version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 183 65.95 0 175410..176249 + 279 126453377 - BURPS1106A_0185 - polyphosphate kinase 184 62.39 0 176281..177051 + 256 126452249 xth BURPS1106A_0186 - exodeoxyribonuclease III 185 65.92 0 177346..178410 - 354 126453715 - BURPS1106A_0187 - zinc-binding dehydrogenase family oxidoreductase 186 70.26 0 178620..179564 + 314 126452647 - BURPS1106A_0188 - AraC family transcriptional regulator 187 73.31 +1 179938..180990 - 350 126452125 - BURPS1106A_0189 - hypothetical protein 188 66.97 0 180980..182293 - 437 126454886 - BURPS1106A_0190 - major facilitator transporter 189 63.58 0 182305..182919 - 204 126454422 metW BURPS1106A_0191 - methionine biosynthesis protein MetW 190 66.58 0 182916..184061 - 381 126453127 metX BURPS1106A_0192 - homoserine O-acetyltransferase 191 68.41 0 184414..185103 - 229 126454066 slmA BURPS1106A_0193 - nucleoid occlusion protein 192 70.15 0 185070..185873 - 267 126453385 - BURPS1106A_0194 - HAD-superfamily hydrolase 193 64.22 0 185870..186769 - 299 126452255 argB BURPS1106A_0195 - acetylglutamate kinase 194 65.85 0 186946..187068 - 40 126451498 - BURPS1106A_0196 - hypothetical protein 195 78.17 +1 187094..187345 + 83 126454885 - BURPS1106A_0197 - hypothetical protein 196 69.01 0 187363..188643 + 426 126453480 - BURPS1106A_0198 - sensor histidine kinase 197 66.30 0 188663..189205 + 180 126452974 - BURPS1106A_0199 - Fis family DNA-binding response regulator 198 64.29 0 189632..190975 - 447 126452107 hslU BURPS1106A_0200 - ATP-dependent protease ATP-binding subunit 199 68.87 0 190985..191620 - 211 126451912 hslV BURPS1106A_0201 - ATP-dependent protease peptidase subunit 200 73.50 +1 191626..191742 - 38 126452750 - BURPS1106A_0202 - hypothetical protein 201 60.67 -1 191783..192199 - 138 126455040 dksA BURPS1106A_0203 - RNA polymerase-binding protein DksA 202 66.38 0 192254..192598 - 114 126452341 - BURPS1106A_0204 - hypothetical protein 203 62.12 -1 192760..193836 - 358 126453239 - BURPS1106A_0205 - CobW/P47K family protein 204 70.50 0 194014..195291 - 425 126454780 - BURPS1106A_0206 - hypothetical protein 205 69.67 0 195380..196312 - 310 126451479 xerC BURPS1106A_0207 - site-specific tyrosine recombinase XerC 206 71.14 0 196357..197094 - 245 126452571 - BURPS1106A_0208 - hypothetical protein 207 70.57 0 197118..197987 - 289 126453808 dapF BURPS1106A_0209 - diaminopimelate epimerase 208 66.33 0 198028..198912 - 294 126454911 htrB BURPS1106A_0210 - lipid A biosynthesis lauroyl acyltransferase 209 67.09 0 199179..200366 + 395 126451461 metK BURPS1106A_0211 - S-adenosylmethionine synthetase 210 73.45 +1 200534..200887 - 117 126452679 - BURPS1106A_0212 - hypothetical protein 211 66.22 0 201131..202024 + 297 126454571 - BURPS1106A_0213 - phytanoyl-CoA dioxygenase (PhyH) family protein 212 69.40 0 202108..202290 - 60 126451701 - BURPS1106A_0214 - hypothetical protein 213 64.73 0 202307..202513 - 68 126452493 - BURPS1106A_0215 - hypothetical protein 214 65.61 0 202592..203731 + 379 126454356 - BURPS1106A_0216 - aldo/keto reductase family oxidoreductase 215 68.28 0 203818..204003 - 61 126454634 - BURPS1106A_0217 - hypothetical protein 216 71.14 0 204271..205209 - 312 126451814 - BURPS1106A_0218 - hypothetical protein 217 73.00 +1 