IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3362	 61.87	0	3888431..3888889	-	152	117620572	-	AHA_3468	-	hypothetical protein
3363	 66.11	0	3889097..3891070	+	657	117620272	-	AHA_3469	-	sensory box protein
3364	 58.78	0	3891139..3891645	-	168	117619831	-	AHA_3470	-	hypothetical protein
3365	 64.21	0	3891909..3894185	+	758	117619616	-	AHA_3471	-	immune inhibitor A
3366	 56.30	-1	3894569..3894703	-	44	117619216	-	AHA_3474	-	hypothetical protein
3367	 66.82	0	3894929..3896206	+	425	117618537	-	AHA_3475	-	proline iminopeptidase
3368	 67.57	0	3896306..3899866	+	1186	117618358	-	AHA_3476	-	ABC transporter, ATP-binding protein
3369	 55.56	-1	3899922..3900164	-	80	117617534	-	AHA_3477	-	hypothetical protein
3370	 68.28	+1	3900246..3901421	-	391	117621064	-	AHA_3478	-	extracellular alkaline serine protease
3371	 65.89	0	3901541..3902833	-	430	117621403	-	AHA_3479	-	putative thiosulfate sulfurtransferase
3372	 64.52	0	3902862..3903794	-	310	117618467	-	AHA_3480	-	thermolabile glutaminase
3373	 61.26	0	3903907..3904239	-	110	117618679	-	AHA_3481	-	hypothetical protein
3374	 62.50	0	3904254..3904949	-	231	117619178	trmB	AHA_3482	-	tRNA (guanine-N(7)-)-methyltransferase
3375	 65.45	0	3905316..3906383	+	355	117619828	-	AHA_3483	-	aminopeptidase Y
3376	 64.97	0	3906566..3907747	+	393	117620769	-	AHA_3484	-	aminotransferase, classes I and II
3377	 64.12	0	3907812..3909344	-	510	117620916	-	AHA_3485	-	EAL domain-containing protein
3378	 65.56	0	3909647..3910552	+	301	117621434	-	AHA_3486	-	hypothetical protein
3379	 68.38	+1	3910646..3913093	-	815	117618473	-	AHA_3487	-	ABC-type transport system, permease component
3380	 66.80	0	3913090..3913815	-	241	117618524	-	AHA_3488	-	ABC transporter, ATP-binding protein
3381	 62.17	0	3913814..3914413	+	199	117619110	-	AHA_3489	-	acyl-CoA thioesterase I
3382	 59.79	0	3914497..3915441	-	314	117617728	-	AHA_3490	-	chemotaxis protein CheV
3383	 62.61	0	3915737..3930880	-	5047	117618784	-	AHA_3491	-	hypothetical protein
3384	 63.48	0	3931109..3932770	-	553	117620516	-	AHA_3492	-	hypothetical protein
3385	 58.81	0	3932889..3933524	-	211	117619951	-	AHA_3493	-	hemolysin III
3386	 65.01	0	3933748..3935253	+	501	117619706	-	AHA_3494	-	group II decarboxylase
3387	 53.80	-1	3935358..3935909	+	183	117620603	ispZ	AHA_3495	-	intracellular septation protein A
3388	 64.65	0	3935935..3936231	+	98	117617855	-	AHA_3496	-	YciI-like protein
3389	 63.89	0	3936313..3937104	-	263	117619469	cysQ-2	AHA_3497	-	3'(2'),5'-bisphosphate nucleotidase
3390	 60.44	0	3937251..3937571	+	106	117618885	-	AHA_3498	-	ComEA protein
3391	 59.51	0	3937685..3938578	+	297	117618873	galU	AHA_3499	-	UTP-glucose-1-phosphate uridylyltransferase
3392	 60.87	0	3938792..3940189	+	465	117618661	-	AHA_3500	-	dipeptide/tripeptide permease
3393	 60.19	0	3940263..3941234	-	323	117619260	-	AHA_3501	-	response regulator receiver domain-containing protein
3394	 63.16	0	3941560..3943155	-	531	117617501	-	AHA_3502	-	hypothetical protein
3395	 65.49	0	3941575..3942252	+	225	117618099	-	AHA_3503	-	hypothetical protein
