Renibacterium salmoninarum ATCC 33209, complete genome NC_010168 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 163840488 Pathogen - hypothetical protein RSal33209_1743 1 None None None 163839416 Pathogen - tRNA pseudouridine synthase B RSal33209_0660 1 None None None 163841500 Common - acetyl-coenzyme A synthetase RSal33209_2766 183 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 163839536 Common - acetylornithine aminotransferase RSal33209_0780 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 163839785 Common - trypsin-like serine protease RSal33209_1037 16 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163839908 Common - hypothetical protein RSal33209_1161 12 None None None 163842036 Pathogen - hypothetical protein RSal33209_3315 1 None None None 163839174 Common - cysteinyl-tRNA synthetase RSal33209_0411 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163839832 Common - LSU ribosomal protein L19P RSal33209_1085 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 163840723 Common - hypothetical protein RSal33209_1981 12 None None None 163840149 Pathogen - metal-dependent hydrolase RSal33209_1403 1 None None None 163841351 Common - sulfate adenylyltransferase subunit 1 RSal33209_2617 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 163838857 Common - spectinomycin-efflux protein RSal33209_0092 134 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163842145 Common - hypothetical protein RSal33209_3427 9 None None None 163840201 Common - hypothetical protein RSal33209_1456 7 None None None 163839079 Common - ISRs2 transposase RSal33209_0314 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840602 Common - hypothetical protein RSal33209_1860 18 None None None 163840379 Common - IS994 RSal33209_1634 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840625 Common - amino acid permease RSal33209_1883 145 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 163840760 Common - acylamino-acid-releasing enzyme RSal33209_2018 122 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163840030 Common - methyltransferase, UbiE/COQ5 family RSal33209_1284 10 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163842040 Common - NADH:flavin oxidoreductase, Old Yellow Enzyme family RSal33209_3319 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 163839332 Common - putative helicase RSal33209_0574 24 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 163839671 Common - MFS transporter RSal33209_0919 99 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 163840338 Common - 2-isopropylmalate synthase RSal33209_1593 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 163840692 Common - glycerol-3-phosphate dehydrogenase RSal33209_1950 154 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 163839367 Pathogen - predicted cytoplasmic protein RSal33209_0610 1 None None None 163840224 Common - phosphohydrolase (MutT/nudix family protein) RSal33209_1479 43 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163840437 Common - siderophore biosynthesis protein, IucA/IucC family RSal33209_1692 26 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 163839403 Common - putative transcriptional regulator RSal33209_0647 12 COG1695 COG1695, Predicted transcriptional regulators Transcription 163839561 Common - hypothetical protein RSal33209_0808 18 None None None 163840718 Common - shikimate 5-dehydrogenase RSal33209_1976 210 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 163840055 Common dppB.2 dipeptide transport system permease protein RSal33209_1309 212 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840037 Common - hypothetical protein RSal33209_1291 8 None None None 163840962 Common - NAD/mycothiol-dependent formaldehyde dehydrogenase RSal33209_2222 206 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 163841232 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase RSal33209_2497 207 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 163839796 Pathogen - multidrug transporter, MFS family RSal33209_1049 1 None None None 163840843 Common - YbaK/prolyl-tRNA synthetase like protein RSal33209_2102 77 COG2606 EbsC, Uncharacterized conserved protein Function unknown 163838800 Pathogen - putative xylanase RSal33209_0034 1 None None None 163839516 Common - phenylalanyl-tRNA synthetase alpha chain RSal33209_0760 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 163838816 Common - two-component response regulator RSal33209_0050 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163840797 Common - glucan endo-1,3-beta-glucosidase RSal33209_2056 3 None None None 163838798 Pathogen - gamma-glutamyltranspeptidase RSal33209_0031 1 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 163839772 Common - luciferase-like monooxygenase RSal33209_1023 24 None None None 163839897 Common - IS994 RSal33209_1150 39 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841848 Common - hypothetical membrane spanning protein RSal33209_3121 7 COG4270 COG4270, Predicted membrane protein Function unknown 163839013 Common livH.1 branched-chain amino acid transport system permease protein RSal33209_0248 116 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 163840430 Common - hypothetical membrane protein RSal33209_1685 6 None None None 163838805 Common - mercuric reductase RSal33209_0039 239 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 163838917 Common - hypothetical protein RSal33209_0152 3 None None None 163839556 Common - adenine phosphoribosyltransferase RSal33209_0800 172 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 163841871 Common - phosphoenolpyruvate-protein phosphotransferase RSal33209_3144 232 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 163840906 Common - LSU ribosomal protein L3P RSal33209_2165 246 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 163840637 Common - hypothetical protein RSal33209_1895 3 None None None 163838991 Common - hypothetical membrane protein RSal33209_0226 34 COG3152 COG3152, Predicted membrane protein Function unknown 163839055 Common - predicted membrane lipoprotein RSal33209_0290 11 None None None 163841440 Common resB heme export protein RSal33209_2706 18 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 163839156 Common - IS994 RSal33209_0393 41 None None None 163840221 Common - Na(+)/H(+) antiporter RSal33209_1476 101 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 163841660 Common - hypothetical protein RSal33209_2929 2 None None None 163840414 Common - dipeptide-binding protein RSal33209_1669 6 None None None 163839060 Common - hypothetical membrane protein RSal33209_0295 5 None None None 163841861 Common - COBF protein RSal33209_3134 19 COG0400 COG0400, Predicted esterase General function prediction only 163839969 Common - ferrochelatase RSal33209_1222 60 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 163840318 Common - putative integral membrane protein RSal33209_1573 12 None None None 163841344 Common cysT sulfate transport system permease protein RSal33209_2610 149 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 163841828 Common - putative acetyltransferase RSal33209_3101 58 COG3153 COG3153, Predicted acetyltransferase General function prediction only 163841689 Common - transporter, MFS superfamily RSal33209_2958 130 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 163841690 Common - macrolide glycosyltransferase RSal33209_2959 30 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 163841204 Common - hypothetical protein RSal33209_2469 3 None None None 163841463 Common - exopolyphosphatase RSal33209_2729 163 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 163841766 Common - quinone oxidoreductase RSal33209_3036 137 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163841658 Common - transporter, LysE family RSal33209_2927 85 COG1279 COG1279, Lysine efflux permease General function prediction only 163839199 Common - FAD/FMN-containing dehydrogenase RSal33209_0439 177 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 163840612 Common - hypothetical protein RSal33209_1870 3 None None None 163841292 Common - 2,4-dienoyl-CoA reductase (NADPH) RSal33209_2557 34 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 163841457 Common - transcriptional regulator, ArsR family RSal33209_2723 143 COG0640 ArsR, Predicted transcriptional regulators Transcription 163841084 Common - GTP cyclohydrolase II RSal33209_2345 181 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 163839146 Pathogen - hypothetical protein RSal33209_0382 2 None None None 163841023 Common - ABC transporter ATP binding protein RSal33209_2283 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163838987 Common - hypothetical membrane protein RSal33209_0222 7 None None None 163839022 Common - ABC transporter ATP-binding protein RSal33209_0257 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 163841346 Common cysA.2 sulfate transport ATP-binding protein RSal33209_2612 248 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 163841486 Common - type II secretion system protein RSal33209_2752 4 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 163841388 Common - helix-turn-helix, Fis-type, AsnC family RSal33209_2654 161 COG1522 Lrp, Transcriptional regulators Transcription 163839479 Common recX.1 regulatory protein RSal33209_0723 11 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 163841623 Common - penicillin-binding protein RSal33209_2891 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 163842078 Common phnB.2 PhnB RSal33209_3359 5 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 163839165 Common - hypothetical membrane protein RSal33209_0402 7 None None None 163840575 Common - transcriptional regulator, TetR family RSal33209_1833 19 COG1309 AcrR, Transcriptional regulator Transcription 163841885 Pathogen - hypothetical protein RSal33209_3158 1 None None None 163841495 Pathogen - hypothetical protein RSal33209_2761 1 None None None 163839789 Common - dihydroxy-acid dehydratase RSal33209_1042 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 163841719 Common - UDP-N-acetylglucosamine pyrophosphorylase RSal33209_2988 226 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 163839886 Common - nitropropane dioxygenase RSal33209_1139 10 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 163839842 Common - SMF family protein RSal33209_1095 210 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 163840889 Common - LSU ribosomal protein L18P RSal33209_2148 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 163841984 Common - short chain dehydrogenase RSal33209_3259 236 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163839678 Common - nucleoside-diphosphate-sugar epimerase RSal33209_0928 27 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163841477 Common - hypothetical protein RSal33209_2743 2 COG2815 COG2815, Uncharacterized protein conserved in bacteria Function unknown 163840896 Common - molybdopterin dependent oxidoreductase RSal33209_2155 6 None None None 163841069 Common - glutamate synthase [NADPH] large chain RSal33209_2330 165 COG0067 GltB, Glutamate synthase domain 1 Amino acid transport and metabolism 163840993 Pathogen - hypothetical protein RSal33209_2253 1 None None None 163841775 Common phoH PhoH RSal33209_3045 199 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 163839230 Common - hypothetical protein RSal33209_0471 2 COG2966 COG2966, Uncharacterized conserved protein Function unknown 163841507 Common - hypothetical protein RSal33209_2773 32 COG5476 COG5476, Uncharacterized conserved protein Function unknown 163841316 Common - dehydrogenase RSal33209_2582 156 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163841450 Pathogen - hypothetical protein RSal33209_2716 1 None None None 163841333 Common - IS994 RSal33209_2599 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838992 Common - hypothetical protein RSal33209_0227 14 None None None 163841036 Common grpB dephospho-CoA kinase RSal33209_2296 204 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 163839604 Common - multidrug resistance protein RSal33209_0851 173 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841078 Common - hypothetical protein RSal33209_2339 15 None None None 163839986 Common - metal-dependent hydrolase RSal33209_1239 62 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 163838772 Common - 6-phosphogluconate dehydrogenase RSal33209_0003 180 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 163839962 Common moeB molybdopterin biosynthesis protein RSal33209_1215 214 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 163840347 Common - glycosyltransferase RSal33209_1602 8 None None None 163839008 Pathogen - hypothetical protein RSal33209_0243 1 None None None 163839620 Common - monooxygenase RSal33209_0868 9 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 163841651 Common - hypothetical membrane spanning protein RSal33209_2920 34 COG3752 COG3752, Predicted membrane protein Function unknown 163841811 Common malF MalF RSal33209_3081 185 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163839926 Common - hypothetical protein RSal33209_1179 14 None None None 163839272 Common - oxidoreductase, aldo/keto family RSal33209_0513 197 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163839459 Pathogen - hypothetical protein RSal33209_0703 1 None None None 163840865 Common ugpE SN-glycerol-3-phosphate transport system permease protein RSal33209_2124 158 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163842016 Common - acyl-CoA thioesterase RSal33209_3293 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 163839563 Common - hypothetical protein RSal33209_0810 2 None None None 163840468 Common - glycine cleavage system H protein RSal33209_1723 184 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 163838832 Common - transcriptional regulator, ArsR family RSal33209_0067 131 COG0640 ArsR, Predicted transcriptional regulators Transcription 163841740 Common - hypothetical protein RSal33209_3010 17 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 163839862 Common - type IV secretion protein RSal33209_1115 13 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 163842044 Common msrA peptide methionine sulfoxide reductase RSal33209_3323 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 163840960 Common - alpha/beta superfamily hydrolase RSal33209_2220 43 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163841166 Common - Ferredoxin--NAD(+) reductase RSal33209_2431 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 163840232 Common - hypothetical protein RSal33209_1487 7 None None None 163841600 Common - lipase/acylhydrolase with GDSL-like motif RSal33209_2867 16 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 163839466 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_0710 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839973 Common - luciferase-like monooxygenase RSal33209_1226 109 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 163842174 Common - hypothetical protein RSal33209_3456 6 