version 1.0
Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1531 24.51 0 1580874..1581848 - 324 157737801 - Abu_1567 - sigma factor regulatory protein FecR/PupR family 1532 27.43 0 1581849..1582322 - 157 157737802 - Abu_1568 - ECF subfamily RNA polymerase sigma factor 1533 33.62 +1 1582459..1583520 + 353 157737803 speB Abu_1569 - arginase 1534 30.03 0 1583543..1584844 - 433 157737804 leuA2 Abu_1570 - 2-isopropylmalate synthase 1535 24.05 0 1585025..1585810 - 261 157737805 - Abu_1571 - AraC family transcriptional regulator 1536 23.94 0 1585820..1586149 - 109 157737806 - Abu_1572 - PemK family transcriptional regulator 1537 25.29 0 1586143..1586403 - 86 157737807 - Abu_1573 - hypothetical protein 1538 23.58 0 1586472..1587425 - 317 157737808 - Abu_1574 - AraC family transcriptional regulator 1539 26.72 0 1587544..1589661 + 705 157737809 - Abu_1575 - TonB-dependent receptor protein 1540 33.33 +1 1589687..1590262 - 191 157737810 sodB Abu_1576 - superoxide dismutase 1541 25.81 0 1590340..1591548 - 402 157737811 - Abu_1577 - hypothetical protein 1542 32.57 +1 1591620..1592540 - 306 157737812 ppa Abu_1578 - putative manganese-dependent inorganic pyrophosphatase 1543 29.67 0 1592660..1593259 - 199 157737813 - Abu_1579 - hypothetical protein 1544 25.56 0 1593265..1593804 - 179 157737814 - Abu_1580 - putative asparaginase 1545 29.14 0 1593755..1595161 - 468 157737815 aspA Abu_1581 - aspartate ammonia-lyase 1546 22.17 -1 1595227..1595907 - 226 157737816 - Abu_1582 - two-component response regulator 1547 23.64 0 1595910..1597034 - 374 157737817 - Abu_1583 - two-component sensor histidine kinase 1548 29.78 0 1597106..1598542 - 478 157737818 - Abu_1584 - sodium:alanine symporter 1549 30.17 0 1598675..1599370 - 231 157737819 pfs Abu_1585 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1550 29.57 0 1599363..1600292 - 309 157737820 fabD Abu_1586 - malonyl coenzyme A-(acyl carrier protein) transacylase 1551 36.56 +2 1600427..1601014 - 195 157737821 slyD Abu_1587 - peptidyl-prolyl cis-trans isomerase 1552 28.47 0 1601036..1601980 - 314 157737822 - Abu_1588 - hypothetical protein 1553 31.81 +1 1601982..1602506 - 174 157737823 - Abu_1589 - OmpA/MotB precursor 1554 28.38 0 1602667..1603959 - 430 157737824 tolB Abu_1590 - translocation protein TolB 1555 27.05 0 1603964..1604695 - 243 157737825 - Abu_1591 - hypothetical protein 1556 25.13 0 1604701..1605090 - 129 157737826 exbD3 Abu_1592 - biopolymer transport protein ExbD 1557 28.88 0 1605095..1605655 - 186 157737827 exbB3 Abu_1593 - biopolymer transport protein ExbB 1558 33.86 +1 1605662..1606039 - 125 157737828 atpC Abu_1594 - F0F1 ATP synthase subunit epsilon 1559 35.84 +2 1606063..1607457 - 464 157737829 atpD Abu_1595 - F0F1 ATP synthase subunit beta 1560 30.29 0 1607477..1608364 - 295 157737830 atpG Abu_1596 - F0F1 ATP synthase subunit gamma 1561 32.94 +1 1608375..1609892 - 505 157737831 atpA Abu_1597 - F0F1 ATP synthase subunit alpha 1562 23.35 -1 1609914..1610444 - 176 157737832 atpH Abu_1598 - F0F1 ATP synthase subunit delta 1563 30.41 0 1610444..1610956 - 170 157737833 atpF