version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1692 51.00 0 2030703..2031104 + 133 158521709 - Dole_1698 - PilT domain-containing protein 1693 45.59 -1 2031469..2031672 + 67 158521710 - Dole_1699 - hypothetical protein 1694 47.94 -1 2031644..2031910 + 88 158521711 - Dole_1700 - addiction module antitoxin 1695 51.05 0 2032334..2032858 - 174 158521712 - Dole_1701 - hypothetical protein 1696 31.73 -2 2032953..2033513 - 186 158521713 - Dole_1702 - hypothetical protein 1697 55.32 0 2033679..2039963 - 2094 158521714 - Dole_1703 - YD repeat-/RHS repeat-containing protein 1698 49.18 -1 2040043..2045310 - 1755 158521715 - Dole_1704 - polymorphic outer membrane protein 1699 60.11 0 2045873..2049397 + 1174 158521716 - Dole_1705 - transcription-repair coupling factor 1700 53.93 0 2049426..2050124 + 232 158521717 - Dole_1706 - SurA domain-containing protein 1701 54.78 0 2050187..2051137 + 316 158521718 - Dole_1707 - PpiC-type peptidyl-prolyl cis-trans isomerase 1702 55.73 0 2051187..2051945 + 252 158521719 - Dole_1708 - hypothetical protein 1703 57.85 0 2052012..2052794 + 260 158521720 - Dole_1709 - DNA repair protein RecO 1704 60.21 0 2052873..2053925 + 350 158521721 - Dole_1710 - GHMP kinase 1705 56.81 0 2054073..2054975 + 300 158521722 - Dole_1711 - glycyl-tRNA synthetase subunit alpha 1706 59.60 0 2054972..2057080 + 702 158521723 - Dole_1712 - glycyl-tRNA synthetase, beta subunit 1707 56.08 0 2057130..2057384 + 84 158521724 - Dole_1713 - hypothetical protein 1708 61.68 0 2057438..2058199 + 253 158521725 - Dole_1714 - purine phosphorylase family 1 1709 61.01 0 2058184..2060232 + 682 158521726 - Dole_1715 - DNA ligase, NAD-dependent 1710 61.35 0 2060248..2060529 + 93 158521727 - Dole_1716 - acylphosphatase 1711 49.08 -1 2060636..2060908 - 90 158521728 - Dole_1717 - histone family protein DNA-binding protein 1712 59.95 0 2061247..2062392 - 381 158521729 - Dole_1718 - signal recognition particle-docking protein FtsY 1713 57.46 0 2062433..2066047 - 1204 158521730 - Dole_1719 - chromosome segregation protein SMC 1714 51.43 0 2066736..2067503 + 255 158521731 - Dole_1720 - N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase 1715 50.00 -1 2067503..2068288 + 261 158521732 - Dole_1721 - glycosyl transferase family protein 1716 54.61 0 2068304..2069356 - 350 158521733 - Dole_1722 - radical SAM domain-containing protein 1717 53.90 0 2069384..2069665 - 93 158521734 - Dole_1723 - hypothetical protein 1718 53.81 0 2069832..2070539 + 235 158521735 - Dole_1724 - hypothetical protein 1719 60.99 0 2070605..2071027 - 140 158521736 - Dole_1725 - class I peptide chain release factor 1720 58.38 0 2071062..2072858 - 598 158521737 - Dole_1726 - GTP-binding protein LepA 1721 57.64 0 2072973..2073947 - 324 158521738 - Dole_1727 - rhomboid family protein 1722 60.93 0 2073982..2074818 - 278 158521739 - Dole_1728 - nicotinate-nucleotide pyrophosphorylase 1723 60.56 0 2074946..2077600 - 884 158521740 - Dole_1729 - valyl-tRNA synthetase 1724 46.50 -1 2077648..2077890 - 80 158521741 - Dole_1730 - hypothetical protein 1725 53.68 0 2077905..2079890 - 661 158521742 - Dole_1731 - ATPase 1726 