IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3609	 65.74	0	4173478..4174233	+	251	117618988	-	AHA_3743	-	secreted protein, suppressor for copper-sensitivity C
3610	 67.32	0	4174245..4174397	+	50	117618252	-	AHA_3744	-	hypothetical protein
3611	 68.64	+1	4174473..4174928	+	151	117617795	-	AHA_3745	-	suppressor for copper-sensitivity D
3612	 57.14	0	4175115..4175492	+	125	117621093	-	AHA_3746	-	DnaJ domain-containing protein
3613	 61.69	0	4175516..4176058	+	180	117618611	-	AHA_3747	-	hypothetical protein
3614	 56.77	-1	4176071..4176838	+	255	117620454	-	AHA_3748	-	hypothetical protein
3615	 63.68	0	4176850..4177752	+	300	117620867	-	AHA_3749	-	hypothetical protein
3616	 58.16	0	4177959..4178240	+	93	117618329	-	AHA_3750	-	hypothetical protein
3617	 59.20	0	4178299..4178673	+	124	117620139	-	AHA_3751	-	hypothetical protein
3618	 50.84	-2	4178866..4180110	-	414	117620785	-	AHA_3752	-	multidrug transporter-like protein
3619	 50.06	-2	4180198..4181106	+	302	117619067	-	AHA_3753	-	LysR family transcriptional regulator
3620	 44.51	-2	4181200..4182282	-	360	117618323	-	AHA_3754	-	hypothetical protein
3621	 63.83	0	4182339..4184633	-	764	117619627	parC	AHA_3755	-	DNA topoisomerase IV subunit A
3622	 64.08	0	4184717..4186612	-	631	117618295	parE	AHA_3756	-	DNA topoisomerase IV subunit B
3623	 66.77	0	4186727..4188736	-	669	117618909	-	AHA_3757	-	transport protein YdhK
3624	 65.86	0	4188738..4189604	-	288	117620113	-	AHA_3758	-	HlyD family secretion protein
3625	 61.11	0	4189597..4189866	-	89	117620708	-	AHA_3759	-	hypothetical protein
3626	 64.68	0	4189933..4190334	-	133	117619165	-	AHA_3760	-	glutathione-dependent formaldehyde-activating, GFA
3627	 66.19	0	4190372..4190995	-	207	117619595	-	AHA_3761	-	mutator MutT protein
3628	 65.65	0	4190998..4191585	-	195	117620949	-	AHA_3762	-	esterase YqiA
3629	 65.69	0	4191595..4192413	-	272	117621551	-	AHA_3763	-	Icc protein
3630	 54.14	-1	4192440..4192886	-	148	117619765	-	AHA_3764	-	phosphohydrolase
3631	 62.87	0	4192888..4193598	-	236	117620429	-	AHA_3765	-	hypothetical protein
3632	 57.52	0	4193783..4195159	+	458	117620693	-	AHA_3766	-	HAS ABC exporter outer membrane component
3633	 66.11	0	4195263..4196690	-	475	117618061	hldE	AHA_3767	-	bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
3634	 64.18	0	4196996..4197919	+	307	117619813	htrB	AHA_3768	-	lipid A biosynthesis lauroyl acyltransferase
3635	 63.89	0	4198072..4198539	+	155	117621331	-	AHA_3769	-	TonB domain-containing protein
3636	 62.29	0	4198649..4199608	-	319	117619283	-	AHA_3770	-	adenylate cyclase
3637	 54.88	-1	4199773..4200459	+	228	117618887	-	AHA_3771	-	hypothetical protein
3638	 63.74	0	4200483..4201748	+	421	117618270	-	AHA_3772	-	Pho4 family protein
3639	 63.64	0	4201896..4202357	+	153	117617827	-	AHA_3773	-	ybaK/ebsC protein
3640	 66.75	0	4202397..4203659	-	420	117617528	-	AHA_3774	-	hypothetical protein
3641	 67.77	+1	4203884..4204606	-	240	117617835	-	AHA_3775	-	ribosomal protein serine acetyltransferase
3642	 66.21	0	4204596..4205033	-	145	117620513	-	AHA_3776	-	hypothetical protein
