 2363496..2366375 - 959 158521964 - Dole_1953 - DEAD/DEAH box helicase domain-containing protein 1948 57.28 0 2366482..2366694 + 70 158521965 - Dole_1954 - hypothetical protein 1949 55.61 0 2366891..2367496 + 201 158521966 - Dole_1955 - hypothetical protein 1950 57.72 0 2367740..2368600 - 286 158521967 - Dole_1956 - hypothetical protein 1951 61.87 0 2368631..2369047 - 138 158521968 - Dole_1957 - hypothetical protein 1952 60.36 0 2369216..2369929 - 237 158521969 - Dole_1958 - enoyl-CoA hydratase/isomerase 1953 49.94 -1 2370322..2371098 + 258 158521970 - Dole_1959 - glucose-1-phosphate cytidylyltransferase 1954 58.49 0 2371095..2372183 + 362 158521971 - Dole_1960 - CDP-glucose 4,6-dehydratase 1955 57.12 0 2372171..2372746 + 191 158521972 - Dole_1961 - dTDP-4-dehydrorhamnose 3,5-epimerase 1956 56.05 0 2372743..2373966 + 407 158521973 - Dole_1962 - C-methyltransferase 1957 52.35 0 2373963..2374814 + 283 158521974 - Dole_1963 - NAD-dependent epimerase/dehydratase 1958 49.76 -1 2374804..2375862 + 352 158521975 - Dole_1964 - methyltransferase type 11 1959 52.62 0 2375910..2376692 + 260 158521976 - Dole_1965 - cephalosporin hydroxylase 1960 54.86 0 2376697..2378220 + 507 158521977 - Dole_1966 - polysaccharide biosynthesis protein 1961 47.73 -1 2378263..2379165 + 300 158521978 - Dole_1967 - glycosyl transferase family protein 1962 52.73 0 2379419..2380372 + 317 158521979 - Dole_1968 - NAD-dependent epimerase/dehydratase 1963 48.44 -1 2380431..2381549 - 372 158521980 - Dole_1969 - glycosyl transferase group 1 1964 52.04 0 2381597..2382574 - 325 158521981 - Dole_1970 - glycosyl transferase family protein 1965 56.42 0 2382589..2383632 - 347 158521982 - Dole_1971 - glycosyl transferase family protein 1966 54.78 0 2384026..2385489 - 487 158521983 - Dole_1972 - hypothetical protein 1967 61.58 0 2385796..2387526 - 576 158521984 - Dole_1973 - AMP-dependent synthetase and ligase 1968 62.62 +1 2387523..2388560 - 345 158521985 - Dole_1974 - histone deacetylase superfamily protein 1969 59.64 0 2388720..2390684 - 654 158521986 - Dole_1975 - acetate--CoA ligase 1970 60.09 0 2390703..2392604 - 633 158521987 - Dole_1976 - acetyl-CoA hydrolase/transferase 1971 57.39 0 2392862..2393659 + 265 158521988 - Dole_1977 - response regulator receiver protein 1972 59.03 0 2393733..2394740 - 335 158521989 - Dole_1978 - hypothetical protein 1973 60.30 0 2394859..2395800 - 313 158521990 - Dole_1979 - 2-dehydropantoate 2-reductase 1974 54.78 0 2395843..2396742 - 299 158521991 - Dole_1980 - signal peptide peptidase SppA, 36K type 1975 56.09 0 2396865..2398679 - 604 158521992 - Dole_1981 - ribosomal protein S1 1976 62.18 0 2398785..2399453 - 222 158521993 - Dole_1982 - cytidylate kinase 1977 56.57 0 2399450..2400538 - 362 158521994 - Dole_1983 - histidinol-phosphate aminotransferase 1978 59.85 0 2400673..2401845 + 390 158521995 - Dole_1984 - hypothetical protein 1979 57.58 0 2401874..2402566 + 230 158521996 - Dole_1985 - ribonuclease H 1980 51.85 0 2402627..2402896 - 89 158521997 - Dole_1986 - hypothetical protein 1981 59.36 0 2403171..2404019 + 282 158521998 - Dole_1987 - hypothetical protein 1982 60.14 0 2404484..2405449 - 321 158521999 - Dole_1988 - low molecular weight phosphotyrosine protein phosphatase 1983 59.21 0 2405570..2406226 - 218 158522000 - Dole_1989 - methyltransferase type 11 1984 60.69 0 2406213..2406848 - 211 158522001 - Dole_1990 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0