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 163840532 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase RSal33209_1788 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 163839637 Common - putative DNA glycosidase RSal33209_0885 22 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 163840131 Common - anti-sigma factor, family RSal33209_1385 6 None None None 163841013 Common - hypothetical protein RSal33209_2273 46 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 163838951 Common - serpin (serine proteinase inhibitor) RSal33209_0186 27 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 163839132 Pathogen - hypothetical protein RSal33209_0368 1 None None None 163839694 Common - UDP-N-acetylenolpyruvoylglucosamine reductase RSal33209_0944 166 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 163839799 Common - ABC transporter permease protein RSal33209_1052 47 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 163841878 Common - beta-galactosidase RSal33209_3151 24 COG1874 LacA, Beta-galactosidase Carbohydrate transport and metabolism 163841222 Common - integral membrane protein RSal33209_2487 11 None None None 163839653 Common - secretory serine protease RSal33209_0901 20 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163840161 Common - intracellular protease, ThiJ/PfpI family RSal33209_1415 26 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 163840303 Common - aminoglycoside phosphotransferase RSal33209_1558 21 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 163840322 Common - ubiquinol-cytochrome C reductase cytochrome C subunit RSal33209_1577 18 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 163840246 Common - transporter, MFS superfamily RSal33209_1501 161 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840355 Common - hypothetical protein RSal33209_1610 6 None None None 163838939 Common - HTH transcriptional regulator RSal33209_0174 30 COG3800 COG3800, Predicted transcriptional regulator General function prediction only 163841071 Common - tryptophan synthase alpha chain RSal33209_2332 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 163841005 Pathogen - hypothetical protein RSal33209_2265 1 None None None 163839411 Common - DNA/RNA-binding protein RSal33209_0655 38 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 163840569 Common - phenol 2-monooxygenase RSal33209_1827 53 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163840784 Common - phosphoglycolate phosphatase RSal33209_2042 169 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 163842214 Common - GABA-specific permease RSal33209_3496 183 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 163841054 Common - short chain dehydrogenase RSal33209_2314 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163838906 Common - MFS transporter RSal33209_0141 3 None None None 163841852 Common - glycerophosphoryl diester phosphodiesterase RSal33209_3125 8 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 163841686 Common - hypothetical protein RSal33209_2955 75 COG0393 COG0393, Uncharacterized conserved protein Function unknown 163841754 Common - phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit RSal33209_3024 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 163842271 Common gidB methyltransferase RSal33209_3553 89 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 163839350 Common - IS994 RSal33209_0592 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840376 Common secA protein translocase, SecA subunit RSal33209_1631 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 163842244 Common - single-strand DNA binding protein RSal33209_3526 208 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 163840113 Pathogen - hypothetical protein RSal33209_1367 1 None None None 163840538 Common - hypothetical protein RSal33209_1794 10 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 163841816 Common - alpha-glucosidase RSal33209_3086 66 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163841963 Common - X-Pro dipeptidyl-peptidase (S15) family protein RSal33209_3237 16 COG2936 COG2936, Predicted acyl esterases General function prediction only 163842263 Common - tRNA nucleotidyltransferase RSal33209_3545 212 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 163842107 Common - auxin-induced protein PCNT115 RSal33209_3388 155 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163841427 Common - asparagine synthetase (glutamine-hydrolyzing) RSal33209_2693 27 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 163841893 Common - pseudomonapepsin precursor RSal33209_3166 27 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 163839427 Common - SSU ribosomal protein S15P RSal33209_0671 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 163838996 Common oppA.2 oligopeptide-binding protein RSal33209_0231 185 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163840404 Common - dipeptide transport ATP-binding protein RSal33209_1659 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 163839185 Common - trehalose/maltose-binding protein RSal33209_0422 15 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 163839315 Common - biotin synthase RSal33209_0557 180 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 163839336 Common - IS994 RSal33209_0578 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841128 Common - aconitate hydratase RSal33209_2393 218 COG1048 AcnA, Aconitase A Energy production and conversion 163839800 Common - ABC transporter ATP-binding protein RSal33209_1053 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 163842066 Common fepG.2 ferric enterobactin transport system permease protein RSal33209_3347 184 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 163839682 Common - secretory lipase RSal33209_0932 12 None None None 163840646 Common - transcriptional regulator, TetR family RSal33209_1904 62 COG1309 AcrR, Transcriptional regulator Transcription 163841544 Common - ABC transporter, ATP-binding protein RSal33209_2810 3 None None None 163841647 Pathogen - hypothetical protein RSal33209_2916 1 None None None 163840618 Common - hypothetical membrane protein RSal33209_1876 16 None None None 163840493 Common - ribosomal-protein-S5-alanine acetyltransferase RSal33209_1749 98 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163840835 Common - hypothetical protein RSal33209_2094 2 None None None 163841805 Common - hypothetical protein RSal33209_3075 5 None None None 163840412 Common dppB.5 dipeptide transport system permease protein RSal33209_1667 6 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840531 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase RSal33209_1787 136 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 163839633 Common - Mg(2+) transport ATPase protein C RSal33209_0881 92 COG1285 SapB, Uncharacterized membrane protein Function unknown 163840910 Common - permease transporter, MFS family RSal33209_2169 16 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841207 Common - methionine aminopeptidase RSal33209_2472 247 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 163840049 Common - carboxypeptidase G2 precursor RSal33209_1303 25 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163840506 Common - glycerol-3-phosphate dehydrogenase RSal33209_1762 120 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 163842194 Common - hypothetical protein RSal33209_3476 6 COG0400 COG0400, Predicted esterase General function prediction only 163839048 Pathogen - hypothetical protein RSal33209_0283 1 None None None 163842083 Common - alpha-L-fucosidase RSal33209_3364 19 COG3669 COG3669, Alpha-L-fucosidase Carbohydrate transport and metabolism 163838931 Common - FAD-dependent monooxygenase RSal33209_0166 48 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163840556 Common - oxoglutarate semialdehyde dehydrogenase RSal33209_1814 184 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163839451 Common - molybdopterin biosynthesis enzyme RSal33209_0695 104 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 163839443 Common - two-component response regulator RSal33209_0687 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163841062 Common - dipeptide-binding protein RSal33209_2322 178 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163840122 Common mntH manganese transport protein RSal33209_1376 106 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 163841032 Pathogen - hypothetical protein RSal33209_2292 1 None None None 163839689 Common - predicted transcriptional regulator, TetR family RSal33209_0939 24 COG1309 AcrR, Transcriptional regulator Transcription 163842164 Common - IS994 RSal33209_3446 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841938 Common - dihydroneopterin aldolase RSal33209_3212 130 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 163838885 Common - hypothetical protein RSal33209_0120 15 COG4289 COG4289, Uncharacterized protein conserved in bacteria Function unknown 163841401 Common - transcriptional regulator, PadR family RSal33209_2667 53 COG1695 COG1695, Predicted transcriptional regulators Transcription 163840177 Common - transcription termination factor Rho RSal33209_1432 207 COG1158 Rho, Transcription termination factor Transcription 163841568 Pathogen - hypothetical protein RSal33209_2835 1 None None None 163841100 Common - transcriptional regulator, TetR family RSal33209_2365 26 COG1309 AcrR, Transcriptional regulator Transcription 163839485 Common - L-asparagine permease RSal33209_0729 175 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 163840813 Common - 3-ketoacyl-CoA thiolase RSal33209_2072 171 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163838789 Common - FAD/FMN-containing dehydrogenase RSal33209_0022 39 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 163841597 Common - Fe3+-siderophore binding protein RSal33209_2864 48 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 163841372 Common ubiE menaquinone biosynthesis methyltransferase RSal33209_2638 227 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163839820 Common - glucose-6-phosphate 1-dehydrogenase RSal33209_1073 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 163841976 Common - hydroxymethylpyrimidine kinase RSal33209_3251 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 163839656 Common - hypothetical protein RSal33209_0904 6 None None None 163841714 Common - cysteine desulfurase RSal33209_2983 237 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 163840776 Common - putative proteasome component superfamily RSal33209_2034 16 None None None 163842231 Pathogen - hypothetical protein RSal33209_3513 1 None None None 163840074 Common - sialidase RSal33209_1328 8 None None None 163839766 Common - ABC transporter sugar permease RSal33209_1017 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841178 Common - lipoic acid synthetase RSal33209_2443 191 COG0320 LipA, Lipoate synthase Coenzyme metabolism 163840526 Common - ATP-dependent DNA helicase RSal33209_1782 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 163841183 Common - IS994 RSal33209_2448 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839489 Common - LexA repressor RSal33209_0733 172 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 163840658 Common - hypothetical protein RSal33209_1916 2 None None None 163838880 Common - ABC-type sugar transport system, permease component RSal33209_0115 128 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163839126 Common iolD.2 IolD RSal33209_0362 80 COG3962 COG3962, Acetolactate synthase Amino acid transport and metabolism 163839512 Common - IS994 RSal33209_0756 41 None None None 163839945 Common - PHP domain containing protein (TRPH) RSal33209_1198 120 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 163838830 Common - hypothetical protein RSal33209_0064 4 None None None 163839930 Common - glutamate-binding protein RSal33209_1183 176 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163842216 Pathogen - hypothetical protein RSal33209_3498 1 None None None 163841265 Common - hypothetical signal transduction protein RSal33209_2530 56 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 163841981 Common - hypothetical membrane spanning protein RSal33209_3256 5 None None None 163842098 Common - A3(2) glycogen metabolism cluster I RSal33209_3379 12 COG4762 COG4762, Uncharacterized protein conserved in bacteria Function unknown 163840507 Common - glycerol-3-phosphate dehydrogenase RSal33209_1763 128 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 163840837 Common - phosphoserine phosphatase RSal33209_2096 151 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 163840727 Common - ATPase, AAA family RSal33209_1985 215 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 163840807 Common - cytochrome P450 superfamily RSal33209_2066 64 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 163840005 Common - deoxyribodipyrimidine photolyase RSal33209_1259 131 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 163839354 Common - sugar operon repressor RSal33209_0596 117 COG1609 PurR, Transcriptional regulators Transcription 163840193 Common - ATP synthase beta chain RSal33209_1448 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 163841998 Common - ribose 5-phosphate isomerase RSal33209_3275 127 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 163839852 Pathogen - hypothetical protein RSal33209_1105 1 None None None 163841535 Common nocE NocE, putative RSal33209_2801 75 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 163840256 Common - pyruvate dehydrogenase E1 component beta subunit RSal33209_1511 218 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 163841148 Common - acetyl-CoA synthetase RSal33209_2413 146 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 163839406 Common - antibiotic resistance kinase RSal33209_0650 8 COG3570 StrB, Streptomycin 6-kinase Defense mechanisms 163839712 Pathogen - hypothetical membrane protein RSal33209_0962 1 None None None 163839506 Common - putative efflux protein RSal33209_0750 176 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163842133 Common - N-acetylglucosamine kinase RSal33209_3414 20 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 163840802 Common - putative Iron(III) dicitrate-binding protein RSal33209_2061 48 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 163841611 Common - IS994 RSal33209_2878 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841197 Common - glutamate-ammonia-ligase adenylyltransferase RSal33209_2462 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 163838898 Common - Transposase RSal33209_0133 8 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840691 Common - glycerol uptake facilitator protein RSal33209_1949 100 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 163842204 Common - hypothetical cytosolic protein RSal33209_3486 17 None None None 163841557 Common - hypothetical protein RSal33209_2824 5 None None None 163839083 Common - nucleoside transport system permease protein RSal33209_0318 