3643	 66.67	0	4205051..4205518	-	155	117620830	-	AHA_3777	-	OsmC/Ohr family protein
3644	 71.89	+1	4205647..4207083	+	478	117619323	-	AHA_3778	-	GntR family transcriptional regulator
3645	 68.01	+1	4207099..4207992	-	297	117619976	-	AHA_3779	-	LysR family transcriptional regulator
3646	 64.18	0	4208120..4208521	+	133	117619114	-	AHA_3780	-	murein hydrolase exporter
3647	 65.36	0	4208514..4209203	+	229	117619480	-	AHA_3781	-	LrgB family protein
3648	 65.68	0	4209300..4210214	+	304	117618877	-	AHA_3782	-	hypothetical protein
3649	 64.05	0	4210291..4211169	+	292	117618254	-	AHA_3783	-	hypothetical protein
3650	 68.20	+1	4211256..4212494	-	412	117619276	-	AHA_3784	-	multifunctional CCA protein
3651	 66.73	0	4212835..4214412	+	525	117621302	exeA	AHA_3785	-	general secretion pathway protein A
3652	 70.03	+1	4214412..4215095	+	227	117620761	-	AHA_3786	-	general secretion pathway protein B
3653	 66.67	0	4215293..4216354	+	353	117620493	mutY	AHA_3787	-	A/G-specific adenine glycosylase
3654	 53.48	-1	4216363..4216635	+	90	117619597	-	AHA_3788	-	hypothetical protein
3655	 64.32	0	4216639..4217829	+	396	117621296	-	AHA_3789	-	membrane-bound lytic murein transglycosylase C
3656	 61.42	0	4217896..4218276	-	126	117620765	-	AHA_3790	-	OB-fold nucleic acid binding domain-containing protein
3657	 61.85	0	4218430..4219530	+	366	117617463	-	AHA_3791	-	phosphatidylcholine-sterol acyltransferase
3658	 63.25	0	4219591..4220292	-	233	117621240	-	AHA_3792	-	hypothetical protein
3659	 62.98	0	4220559..4221617	+	352	117619103	-	AHA_3793	-	outer membrane protein A
3660	 67.19	0	4221703..4222272	-	189	117618513	-	AHA_3794	-	hypothetical protein
3661	 63.08	0	4222272..4223918	-	548	117620228	-	AHA_3795	-	paraquat-inducible protein B
3662	 62.22	0	4223911..4225191	-	426	117619635	-	AHA_3796	-	paraquat-inducible protein A
3663	 61.98	0	4225369..4225731	+	120	117618943	-	AHA_3797	-	Hfq protein
3664	 63.60	0	4225871..4226554	-	227	117619462	-	AHA_3798	-	CbbY family protein
3665	 65.31	0	4226527..4227630	-	367	117619577	-	AHA_3799	-	sensory box/GGDEF family protein, putative
3666	 61.67	0	4227635..4229275	-	546	117620127	-	AHA_3800	-	GGDEF family protein
3667	 64.83	0	4229370..4230242	-	290	117619615	dapA-2	AHA_3801	-	dihydrodipicolinate synthase
3668	 62.97	0	4230523..4231551	+	342	117620051	-	AHA_3802	-	ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase)
3669	 60.67	0	4231701..4232918	+	405	117620757	glgC	AHA_3803	-	glucose-1-phosphate adenylyltransferase
3670	 61.81	0	4232908..4234368	+	486	117621301	glgA	AHA_3804	-	glycogen synthase
3671	 52.54	-1	4235158..4235511	+	117	117619585	-	AHA_3811	-	hypothetical protein
3672	 62.38	0	4235506..4235715	-	69	117620030	-	AHA_3810	-	hypothetical protein
3673	 62.62	0	4236015..4237424	+	469	117620744	nhaC	AHA_3812	-	Na+/H+ antiporter NhaC
3674	 68.94	+1	4237530..4238453	+	307	117621227	-	AHA_3813	-	transcriptional regulator
3675	 64.49	0	4238653..4239798	+	381	117617776	-	AHA_3814	-	ABC transporter, periplasmic substrate-binding protein
