version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2862 45.39 +1 2899997..2900875 + 292 157693660 end1 BPUM_2907 - deoxyribonuclease I 2863 44.22 0 2900890..2901633 - 247 157693661 - BPUM_2908 - hypothetical protein 2864 45.57 +1 2901656..2902693 - 345 157693662 - BPUM_2909 - iron ABC transporter membrane protein 2865 45.72 +1 2902686..2903702 - 338 157693663 - BPUM_2910 - iron ABC transporter membrane protein 2866 39.94 0 2903773..2904726 - 317 157693664 - BPUM_2911 - iron ABC transporter 2867 43.56 0 2904866..2905774 - 302 157693665 - BPUM_2912 - lysophospholipase 2868 38.33 0 2905840..2906739 - 299 157693666 - BPUM_2913 - hydrolase 2869 38.69 0 2907047..2907475 - 142 157693667 psiE BPUM_2914 - phosphate-starvation-inducible protein PsiE 2870 43.12 0 2907513..2908820 - 435 157693668 - BPUM_2915 - sensor histidine kinase 2871 42.67 0 2908807..2909502 - 231 157693669 - BPUM_2916 - response regulator 2872 27.27 -2 2909601..2909699 + 32 157693670 - BPUM_2917 - hypothetical protein 2873 41.19 0 2909755..2910963 + 402 157693671 - BPUM_2918 - hypothetical protein 2874 27.40 -2 2911073..2913076 - 667 157693672 - BPUM_2919 - hypothetical protein 2875 34.62 -1 2914129..2915061 - 310 157693673 - BPUM_2921 - hypothetical protein 2876 35.94 -1 2915146..2915796 + 216 157693674 acpH BPUM_2922 - [acyl-carrier-protein] phosphodiesterase 2877 42.42 0 2915861..2917258 - 465 157693675 sufB BPUM_2923 - ABC transporter ATP-binding protein 2878 41.83 0 2917276..2917722 - 148 157693676 nifU BPUM_2924 - Fe-S cluster assembly protein NifU 2879 46.11 +1 2917712..2918932 - 406 157693677 csd BPUM_2925 - cysteine desulfurase 2880 42.16 0 2918932..2920245 - 437 157693678 sufD BPUM_2926 - iron ABC transporter membrane protein 2881 42.11 0 2920264..2921049 - 261 157693679 sufC BPUM_2927 - iron ABC transporter ATP-binding protein 2882 42.86 0 2921261..2921428 - 55 157693680 - BPUM_2928 - hypothetical protein 2883 43.90 0 2921614..2921982 - 122 157693681 - BPUM_2929 - carboxymuconolactone decarboxylase 2884 37.47 0 2922087..2922908 - 273 157693682 - BPUM_2930 - ABC transporter ATP-binding protein 2885 40.66 0 2922923..2923591 - 222 157693683 - BPUM_2931 - ABC transporter ATP-binding protein 2886 44.05 0 2923584..2924609 - 341 157693684 - BPUM_2932 - ABC transporter ATP-binding protein 2887 43.14 0 2924645..2924797 + 50 157693685 - BPUM_2933 - hypothetical protein 2888 41.81 0 2924975..2925316 - 113 157693686 - BPUM_2934 - hypothetical protein 2889 38.94 0 2925437..2925739 - 100 157693687 - BPUM_2935 - thioredoxin 2890 42.37 0 2925752..2926105 - 117 157693688 - BPUM_2936 - TOPRIM domain-containing protein 2891 37.80 0 2926225..2926470 - 81 157693689 - BPUM_2937 - hypothetical protein 2892 42.45 0 2926506..2926889 - 127 157693690 gcvH BPUM_2938 - glycine cleavage system protein H 2893 39.44 0 2926956..2927315 - 119 157693691 arsC BPUM_2939 - arsenate reductase (glutaredoxin) 2894 44.05 0 2927485..2929266 - 593 157693692 - BPUM_2940 - acyl-CoA dehydrogenase 