4 None None None 163840395 Common clpP.1 ATP-dependent endopeptidase clp proteolytic subunit RSal33209_1650 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 163840278 Common - phosphonates-binding protein RSal33209_1533 22 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 163839495 Common - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RSal33209_0739 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 163838946 Common - enoyl-CoA hydratase RSal33209_0181 183 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 163841224 Common - hypothetical cytosolic protein RSal33209_2489 192 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 163839595 Common - hypothetical protein RSal33209_0842 3 None None None 163840924 Common - transcriptional regulator, ArsR family RSal33209_2183 153 COG0640 ArsR, Predicted transcriptional regulators Transcription 163839091 Common - DedA family protein RSal33209_0326 34 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 163841377 Common - 2-oxoglutarate decarboxylase RSal33209_2643 142 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 163840118 Pathogen - hypothetical membrane protein RSal33209_1372 1 None None None 163841912 Common - transcriptional regulator, TetR family RSal33209_3186 20 COG1309 AcrR, Transcriptional regulator Transcription 163840134 Pathogen - hypothetical protein RSal33209_1388 1 COG4758 COG4758, Predicted membrane protein Function unknown 163841991 Common clpX ATP-dependent endopeptidase clp ATP-binding subunit RSal33209_3266 221 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 163839817 Common - ammonium transporter RSal33209_1070 93 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 163840435 Common - siderophore biosynthesis protein, IucA/IucC family RSal33209_1690 49 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 163839382 Pathogen - hypothetical membrane protein RSal33209_0626 1 None None None 163839622 Common - transcriptional regulator, TetR family RSal33209_0870 20 None None None 163841415 Common - 2-hydroxyphenylacetyl-CoA ring opening enzyme RSal33209_2681 211 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163842227 Common - transcriptional regulator, TetR family RSal33209_3509 34 COG1309 AcrR, Transcriptional regulator Transcription 163841193 Pathogen - hypothetical cytosolic protein RSal33209_2458 1 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 163841397 Common - nucleoside-diphosphate-sugar epimerase RSal33209_2663 3 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163841076 Common - anthranilate synthase component I RSal33209_2337 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 163838975 Common blaB beta-lactamase regulatory protein RSal33209_0210 24 COG2367 PenP, Beta-lactamase class A Defense mechanisms 163841561 Common - hypothetical protein RSal33209_2828 5 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 163841785 Common - galactose-1-phosphate uridylyltransferase RSal33209_3055 78 COG1085 GalT, Galactose-1-phosphate uridylyltransferase Energy production and conversion 163839190 Common - trehalose synthase RSal33209_0427 80 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163841113 Common - HIT family hydrolase RSal33209_2378 9 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 163841590 Common - multidrug resistance protein B RSal33209_2857 141 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 163840680 Common - competence protein RSal33209_1938 47 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 163841107 Common - thiosulfate sulfurtransferase RSal33209_2372 144 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 163838924 Common - sugar isomerase/epimerase RSal33209_0159 25 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163839119 Common - multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein RSal33209_0355 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163838778 Pathogen - hypothetical protein RSal33209_0010 1 None None None 163841923 Pathogen - hypothetical protein RSal33209_3197 1 None None None 163839909 Pathogen - hypothetical protein RSal33209_1162 1 None None None 163841682 Common - propionyl-CoA carboxylase carboxyltransferase subunit RSal33209_2951 212 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 163839306 Common - dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex RSal33209_0548 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 163839579 Common - 2-methylcitrate dehydratase RSal33209_0826 81 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 163839104 Pathogen - hypothetical protein RSal33209_0339 1 None None None 163840316 Common sigL RNA polymerase sigma factor RSal33209_1571 125 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 163842187 Common - sensor transduction protein kinase RSal33209_3469 40 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163840324 Common - menaquinol-cytochrome c reductase cytochrome b subunit RSal33209_1579 147 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 163840583 Common igiB.2 IgiB RSal33209_1841 20 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 163841675 Common - IS994 RSal33209_2944 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840029 Common - methyltransferase, UbiE/COQ5 family RSal33209_1283 23 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163840703 Common - hypothetical protein RSal33209_1961 9 None None None 163840883 Common - acyl-CoA dehydrogenase, long-chain specific RSal33209_2142 161 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163841028 Common - acetyltransferase (GNAT) family RSal33209_2288 64 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 163841214 Common - histidinol dehydrogenase RSal33209_2479 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 163839144 Common - two-component response regulator RSal33209_0380 187 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163842023 Common - hypothetical cytosolic protein RSal33209_3301 14 COG4815 COG4815, Uncharacterized protein conserved in bacteria Function unknown 163841825 Common - 3-oxoacyl-[acyl-carrier-protein] synthase RSal33209_3095 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163838963 Common - drug resistance transporter EmrB/QacA subfamily RSal33209_0198 191 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840470 Common - L-serine dehydratase RSal33209_1725 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 163840077 Common - putative glucokinase RSal33209_1331 110 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163839291 Common - phosphatidate cytidylyltransferase RSal33209_0533 214 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 163841176 Common - hypothetical protein RSal33209_2441 84 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 163841749 Common - hypothetical protein RSal33209_3019 13 None None None 163839010 Common - isocitrate dehydrogenase (NADP) RSal33209_0245 70 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 163840687 Common - amino acid permease RSal33209_1945 18 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 163841169 Pathogen - hypothetical protein RSal33209_2434 1 None None None 163840208 Common - glucosamine-6-phosphate isomerase RSal33209_1463 86 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 163840015 Common - efflux ABC transporter, permease protein RSal33209_1269 7 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 163839981 Common - ATP-dependent DNA helicase RSal33209_1234 104 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 163840666 Common - coserved hypothetical protein RSal33209_1924 7 COG5401 COG5401, Spore germination protein General function prediction only 163839073 Common - dehydrogenase RSal33209_0308 152 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163839916 Common - GTP-binding protein RSal33209_1169 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 163839977 Common - ABC transporter permease protein RSal33209_1230 106 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 163840261 Common - ADP-ribose pyrophosphatase (MutT/nudix family) RSal33209_1516 75 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163840312 Common - xylose isomerase TIM barrel domain, putative DNA-binding protein RSal33209_1567 42 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163840600 Common - phosphoribosylamine--glycine ligase RSal33209_1858 232 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 163839750 Common - hypothetical protein RSal33209_1001 2 None None None 163838792 Common - secretory serine protease RSal33209_0025 15 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163839056 Common - hypothetical membrane protein RSal33209_0291 2 None None None 163839879 Common - transcriptional regulator, AsnC family RSal33209_1132 106 COG1522 Lrp, Transcriptional regulators Transcription 163840024 Common tipA.1 transcriptional activator RSal33209_1278 7 None None None 163842250 Common - dipeptide transport system permease protein RSal33209_3532 215 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163839663 Common - potassium-transporting ATPase A chain RSal33209_0911 92 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 163839385 Common - adenylosuccinate lyase RSal33209_0629 232 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 163840661 Common era GTP-binding protein RSal33209_1919 221 COG1159 Era, GTPase General function prediction only 163838954 Common - IS994 RSal33209_0189 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841900 Common pstA phosphate transport system permease protein RSal33209_3174 226 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 163840733 Pathogen - hypothetical protein RSal33209_1991 1 None None None 163840388 Common - hypothetical membrane protein RSal33209_1643 6 None None None 163840935 Common - putative esterase RSal33209_2194 3 None None None 163839664 Common - potassium-transporting ATPase A chain RSal33209_0912 95 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 163842115 Common - peptidase RSal33209_3396 14 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 163838982 Common - protein CDC27Hs RSal33209_0217 14 None None None 163839255 Common - phosphoserine aminotransferase RSal33209_0496 84 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 163840366 Common whmD cell division transcription factor RSal33209_1621 19 None None None 163841584 Common - alcohol dehydrogenase RSal33209_2851 124 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 163839649 Common - cystathionine gamma-lyase RSal33209_0897 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 163839342 Common - sorbitol/mannitol transport inner membrane protein RSal33209_0584 120 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163839439 Pathogen - hypothetical protein RSal33209_0683 1 None None None 163840250 Common - dihydrodipicolinate synthase RSal33209_1505 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 163839163 Common - cystathionine gamma-synthase RSal33209_0400 198 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 163841723 Common - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase RSal33209_2993 127 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 163839586 Common - D-aminoacylase RSal33209_0833 45 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 163840560 Common - proline racemase RSal33209_1818 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 163839216 Common tetA.1 tetracycline resistance protein RSal33209_0457 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163840332 Common - membrane spanning protein RSal33209_1587 19 None None None 163839239 Common - hypothetical protein RSal33209_0480 5 None None None 163839245 Common - two-component response regulator RSal33209_0486 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163840083 Common - IS994 RSal33209_1337 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840542 Common - putative serine/threonine protein kinase RSal33209_1800 62 COG2815 COG2815, Uncharacterized protein conserved in bacteria Function unknown 163839172 Common - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RSal33209_0409 195 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 163840098 Pathogen - hypothetical protein RSal33209_1352 1 None None None 163842199 Common - glutaredoxin RSal33209_3481 34 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 163841919 Common - hypothetical membrane spanning protein RSal33209_3193 34 COG3548 COG3548, Predicted integral membrane protein Function unknown 163839591 Common - IS994 RSal33209_0838 39 None None None 163841284 Common hmuU.2 hemin transport system permease protein RSal33209_2549 176 COG4139 BtuC, ABC-type cobalamin transport system, permease component Coenzyme metabolism 163841866 Common - chitosanase RSal33209_3139 4 None None None 163839640 Common - peptidase M20D, amidohydrolase RSal33209_0888 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 163841745 Common - hypothetical protein RSal33209_3015 7 None None None 163842009 Common - general stress protein 17O RSal33209_3286 41 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 163839844 Common - integrase, XerC/XerD family RSal33209_1097 223 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 163838919 Common - hypothetical membrane protein RSal33209_0154 52 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 163842209 Pathogen - acetyltransferase, gnat family RSal33209_3491 1 COG3153 COG3153, Predicted acetyltransferase General function prediction only 163840442 Common - ribosomal-protein-S18-alanine acetyltransferase RSal33209_1697 67 COG0456 RimI, Acetyltransferases General function prediction only 163838827 Common - transcriptional regulator, AraC family RSal33209_0061 51 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 163841672 Common - myo-inositol-1(or 4)-monophosphatase RSal33209_2941 188 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 163839719 Common glnR.2 transcriptional regulatory protein RSal33209_0969 19 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163839705 Common - putative delta fatty acid desaturase RSal33209_0955 35 COG3239 DesA, Fatty acid desaturase Lipid metabolism 163840746 Common - asparagine synthetase (glutamine-hydrolyzing) RSal33209_2004 171 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 163842052 Common - IS994 RSal33209_3332 39 None None None 163840874 Common - sterol carrier protein X RSal33209_2133 139 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163841493 Common - CoA pyrophosphatase RSal33209_2759 102 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163839769 Pathogen - siderophore-interacting protein RSal33209_1020 1 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 163841697 Common - deoxyribose-phosphate aldolase RSal33209_2966 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 163840180 Common - Sua5/YciO/YrdC/YwlC family protein RSal33209_1435 174 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 163840479 Common - large conductance mechanosensitive channel protein RSal33209_1734 143 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 