3396	 61.64	0	3942322..3943176	+	284	117620088	-	AHA_3504	-	DNA replication protein, putative
3397	 67.14	0	3943305..3943940	+	211	117621456	-	AHA_3505	-	NAD-dependent epimerase/dehydratase family protein
3398	 65.58	0	3944051..3945247	-	398	117619862	-	AHA_3506	-	ABC-type multidrug transport system, permease component
3399	 65.17	0	3945351..3946487	-	378	117620273	-	AHA_3507	-	ABC-type multidrug transport system, permease component
3400	 65.77	0	3946487..3947491	-	334	117618109	-	AHA_3508	-	membrane-fusion protein
3401	 63.58	0	3947565..3948923	-	452	117618828	-	AHA_3509	-	outer membrane efflux protein
3402	 57.04	0	3949262..3950227	+	321	117619221	-	AHA_3510	-	tRNA-dihydrouridine synthase B
3403	 55.22	-1	3950253..3950549	+	98	117617872	fis	AHA_3511	-	DNA-binding protein Fis
3404	 61.45	0	3950619..3951251	-	210	117618459	-	AHA_3512	-	amino acid transporter LysE
3405	 54.07	-1	3957236..3957640	-	134	117620034	-	AHA_3517	-	iron-sulfur cluster insertion protein ErpA
3406	 62.21	0	3957677..3958372	-	231	117620607	-	AHA_3518	-	hypothetical protein
3407	 64.87	0	3958459..3959853	-	464	117619175	-	AHA_3519	-	chloride channel protein
3408	 64.80	0	3960076..3961362	+	428	117619735	hemL	AHA_3520	-	glutamate-1-semialdehyde-2,1-aminomutase
3409	 62.75	0	3961572..3962387	+	271	117618477	-	AHA_3521	-	hypothetical protein
3410	 63.46	0	3962448..3963350	-	300	117618811	-	AHA_3522	-	hypothetical protein
3411	 65.70	0	3963607..3964329	-	240	117621040	-	AHA_3523	-	PAP2 family protein
3412	 64.73	0	3964517..3965032	+	171	117618120	-	AHA_3524	-	hypothetical protein
3413	 63.63	0	3965108..3966688	-	526	117617783	-	AHA_3525	-	response regulator
3414	 63.72	0	3966803..3967684	-	293	117619015	-	AHA_3526	-	LysR family transcriptional regulator
3415	 59.35	0	3967841..3968305	+	154	117618589	-	AHA_3527	-	SMR family multidrug efflux pump
3416	 63.55	0	3968293..3968613	+	106	117618209	-	AHA_3528	-	SMR family multidrug efflux pump
3417	 67.41	0	3968713..3969114	-	133	117617482	-	AHA_3529	-	glyoxylase I family protein
3418	 65.76	0	3969157..3971478	-	773	117619028	mrcB	AHA_3530	-	penicillin-binding protein 1B
3419	 69.00	+1	3971730..3974900	-	1056	117619450	hrpB	AHA_3531	-	ATP-dependent helicase HrpB
3420	 70.37	+1	3974322..3974861	+	179	117621020	-	AHA_3532	-	2'-5' RNA ligase
3421	 59.68	0	3974904..3975647	+	247	117617592	sfsA	AHA_3533	-	sugar fermentation stimulation protein
3422	 55.56	-1	3975767..3976216	+	149	117619241	dksA	AHA_3534	-	RNA polymerase-binding protein DksA
3423	 67.44	0	3976336..3977238	+	300	117619247	-	AHA_3535	-	glutamyl-Q tRNA(Asp) synthetase
3424	 64.20	0	3977560..3979059	+	499	117620345	-	AHA_3536	-	poly(A) polymerase
3425	 62.16	0	3979071..3979580	+	169	117619770	folK-1	AHA_3537	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
3426	 63.65	0	3979577..3980371	+	264	117619024	panB	AHA_3538	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
3427	 65.62	0	3980559..3981416	+	285	117618576	panC	AHA_3539	-	pantoate--beta-alanine ligase
3428	 63.26	0	3981481..3982008	-	175	117619895	-	AHA_3540	-	hypothetical protein