Abu_1599 - ATP synthase F0 sector, subunit B 1564 31.44 +1 1610970..1611392 - 140 157737834 atpF' Abu_1600 - ATP synthase F0 sector, B' subunit 1565 25.26 0 1611511..1612365 - 284 157737835 parB Abu_1601 - transcriptional regulator involved in chromosome partitioning ParB 1566 28.83 0 1612386..1613162 - 258 157737836 parA Abu_1602 - ATPases involved in chromosome partitioning ParA 1567 23.43 -1 1613159..1613794 - 211 157737837 birA Abu_1603 - biotin--protein ligase 1568 24.22 0 1613888..1614589 - 233 157737838 - Abu_1604 - hypothetical protein 1569 25.50 0 1614821..1615714 + 297 157737839 - Abu_1605 - auxin efflux carrier protein 1570 27.90 0 1615719..1616639 - 306 157737840 fmt Abu_1606 - methionyl-tRNA formyltransferase 1571 27.45 0 1616649..1617413 - 254 157737841 proB Abu_1607 - gamma-glutamyl kinase 1572 29.85 0 1617410..1618501 - 363 157737842 obg Abu_1608 - GTP-binding protein 1573 33.33 +1 1618631..1618888 - 85 157737843 rpmA Abu_1609 - 50S ribosomal protein L27 1574 31.13 +1 1618913..1619230 - 105 157737844 rplU Abu_1610 - 50S ribosomal protein L21 1575 26.48 0 1619364..1620998 - 544 157737845 dnaG Abu_1611 - DNA primase 1576 22.67 -1 1621080..1622129 + 349 157737846 - Abu_1612 - hypothetical protein 1577 29.78 0 1622177..1622851 + 224 157737847 rnc Abu_1613 - ribonuclease III 1578 30.64 +1 1622855..1623931 + 358 157737848 aroC Abu_1614 - chorismate synthase 1579 24.70 0 1623921..1624673 + 250 157737849 - Abu_1615 - hypothetical protein 1580 31.34 +1 1624748..1625599 - 283 157737850 - Abu_1616 - M48 family peptidase 1581 24.75 0 1625653..1626339 - 228 157737851 - Abu_1617 - hypothetical protein 1582 27.08 0 1626436..1626915 + 159 157737852 - Abu_1618 - phosphoglycerate/bisphosphoglycerate mutase, putative 1583 27.05 0 1626931..1627344 - 137 157737853 - Abu_1619 - hypothetical protein 1584 27.59 0 1627346..1628686 - 446 157737854 trmE Abu_1620 - tRNA modification GTPase TrmE 1585 25.57 0 1628689..1629564 - 291 157737855 - Abu_1621 - hypothetical protein 1586 27.72 0 1629585..1631186 - 533 157737856 oxaA Abu_1622 - putative inner membrane protein translocase component YidC 1587 22.52 -1 1631179..1631511 - 110 157737857 - Abu_1623 - hypothetical protein 1588 33.33 +1 1631831..1631965 - 44 157737858 rpmH Abu_1625 - 50S ribosomal protein L34 1589 29.38 0 1632040..1634619 - 859 157737859 clpB Abu_1626 - ATP-dependent Clp protease, ATP-binding subunit 1590 27.63 0 1634738..1635316 + 192 157737860 rnhB Abu_1627 - ribonuclease HII 1591 28.57 0 1635318..1635632 - 104 157737861 - Abu_1628 - hypothetical protein 1592 28.19 0 1635642..1636535 - 297 157737862 - Abu_1629 - hypothetical protein 1593 27.78 0 1636655..1636996 + 113 157737863 - Abu_1630 - hypothetical protein 1594 28.08 0 1636993..1637487 - 164 157737864 msrA Abu_1631 - peptide methionine sulfoxide reductase 1595 27.22 0 1637490..1637849 - 119 157737865 msrB Abu_1632 - methionine sulfoxide reductase B 1596 25.37 0 1637861..1638475 - 204 157737866 - Abu_1633 - fumarylacetoacetate (FAA) hydrolase 1597 28.07 0 1638538..1638879 + 113 157737867 - Abu_1634 - hypothetical protein 