163839528 Common - non-ribosomal peptide synthetase RSal33209_0772 169 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163841303 Common - tetracycline repressor protein class C# RSal33209_2569 20 COG1309 AcrR, Transcriptional regulator Transcription 163839940 Common - hypothetical membrane protein RSal33209_1193 6 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 163842114 Common - peptidase RSal33209_3395 5 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 163839534 Common argJ arginine biosynthesis bifunctional protein RSal33209_0778 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 163840354 Common - glycosyltransferase RSal33209_1609 176 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 163841093 Common - peptide deformylase RSal33209_2354 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 163840785 Common - hypothetical protein RSal33209_2043 21 COG1938 COG1938, Archaeal enzymes of ATP-grasp superfamily General function prediction only 163841488 Common - type II secretion system protein E RSal33209_2754 143 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 163840154 Common - alcohol dehydrogenase (NADP+) RSal33209_1408 195 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 163839379 Common - ABC transporter ATP-binding protein RSal33209_0623 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 163839345 Common - sorbitol/mannitol transport inner membrane protein RSal33209_0587 42 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840597 Common - transcriptional regulator, AraC family RSal33209_1855 48 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 163840420 Common - sugar transporter RSal33209_1675 111 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 163839540 Common - argininosuccinate lyase RSal33209_0784 217 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 163838989 Common - GDP-mannose:alpha-D-mannosyl-phosphatidyl-myo-inositol alpha-1,6-mannosyltransferase RSal33209_0224 3 None None None 163840059 Common dppF.1 dipeptide transport ATP-binding protein RSal33209_1313 245 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 163840427 Common fepG.1 ferric enterobactin transport system permease protein RSal33209_1682 96 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 163841438 Common - membrane protein RSal33209_2704 7 None None None 163842220 Common - queuine tRNA-ribosyltransferase RSal33209_3502 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 163841119 Common - acetyl-CoA acetyltransferase RSal33209_2384 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163841550 Common - peptidase RSal33209_2817 6 None None None 163839000 Common - glucokinase regulatory protein RSal33209_0235 75 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 163841846 Common - IS994 RSal33209_3119 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839568 Common - CTP synthase RSal33209_0815 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 163839038 Common - PEP phosphonomutase RSal33209_0273 61 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 163841732 Common - decaprenyl-phosphate-mannose--protein mannosyltransferase RSal33209_3002 38 COG1928 PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase Posttranslational modification, protein turnover, chaperones 163839250 Common - DNA/RNA helicase (DEAD/DEAH box family) RSal33209_0491 15 None None None 163841276 Common - putative acyl carrier protein RSal33209_2541 4 None None None 163841836 Common - hypothetical protein RSal33209_3109 3 None None None 163839229 Common - stress protein, Gls24 family RSal33209_0470 35 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 163841244 Common - dimethylallyltransferase RSal33209_2509 167 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 163840968 Common - transporter, auxin domain RSal33209_2228 7 None None None 163840860 Common - SSU ribosomal protein S13P RSal33209_2119 247 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 163839361 Common - transcriptional regulator, GntR family RSal33209_0603 123 COG2186 FadR, Transcriptional regulators Transcription 163839265 Common moeA.1 molybdopterin biosynthesis MoeA protein RSal33209_0506 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 163840407 Common dppC.3 dipeptide transport system permease protein RSal33209_1662 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163839572 Common - NUDIX hydrolase RSal33209_0819 5 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163842020 Common - transporter, MFS superfamily RSal33209_3297 79 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163839703 Common - hypothetical protein RSal33209_0953 16 None None None 163841768 Pathogen - hypothetical protein RSal33209_3038 1 None None None 163840189 Common - ATP synthase B chain RSal33209_1444 27 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 163841617 Common - hypothetical protein RSal33209_2884 12 None None None 163838947 Common - glutarate-CoA ligase RSal33209_0182 14 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 163841465 Common - aminopeptidase C RSal33209_2731 11 COG3579 PepC, Aminopeptidase C Amino acid transport and metabolism 163840880 Common - AMP-dependent synthetase and ligase RSal33209_2139 63 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163840683 Common - proline dehydrogenase RSal33209_1941 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163839045 Common - hypothetical protein RSal33209_0280 13 None None None 163841797 Common - disaccharide transport system permease protein RSal33209_3067 4 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163841151 Common - quaternary ammonium compound-resistance protein RSal33209_2416 146 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 163841876 Common - proline/betaine transporter RSal33209_3149 125 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840677 Common - carboxylesterase type B RSal33209_1935 52 COG2272 PnbA, Carboxylesterase type B Lipid metabolism 163841965 Common - alpha-ribazole-5'-phosphate phosphatase RSal33209_3240 156 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 163839212 Common - MFS superfamily transporter RSal33209_0453 111 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163842154 Common - short chain dehydrogenase RSal33209_3436 186 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839445 Common - oxidoreductase, molybdopterin-binding RSal33209_0689 113 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 163839767 Common - Zn-dependant hydrolase, beta-lactamase family RSal33209_1018 98 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 163840564 Common - hypothetical protein RSal33209_1822 18 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 163840614 Common - hypothetical protein RSal33209_1872 2 None None None 163841456 Common - L-lactate dehydrogenase RSal33209_2722 110 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 163841699 Common - glutathione reductase RSal33209_2968 222 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 163839148 Pathogen - hypothetical protein RSal33209_0384 1 None None None 163838848 Pathogen - 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_0083 1 None None None 163840573 Pathogen - hypothetical protein RSal33209_1831 1 None None None 163841335 Common rarD chloramphenicol-sensitive protein RSal33209_2601 92 COG2962 RarD, Predicted permeases General function prediction only 163841429 Common - hypothetical cytosolic protein RSal33209_2695 14 None None None 163841384 Common - metallo-beta-lactamase superfamily, putative RSal33209_2650 51 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 163840513 Common - 10 kDa chaperonin GroES RSal33209_1769 214 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 163838874 Common - transcriptional regulator, LacI family RSal33209_0109 128 COG1609 PurR, Transcriptional regulators Transcription 163839920 Common - hydroxymethylpyrimidine kinase RSal33209_1173 212 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 163839903 Common - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RSal33209_1156 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 163839739 Common - acetyltransferase RSal33209_0990 33 COG0456 RimI, Acetyltransferases General function prediction only 163841082 Common hisI phosphoribosyl-ATP pyrophosphatase RSal33209_2343 20 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 163841946 Common tilS tRNA(Ile)-lysidine synthetase RSal33209_3220 196 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 163841089 Common - epoxide hydrolase RSal33209_2350 47 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163841645 Common - ABC transporter permease protein RSal33209_2914 10 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 163839542 Common - hypothetical protein RSal33209_0786 6 None None None 163839552 Common - DNA methylation and regulatory protein ADA RSal33209_0796 80 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 163842147 Pathogen - hypothetical protein RSal33209_3429 1 None None None 163839380 Pathogen - hypothetical protein RSal33209_0624 1 None None None 163841111 Common - hypothetical protein RSal33209_2376 5 None None None 163842165 Common - IS994 RSal33209_3447 39 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841843 Common - hypothetical protein RSal33209_3116 29 COG0011 COG0011, Uncharacterized conserved protein Function unknown 163841883 Common - O6-methylguanine-DNA methyltransferase RSal33209_3156 213 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 163841386 Common - pyruvate dehydrogenase E1 component beta subunit RSal33209_2652 210 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 163842127 Common - alpha-glucosidase RSal33209_3408 81 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 163838940 Common - putative protease RSal33209_0175 2 None None None 163839154 Common - IS994 RSal33209_0391 33 None None None 163841038 Common - hypothetical protein RSal33209_2298 2 None None None 163840609 Common - RNA polymerase sigma factor RSal33209_1867 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 163841314 Common - hypothetical membrane spanning protein RSal33209_2580 17 COG5650 COG5650, Predicted integral membrane protein Function unknown 163840877 Common - IS994 RSal33209_2136 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840391 Common - hypothetical protein RSal33209_1646 10 None None None 163840894 Common - LSU ribosomal protein L14P RSal33209_2153 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 163839787 Common - polynucleotide kinase RSal33209_1039 6 None None None 163841662 Common - glycyl-tRNA synthetase RSal33209_2931 86 COG0423 GRS1, Glycyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 163841970 Common - gamma-glutamyl phosphate reductase RSal33209_3245 191 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 163839304 Common - pyruvate dehydrogenase E1 component alpha subunit RSal33209_0546 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 163839840 Common - IS994 RSal33209_1093 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840028 Common - methyltransferase, UbiE/COQ5 family RSal33209_1282 8 None None None 163840639 Common - glycine betaine transport system permease protein RSal33209_1897 126 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 163840994 Common secG preprotein translocase RSal33209_2254 3 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 163839077 Common - zinc-binding dehydrogenase RSal33209_0312 111 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 163842049 Common - hypothetical membrane spanning protein RSal33209_3328 6 None None None 163840369 Common - hypothetical protein RSal33209_1624 42 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163840641 Common - glycine betaine transport system permease protein RSal33209_1899 148 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 163841572 Pathogen - lipoprotein, putative RSal33209_2839 1 None None None 163841136 Common trkA Trk system potassium uptake protein RSal33209_2401 115 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 163839334 Common - aminotransferase class I family RSal33209_0576 229 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 163841484 Common tadE TadE family protein RSal33209_2750 2 None None None 163838803 Common - beta-galactosidase RSal33209_0037 46 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 163838887 Common - hypothetical protein RSal33209_0122 7 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163842085 Common - alpha-L-fucosidase RSal33209_3366 13 COG3669 COG3669, Alpha-L-fucosidase Carbohydrate transport and metabolism 163841149 Common - DNA gyrase subunit A RSal33209_2414 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 163838962 Common - transcriptional regulator, MarR family RSal33209_0197 29 COG1846 MarR, Transcriptional regulators Transcription 163840400 Common - chorismate mutase RSal33209_1655 57 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 163840830 Common - translation initiation inhibitor RSal33209_2089 8 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 163840694 Common - 2,5-diketo-D-gluconic acid reductase RSal33209_1952 173 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 163841621 Common - protein phosphatase 2C RSal33209_2889 133 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 163839834 Common - signal peptidase I RSal33209_1087 158 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 163839338 Common - cation-transporting ATPase, E1-E2 family RSal33209_0580 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 163841628 Common - putative integral membrane protein RSal33209_2896 23 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 163840870 Common - glutaryl-CoA dehydrogenase RSal33209_2129 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163841838 Common - D-beta-hydroxybutyrate dehydrogenase RSal33209_3111 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163842181 Common - long-chain-fatty-acid--CoA ligase RSal33209_3463 208 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841370 Common - geranylgeranyl reductase RSal33209_2636 11 None None None 163839993 Pathogen - hypothetical protein RSal33209_1247 1 None None None 163841581 Common - cystathionine beta-lyase RSal33209_2848 220 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 163841790 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_3060 133 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839921 Common - aminotransferase fusion protein RSal33209_1174 226 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 163840655 Common - extracellular solute-binding protein, family 5, putative RSal33209_1913 198 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163841511 Common - putative sugar transporter integral membrane protein RSal33209_2777 151 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840339 Common - metallopeptidase, M13 family RSal33209_1594 63 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 163841358 Common - IS994 RSal33209_2624 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841442 