version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1575 58.22 0 1882601..1883038 + 145 158521592 - Dole_1581 - hypothetical protein 1576 57.34 0 1883079..1885382 + 767 158521593 - Dole_1582 - TPR repeat-containing protein 1577 55.15 0 1885419..1886564 + 381 158521594 - Dole_1583 - hypothetical protein 1578 56.93 0 1886735..1887874 + 379 158521595 - Dole_1584 - aspartate aminotransferase 1579 61.72 0 1887861..1889276 + 471 158521596 - Dole_1585 - RNA methyltransferase 1580 58.23 0 1889325..1889810 - 161 158521597 - Dole_1586 - hypothetical protein 1581 58.40 0 1890252..1890626 + 124 158521598 - Dole_1587 - hypothetical protein 1582 55.51 0 1890684..1891409 + 241 158521599 - Dole_1588 - type IV pilus assembly PilZ 1583 59.96 0 1891475..1892368 + 297 158521600 - Dole_1589 - alpha/beta hydrolase fold 1584 58.45 0 1892435..1893298 + 287 158521601 - Dole_1590 - nitroreductase 1585 55.41 0 1893428..1893889 + 153 158521602 - Dole_1591 - putative lipoprotein 1586 62.43 +1 1893912..1895114 + 400 158521603 - Dole_1592 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1587 55.70 0 1895186..1895878 - 230 158521604 - Dole_1593 - hypothetical protein 1588 51.60 0 1896064..1896375 + 103 158521605 - Dole_1594 - hypothetical protein 1589 60.33 0 1896391..1898079 - 562 158521606 - Dole_1595 - glutaminyl-tRNA synthetase 1590 61.15 0 1898449..1899246 - 265 158521607 - Dole_1596 - hypothetical protein 1591 57.41 0 1899462..1900304 + 280 158521608 - Dole_1597 - hypothetical protein 1592 62.69 +1 1900647..1902179 + 510 158521609 - Dole_1598 - mercuric reductase 1593 50.96 0 1902258..1902779 - 173 158521610 - Dole_1599 - acetyltransferase/acyltransferase 1594 49.94 -1 1902785..1903651 - 288 158521611 - Dole_1600 - TetR family transcriptional regulator 1595 57.19 0 1903942..1905123 + 393 158521612 - Dole_1601 - Acetyl-CoA acetyltransferase-like protein 1596 49.31 -1 1905124..1905555 + 143 158521613 - Dole_1602 - hypothetical protein 1597 56.64 0 1905565..1906332 + 255 158521614 - Dole_1603 - enoyl-CoA hydratase/isomerase 1598 54.98 0 1906346..1907509 + 387 158521615 - Dole_1604 - acyl-CoA dehydrogenase domain-containing protein 1599 55.34 0 1907526..1909106 + 526 158521616 - Dole_1605 - AMP-dependent synthetase and ligase 1600 53.27 0 1909220..1910578 + 452 158521617 - Dole_1606 - NADH:flavin oxidoreductase/NADH oxidase 1601 55.86 0 1910680..1911678 + 332 158521618 - Dole_1607 - amidohydrolase 2 1602 57.13 0 1911691..1912518 + 275 158521619 - Dole_1608 - short-chain dehydrogenase/reductase SDR 1603 51.37 0 1912542..1913234 + 230 158521620 - Dole_1609 - hypothetical protein 1604 53.53 0 1913305..1915260 + 651 158521621 - Dole_1610 - acetoacetyl-CoA synthase 1605 53.95 0 1915566..1916312 + 248 158521622 - Dole_1611 - hypothetical protein 1606 63.50 +1 1916317..1917642 + 441 158521623 - Dole_1612 - glycosyl transferase family protein 1607 52.01 0 1917887..1918459 + 190 158521624 - Dole_1613 - hypothetical protein 1608 50.19 -1 1918597..1918857 + 86 158521625 - Dole_1614 - hypothetical protein 1609 57.64 0 1918916..1919602 - 228 158521626 - Dole_1615 - response regulator receiver protein 1610 62.26 0 1919775..1920341 + 188 158521627 - Dole_1616 - hypothetical protein 1611 60.99 0 1920338..1922380 + 680 158521628 - Dole_1617 - translation elongation factor G 1612 56.46 0 1922539..1923459 + 306 158521629 - Dole_1618 - alpha/beta hydrolase domain-containing protein 1613 60.27 0 1923473..1925581 - 702 158521630 - Dole_1619 - hypothetical protein 1614 55.32 0 1925903..1926325 + 140 158521631 - Dole_1620 - MarR family transcriptional regulator 1615 62.12 0 1926385..1928625 + 746 158521632 - Dole_1621 - nitrate reductase 1616 48.97 -1 1928900..1929238 + 112 158521633 - Dole_1622 - type IV pilus assembly PilZ 1617 50.89 0 1929341..1929904 + 187 158521634 - Dole_1623 - hypothetical protein 1618 42.17 -2 1930387..1931868 + 493 158521635 - Dole_1624 - DnaJ central domain-containing protein 1619 37.46 -2 1931979..1932851 + 290 158521636 - Dole_1625 - hypothetical protein 1620 38.92 -2 1932916..1933470 + 184 158521637 - Dole_1626 - hypothetical protein 1621 63.48 +1 1933714..1935690 - 658 158521638 - Dole_1627 - ABC transporter-related protein 1622 61.06 0 1935841..1936821 - 326 158521639 - Dole_1628 - RND family efflux transporter MFP subunit 1623 63.55 +1 1936802..1938118 - 438 158521640 - Dole_1629 - outer membrane efflux protein 1624 57.40 0 1938386..1939810 - 474 158521641 - Dole_1630 - peptidase M48 Ste24p 1625 59.09 0 1939930..1940721 + 263 158521642 - Dole_1631 - cobyrinic acid ac-diamide synthase 1626 62.20 0 1940724..1941641 + 305 158521643 - Dole_1632 - parB-like partition protein 1627 60.04 0 1941931..1942458 + 175 158521644 - Dole_1633 - hypothetical protein 1628 59.70 0 1942689..1944080 - 463 158521645 - Dole_1634 - hypothetical protein 1629 55.25 0 1944101..1944643 - 180 158521646 - Dole_1635 - NapC/NirT cytochrome c domain-containing protein 1630 58.62 0 1945027..1945896 + 289 158521647 - Dole_1636 - dimethyladenosine transferase 1631 58.82 0 1945899..1946306 + 135 158521648 - Dole_1637 - hypothetical protein 1632 59.55 0 1946303..1947244 + 313 158521649 - Dole_1638 - radical SAM domain-containing protein 1633 62.06 0 1947265..1948197 + 310 158521650 - Dole_1639 - TPR repeat-containing protein 1634 57.25 0 1948266..1949486 + 406 158521651 - Dole_1640 - MscS mechanosensitive ion channel 1635 61.70 0 1949517..1950281 + 254 158521652 - Dole_1641 - cyclase family protein 1636 56.55 0 1950313..1951350 + 345 158521653 - Dole_1642 - enoyl-CoA hydratase/isomerase 1637 60.75 0 1951350..1952498 + 382 158521654 - Dole_1643 - saccharopine dehydrogenase 1638 58.93 0 1952509..1953141 + 210 158521655 - Dole_1644 - metal dependent phosphohydrolase 1639 58.37 0 1953179..1953937 + 252 158521656 - Dole_1645 - phosphoribosylglycinamide formyltransferase 1640 59.85 0 1954134..1956332 + 732 158521657 - Dole_1646 - catalase/peroxidase HPI 1641 58.48 0 1956431..1957786 - 451 158521658 - Dole_1647 - glutamate dehydrogenase 1642 52.23 0 1957891..1958472 - 193 158521659 - Dole_1648 - hypothetical protein 1643 62.57 +1 1958747..1960186 - 479 158521660 - Dole_1649 - two component, sigma54 specific, Fis family transcriptional regulator 1644 59.71 0 1960192..1962030 - 612 158521661 - Dole_1650 - histidine kinase 1645 61.61 0 1962085..1962915 - 276 158521662 - Dole_1651 - ABC transporter-related protein 1646 64.43 +1 1962912..1963985 - 357 158521663 - Dole_1652 - transport system permease protein 1647 58.91 0 1964000..1965160 - 386 158521664 - Dole_1653 - periplasmic binding protein 1648 60.18 0 1965543..1967807 - 754 158521665 - Dole_1654 - O-antigen polymerase 1649 44.44 -2 1968243..1968539 - 98 158521666 - Dole_1655 - excinuclease ABC subunit C 1650 58.37 0 1968731..1969417 - 228 158521667 - Dole_1656 - protein-tyrosine-phosphatase 1651 54.66 0 1969414..1971579 - 721 158521668 - Dole_1657 - non-specific protein-tyrosine kinase 1652 54.80 0 1971698..1972531 - 277 158521669 - Dole_1658 - polysaccharide export protein 1653 52.46 0 1972700..1973959 - 419 158521670 - Dole_1659 - hypothetical protein 1654 57.80 0 1974273..1976348 - 691 158521671 - Dole_1660 - translation elongation factor G 1655 63.64 +1 1976451..1977209 - 252 158521672 - Dole_1661 - hemolysin A 1656 61.19 0 1977295..1979175 - 626 158521673 - Dole_1662 - deoxyxylulose-5-phosphate synthase 1657 60.02 0 1979186..1980073 - 295 158521674 - Dole_1663 - polyprenyl synthetase 1658 53.25 0 1980060..1980305 - 81 158521675 - Dole_1664 - exodeoxyribonuclease VII, small subunit 1659 60.36 0 1980486..1981832 - 448 158521676 - Dole_1665 - exodeoxyribonuclease VII, large subunit 1660 63.31 +1 1982046..1982552 + 168 158521677 - Dole_1666 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1661 56.94 0 1982616..1984055 + 479 158521678 - Dole_1667 - cysteinyl-tRNA synthetase 1662 63.33 +1 1984359..1985138 + 259 158521679 - Dole_1668 - hypothetical protein 1663 55.01 0 1985493..1986101 + 202 158521680 - Dole_1669 - putative GAF sensor protein 1664 53.91 0 1986299..1986745 + 148 158521681 - Dole_1670 - BLUF domain-containing protein 1665 51.15 0 1987119..1987769 + 216 158521682 - Dole_1671 - hypothetical protein 1666 58.35 0 1987807..1989633 - 608 158521683 - Dole_1672 - AMP-dependent synthetase and ligase 1667 61.34 0 1990000..1991145 + 381 158521684 - Dole_1673 - peptidase M24 1668 59.62 0 1991142..1992035 + 297 158521685 - Dole_1674 - tyrosine recombinase XerD 1669 61.83 0 1992248..1993921 + 557 158521686 - Dole_1675 - PfaD family protein 1670 61.11 0 1994060..2000629 + 2189 158521687 - Dole_1676 - polyketide-type polyunsaturated fatty acid synthase, PfaA 1671 61.53 0 2000749..2007879 + 2376 158521688 - Dole_1677 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1672 52.77 0 2007903..2009780 - 625 158521689 - Dole_1678 - putative PAS/PAC sensor protein 1673 64.47 +1 2010011..2010238 + 75 158521690 - Dole_1679 - FmdB family regulatory protein 1674 51.75 0 2010290..2010517 + 75 158521691 - Dole_1680 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0