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Burkholderia cepacia AMMD chromosome 2, complete sequence - 1..2646969 2346 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 276 66.52 0 304478..305812 + 444 115358246 - Bamb_3496 - hypothetical protein 277 67.57 0 305838..306392 + 184 115358247 - Bamb_3497 - carboxymuconolactone decarboxylase 278 63.33 0 306601..307500 + 299 115358248 - Bamb_3498 - aspartyl/asparaginyl beta-hydroxylase 279 73.29 +1 307683..308543 + 286 115358249 - Bamb_3499 - hypothetical protein 280 66.60 0 308658..310256 - 532 115358250 - Bamb_3500 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 281 61.88 -1 310379..310942 - 187 115358251 - Bamb_3501 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 282 72.02 +1 311263..312270 + 335 115358252 - Bamb_3502 - extracellular solute-binding protein 283 69.09 0 312254..313576 + 440 115358253 - Bamb_3503 - sodium:dicarboxylate symporter 284 72.22 +1 313587..314288 + 233 115358254 - Bamb_3504 - aspartate racemase 285 69.35 0 314373..315266 - 297 115358255 - Bamb_3505 - LysR family transcriptional regulator 286 70.01 0 315444..316610 + 388 115358256 - Bamb_3506 - extracellular ligand-binding receptor 287 68.70 0 316627..317166 + 179 115358257 - Bamb_3507 - hypothetical protein 288 71.28 +1 317159..318415 + 418 115358258 - Bamb_3508 - allantoate amidohydrolase 289 72.40 +1 318426..319262 - 278 115358259 - Bamb_3509 - cytochrome c, class I 290 70.43 0 319615..320916 - 433 115358260 - Bamb_3510 - hypothetical protein 291 67.32 0 320913..322736 - 607 115358261 - Bamb_3511 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 292 68.10 0 322859..323347 - 162 115358262 - Bamb_3512 - hypothetical protein 293 63.60 0 323325..324596 - 423 115358263 - Bamb_3513 - N-glycosyltransferase PgaC 294 64.71 0 324593..326686 - 697 115358264 - Bamb_3514 - polysaccharide deacetylase 295 68.80 0 326702..329566 - 954 115358265 - Bamb_3515 - hypothetical protein 296 70.30 0 329671..330441 - 256 115358266 - Bamb_3516 - hypothetical protein 297 65.12 0 330527..330979 - 150 115358267 - Bamb_3517 - hypothetical protein 298 67.47 0 331649..332641 - 330 115358268 - Bamb_3518 - LysR family transcriptional regulator 299 65.69 0 333287..334717 + 476 115358269 - Bamb_3519 - hypothetical protein 300 65.50 0 334782..335723 + 313 115358270 - Bamb_3520 - hypothetical protein 301 69.81 0 335732..336748 + 338 115358271 - Bamb_3521 - transglutaminase domain-containing protein 302 68.96 0 336842..340291 + 1149 115358272 - Bamb_3522 - transglutaminase domain-containing protein 303 71.61 +1 340504..343110 + 868 115358273 - Bamb_3523 - hypothetical protein 304 71.10 +1 343104..344162 + 352 115358274 - Bamb_3524 - transglutaminase domain-containing protein 305 67.03 0 344346..344618 + 90 115358275 - Bamb_3525 - hypothetical protein 306 67.85 0 344686..345618 - 310 115358276 - Bamb_3526 - proline iminopeptidase 307 66.99 0 345867..347093 + 408 115358277 - Bamb_3527 - acyltransferase 3 308 65.60 0 347122..347967 - 281 115358278 - Bamb_3528 - hypothetical protein 309 60.25 -1 347975..348379 - 134 115358279 - Bamb_3529 - hypothetical protein 310 54.99 -2 349061..349951 - 296 115358280 - Bamb_3530 - LysR family transcriptional regulator 311 59.76 -1 350096..350848 + 250 115358281 - Bamb_3531 - short chain dehydrogenase 312 53.70 -2 351110..351826 + 238 115358282 - Bamb_3532 - glutathione S-transferase domain-containing protein 313 64.88 0 352074..353138 - 354 115358283 - Bamb_3533 - aminotransferase, class V 314 69.88 0 353138..354319 - 393 115358284 - Bamb_3534 - thiamine pyrophosphate binding domain-containing protein 315 66.07 0 354316..356001 - 561 115358285 - Bamb_3535 - phosphoenolpyruvate phosphomutase 316 65.76 0 355998..356765 - 255 115358286 - Bamb_3536 - sugar nucleotidyltransferase-like protein 317 72.75 +1 356802..357803 - 333 115358287 - Bamb_3537 - hypothetical protein 318 66.17 0 357800..358609 - 269 115358288 - Bamb_3538 - 2OG-Fe(II) oxygenase 319 67.84 0 358606..359286 - 226 115358289 - Bamb_3539 - CDP-alcohol phosphatidyltransferase 320 67.66 0 359926..361440 + 504 115358290 - Bamb_3540 - Acetyl-CoA hydrolase 321 69.48 0 361641..362066 + 141 115358291 - Bamb_3541 - MerR family transcriptional regulator 322 69.40 0 362145..363023 - 292 115358292 - Bamb_3542 - helix-hairpin-helix DNA-binding, class 1 323 72.40 +1 363212..364762 - 516 115358293 - Bamb_3543 - RNA polymerase, sigma 38 subunit, RpoS 324 70.11 0 365070..365534 + 154 115358294 - Bamb_3544 - hypothetical protein 325 73.94 +1 365568..366419 + 283 115358295 - Bamb_3545 - SH3 type 3 domain-containing protein 326 66.99 0 