Common tlpA thiol:disulfide interchange protein RSal33209_2708 77 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 163838818 Common - hypothetical protein RSal33209_0052 14 None None None 163842136 Common - transcriptional regulator, TetR family RSal33209_3417 52 COG1309 AcrR, Transcriptional regulator Transcription 163841988 Common - hypothetical protein RSal33209_3263 16 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 163841555 Common - DNA-binding protein HU RSal33209_2822 182 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 163839895 Common - aspartate/alanine aminotransferase RSal33209_1148 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 163840631 Common - tRNA (m(7)G46) methyltransferase RSal33209_1889 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 163840845 Pathogen - hypothetical protein RSal33209_2104 1 None None None 163841725 Common - hypothetical secreted protein RSal33209_2995 25 COG3583 COG3583, Uncharacterized protein conserved in bacteria Function unknown 163840730 Common - acetyltransferase, GNAT family RSal33209_1988 15 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 163840360 Common - ABC-type polysaccharide/polyol phosphate transport system, ATPase component RSal33209_1615 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 163839565 Common - ATP-NAD kinase RSal33209_0812 240 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 163839651 Pathogen - hypothetical protein RSal33209_0899 1 None None None 163841759 Pathogen - hypothetical protein RSal33209_3029 1 None None None 163839554 Common - DNA-3-methyladenine glycosylase II RSal33209_0798 80 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 163839531 Pathogen - hypothetical membrane protein RSal33209_0775 1 None None None 163841977 Common - ribonuclease E RSal33209_3252 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 163841874 Common - ribosomal-protein-alanine acetyltransferase RSal33209_3147 92 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163840761 Common - 23S rRNA m(1)G 745 methyltransferase RSal33209_2019 57 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163841307 Pathogen - hypothetical protein RSal33209_2573 1 None None None 163841279 Common - putative hydrolase RSal33209_2544 95 COG2267 PldB, Lysophospholipase Lipid metabolism 163840451 Common - sugar transport system permease RSal33209_1706 142 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840626 Pathogen - hypothetical protein RSal33209_1884 1 None None None 163841605 Pathogen - hypothetical protein RSal33209_2872 1 None None None 163840867 Common - glycerol-3-phosphate-binding protein RSal33209_2126 26 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163841632 Pathogen - citrate synthase RSal33209_2900 1 COG0372 GltA, Citrate synthase Energy production and conversion 163840163 Common - hypothetical protein RSal33209_1417 6 None None None 163840944 Common - lpxtg-motif cell wall anchor domain RSal33209_2203 5 None None None 163839723 Common - pyrophosphate--fructose 6-phosphate 1-phosphotransferase RSal33209_0973 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 163840536 Common - hypothetical protein RSal33209_1792 4 COG3152 COG3152, Predicted membrane protein Function unknown 163841761 Common - carbonic anhydrase RSal33209_3031 151 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 163840912 Common - translation elongation factor Tu RSal33209_2171 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 163841684 Common - hypothetical cytosolic protein RSal33209_2953 43 COG4805 COG4805, Uncharacterized protein conserved in bacteria Function unknown 163839864 Common traA.1 conjugal transfer protein RSal33209_1117 20 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 163841126 Common - hypothetical protein RSal33209_2391 5 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 163840490 Common - glyoxalase family protein RSal33209_1746 40 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 163840040 Pathogen - hypothetical protein RSal33209_1294 1 None None None 163840981 Common - penicillin-binding protein, transpeptidase RSal33209_2241 154 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 163842076 Common recR recombination protein RSal33209_3357 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 163841098 Common - hypothetical protein RSal33209_2363 5 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 163839756 Common - hypothetical protein RSal33209_1007 3 None None None 163841627 Common - hypothetical protein RSal33209_2895 2 None None None 163841230 Common ftsW.1 cell division protein RSal33209_2495 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 163842081 Common - hypothetical cytosolic protein RSal33209_3362 4 COG3254 COG3254, Uncharacterized conserved protein Function unknown 163840129 Common - hypothetical protein RSal33209_1383 12 COG2259 COG2259, Predicted membrane protein Function unknown 163839024 Pathogen - hypothetical protein RSal33209_0259 1 None None None 163839046 Common - hypothetical protein RSal33209_0281 13 None None None 163841473 Common - transcriptional regulator, ArsR family protein RSal33209_2739 2 COG2345 COG2345, Predicted transcriptional regulator Transcription 163840378 Common - IS994 RSal33209_1633 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842096 Pathogen - hypothetical protein RSal33209_3377 1 None None None 163840085 Common - glycosyl transferase, group 1 RSal33209_1339 86 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163840190 Common - ATP synthase delta chain RSal33209_1445 23 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 163840234 Common - IS994 RSal33209_1489 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840096 Common - tyrosine phenol-lyase RSal33209_1350 4 None None None 163839183 Common - glycogen phosphorylase RSal33209_0420 150 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 163840463 Common - hypothetical protein RSal33209_1718 40 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163840372 Common - hypothetical protein RSal33209_1627 2 None None None 163840288 Common - putative esterase RSal33209_1543 12 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163838914 Common - transcriptional regulator, ROK family RSal33209_0149 154 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163839684 Common - glyoxalase family protein RSal33209_0934 20 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 163841833 Common - putative mini-circle protein RSal33209_3106 12 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 163841716 Common - peptidyl-tRNA hydrolase RSal33209_2985 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 163841034 Pathogen - hypothetical protein RSal33209_2294 1 None None None 163839618 Common - hypothetical membrane protein RSal33209_0866 2 None None None 163839783 Common - transcriptional regulator, MarR family RSal33209_1035 21 COG1846 MarR, Transcriptional regulators Transcription 163838843 Common - formamidopyrimidine-DNA glycosylase RSal33209_0078 157 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 163840486 Common - IS994 RSal33209_1741 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841064 Common - NADH-dependent flavin oxidoreductase RSal33209_2324 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 163840921 Common - phosphatase RSal33209_2180 19 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 163840495 Common - 5-formyltetrahydrofolate cyclo-ligase RSal33209_1751 135 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 163841823 Common - 3-oxoacyl-[acyl-carrier-protein] synthase RSal33209_3093 26 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841931 Common - ribokinase RSal33209_3205 141 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163840621 Common - hypothetical membrane protein RSal33209_1879 43 COG3304 COG3304, Predicted membrane protein Function unknown 163840648 Common hspR putative heat shock protein RSal33209_1906 79 COG0789 SoxR, Predicted transcriptional regulators Transcription 163841411 Pathogen - hypothetical protein RSal33209_2677 1 None None None 163840410 Common - IS994 RSal33209_1665 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841986 Common - valyl-tRNA synthetase RSal33209_3261 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163841157 Common htpX heat shock protein RSal33209_2422 9 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 163842246 Common - alpha-ketoglutarate permease RSal33209_3528 138 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840120 Common - CrcB family protein RSal33209_1374 2 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 163841858 Common - allophanate hydrolase subunit 1 RSal33209_3131 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 163840291 Common - DNA excisionase, ABC transporter domain RSal33209_1546 244 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 163842192 Common - IS994 RSal33209_3474 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842265 Common mviN virulence factor RSal33209_3547 89 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 163842200 Common nrdI.2 NrdI RSal33209_3482 40 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 163841692 Common - carnitine racemase-like protein RSal33209_2961 93 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 163839274 Common - cystine transport system, ATP-binding protein RSal33209_0515 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 163839997 Common - transcriptional regulator, TetR family RSal33209_1251 19 COG1309 AcrR, Transcriptional regulator Transcription 163839635 Common - antibiotic biosynthesis monooxygenase RSal33209_0883 5 COG1359 COG1359, Uncharacterized conserved protein Function unknown 163839673 Common - beta-lactamase family like protein RSal33209_0921 3 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163840887 Common - LSU ribosomal protein L30P RSal33209_2146 91 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 163839457 Common - dihydrodipicolinate synthase RSal33209_0701 234 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 163839837 Common - hypothetical protein RSal33209_1090 131 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 163839988 Common - hypothetical protein RSal33209_1241 26 COG5282 COG5282, Uncharacterized conserved protein Function unknown 163838926 Common - transcriptional regulator/sugar kinase RSal33209_0161 171 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163838774 Common - hypothetical protein RSal33209_0005 18 COG5512 COG5512, Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives General function prediction only 163839654 Common - glutaryl-CoA dehydrogenase RSal33209_0902 160 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163841015 Common - ATP-binding protein (contains P-loop) RSal33209_2275 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 163840345 Common - O-acetyl-L-homoserine sulfhydrolase RSal33209_1600 194 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 163839964 Common - hypothetical protein RSal33209_1217 3 None None None 163838855 Common - hydrolase (HAD superfamily) RSal33209_0090 86 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 163839066 Common - succinate dehydrogenase flavoprotein subunit RSal33209_0301 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 163839606 Common - two component system histidine kinase RSal33209_0853 134 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163840790 Common - acyl-CoA dehydrogenase RSal33209_2048 5 None None None 163839880 Common - MFS transporter RSal33209_1133 30 None None None 163839631 Common - ABC transporter ATP-binding protein RSal33209_0879 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163841514 Common - glucokinase RSal33209_2780 5 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163842276 Common - LSU ribosomal protein L34P RSal33209_3558 188 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 163839193 Pathogen - hypothetical protein RSal33209_0433 1 None None None 163842100 Common - chitooligosaccharide deacetylase RSal33209_3381 35 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 163841218 Pathogen - hypothetical protein RSal33209_2483 1 None None None 163841436 Common - 1,4-dihydroxy-2-naphthoate polyprenyltransferase RSal33209_2702 74 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 163838994 Common - beta-lactamase family protein RSal33209_0229 111 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163841348 Common - hypothetical protein RSal33209_2614 2 None None None 163841826 Common - 3-oxoacyl-[acyl-carrier-protein] synthase RSal33209_3096 54 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841052 Common - IS994 RSal33209_2312 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838998 Common - glucokinase regulatory protein RSal33209_0233 86 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 163841011 Common - glyceraldehyde 3-phosphate dehydrogenase RSal33209_2271 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 163839906 Common - glyoxalase family protein RSal33209_1159 15 None None None 163840417 Common - GMP synthase (glutamine-hydrolyzing) RSal33209_1672 136 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 163840555 Common - oxoglutarate semialdehyde dehydrogenase RSal33209_1813 42 None None None 163839241 Common - chaperonin GroEL RSal33209_0482 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 163841168 Common - dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex RSal33209_2433 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 163840382 Common - hypothetical protein RSal33209_1637 47 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 163840216 Common - glutamate racemase RSal33209_1471 187 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 163839872 Common - short chain dehydrogenase RSal33209_1125 87 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163842176 Pathogen - hypothetical protein RSal33209_3458 1 None None None 163838937 Pathogen - hypothetical protein RSal33209_0172 1 None None None 163841526 Common - phosphohydrolase (MutT/nudix family protein) RSal33209_2792 30 None None None 163840922 Common - phosphatase RSal33209_2181 3 COG0546 Gph, Predicted phosphatases General function prediction only 163839139 Common - hypothetical protein RSal33209_0375 6 COG2879 COG2879, Uncharacterized small protein Function unknown 163840988 Common - glucose-6-phosphate isomerase RSal33209_2248 110 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 163839281 Common - hypothetical membrane protein RSal33209_0522 13 None None None 163839493 Common - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit RSal33209_0737 215 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 163841910 Common - dihydroxyacetone kinase RSal33209_3184 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 163841706 Common - putative integral membrane protein RSal33209_2975 7 None None None 163841743 Common - hypothetical cytosolic protein RSal33209_3013 17 None None None 163839233 Common - siderophore-interacting protein RSal33209_0474 63 