60.03 0 2080097..2080834 + 245 158521743 - Dole_1732 - hypothetical protein 1727 56.09 0 2081143..2083383 + 746 158521744 - Dole_1733 - hypothetical protein 1728 60.05 0 2083588..2085084 - 498 158521745 - Dole_1734 - cobyric acid synthase CobQ 1729 62.01 0 2085081..2085767 - 228 158521746 - Dole_1735 - TonB family protein 1730 61.19 0 2085784..2086203 - 139 158521747 - Dole_1736 - biopolymer transport protein ExbD/TolR 1731 64.69 +1 2086219..2086824 - 201 158521748 - Dole_1737 - MotA/TolQ/ExbB proton channel 1732 60.77 0 2086821..2088551 - 576 158521749 - Dole_1738 - MotA/TolQ/ExbB proton channel 1733 60.62 0 2089047..2090006 + 319 158521750 - Dole_1739 - signal peptide peptidase SppA, 36K type 1734 60.05 0 2090020..2090865 - 281 158521751 - Dole_1740 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1735 57.33 0 2090964..2092088 - 374 158521752 - Dole_1741 - diguanylate cyclase 1736 59.45 0 2092188..2093753 - 521 158521753 - Dole_1742 - radical SAM domain-containing protein 1737 60.47 0 2094391..2095035 - 214 158521754 - Dole_1743 - metallophosphoesterase 1738 53.49 0 2095103..2095474 - 123 158521755 - Dole_1744 - hypothetical protein 1739 57.83 0 2095532..2096323 - 263 158521756 - Dole_1745 - thymidylate synthase-like protein 1740 58.04 0 2096400..2097998 + 532 158521757 - Dole_1746 - metallophosphoesterase 1741 58.20 0 2098060..2098815 + 251 158521758 - Dole_1747 - heat shock protein DnaJ domain-containing protein 1742 57.35 0 2098812..2099627 - 271 158521759 - Dole_1748 - beta-lactamase domain-containing protein 1743 63.50 +1 2099624..2100979 - 451 158521760 - Dole_1749 - MiaB-like tRNA modifying enzyme 1744 59.80 0 2101153..2102229 - 358 158521761 - Dole_1750 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1745 61.80 0 2102649..2104868 - 739 158521762 - Dole_1751 - methyl-accepting chemotaxis sensory transducer 1746 56.62 0 2105028..2105933 + 301 158521763 - Dole_1752 - diguanylate cyclase 1747 56.57 0 2106130..2108436 + 768 158521764 - Dole_1753 - FG-GAP repeat-containing protein 1748 56.67 0 2108481..2110811 + 776 158521765 - Dole_1754 - FG-GAP repeat-containing protein 1749 59.80 0 2111080..2113161 + 693 158521766 - Dole_1755 - GCN5-related N-acetyltransferase 1750 55.48 0 2113603..2115729 + 708 158521767 - Dole_1756 - FG-GAP repeat-containing protein 1751 56.91 0 2115767..2117959 + 730 158521768 - Dole_1757 - FG-GAP repeat-containing protein 1752 60.00 0 2118065..2118964 + 299 158521769 - Dole_1758 - ApbE family lipoprotein 1753 49.77 -1 2119260..2119478 - 72 158521770 - Dole_1759 - prevent-host-death family protein 1754 48.85 -1 2119480..2119872 - 130 158521771 - Dole_1760 - PilT domain-containing protein 1755 59.21 0 2120165..2122069 + 634 158521772 - Dole_1761 - small GTP-binding protein 1756 62.11 0 2122049..2123365 - 438 158521773 - Dole_1762 - 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1757 58.06 0 2123370..2125403 - 677 158521774 - Dole_1763 - ABC-type branched-chain amino acid transport systems periplasmic component-like protein 1758 60.85 0 2125422..2126366 - 314 158521775 - Dole_1764 - tRNA delta(2)-isopentenylpyrophosphate