3429	 63.95	0	3982010..3982450	-	146	117619506	-	AHA_3541	-	methylamine utilization protein-like protein
3430	 67.94	+1	3982752..3983534	-	260	117620844	-	AHA_3542	-	activator of (R)-2-hydroxyglutaryl-CoA dehydratase
3431	 62.95	0	3983544..3984620	-	358	117621255	-	AHA_3543	-	2-hydroxyglutaryl-CoA dehydratase, D-component
3432	 60.85	0	3984930..3985703	-	257	117617932	-	AHA_3544	-	ABC transporter, permease protein
3433	 60.68	0	3985700..3986617	-	305	117618393	-	AHA_3545	-	ABC transporter, ATP-binding protein
3434	 57.82	0	3986729..3987259	-	176	117621142	hpt	AHA_3546	-	hypoxanthine phosphoribosyltransferase
3435	 59.84	0	3987460..3988074	+	204	117617452	-	AHA_3547	-	LitR, transcriptional regulator
3436	 64.87	0	3988149..3988760	-	203	117620222	-	AHA_3548	-	3-octaprenyl-4-hydroxybenzoate decarboxylase UbiX
3437	 63.97	0	3988757..3990127	-	456	117620663	mpl	AHA_3549	-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
3438	 59.13	0	3990306..3990836	+	176	117619370	ppa	AHA_3550	-	inorganic pyrophosphatase
3439	 63.43	0	3990862..3991170	-	102	117620001	-	AHA_3551	-	hypothetical protein
3440	 55.56	-1	3991145..3991243	+	32	117618375	-	AHA_3552	-	hypothetical protein
3441	 60.75	0	3991349..3992227	+	292	117618339	-	AHA_3553	-	hypothetical protein
3442	 57.27	0	3992485..3993027	+	180	117618888	-	AHA_3554	-	hypothetical protein
3443	 61.17	0	3993072..3993362	+	96	117619470	-	AHA_3555	-	hypothetical protein
3444	 63.84	0	3993398..3993964	+	188	117617843	-	AHA_3556	-	hypothetical protein
3445	 65.65	0	3993969..3994658	+	229	117617516	-	AHA_3557	-	ABC transporter, ATP-binding protein
3446	 66.91	0	3994652..3995899	+	415	117620022	-	AHA_3558	-	peptide ABC transporter permease
3447	 63.75	0	3995929..3996408	+	159	117619206	-	AHA_3559	-	hypothetical protein
3448	 68.22	+1	3996641..3997414	+	257	117619833	-	AHA_3560	-	hypothetical protein
3449	 62.92	0	3997678..3999306	+	542	117618231	-	AHA_3561	-	aerotaxis receptor Aer
3450	 47.25	-2	4000360..4001250	+	296	117620636	-	AHA_3562	-	alpha/beta fold family hydrolase
3451	 38.64	-2	4001682..4003133	+	483	117619734	-	AHA_3563	-	hypothetical protein
3452	 61.28	0	4003214..4003807	-	197	117620177	cysC	AHA_3564	-	adenylylsulfate kinase
3453	 64.29	0	4003954..4005678	-	574	117618900	-	AHA_3565	-	divalent anion:sodium symporter family protein
3454	 62.04	0	4005683..4007110	-	475	117619351	-	AHA_3566	-	sulfate adenylyltransferase subunit 1
3455	 60.40	0	4007135..4008043	-	302	117619880	-	AHA_3567	-	sulfate adenylyltransferase subunit 2
3456	 66.31	0	4008152..4009564	-	470	117620289	-	AHA_3568	-	siroheme synthase
3457	 62.87	0	4009762..4010682	+	306	117618677	-	AHA_3569	-	membrane protease subunits
3458	 68.64	+1	4010679..4011134	+	151	117619384	-	AHA_3570	-	nodulation efficiency family protein
3459	 62.53	0	4011217..4011627	-	136	117619018	-	AHA_3571	-	CBS domain-containing protein
3460	 64.00	0	4011781..4013691	+	636	117619670	-	AHA_3572	-	ABC transporter, ATP-binding protein
3461	 66.89	0	4013702..4014145	+	147	117619435	-	AHA_3573	-	hypothetical protein
62.23	MEAN

5.38	STD DEV