version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2448 47.07 0 2686239..2686784 + 181 196157273 - MADE_02472 - hypothetical protein 2449 43.17 0 2686826..2688238 + 470 196157274 - MADE_02473 - O-antigen polymerase 2450 43.24 0 2688272..2688685 + 137 196157275 - MADE_02474 - hypothetical protein 2451 38.89 -1 2688682..2689437 - 251 196157276 - MADE_02475 - hypothetical protein 2452 43.65 0 2689430..2690098 - 222 196157277 - MADE_02476 - capsular polysaccharide biosynthesis protein, putative 2453 42.58 0 2690180..2692396 - 738 196157278 - MADE_02477 - putative Exopolysaccharide biosynthesis protein 2454 46.54 0 2692423..2692884 - 153 196157279 - MADE_02478 - Periplasmic protein involved in polysaccharide export 2455 43.79 0 2692968..2694143 - 391 196157280 - MADE_02479 - hypothetical protein 2456 41.51 0 2694853..2696307 + 484 196157281 - MADE_02480 - Sugar transferase involved in lipopolysaccharide synthesis 2457 43.40 0 2696337..2697746 + 469 196157282 - MADE_02481 - mannose-1-phosphate guanylyltransferase 2458 47.62 0 2697881..2698237 - 118 196157283 - MADE_02482 - 50S ribosomal protein L20 2459 43.43 0 2698256..2698453 - 65 196157284 - MADE_02483 - ribosomal protein L35 2460 47.13 0 2698572..2699006 - 144 196157285 - MADE_02484 - Translation initiation factor 3 2461 46.17 0 2699220..2701136 - 638 196157286 - MADE_02485 - threonyl-tRNA synthetase 2462 46.10 0 2701596..2702480 + 294 196157287 - MADE_02486 - hypothetical protein 2463 48.80 +1 2702532..2703281 + 249 196157288 - MADE_02487 - pteridine reductase 2464 47.47 0 2703326..2704351 + 341 196157289 - MADE_02488 - hypothetical protein 2465 47.37 0 2704358..2705461 - 367 196157290 - MADE_02489 - putative mechanosensitive channel protein (MscS family) 2466 43.06 0 2705567..2706193 - 208 196157291 - MADE_02490 - Abortive infection protein 2467 46.83 0 2706590..2707441 + 283 196157292 - MADE_02491 - putative rpiR-family transcriptional regulatory protein 2468 46.59 0 2707616..2708158 + 180 196157293 - MADE_02492 - hypothetical protein 2469 38.51 -1 2708190..2708363 + 57 196157294 - MADE_02493 - hypothetical protein 2470 48.19 0 2708406..2709677 + 423 196157295 - MADE_02494 - amidase 2471 50.57 +1 2709797..2711374 + 525 196157296 - MADE_02495 - gamma-glutamyltranspeptidase, putative 2472 48.72 +1 2711445..2712263 + 272 196157297 - MADE_02496 - hypothetical protein 2473 50.12 +1 2712274..2713554 + 426 196157298 - MADE_02497 - aminotransferase, class V 2474 48.62 +1 2713547..2714782 + 411 196157299 - MADE_02498 - N-carbamoyl-L-amino acid amidohydrolase 2475 48.91 +1 2714901..2715266 + 121 196157300 - MADE_02499 - hypothetical protein 2476 36.75 -2 2715299..2715415 - 38 196157301 - MADE_02500 - hypothetical protein 2477 46.33 0 2715775..2717328 + 517 196157302 - MADE_02501 - xanthine/uracil permease family protein 2478 45.84 0 2717572..2720001 + 809 196157303 - MADE_02502 - TonB-dependent receptor 2479 44.25 0 2720223..2720396 + 57 196157304 - MADE_02503 - hypothetical protein 2480 44.61 0 2720431..2722434 - 667 196157305 - MADE_02504 - Signal transduction histidine kinase 2481 44.19 0 2722596..2723516 - 306 196157306 - MADE_02505 - putative