3676	 66.17	0	4239871..4240884	+	337	117618244	-	AHA_3815	-	ABC transporter, ATP-binding protein
3677	 65.33	0	4240881..4241849	+	322	117618184	-	AHA_3816	-	ABC transporter, permease protein
3678	 64.83	0	4241948..4242763	+	271	117617613	-	AHA_3817	-	ABC transporter, permease protein
3679	 67.30	0	4242793..4244223	+	476	117621075	-	AHA_3818	-	gamma-aminobutyraldehyde dehydrogenase
3680	 62.16	0	4244380..4244712	-	110	117620948	-	AHA_3819	-	hypothetical protein
3681	 68.38	+1	4245048..4245923	-	291	117618447	-	AHA_3820	-	drug/metabolite exporter family transporter
3682	 65.36	0	4246018..4246476	+	152	117617711	-	AHA_3821	-	AsnC family transcriptional regulator
3683	 65.35	0	4246595..4247200	-	201	117619360	-	AHA_3822	-	maltose O-acetyltransferase
3684	 62.76	0	4247204..4248865	-	553	117619150	treC	AHA_3823	-	alpha,alpha-phosphotrehalase
3685	 62.98	0	4248934..4250454	-	506	117618690	treP	AHA_3824	-	trehalose(maltose)-specific PTS system components IIBC
3686	 66.77	0	4250556..4251503	-	315	117620069	treR	AHA_3825	-	trehalose repressor
3687	 65.93	0	4251714..4252664	+	316	117617777	-	AHA_3826	-	transporter
3688	 63.59	0	4252732..4252926	+	64	117620395	-	AHA_3827	-	mercuric reductase (Hg(II) reductase)
3689	 64.59	0	4253059..4254117	+	352	117618845	-	AHA_3828	-	L-asparaginase, type II
3690	 63.58	0	4254208..4255341	-	377	117620155	-	AHA_3829	-	putative Ca2+/Na+ antiporter
3691	 59.52	0	4255585..4256172	+	195	117619713	-	AHA_3830	-	hypothetical protein
3692	 61.88	0	4256233..4256796	-	187	117621268	mgsA	AHA_3831	-	methylglyoxal synthase
3693	 65.53	0	4256780..4258885	-	701	117621447	-	AHA_3832	-	hypothetical protein
3694	 58.54	0	4259088..4259567	-	159	117618962	bfr	AHA_3833	-	bacterioferritin
3695	 54.79	-1	4259710..4260012	-	100	117618229	-	AHA_3834	-	hypothetical protein
3696	 62.18	0	4260054..4260365	+	103	117620649	-	AHA_3835	-	transcriptional activator HlyU
3697	 68.17	+1	4260362..4262428	+	688	117620721	-	AHA_3837	-	hypothetical protein
3698	 68.33	+1	4262415..4263134	-	239	117619253	-	AHA_3836	-	short chain dehydrogenase/reductase family oxidoreductase
3699	 61.05	0	4263341..4264354	+	337	117621297	-	AHA_3838	-	chemotaxis protein CheV
3700	 65.76	0	4264415..4265854	-	479	117618250	-	AHA_3839	-	transporter gate domain-containing protein
3701	 62.60	0	4265931..4266446	-	171	117621019	-	AHA_3840	-	hypothetical protein
3702	 61.31	0	4266919..4268262	-	447	117619365	-	AHA_3841	-	Ion channel family protein
3703	 61.72	0	4268972..4269739	-	255	117617622	-	AHA_3846	-	hypothetical protein
3704	 61.29	0	4269811..4270182	+	123	117620045	folB	AHA_3847	-	dihydroneopterin aldolase
3705	 66.27	0	4270182..4270691	+	169	117618693	folK-2	AHA_3848	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
3706	 66.67	0	4270813..4271295	+	160	117618198	-	AHA_3849	-	DNA-binding protein
3707	 65.80	0	4271305..4272693	-	462	117618058	-	AHA_3850	-	major facilitator transporter
3708	 65.06	0	4272755..4273873	-	372	117618352	-	AHA_3851	-	cobalamin synthesis protein/P47K family protein
62.23	MEAN

5.38	STD DEV




Last Updated: Dec 04, 2