205256..205492 - 78 126453971 - BURPS1106A_0219 - hypothetical protein 218 71.86 0 205489..206778 - 429 126455134 - BURPS1106A_0220 - major facilitator family transporter 219 65.59 0 206841..207026 - 61 126453988 - BURPS1106A_0221 - hypothetical protein 220 56.82 -2 207002..207133 - 43 126455185 - BURPS1106A_0222 - hypothetical protein 221 65.26 0 207132..207344 + 70 126453733 - BURPS1106A_0223 - hypothetical protein 222 69.09 0 207385..208416 + 343 126454046 - BURPS1106A_0224 - serine/threonine protein kinase 223 74.40 +1 208693..209028 - 111 126452557 - BURPS1106A_0225 - hypothetical protein 224 68.50 0 209085..210503 - 472 126452218 - BURPS1106A_0226 - putative coniferyl aldehyde dehydrogenase 225 69.82 0 210538..212217 - 559 126454819 - BURPS1106A_0227 - acyl-CoA dehydrogenase domain-containing protein 226 69.16 0 212451..214094 + 547 126453931 - BURPS1106A_0228 - GMC family oxidoreductase 227 76.62 +1 214134..215510 - 458 126454663 fliK BURPS1106A_0229 - flagellar hook-length control protein FliK 228 71.52 0 215567..216019 - 150 126453479 fliJ BURPS1106A_0230 - flagellar export protein FliJ 229 72.52 0 216025..217596 - 523 126453967 fliI BURPS1106A_0231 - flagellar protein export ATPase FliI 230 73.86 +1 217590..218270 - 226 126453050 fliH BURPS1106A_0232 - flagellar assembly protein H 231 64.66 0 218263..219258 - 331 126452132 fliG BURPS1106A_0233 - flagellar motor switch protein G 232 69.78 0 219248..221044 - 598 126453288 fliF BURPS1106A_0234 - flagellar MS-ring protein 233 65.50 0 221293..221634 + 113 126453483 fliE BURPS1106A_0235 - flagellar hook-basal body complex protein FliE 234 66.67 0 221756..222190 + 144 126454587 fliS BURPS1106A_0236 - flagellar protein FliS 235 69.11 0 222187..222513 + 108 126454593 - BURPS1106A_0237 - hypothetical protein 236 78.51 +2 222623..224125 + 500 126451708 - BURPS1106A_0238 - hypothetical protein 237 72.33 0 224122..224439 + 105 126452833 - BURPS1106A_0239 - putative flagellar biosynthesis protein 238 70.69 0 224659..225378 + 239 126455053 - BURPS1106A_0240 - hypothetical protein 239 71.35 0 225466..226491 - 341 126452863 - BURPS1106A_0241 - putative xanthine dehydrogenase accessory factor 240 67.81 0 226690..228093 - 467 126452851 - BURPS1106A_0242 - amino acid permease 241 64.99 0 228335..228991 - 218 126453572 - BURPS1106A_0243 - LuxR family DNA-binding response regulator 242 77.00 +1 228988..229848 - 286 126454303 - BURPS1106A_0244 - putative sensor histidine kinase 243 63.55 0 230262..231032 - 256 126452194 - BURPS1106A_0245 - putative ferredoxin--NADP reductase 244 72.78 0 231245..231898 - 217 126453008 - BURPS1106A_0246 - LysE family translocator protein 245 72.32 0 231964..232776 - 270 126454198 - BURPS1106A_0247 - endonuclease/exonuclease/phosphatase family protein 246 72.16 0 232783..233346 - 187 126454807 - BURPS1106A_0248 - hypothetical protein 247 71.35 0 233370..233561 + 63 126452164 - BURPS1106A_0249 - hypothetical protein 248 67.28 0 233707..234687 + 326 126453536 - BURPS1106A_0250 - ATP-dependent protease domain-containing protein 249 71.03 0 234759..235880 + 373 126454680 - BURPS1106A_0251 - FAD-dependent oxidoreductase 250 66.35 0 236015..236329 + 104 126452268 hip BURPS1106A_0252 - high-potential iron-sulfur protein 251 67.67 0 236562..237854 + 430 126454714 - BURPS1106A_0253 - major facilitator family transporter 252 64.52 0 237900..238085 + 61 126452735 - BURPS1106A_0255 - hypothetical protein 253 53.59 -2 238076..238228 - 50 126451527 - BURPS1106A_0254 - hypothetical protein 254 62.80 0 238285..239913 + 542 126454101 dppA BURPS1106A_0256 - dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA 255 66.77 0 240025..241035 + 336 126455063 dppB BURPS1106A_0257 - dipeptide ABC transporter, permease protein DppB 256 70.38 0 241110..242051 + 313 126452395 dppC BURPS1106A_0258 - dipeptide ABC transporter, permease protein DppC 257 67.07 0 242053..243045 + 330 126453266 dppD BURPS1106A_0259 - dipeptide ABC transporter, ATP-binding protein DppD 258 68.93 0 243042..244058 + 338 126455308 dppF BURPS1106A_0260 - dipeptide transporter ATP-binding subunit 259 73.09 +1 244063..245199 + 378 126454311 - BURPS1106A_0261 - GumN family protein 260 68.23 0 245677..246633 - 318 126453132 - BURPS1106A_0262 - hypothetical protein 261 71.45 0 246630..247382 - 250 126454307 - BURPS1106A_0263 - hypothetical protein 262 70.33 0 247992..248756 - 254 126455197 - BURPS1106A_0264 - hypothetical protein 263 73.33 +1 248815..249894 - 359 126451983 - BURPS1106A_0265 - allophanate hydrolase, subunit 2 264 69.39 0 249891..250661 - 256 126453827 - BURPS1106A_0266 - putative allophanate hydrolase, subunit 1 265 62.77 0 250697..251209 + 170 126454754 - BURPS1106A_0267 - hypothetical protein 266 73.87 +1 251481..252077 - 198 126452206 - BURPS1106A_0268 - 5-formyltetrahydrofolate cyclo-ligase family protein 267 68.51 0 252099..254054 + 651 126453322 - BURPS1106A_0269 - Slt family transglycosylase 268 73.54 +1 254176..255135 + 319 126453488 - BURPS1106A_0270 - NAD-dependent epimerase/dehydratase family protein 269 70.68 0 255199..255846 + 215 126454638 - BURPS1106A_0271 - glutathione S-transferase domain-containing protein 270 72.62 0 255843..257084 + 413 126451805 cca BURPS1106A_0272 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 271 71.88 0 257225..257416 - 63 126452765 - BURPS1106A_0273 - hypothetical protein 272 62.61 0 257733..257954 - 73 126455267 - BURPS1106A_0274 - putative RebB protein 273 69.09 0 258449..258943 - 164 126454021 - BURPS1106A_0275 - FlgN family flagellar protein 274 71.59 0 258969..259313 - 114 126453570 flgM BURPS1106A_0276 - flagellar biosynthesis regulator protein FlgM 275 76.84 +1 259417..260940 - 507 126453246 flgA BURPS1106A_0277 - flagellar basal body P-ring biosynthesis protein FlgA 276 68.70 0 261200..261691 + 163 126451866 flgB BURPS1106A_0278 - flagellar basal body rod protein FlgB 277 65.02 0 261775..262200 + 141 126454889 flgC BURPS1106A_0279 - flagellar basal body rod protein FlgC 278 66.67 0 262254..263096 + 280 126454100 flgD BURPS1106A_0280 - flagellar basal body rod modification protein 279 64.57 0 263124..264365 + 413 126453793 flgE BURPS1106A_0281 - flagellar hook protein FlgE 280 68.77 0 264392..265153 + 253 126452329 flgF BURPS1106A_0282 - flagellar basal body rod protein FlgF 281 65.78 0 265187..265975 + 262 126454438 flgG BURPS1106A_0283 - flagellar basal body rod protein FlgG 282 68.46 0 265996..266718 + 240 126452858 flgH BURPS1106A_0284 - flagellar basal body L-ring protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0