response regulator 2482 42.92 0 2723715..2723933 - 72 196157307 - MADE_02506 - response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2483 40.40 -1 2723984..2724280 - 98 196157308 - MADE_02507 - response regulator 2484 47.11 0 2724469..2724831 + 120 196157309 - MADE_02508 - probable sensor/response hybrid, putative 2485 43.72 0 2724951..2725961 - 336 196157310 - MADE_02509 - adenosine deaminase 2486 47.22 0 2726282..2727613 + 443 196157311 - MADE_02510 - Xanthine/uracil/vitamin C permease 2487 43.56 0 2727750..2728052 - 100 196157312 - MADE_02511 - hypothetical protein 2488 46.60 0 2728113..2728994 - 293 196157313 - MADE_02512 - hypothetical protein 2489 47.13 0 2729026..2729670 - 214 196157314 - MADE_02513 - transcriptional regulator, TetR family protein 2490 38.46 -1 2729827..2729943 + 38 196157315 - MADE_02514 - hypothetical protein 2491 46.02 0 2730051..2731493 + 480 196157316 - MADE_02515 - putative xanthine dehydrogenase, XdhA subunit 2492 49.01 +1 2731486..2733852 + 788 196157317 - MADE_02516 - xanthine dehydrogenase, molybdopterin binding subunit 2493 49.68 +1 2733849..2734790 + 313 196157318 - MADE_02517 - Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family protein 2494 46.52 0 2734864..2735280 + 138 196157319 - MADE_02518 - uricase-like protein 2495 49.55 +1 2735327..2735659 + 110 196157320 - MADE_02519 - Transthyretin 2496 46.56 0 2735665..2736972 + 435 196157321 - MADE_02520 - guanine deaminase 2497 46.14 0 2737004..2738284 + 426 196157322 - MADE_02521 - predicted membrane protein 2498 42.91 0 2738305..2739588 - 427 196157323 - MADE_02522 - putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator 2499 44.17 0 2739819..2740178 - 119 196157324 - MADE_02523 - hypothetical transcriptional regulator 2500 47.11 0 2740370..2740870 + 166 196157325 - MADE_02524 - putative aldehyde dehydrogenase subunit III 2501 48.96 +1 2740867..2743164 + 765 196157326 - MADE_02525 - Membrane-bound aldehyde dehydrogenase, large subunit 2502 44.24 0 2743339..2743833 - 164 196157327 - MADE_02526 - hypothetical protein 2503 44.76 0 2744094..2744732 + 212 196157328 - MADE_02527 - putative NADPH-quinone reductase 2504 46.81 0 2744770..2746668 + 632 196157329 - MADE_02528 - glutathione-regulated potassium-efflux system protein KefC 2505 48.84 +1 2746837..2748048 + 403 196157330 - MADE_02529 - putative multidrug resistance protein (substrate binding lipoprotein) 2506 47.70 0 2748052..2751099 + 1015 196157331 - MADE_02530 - acriflavin resistance protein ei VT8 2507 44.91 0 2751431..2753365 + 644 196157332 - MADE_02531 - diguanylate cyclase/phosphodiesterase 2508 49.25 +1 2753855..2754388 + 177 196157333 - MADE_02532 - hypothetical protein 2509 43.21 0 2754348..2756069 - 573 196157334 - MADE_02533 - putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) 2510 42.84 0 2756428..2757468 + 346 196157335 - MADE_02534 - transcriptional factor 2511 44.38 0 2757465..2758550 - 361 196157336 - MADE_02535 - putative cell division protein FtsZ 2512 45.13 0 2759110..2760186 - 358 196157337 - MADE_02536 - hypothetical protein 2513 48.07 0 2760346..2760759 - 137 196157338 - MADE_02537 - putative bacterial regulatory