transferase 1759 60.68 0 2126385..2128004 - 539 158521776 - Dole_1765 - thiamine-phosphate pyrophosphorylase 1760 59.97 0 2128082..2128663 - 193 158521777 - Dole_1766 - metal dependent phophohydrolase 1761 58.68 0 2128721..2129734 - 337 158521778 - Dole_1767 - peptide chain release factor 2 1762 59.48 0 2129873..2131501 - 542 158521779 - Dole_1768 - apolipoprotein N-acyltransferase 1763 62.90 +1 2131498..2132373 - 291 158521780 - Dole_1769 - hypothetical protein 1764 54.94 0 2132668..2133639 - 323 158521781 - Dole_1770 - alpha/beta hydrolase fold 1765 60.50 0 2133707..2135572 - 621 158521782 - Dole_1771 - aldehyde ferredoxin oxidoreductase 1766 52.38 0 2135655..2136263 - 202 158521783 - Dole_1772 - TetR family transcriptional regulator 1767 52.14 0 2136574..2137530 - 318 158521784 - Dole_1773 - TPR repeat-containing protein 1768 56.00 0 2137536..2139983 - 815 158521785 - Dole_1774 - Patched family protein 1769 56.67 0 2140306..2140515 + 69 158521786 - Dole_1775 - FmdB family regulatory protein 1770 60.51 0 2140694..2142253 + 519 158521787 - Dole_1776 - histidine kinase 1771 59.87 0 2142240..2143637 + 465 158521788 - Dole_1777 - two component, sigma54 specific, Fis family transcriptional regulator 1772 62.73 +1 2143638..2144855 + 405 158521789 - Dole_1778 - acetyl-CoA acetyltransferase 1773 55.60 0 2145153..2145938 + 261 158521790 - Dole_1779 - endonuclease/exonuclease/phosphatase 1774 57.99 0 2146113..2146907 + 264 158521791 - Dole_1780 - hypothetical protein 1775 58.66 0 2146928..2147614 + 228 158521792 - Dole_1781 - glycerophosphoryl diester phosphodiesterase 1776 57.38 0 2148031..2148267 + 78 158521793 - Dole_1782 - prevent-host-death family protein 1777 50.80 0 2148267..2148701 + 144 158521794 - Dole_1783 - PilT domain-containing protein 1778 45.96 -1 2149005..2149598 - 197 158521795 - Dole_1784 - hypothetical protein 1779 58.14 0 2150224..2151747 - 507 158521796 - Dole_1785 - NifA subfamily transcriptional regulator 1780 50.21 -1 2153402..2153887 + 161 158521797 - Dole_1786 - MarR family transcriptional regulator 1781 56.59 0 2153988..2157986 + 1332 158521798 - Dole_1787 - polymorphic outer membrane protein 1782 54.41 0 2158421..2161699 + 1092 158521799 - Dole_1788 - polymorphic membrane protein Chlamydia 1783 51.75 0 2161724..2165095 + 1123 158521800 - Dole_1789 - hypothetical protein 1784 51.92 0 2165108..2167507 + 799 158521801 - Dole_1790 - polymorphic membrane protein Chlamydia 1785 55.57 0 2167666..2169675 + 669 158521802 - Dole_1791 - hypothetical protein 1786 54.48 0 2170069..2172867 + 932 158521803 - Dole_1792 - hypothetical protein 1787 60.00 0 2173072..2173746 + 224 158521804 - Dole_1793 - fibronectin type III domain-containing protein 1788 42.07 -2 2173788..2174714 + 308 158521805 - Dole_1794 - sulfotransferase 1789 45.40 -1 2174822..2175658 + 278 158521806 - Dole_1795 - hypothetical protein 1790 50.15 -1 2175686..2177047 + 453 158521807 - Dole_1796 - polysaccharide biosynthesis protein 1791 44.35 -2 2177044..2178096 + 350 158521808 - Dole_1797 - putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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