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 163840748 Common - peptidyl-dipeptidase DCP RSal33209_2006 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 163841958 Common - IS994 RSal33209_3232 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839995 Common - transcriptional regulator, MarR family RSal33209_1249 137 COG1733 COG1733, Predicted transcriptional regulators Transcription 163840132 Common - transcriptional regulator, PadR family protein RSal33209_1386 64 COG1695 COG1695, Predicted transcriptional regulators Transcription 163840821 Common - glucose-1-phosphate adenylyltransferase RSal33209_2080 177 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 163839270 Pathogen fdhD.2 formate dehydrogenase protein RSal33209_0511 1 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 163840957 Common - transcriptional regulator, ArsR family RSal33209_2216 94 COG0640 ArsR, Predicted transcriptional regulators Transcription 163842025 Common - hypothetical protein RSal33209_3303 24 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 163841665 Common - asparagine synthetase (glutamine-hydrolyzing) RSal33209_2934 140 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 163841814 Common - alpha-glucosidase RSal33209_3084 126 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163841783 Common - aldose 1-epimerase RSal33209_3053 24 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 163840000 Pathogen - hypothetical membrane protein RSal33209_1254 1 None None None 163839955 Common - glycine oxidase RSal33209_1208 14 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 163840581 Pathogen - hypothetical protein RSal33209_1839 1 None None None 163839518 Common - acetyltransferase, GNAT family RSal33209_0762 34 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 163838825 Common - tRNA-specific adenosine deaminase RSal33209_0059 204 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 163841192 Pathogen - hypothetical protein RSal33209_2457 1 None None None 163842000 Common - putative dinucleotide-utilizing enzyme RSal33209_3277 49 COG1712 COG1712, Predicted dinucleotide-utilizing enzyme General function prediction only 163839629 Common - ABC transporter permease protein RSal33209_0877 3 COG3559 TnrB3, Putative exporter of polyketide antibiotics Cell envelope biogenesis, outer membrane 163840402 Common - putative transport protein RSal33209_1657 199 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 163840022 Common - flavoprotein involved in K+ transport RSal33209_1276 36 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 163840419 Common - cysteine desulfhydrase RSal33209_1674 233 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 163839027 Common chvE multiple sugar-binding protein RSal33209_0262 90 COG4213 XylF, ABC-type xylose transport system, periplasmic component Carbohydrate transport and metabolism 163839111 Pathogen - hypothetical membrane protein RSal33209_0347 1 None None None 163841524 Common - serine protease RSal33209_2790 186 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 163840276 Common - phosphonates transport ATP-binding protein RSal33209_1531 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 163840689 Common - transcriptional regulator, TetR family RSal33209_1947 48 COG1309 AcrR, Transcriptional regulator Transcription 163839106 Common - secretory serine protease RSal33209_0342 10 None None None 163841137 Common - K+ transport systems, NAD-binding component RSal33209_2402 17 None None None 163839268 Common fdhD.1 formate dehydrogenase protein RSal33209_0509 135 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 163841747 Pathogen - hypothetical protein RSal33209_3017 1 None None None 163839471 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_0715 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 163839736 Common nusG transcription termination/antitermination factor RSal33209_0987 215 COG0250 NusG, Transcription antiterminator Transcription 163840986 Common - transketolase RSal33209_2246 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 163841720 Common - transcriptional regulator, TetR family RSal33209_2990 66 COG1309 AcrR, Transcriptional regulator Transcription 163838780 Common - glycosyltransferase RSal33209_0013 199 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 163839019 Common - putative efflux protein RSal33209_0254 4 None None None 163840079 Common - transcriptional regulator, DeoR family RSal33209_1333 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 163839713 Pathogen - hypothetical membrane protein RSal33209_0963 1 COG5186 PAP1, Poly(A) polymerase RNA processing and modification 163839490 Common - peptidoglycan-binding cell wall degradation protein RSal33209_0734 6 None None None 163838822 Common - hypothetical transglycosylase RSal33209_0056 14 None None None 163842101 Common - COA bindng protein RSal33209_3382 126 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 163842162 Common - zinc metallohydrolase, glyoxalase II family RSal33209_3444 50 None None None 163842202 Common - ribonucleoside-diphosphate reductase beta chain RSal33209_3484 148 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 163840017 Common - IS994 RSal33209_1271 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840433 Common - serine protease, trypsin family RSal33209_1688 5 None None None 163840263 Common - L-aspartate oxidase RSal33209_1518 92 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 163840076 Common - glucosamine--fructose-6-phosphate aminotransferase (isomerizing) RSal33209_1330 212 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 163841595 Common - Fe3+-siderophore transport system, ATP-binding protein RSal33209_2862 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 163840778 Common - 20S proteasome beta-subunit RSal33209_2036 49 COG0638 PRE1, 20S proteasome, alpha and beta subunits Posttranslational modification, protein turnover, chaperones 163841994 Common - trigger factor, ppiase RSal33209_3269 208 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 163840425 Common - nitrile hydratase subunit beta RSal33209_1680 36 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 163839764 Common - ABC transporter sugar permease RSal33209_1015 148 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163841101 Pathogen - hypothetical protein RSal33209_2366 1 None None None 163841803 Common - hypothetical protein RSal33209_3073 4 None None None 163839006 Common - IMP cyclohydrolase RSal33209_0241 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 163840146 Common - manganese transport system membrane protein A RSal33209_1400 45 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 163842034 Pathogen - hypothetical protein RSal33209_3313 1 None None None 163840705 Common - carbamoyl-phosphate synthase large subunit RSal33209_1963 235 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 163841117 Common - enoyl-CoA hydratase/carnithine racemase RSal33209_2382 19 None None None 163840809 Common - L-kynurenine hydrolase RSal33209_2068 160 COG3844 COG3844, Kynureninase Amino acid transport and metabolism 163840170 Common - transporter, MFS superfamily RSal33209_1425 69 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 163839947 Common - adenine specific DNA methylase RSal33209_1200 138 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 163842238 Common - hypothetical protein RSal33209_3520 3 None None None 163841366 Common - hypothetical protein RSal33209_2632 2 None None None 163839487 Common - GTP-binding protein RSal33209_0731 222 COG2262 HflX, GTPases General function prediction only 163840731 Common - aspartyl-tRNA synthetase RSal33209_1989 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163841181 Common - hypothetical membrane spanning protein RSal33209_2446 15 None None None 163842002 Common - coenzyme F390 synthetase RSal33209_3279 40 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 163839447 Common - 5'-methylthioadenosine phosphorylase RSal33209_0691 89 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 163840879 Common - hypothetical protein RSal33209_2138 4 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163840855 Common - IS994 RSal33209_2114 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840111 Common - N-acetylmuramoyl-L-alanine amidase RSal33209_1365 38 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 163841792 Common soxR redox-sensitive transcriptional activator RSal33209_3062 55 COG0789 SoxR, Predicted transcriptional regulators Transcription 163839593 Common - hypothetical protein RSal33209_0840 4 None None None 163839696 Common - ABC transporter permease protein RSal33209_0946 5 None None None 163841146 Common - hypothetical protein RSal33209_2411 8 None None None 163842042 Common - Zn-ribbon protein, possibly nucleic acid-binding RSal33209_3321 32 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 163838882 Common - ABC-type sugar transport system, periplasmic component RSal33209_0117 7 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163840164 Pathogen - hypothetical protein RSal33209_1419 1 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 163841917 Common - acylamino-acid-releasing enzyme RSal33209_3191 15 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 163839857 Common - secreted protein, CHAP domain RSal33209_1110 14 None None None 163840509 Common - inosine-5'-monophosphate dehydrogenase RSal33209_1765 238 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 163840817 Common - putative carboxylesterase type B RSal33209_2076 53 COG2272 PnbA, Carboxylesterase type B Lipid metabolism 163840847 Common - BioY family protein RSal33209_2106 5 COG1268 BioY, Uncharacterized conserved protein General function prediction only 163840914 Common - SSU ribosomal protein S7P RSal33209_2173 240 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 163840811 Common - MaoC domain protein dehydratase RSal33209_2070 25 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163840007 Common - deoxyribodipyrimidine photolyase RSal33209_1261 102 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 163839954 Common - thiamin-phosphate pyrophosphorylase RSal33209_1207 62 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 163841533 Common - IS994 RSal33209_2799 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839854 Common - hypothetical protein RSal33209_1107 16 None None None 163840971 Common - putative ferritin family protein RSal33209_2231 83 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 163840524 Common - spermidine synthase RSal33209_1780 14 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 163841270 Common - cyclohexanone monooxygenase RSal33209_2535 73 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 163840872 Common - MaoC domain protein RSal33209_2131 32 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163839283 Common - acyl-CoA dehydrogenase RSal33209_0525 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163839279 Common - hypothetical membrane protein RSal33209_0520 2 None None None 163840258 Common - amino acid transporter RSal33209_1513 169 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 163842117 Common - IS994 RSal33209_3398 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840803 Common - putative Iron(III) dicitrate-transport system permease protein RSal33209_2062 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 163840397 Common - hypothetical protein RSal33209_1652 5 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 163841282 Common - heme oxygenase RSal33209_2547 23 COG5398 COG5398, Heme oxygenase Inorganic ion transport and metabolism 163842229 Pathogen - hypothetical protein RSal33209_3511 1 None None None 163840908 Pathogen - hypothetical protein RSal33209_2167 1 None None None 163839031 Common - putative transferase RSal33209_0266 199 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 163841499 Common - acetyl-coenzyme A synthetase RSal33209_2765 174 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 163840440 Common - carboxylate-amine ligase RSal33209_1695 12 COG2170 COG2170, Uncharacterized conserved protein Function unknown 163839819 Common - nitrogen regulatory protein P-II RSal33209_1072 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 163840182 Common - UDP-N-acetyl-D-quinovosamine 4-epimerase RSal33209_1437 188 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163839177 Common - guanyl-specific ribonuclease RSal33209_0414 25 COG4290 COG4290, Guanyl-specific ribonuclease Sa Nucleotide transport and metabolism 163841281 Common - hypothetical protein RSal33209_2546 9 None None None 163841403 Common - protease II RSal33209_2669 102 COG1770 PtrB, Protease II Amino acid transport and metabolism 163839526 Common - non-ribosomal peptide synthetase RSal33209_0770 19 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 163840142 Common - putative magnesium and cobalt efflux protein, CBS domain RSal33209_1396 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 163839128 Common iolE.2 IolE RSal33209_0364 11 None None None 163841563 Common - IS994 RSal33209_2830 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841925 Common - hypothetical protein RSal33209_3199 9 COG2267 PldB, Lysophospholipase Lipid metabolism 163842222 Common - gamma-glutamyltranspeptidase RSal33209_3504 137 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 163842070 Common - ferric enterobactin transporter RSal33209_3351 24 COG4592 FepB, ABC-type Fe2+-enterobactin transport system, periplasmic component Inorganic ion transport and metabolism 163840334 Common - putative lysophospholipase RSal33209_1589 19 COG2267 PldB, Lysophospholipase Lipid metabolism 163838794 Common recQ ATP-dependent DNA helicase RSal33209_0027 192 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 163840248 Common - 3,4-dihydroxyphenylacetate 2,3-dioxygenase RSal33209_1503 21 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 163839210 Pathogen - hypothetical protein RSal33209_0451 1 None None None 163842054 Pathogen - hypothetical protein RSal33209_3334 1 None None None 163839195 Common - IS994 RSal33209_0435 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839327 Common - pyruvate dehydrogenase E1 component beta subunit RSal33209_0569 184 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 163839888 Common - phosphohydrolase, MutT/nudix family RSal33209_1141 27 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163841321 Common - CPRD14 protein RSal33209_2587 26 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163841548 Common - IS994 RSal33209_2815 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840787 Common bacA bacitracin resistance protein RSal33209_2045 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 163840779 Common - hypothetical protein RSal33209_2037 14 None None None 163840850 Common - acetyl-CoA acetyltransferase RSal33209_2109 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163839320 Common - dethiobiotin synthetase RSal33209_0562 15 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 