1598 26.64 0 1638876..1639532 - 218 157737868 - Abu_1635 - phosphohydrolase (MUTT/NUDIX family protein) 1599 29.47 0 1639533..1640801 - 422 157737869 bioA Abu_1636 - 7,8-diaminopelargonic acid synthetase 1600 23.90 0 1640849..1643446 - 865 157737870 - Abu_1637 - two-component sensor histidine kinase 1601 30.40 0 1643562..1645094 - 510 157737871 purH Abu_1638 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1602 32.66 +1 1645294..1647507 - 737 157737872 purL Abu_1639 - phosphoribosylformylglycinamidine synthase II 1603 26.44 0 1647572..1648543 - 323 157737873 - Abu_1640 - hypothetical protein 1604 28.55 0 1648614..1649804 + 396 157737874 - Abu_1641 - M24/M37 family peptidase 1605 29.14 0 1649846..1650418 - 190 157737875 folE Abu_1642 - GTP cyclohydrolase I 1606 24.53 0 1650441..1651394 - 317 157737876 corA Abu_1643 - magnesium and cobalt transport protein 1607 19.56 -2 1651410..1652600 - 396 157737877 ctsF Abu_1644 - transformation system protein CtsF 1608 24.85 0 1652602..1653603 - 333 157737878 ctsE Abu_1645 - transformation system protein CtsE 1609 25.48 0 1653875..1654447 - 190 157737879 - Abu_1646 - hypothetical protein 1610 23.46 -1 1654459..1655106 - 215 157737880 - Abu_1647 - hypothetical protein 1611 27.52 0 1655167..1655820 + 217 157737881 - Abu_1648 - hypothetical protein 1612 27.08 0 1655848..1656423 - 191 157737882 - Abu_1649 - hypothetical protein 1613 29.12 0 1656508..1657290 - 260 157737883 - Abu_1650 - N6 adenine-specific DNA methyltransferase, D12 class 1614 29.22 0 1657398..1658345 - 315 157737884 - Abu_1651 - phage tail protein D 1615 27.05 0 1658339..1658545 - 68 157737885 - Abu_1652 - hypothetical protein 1616 29.27 0 1658542..1658910 - 122 157737886 - Abu_1653 - hypothetical protein 1617 32.34 +1 1658910..1660814 - 634 157737887 - Abu_1654 - TP901 family phage tail tape measure protein , putative 1618 27.90 0 1660960..1661235 - 91 157737888 - Abu_1655 - hypothetical protein 1619 33.54 +1 1661249..1661740 - 163 157737889 - Abu_1656 - phage major tail tube protein 1620 31.48 +1 1661742..1662926 - 394 157737890 - Abu_1657 - phage tail sheath protein 1621 30.89 +1 1662954..1663199 - 81 157737891 - Abu_1658 - hypothetical protein 1622 27.89 0 1663189..1663794 - 201 157737892 - Abu_1659 - tail fiber assembly protein 1623 30.90 +1 1663807..1664916 - 369 157737893 - Abu_1660 - hypothetical protein 1624 27.86 0 1664913..1665551 - 212 157737894 - Abu_1661 - tail protein I, putative 1625 28.83 0 1665523..1666698 - 391 157737895 - Abu_1662 - baseplate assembly protein J, putative 1626 29.56 0 1666695..1667012 - 105 157737896 - Abu_1663 - putative baseplate assembly protein W 1627 30.33 0 1667012..1667743 - 243 157737897 - Abu_1664 - baseplate assembly protein V, putative 1628 28.93 0 1667740..1668057 - 105 157737898 - Abu_1665 - hypothetical protein 1629 29.39 0 1668155..1668382 - 75 157737899 - Abu_1666 - hypothetical protein 1630 24.16 0 1668375..1668701 - 108 157737900 - Abu_1667 - hypothetical protein 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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