2895 48.38 +2 2929281..2930456 - 391 157693693 - BPUM_2941 - acetyl-CoA acetyltransferase 2896 44.89 +1 2930469..2932856 - 795 157693694 - BPUM_2942 - 3-hydroxyacyl-CoA dehydrogenase 2897 41.30 0 2933056..2933193 + 45 157693695 - BPUM_2943 - hypothetical protein 2898 41.37 0 2933223..2933471 + 82 157693696 - BPUM_2944 - hypothetical protein 2899 41.09 0 2933484..2933831 + 115 157693697 - BPUM_2945 - hypothetical protein 2900 30.90 -2 2934035..2934898 + 287 157693698 - BPUM_2946 - hypothetical protein 2901 24.24 -2 2934917..2935180 + 87 157693699 - BPUM_2947 - hypothetical protein 2902 40.00 0 2935225..2935479 - 84 157693700 - BPUM_2948 - hypothetical protein 2903 44.16 0 2935552..2936382 - 276 157693701 - BPUM_2949 - iron ABC transporter 2904 43.18 0 2936531..2936977 - 148 157693702 - BPUM_2950 - hypothetical protein 2905 44.72 0 2937092..2937934 + 280 157693703 - BPUM_2951 - short chain dehydrogenase 2906 42.74 0 2937981..2939351 - 456 157693704 - BPUM_2952 - peptidase 2907 42.33 0 2939688..2940365 + 225 157693705 cssR BPUM_2953 - response regulator 2908 39.94 0 2940362..2941693 + 443 157693706 cssS BPUM_2954 - sensor histidine kinase 2909 35.76 -1 2941714..2941878 - 54 157693707 - BPUM_2955 - hypothetical protein 2910 40.39 0 2942071..2942949 + 292 157693708 - BPUM_2956 - TetR family transcriptional regulator 2911 41.72 0 2943029..2944423 - 464 157693709 fumC BPUM_2957 - fumarate hydratase 2912 32.74 -2 2944513..2944680 - 55 157693710 - BPUM_2958 - hypothetical protein 2913 41.40 0 2944795..2946219 + 474 157693711 gerAA BPUM_2959 - spore germination protein AA 2914 40.55 0 2946206..2947300 + 364 157693712 gerAB BPUM_2960 - spore germination protein AB 2915 39.84 0 2947297..2948418 + 373 157693713 gerAC BPUM_2961 - spore germination protein AC 2916 44.17 0 2948456..2948824 + 122 157693714 - BPUM_2962 - hypothetical protein 2917 40.57 0 2948872..2949507 - 211 157693715 - BPUM_2963 - response regulator 2918 44.13 0 2949504..2950568 - 354 157693716 - BPUM_2964 - sensor histidine kinase 2919 40.22 0 2950565..2951290 - 241 157693717 - BPUM_2965 - hypothetical protein 2920 40.46 0 2951360..2952229 - 289 157693718 - BPUM_2966 - hypothetical protein 2921 41.74 0 2952341..2953006 - 221 157693719 - BPUM_2967 - bacteriophage shock protein A 2922 43.00 0 2953022..2953414 - 130 157693720 - BPUM_2968 - hypothetical protein 2923 46.67 +1 2953749..2954318 - 189 157693721 - BPUM_2969 - cob(I)yrinic acid a,c-diamide adenosyltransferase 2924 29.27 -2 2954367..2954489 + 40 157693722 - BPUM_2970 - hypothetical protein 2925 43.37 0 2954508..2955254 + 248 157693723 - BPUM_2971 - 3-oxoacyl-[acyl-carrier-protein] reductase 2926 45.22 +1 2955272..2956297 - 341 157693724 pdxA BPUM_2972 - 4-hydroxythreonine-4-phosphate dehydrogenase 2927 43.90 0 2956273..2957616 - 447 157693725 - BPUM_2973 - hypothetical protein 2928 41.13 0 2957642..2959423 - 593 157693726 - BPUM_2974 - transcriptional regulator 2929 43.28 0 2959570..2960745 - 391 157693727 - BPUM_2975 - hypothetical protein 2930 41.79 0 2960742..2962148 - 468 157693728 - BPUM_2976 - SSS family solute/sodium (Na+) symporter 2931 44.84 +1 2962222..2963394 - 390 157693729 - BPUM_2977 - alcohol dehydrogenase 2932 44.44 0 2963402..2964301 - 299 157693730 dapA3 BPUM_2978 - dihydrodipicolinate synthase 2933 44.55 0 2964483..2965766 - 427 157693731 - BPUM_2979 - iron ABC transporter ATP-binding protein 2934 44.76 +1 2965763..2966821 - 352 157693732 - BPUM_2980 - iron ABC transporter membrane protein 2935 40.59 0 2966787..2967737 - 316 157693733 - BPUM_2981 - iron ABC transporter binding protein 2936 33.33 -2 2967814..2967906 - 30 157693734 - BPUM_2982 - hypothetical protein 2937 43.89 0 2967912..2969303 - 463 157693735 - BPUM_2983 - glycoside hydrolase 2938 40.63 0 2969324..2970817 - 497 157693736 uxaA BPUM_2984 - mannonate dehydratase 2939 42.73 0 2970814..2972271 - 485 157693737 uxaB BPUM_2985 - altronate oxidoreductase 2940 39.96 0 2972331..2973341 - 336 157693738 - BPUM_2986 - LacI family transcriptional regulator 2941 40.99 0 2973410..2974846 - 478 157693739 uxaC BPUM_2987 - glucuronate isomerase 2942 37.83 0 2974983..2976737 - 584 157693740 - BPUM_2988 - sensor histidine kinase 2943 39.00 0 2976741..2977463 - 240 157693741 - BPUM_2989 - response regulator 2944 43.26 0 2977640..2978455 - 271 157693742 fhuC BPUM_2990 - ferrichrome ABC transporter 2945 42.82 0 2978475..2979497 - 340 157693743 fhuG BPUM_2991 - ferrichrome ABC transporter membrane protein 2946 47.20 +1 2979498..2980550 - 350 157693744 fhuB BPUM_2992 - ferrichrome ABC transporter membrane protein 2947 28.21 -2 2980625..2980702 - 25 157693745 - BPUM_2993 - hypothetical protein 2948 40.89 0 2980810..2981748 + 312 157693746 - BPUM_2994 - ferrichrome ABC transporter 2949 42.22 0 2981784..2983190 - 468 157693747 - BPUM_2995 - APC family amino acid-polyamine-organocation transporter 2950 43.78 0 2983322..2983522 - 66 157693748 - BPUM_2996 - hypothetical protein 2951 40.28 0 2983680..2983823 - 47 157693749 sspJ BPUM_2997 - small acid-soluble spore protein J 2952 39.86 0 2983906..2984334 - 142 157693750 - BPUM_2998 - MarR family transcriptional regulator 2953 33.33 -2 2984380..2984526 - 48 157693751 - BPUM_2999 - hypothetical protein 2954 45.71 +1 2984507..2985007 + 166 157693752 - BPUM_3000 - hypothetical protein 2955 39.01 0 2985124..2986974 + 616 157693753 - BPUM_3001 - sulfatase 2956 40.75 0 2987108..2987902 + 264 157693754 - BPUM_3002 - molybdenum ABC transporter ATP-binding protein 2957 46.91 +1 2987902..2988564 + 220 157693755 - BPUM_3003 - molybdenum ABC transporter membrane protein 2958 41.96 0 2988605..2989450 - 281 157693756 - BPUM_3004 - aldo/keto reductase 2959 46.55 +1 2989520..2990389 - 289 157693757 - BPUM_3005 - ROK family protein 2960 42.56 0 2990453..2992468 - 671 157693758 - BPUM_3006 - CPA1 family monovalent cation:proton (H+) antiporter-1 2961 45.59 +1 2992787..2993398 - 203 157693759 - BPUM_3007 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0