366536..368395 - 619 115358296 - Bamb_3546 - dihydroxy-acid dehydratase 327 69.99 0 368810..369832 - 340 115358297 - Bamb_3547 - malate/L-lactate dehydrogenase 328 72.07 +1 369825..371417 - 530 115358298 - Bamb_3548 - aldehyde dehydrogenase 329 67.16 0 371488..373113 - 541 115358299 - Bamb_3549 - amino acid permease-associated region 330 69.02 0 373741..374676 + 311 115358300 - Bamb_3550 - proline racemase 331 71.63 +1 374673..375800 + 375 115358301 - Bamb_3551 - FAD dependent oxidoreductase 332 71.79 +1 375901..376134 + 77 115358302 - Bamb_3552 - ferredoxin 333 74.31 +1 376131..377399 + 422 115358303 - Bamb_3553 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 334 66.38 0 377533..377883 + 116 115358304 - Bamb_3554 - ArsR family transcriptional regulator 335 72.92 +1 377924..378307 + 127 115358305 - Bamb_3555 - protein of unknown function DUF395, YeeE/YedE 336 67.85 0 378309..378731 + 140 115358306 - Bamb_3556 - protein of unknown function DUF395, YeeE/YedE 337 71.23 +1 378856..379206 - 116 115358307 - Bamb_3557 - hypothetical protein 338 69.08 0 379401..380894 + 497 115358308 - Bamb_3558 - GntR family transcriptional regulator 339 69.20 0 381039..381314 - 91 115358309 - Bamb_3559 - hypothetical protein 340 71.94 +1 381411..382757 - 448 115358310 - Bamb_3560 - di-haem cytochrome c peroxidase 341 69.06 0 383231..384694 - 487 115358311 - Bamb_3561 - metallophosphoesterase 342 70.08 0 384875..385723 + 282 115358312 - Bamb_3562 - methyltransferase type 11 343 68.91 0 385766..386077 - 103 115358313 - Bamb_3563 - hypothetical protein 344 66.08 0 386444..387640 - 398 115358314 - Bamb_3564 - porin 345 68.65 0 387759..390179 - 806 115358315 - Bamb_3565 - Alpha-glucosidase 346 66.67 0 390207..391538 - 443 115358316 - Bamb_3566 - major facilitator transporter 347 57.48 -2 391555..391848 - 97 115358317 - Bamb_3567 - hypothetical protein 348 68.98 0 391925..392875 + 316 115358318 - Bamb_3568 - RpiR family transcriptional regulator 349 72.12 +1 392872..393879 + 335 115358319 - Bamb_3569 - peptidase T2, asparaginase 2 350 69.66 0 393907..395808 + 633 115358320 - Bamb_3570 - oligopeptide/dipeptide ABC transporter, ATPase subunit 351 63.98 0 395939..397501 + 520 115358321 - Bamb_3571 - extracellular solute-binding protein 352 67.43 0 397569..398489 + 306 115358322 - Bamb_3572 - binding-protein-dependent transport systems inner membrane component 353 67.56 0 398497..399390 + 297 115358323 - Bamb_3573 - binding-protein-dependent transport systems inner membrane component 354 71.65 +1 399390..400472 + 360 115358324 - Bamb_3574 - peptidase S58, DmpA 355 68.24 0 400469..401296 + 275 115358325 - Bamb_3575 - peptidase M55, D-aminopeptidase 356 68.83 0 401369..402337 + 322 115358326 - Bamb_3576 - AraC family transcriptional regulator 357 64.63 0 402492..402785 - 97 115358327 - Bamb_3577 - hypothetical protein 358 66.84 0 402782..403375 - 197 115358328 - Bamb_3578 - protocatechuate 3,4-dioxygenase, alpha subunit 359 66.81 0 403379..404086 - 235 115358329 - Bamb_3579 - protocatechuate 3,4-dioxygenase, beta subunit 360 73.05 +1 404388..404951 - 187 115358330 - Bamb_3580 - hypothetical protein 361 68.02 0 405072..405809 + 245 115358331 - Bamb_3581 - XRE family transcriptional regulator 362 72.04 +1 405887..406873 + 328 115358332 - Bamb_3582 - LysR family transcriptional regulator 363 64.17 0 407007..407366 + 119 115358333 - Bamb_3583 - hypothetical protein 364 63.64 0 407439..407735 + 98 115358334 - Bamb_3584 - hypothetical protein 365 63.78 0 408253..409707 + 484 115358335 - Bamb_3585 - TolC family type I secretion outer membrane protein 366 63.61 0 409707..411503 + 598 115358336 - Bamb_3586 - type I secretion system ATPase 367 63.65 0 411653..412879 + 408 115358337 - Bamb_3587 - HlyD family type I secretion membrane fusion protein 368 47.70 -2 414836..415399 + 187 115358338 - Bamb_3588 - hypothetical protein 369 53.18 -2 416436..419267 + 943 115358339 - Bamb_3589 - hypothetical protein 370 72.48 +1 419429..420700 - 423 115358340 - Bamb_3590 - amino acid permease-associated region 371 71.26 +1 420829..425355 - 1508 115358341 - Bamb_3591 - DEAD/DEAH box helicase domain-containing protein 372 70.86 0 425615..426139 - 174 115358342 - Bamb_3592 - hypothetical protein 373 64.40 0 426537..428258 + 573 115358343 - Bamb_3593 - gamma-glutamyltransferase 374 63.30 0 428522..429472 + 316 115358344 - Bamb_3594 - hypothetical protein 375 65.62 0 429528..429815 - 95 115358345 - Bamb_3595 - histone family protein nucleoid-structuring protein H-NS 66.96 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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