protein, MarR 2514 35.06 -2 2760761..2760934 - 57 196157339 - MADE_02538 - hypothetical protein 2515 47.55 0 2761057..2762421 + 454 196157340 - MADE_02539 - Homogentisate 1,2-dioxygenase 2516 49.18 +1 2762533..2762898 + 121 196157341 - MADE_02540 - glyoxalase family protein 2517 44.79 0 2763121..2764194 - 357 196157342 - MADE_02541 - 4-hydroxyphenylpyruvate dioxygenase 2518 49.02 +1 2764402..2764605 + 67 196157343 - MADE_02542 - hypothetical protein 2519 41.38 -1 2764790..2765137 + 115 196157344 - MADE_02543 - arsenate reductase 2520 49.43 +1 2765131..2766267 + 378 196157345 - MADE_02544 - succinyl-diaminopimelate desuccinylase 2521 47.78 0 2766283..2766981 + 232 196157346 - MADE_02545 - D-alanyl-D-alanine carboxypeptidase 2522 48.11 0 2767014..2767277 + 87 196157347 - MADE_02546 - hypothetical protein 2523 47.45 0 2767428..2768681 + 417 196157348 - MADE_02547 - proton/glutamate symporter 2524 44.65 0 2768810..2769136 - 108 196157349 - MADE_02548 - hypothetical protein 2525 44.64 0 2769195..2769530 - 111 196157350 - MADE_02549 - putative HIT family hydrolase 2526 45.50 0 2769598..2770641 - 347 196157351 - MADE_02550 - succinylglutamate desuccinylase 2527 44.69 0 2770856..2772220 - 454 196157352 - MADE_02551 - sensory box/GGDEF domain/EAL domain protein 2528 45.35 0 2772432..2774945 - 837 196157353 - MADE_02552 - putative maltodextrin phosphorylase 2529 48.03 0 2775127..2776779 - 550 196157354 - MADE_02553 - phosphoglucomutase, alpha-D-glucose phosphate-specific 2530 45.67 0 2776825..2777643 - 272 196157355 - MADE_02554 - SeqA protein 2531 48.21 0 2777923..2778870 + 315 196157356 - MADE_02555 - MoxR protein 2532 44.98 0 2778943..2780067 + 374 196157357 - MADE_02556 - hypothetical protein 2533 47.04 0 2780064..2782127 + 687 196157358 - MADE_02557 - transglutaminase family protein 2534 48.41 +1 2782722..2783570 + 282 196157359 - MADE_02558 - Formate/nitrite transporter 2535 46.20 0 2783706..2785523 + 605 196157360 - MADE_02559 - Serine/threonine protein kinase 2536 49.28 +1 2785554..2785829 + 91 196157361 - MADE_02560 - cyanate hydratase 2537 41.07 -1 2786101..2786268 + 55 196157362 - MADE_02561 - cyanate hydratase 2538 46.26 0 2786372..2788459 - 695 196157363 - MADE_02562 - elongation factor EF-2 2539 44.99 0 2788643..2789740 - 365 196157364 - MADE_02563 - methyltransferase 2540 45.77 0 2789733..2790158 - 141 196157365 - MADE_02564 - uncharacterized small membrane protein 2541 47.17 0 2790190..2790861 - 223 196157366 - MADE_02565 - predicted hydrolase of the alpha/beta-hydrolase fold 2542 48.06 0 2790873..2791775 - 300 196157367 - MADE_02566 - putative transcriptional regulator, LysR family protein 2543 41.50 0 2791986..2792279 + 97 196157368 - MADE_02567 - hypothetical protein 2544 47.49 0 2792341..2793195 - 284 196157369 - MADE_02568 - 2-dehydro-3-deoxyphosphooctonate aldolase 2545 43.48 0 2793216..2793560 - 114 196157370 - MADE_02569 - Invasion gene expression up-regulator, SirB 2546 34.19 -2 2793660..2793776 + 38 196157371 - MADE_02570 - hypothetical protein 2547 44.89 0 2793808..2795373 - 521 196157372 - MADE_02571 - response regulator 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.