163842236 Common - hypothetical protein RSal33209_3518 2 COG3247 HdeD, Uncharacterized conserved protein Function unknown 163842031 Pathogen - hypothetical protein RSal33209_3310 1 None None None 163839825 Common thiC thiamine biosynthesis protein RSal33209_1078 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 163839668 Common kdpD sensor protein RSal33209_0916 219 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 163839232 Common - formamidopyrimidine-DNA glycosylase RSal33209_0473 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 163841677 Common - hypothetical membrane protein RSal33209_2946 39 None None None 163840966 Common - aspartate 1-decarboxylase RSal33209_2226 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 163839577 Common - 2-methylcitrate synthase RSal33209_0824 194 COG0372 GltA, Citrate synthase Energy production and conversion 163840010 Pathogen - hypothetical membrane protein RSal33209_1264 1 None None None 163841309 Common - ABC transporter ATP-binding protein RSal33209_2575 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 163841026 Common - trans-aconitate methyltransferase RSal33209_2286 84 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 163840670 Common - hypothetical protein RSal33209_1928 15 None None None 163841492 Common - DNA polymerase I RSal33209_2758 12 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 163841730 Common - transglutaminase-like enzyme, hypothetical cysteine protease RSal33209_3000 82 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 163839646 Common - acyl-CoA desaturase RSal33209_0894 70 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 163839219 Common - hypothetical protein RSal33209_0460 10 None None None 163840306 Pathogen - hypothetical protein RSal33209_1561 1 None None None 163841479 Pathogen - hypothetical protein RSal33209_2745 1 None None None 163841615 Common - ISRs2 transposase RSal33209_2882 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841542 Common - ABC transporter ATP-binding protein RSal33209_2808 12 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 163841639 Common - tRNA-dihydrouridine synthase RSal33209_2908 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 163839058 Common - tryptophanyl-tRNA synthetase RSal33209_0293 229 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163840472 Common - putative sugar kinase RSal33209_1727 210 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 163840179 Common - peptide release factor-glutamine N5-methyltransferase RSal33209_1434 216 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 163841735 Common - long-chain-fatty-acid--CoA ligase RSal33209_3005 118 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 163839208 Common - disulfide bond isomerase RSal33209_0448 17 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 163839570 Common - integrase/recombinase (XerD/RipX family) RSal33209_0817 230 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 163839812 Common - hypothetical protein RSal33209_1065 2 None None None 163841902 Common - phosphate-binding protein RSal33209_3176 104 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 163841227 Common ftsQ FtsQ RSal33209_2492 28 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 163839870 Pathogen - hypothetical protein RSal33209_1123 1 None None None 163839220 Common cutC copper homeostasis protein RSal33209_0461 58 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 163841049 Common - drug resistance transporter EmrB/QacA subfamily RSal33209_2309 235 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840566 Common - transporter, MFS superfamily RSal33209_1824 199 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163839661 Pathogen - hypothetical membrane protein RSal33209_0909 1 None None None 163839778 Common - IS994 RSal33209_1029 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842257 Common - transcriptional regulator, MarR family RSal33209_3539 145 COG1733 COG1733, Predicted transcriptional regulators Transcription 163840314 Common - hypothetical protein RSal33209_1569 6 None None None 163839393 Common - hypothetical protein RSal33209_0637 2 None None None 163840679 Common - putative DNA uptake protein RSal33209_1937 31 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 163839983 Common - macrolide 2'-phosphotransferase, putative RSal33209_1236 23 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 163841250 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase RSal33209_2515 145 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 163840500 Common - hypothetical membrane protein RSal33209_1756 17 None None None 163840958 Pathogen - hypothetical protein RSal33209_2217 1 COG3832 COG3832, Uncharacterized conserved protein Function unknown 163840101 Common - hypothetical protein RSal33209_1355 2 None None None 163839810 Common - glutamyl-tRNA synthetase RSal33209_1063 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 163841799 Common - transcriptional repressor RSal33209_3069 126 COG1609 PurR, Transcriptional regulators Transcription 163839933 Common - predicted secreted protein RSal33209_1186 6 None None None 163840325 Common - transcriptional regulator, GntR family RSal33209_1580 123 COG2188 PhnF, Transcriptional regulators Transcription 163840737 Common - GTP pyrophosphokinase RSal33209_1995 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 163839609 Common - putative acyltransferase RSal33209_0856 8 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 163842125 Common - orotate phosphoribosyltransferase RSal33209_3406 174 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 163840195 Common - hypothetical protein RSal33209_1450 12 None None None 163839464 Common - transcriptional regulator, TetR family RSal33209_0708 48 COG1309 AcrR, Transcriptional regulator Transcription 163841045 Common - low-affinity inorganic phosphate transporter RSal33209_2305 99 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 163839161 Common - thymidylate kinase RSal33209_0398 225 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 163840579 Common - indigoidine synthase RSal33209_1837 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163840540 Common - IS994 RSal33209_1798 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841263 Common - hypothetical cytosolic protein RSal33209_2528 76 COG1259 COG1259, Uncharacterized conserved protein Function unknown 163841831 Common - universal stress protein family RSal33209_3104 24 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 163839727 Common pspC.2 putative stress-responsive transcriptional regulator RSal33209_0977 4 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 163842188 Common - two component response regulator RSal33209_3470 194 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163840548 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_1806 68 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163840108 Common - beta-N-acetylhexosaminidase RSal33209_1362 161 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 163841586 Common - hypothetical protein RSal33209_2853 41 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163838980 Common - agmatinase RSal33209_0215 154 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 163839085 Common - nucleoside transport system permease protein RSal33209_0320 56 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 163840454 Common - glycosyl transferase, group I family RSal33209_1709 209 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163839352 Pathogen - hypothetical protein RSal33209_0594 1 None None None 163840978 Common sufD FeS assembly ATPase RSal33209_2238 182 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 163840668 Common dnaJ.2 chaperone protein RSal33209_1926 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 163840368 Common - NAD-specific glutamate dehydrogenase RSal33209_1623 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 163841361 Common - fumarate reductase flavoprotein subunit RSal33209_2627 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 163839203 Common - hypothetical protein RSal33209_0443 2 None None None 163839243 Common - ribonuclease HI RSal33209_0484 174 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 163839757 Common - esterase/lipase RSal33209_1008 114 COG0657 Aes, Esterase/lipase Lipid metabolism 163841980 Common - nucleoside diphosphate kinase RSal33209_3255 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 163841788 Common - hypothetical membrane spanning protein RSal33209_3058 27 COG4760 COG4760, Predicted membrane protein Function unknown 163839065 Common - succinate dehydrogenase iron-sulfur protein RSal33209_0300 207 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 163841566 Common - transcriptional regulator RSal33209_2833 13 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 163840970 Common - hypothetical protein RSal33209_2230 4 None None None 163839600 Common - macrolide-efflux protein RSal33209_0847 135 None None None 163841880 Pathogen - hypothetical protein RSal33209_3153 1 None None None 163839276 Pathogen - hypothetical protein RSal33209_0517 1 None None None 163839215 Pathogen - hypothetical protein RSal33209_0456 1 None None None 163841574 Common - metal-dependent hydrolase RSal33209_2841 13 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 163841041 Common - oxidoreductase RSal33209_2301 187 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163842047 Common - 6-phosphogluconate dehydrogenase RSal33209_3326 182 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 163841960 Common - ABC transport system substrate-binding protein RSal33209_3234 30 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163839136 Common - alpha/beta superfamily RSal33209_0372 19 None None None 163840165 Common - oxidoreductase, FAD-binding domain protein RSal33209_1420 3 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 163841796 Common - disaccharide transport system permease protein RSal33209_3066 134 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163839099 Common - hypothetical protein RSal33209_0334 25 COG1507 COG1507, Uncharacterized conserved protein Function unknown 163838978 Pathogen - hypothetical protein RSal33209_0213 1 None None None 163841059 Pathogen dppC.5 dipeptide transport system permease protein RSal33209_2319 1 None None None 163841408 Common - transcriptional regulator, TetR family RSal33209_2674 26 COG1309 AcrR, Transcriptional regulator Transcription 163842118 Pathogen - putative two component system sensor kinase RSal33209_3399 1 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163840141 Pathogen - hypothetical protein RSal33209_1395 1 None None None 163839455 Common - hypothetical protein RSal33209_0699 20 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 163841470 Common - two-component response regulator RSal33209_2736 15 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 163840832 Common - LSU ribosomal protein L31P RSal33209_2091 183 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 163840869 Pathogen - putative lipase RSal33209_2128 1 COG2267 PldB, Lysophospholipase Lipid metabolism 163841908 Common - dihydroxyacetone kinase phosphotransfer protein RSal33209_3182 40 COG3412 COG3412, Uncharacterized protein conserved in bacteria Function unknown 163839371 Common - flavin reductase-like, FMN-binding protein RSal33209_0614 110 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 163842061 Common - peptide synthetase RSal33209_3341 212 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163839312 Common - 3-ketoacid-CoA transferase, beta subunit RSal33209_0554 96 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 163841375 Common - amino acid ABC transporter permease protein RSal33209_2641 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 163841421 Common - protein tyrosine phosphatase RSal33209_2687 34 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 163841821 Common - general stress protein, Gls24 family RSal33209_3091 34 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 163839733 Common - IS994 RSal33209_0983 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841921 Common - hemolysin RSal33209_3195 227 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 163840483 Pathogen - hypothetical protein RSal33209_1738 1 None None None 163841356 Common - Xaa-Pro dipeptidyl-peptidase RSal33209_2622 5 None None None 163840152 Common - thiosulfate sulfurtransferase RSal33209_1406 130 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 163839095 Common - acetyltransferase, GNAT family RSal33209_0330 38 COG0456 RimI, Acetyltransferases General function prediction only 163838929 Common - disaccharide transport ATP-binding protein RSal33209_0164 175 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841414 Common - 2-hydroxyphenylacetyl-CoA ring opening enzyme RSal33209_2680 41 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163839423 Common - hypothetical protein RSal33209_0667 4 None None None 163839415 Common - tRNA pseudouridine synthase B RSal33209_0659 244 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 163840088 Common - glycosyl transferase, group 1 family protein RSal33209_1342 163 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163841050 Common - transcriptional regulator RSal33209_2310 6 None None None 163839979 Common - DNA polymerase III, epsilon chain RSal33209_1232 66 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 163841001 Common - ABC transporter, nucleotide binding/ATPase protein RSal33209_2261 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 163839839 Common - Mg chelatase-related protein RSal33209_1092 186 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 163841607 Common - LSU ribosomal protein L28P RSal33209_2874 134 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 163841162 Common - hypothetical protein RSal33209_2427 2 None None None 163840384 Common - Predicted amidophosphoribosyltransferase RSal33209_1639 19 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 163838894 Common - hypothetical membrane protein RSal33209_0129 2 None None None 163840465 Common - transcriptional regulator, TetR family RSal33209_1720 60 COG1309 AcrR, Transcriptional regulator Transcription 163841354 Common - phosphoadenosine phosphosulfate reductase RSal33209_2620 2 None None None 163840351 Pathogen - hypothetical protein RSal33209_1606 2 None None None 163838811 Common - putative permease RSal33209_0045 64 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 163839124 Common - hypothetical cytosolic protein RSal33209_0360 13 None None None 163839759 Common - O-succinylhomoserine sulfhydrylase RSal33209_1010 203 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 163840236 Common - ADP-ribosylglycohydrolase RSal33209_1491 31 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 163840791 Common - acyl-CoA dehydrogenase RSal33209_2049 4 None None None 163841095 Common - hypothetical membrane protein RSal33209_2356 2 None None None 163841449 Common - phosphoserine phosphatase RSal33209_2715 95 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 163839462 Common - transcriptional regulator, Cro/CI family RSal33209_0706 73 COG1396 HipB, Predicted transcriptional regulators Transcription 163839911 Common oppB.1 oligopeptide transporter, permease protein RSal33209_1164 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841017 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase RSal33209_2277 154 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 163842065 Common - hypothetical protein RSal33209_3345 10 None None None 163841153 Common - transport ATP-binding protein RSal33209_2418 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 163842218 Common mutT mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase) RSal33209_3500 6 None None None 163840046 Common - transcriptional regulator, LysR family RSal33209_1300 115 COG0583 LysR, Transcriptional regulator Transcription 163841430 Pathogen - hypothetical protein RSal33209_2696 1 None None None 163840982 Common - ABC-type multidrug transport system ATPase component RSal33209_2242 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163839693 Common - MaoC-like dehydratase RSal33209_0943 56 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163840102 Common - peptide chain release factor 2 RSal33209_1356 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 163840711 Common - hypothetical membrane protein RSal33209_1969 33 COG2339 COG2339, Predicted membrane protein Function unknown 163841528 Common - hypothetical protein RSal33209_2794 16 None None None 163838935 Common - malate synthase RSal33209_0170 56 COG2225 AceB, Malate synthase Energy production and conversion 163840642 Common - glycine betaine-binding protein RSal33209_1900 88 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 163841236 Common - hypothetical protein RSal33209_2501 6 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 163840068 Common - urocanate hydratase RSal33209_1322 140 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 163841896 Common - hypothetical protein RSal33209_3170 7 None None None 163840218 Common - ribonuclease PH RSal33209_1473 188 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 163840042 Common - IS994 RSal33209_1296 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842170 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase RSal33209_3452 32 None None None 163838916 Common - hypothetical protein RSal33209_0151 13 COG5450 COG5450, Transcription regulator of the Arc/MetJ class Transcription 163842030 Common - hypothetical protein RSal33209_3309 6 None None None 163840747 Pathogen - hypothetical protein RSal33209_2005 1 None None None 163839804 Common - two-component sensor kinase RSal33209_1057 15 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 163840940 Common - IS994 RSal33209_2199 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841124 Common - oxidoreductase RSal33209_2389 63 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163840405 Common - dipeptide transport ATP-binding protein RSal33209_1660 222 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840011 Common - phage shock protein A RSal33209_1265 83 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 163842159 Common - 3-ketoacyl-CoA thiolase RSal33209_3441 171 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163840511 Common - putative acyltransferase RSal33209_1767 78 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 163841862 Common - Co/Zn/Cd cation transporter RSal33209_3135 33 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 163840319 Common - transcriptional regulator, AsnC family RSal33209_1574 44 COG1522 Lrp, Transcriptional regulators Transcription 163838956 Common - D-alanyl-D-alanine carboxypeptidase RSal33209_0191 12 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 163840241 Common - transporter, MFS superfamily RSal33209_1496 23 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 163841243 Common - hypothetical protein RSal33209_2508 2 None None None 163840286 Common - flavodoxin RSal33209_1541 10 COG0716 FldA, Flavodoxins Energy production and conversion 163841856 Common - allophanate hydrolase subunit 2 RSal33209_3129 100 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 163841934 Common - transporter RSal33209_3208 12 COG3428 COG3428, Predicted membrane protein Function unknown 163839616 Common - amidohydrolase-like protein RSal33209_0864 113 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 163840343 Common - homoserine O-acetyltransferase RSal33209_1598 132 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 163840069 Common - formiminoglutamase RSal33209_1323 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163840126 Common - inositol monophosphatase family RSal33209_1380 200 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 163840899 Common - LSU ribosomal protein L16P RSal33209_2158 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 163840498 Common - DNA helicase RSal33209_1754 49 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 163841809 Pathogen - hypothetical protein RSal33209_3079 1 None None None 163841405 Common - transcriptional regulator, LytR family RSal33209_2671 44 COG1316 LytR, Transcriptional regulator Transcription 163841625 Common - serine/threonine protein kinase RSal33209_2893 158 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 163839325 Common - histidinol-phosphate aminotransferase RSal33209_0567 241 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 163842087 Common - hypothetical protein RSal33209_3368 12 None None None 163839181 Common - IS994 RSal33209_0418 35 None None None 163838925 Common - sugar isomerase/epimerase RSal33209_0160 5 None None None 163838861 Common - proline iminopeptidase RSal33209_0096 90 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163841319 Pathogen - hypothetical protein RSal33209_2585 1 None None None 163841498 Common - hypothetical protein RSal33209_2764 2 None None None 163838892 Common - transporter, MMPL family RSal33209_0127 42 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 163839420 Common - hypothetical zinc binding protein RSal33209_0664 5 None None None 163841006 Common - hypothetical protein RSal33209_2266 8 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 163841087 Common ribD riboflavin biosynthesis protein RSal33209_2348 215 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 163842240 Common - hypothetical protein RSal33209_3522 2 None None None 163839366 Common - monoxygenase RSal33209_0609 11 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163839409 Common - hypothetical cytosolic protein RSal33209_0653 30 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 163839308 Common - acetyl/propionyl CoA carboxylase, beta subunit RSal33209_0550 144 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 163838809 Common - phage infection protein RSal33209_0043 35 COG1511 COG1511, Predicted membrane protein Function unknown 163841582 Common - hypothetical protein RSal33209_2849 8 None None None 163842141 Common - ISRs2 transposase RSal33209_3422 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839351 Common - ABC-type sugar transport system, periplasmic component RSal33209_0593 74 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163838872 Pathogen - hypothetical membrane protein RSal33209_0107 1 None None None 163842104 Common - IS994 RSal33209_3385 39 None None None 163839472 Common - transcriptional regulator, TetR family RSal33209_0716 7 None None None 163840145 Common - ABC transporter, ATP-binding protein RSal33209_1399 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 163842274 Common - hypothetical cytosolic protein RSal33209_3556 184 COG0759 COG0759, Uncharacterized conserved protein Function unknown 163840892 Common - LSU ribosomal protein L5P RSal33209_2151 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 163839546 Common - transcriptional regulator, LuxR family RSal33209_0790 7 None None None 163841631 Common - citrate synthase RSal33209_2899 3 COG0372 GltA, Citrate synthase Energy production and conversion 163839333 Common - putative benzoate transporter RSal33209_0575 32 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 163840885 Common secY protein translocase subunit RSal33209_2144 227 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 163840915 Common - SSU ribosomal protein S12P RSal33209_2174 244 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 163840725 Pathogen - hypothetical protein RSal33209_1983 1 None None None 163840390 Pathogen - hypothetical protein RSal33209_1645 1 None None None 163838907 Common - MFS transporter RSal33209_0142 12 None None None 163839847 Common - acyl carrier protein RSal33209_1100 200 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163840720 Common - hypothetical protein RSal33209_1978 68 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 163839178 Common - hypothetical protein RSal33209_0415 5 COG2732 COG2732, Barstar, RNAse (barnase) inhibitor Transcription 163839544 Common - ABC-type multidrug transport protein, ATPase component RSal33209_0788 11 None None None 163840828 Common - aminopeptidase N RSal33209_2087 154 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 163841516 Common - hypothetical protein RSal33209_2782 28 COG3809 COG3809, Uncharacterized protein conserved in bacteria Function unknown 163840519 Common - ribonuclease III RSal33209_1775 216 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 163841778 Pathogen - hypothetical protein RSal33209_3048 1 None None None 163839781 Common - serine/threonine protein phosphatase RSal33209_1032 3 None None None 163840931 Pathogen - hypothetical protein RSal33209_2190 1 None None None 163840051 Pathogen - hypothetical protein RSal33209_1305 1 None None None 163838782 Common - peptidyl-prolyl cis-trans isomerase B RSal33209_0015 150 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 163839968 Common - chlorite dismutase superfamily RSal33209_1221 40 COG3253 COG3253, Uncharacterized conserved protein Function unknown 163839701 Common - IS994 RSal33209_0951 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840858 Common - DNA-directed RNA polymerase alpha chain RSal33209_2117 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 163838902 Pathogen - hypothetical protein RSal33209_0137 1 None None None 163840638 Common - hypothetical membrane protein RSal33209_1896 14 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 163839142 Common - ABC transporter ATP-binding protein RSal33209_0378 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163840629 Common - cytosine/purines/uracil/thiamine/allantoin permease family protein RSal33209_1887 52 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 163841443 Common - phosphoglycerate mutase RSal33209_2709 20 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 163839005 Common - hydrolase, alpha/beta fold superfamily RSal33209_0240 92 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163840116 Common - IS994 RSal33209_1370 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839776 Common - IS994 RSal33209_1027 34 None None None 163841200 Common - hypothetical protein RSal33209_2465 2 None None None 163841813 Common - trehalose/maltose-binding protein RSal33209_3083 56 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 163841129 Common - cation-transporting ATPase RSal33209_2394 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 163842004 Common - possible carbamoyl phosphate synthase- inactivated RSal33209_3281 5 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 163838838 Pathogen - hypothetical protein RSal33209_0073 1 None None None 163839400 Common - transcriptional regulator, TetR family RSal33209_0644 14 None None None 163841312 Common - methyltransferase RSal33209_2578 48 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163838815 Pathogen - hypothetical protein RSal33209_0049 1 None None None 163839363 Pathogen - hypothetical protein RSal33209_0605 1 None None None 163839481 Common - membrane-bound transglycosylase RSal33209_0725 13 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 163842156 Common - electron transfer flavoprotein alpha-subunit RSal33209_3438 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 163839267 Common - formate dehydrogenase alpha subunit RSal33209_0508 175 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 163839262 Pathogen - predicted molybdopterin-guanine dinucleotide biosynthesis protein A RSal33209_0503 1 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 163839791 Common - acetolactate synthase small subunit RSal33209_1044 193 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 163839259 Common - cell wall-associated hydrolase RSal33209_0500 69 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 163838846 Common - hypothetical protein RSal33209_0081 24 COG3358 COG3358, Uncharacterized conserved protein Function unknown 163838971 Common - transcriptional regulator, Cro/CI family RSal33209_0206 98 COG1396 HipB, Predicted transcriptional regulators Transcription 163840295 Common - transcriptional regulator, AraC family RSal33209_1550 133 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 163839746 Common - ABC-type sugar transport system, permease component RSal33209_0997 149 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841949 Common - inorganic pyrophosphatase RSal33209_3223 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 163839728 Common - two-component signal transduction protein RSal33209_0978 21 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 163840326 Pathogen - hypothetical protein RSal33209_1581 1 None None None 163841506 Pathogen - hypothetical protein RSal33209_2772 1 None None None 163839510 Common - radical SAM superfamily protein RSal33209_0754 88 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 163840588 Common - acetyl-coenzyme A synthetase RSal33209_1846 221 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 163838777 Common - hypothetical membrane protein RSal33209_0008 19 None None None 163840656 Common - IS994 RSal33209_1914 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838852 Common - predicted glycosyl hydrolase RSal33209_0087 9 COG4833 COG4833, Predicted glycosyl hydrolase Carbohydrate transport and metabolism 163840956 Common - tryptophan 2,3-dioxygenase RSal33209_2215 41 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 163841296 Common - IS994 RSal33209_2561 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839582 Common - transcriptional regulator, IclR family RSal33209_0829 91 COG1414 IclR, Transcriptional regulator Transcription 163842074 Common - tRNA synthetases class I, catalytic domain RSal33209_3355 248 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 163842179 Common - hypothetical cytosolic protein RSal33209_3461 94 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 163840942 Pathogen - hypothetical protein RSal33209_2201 1 None None None 163840571 Common - transcriptional regulator, XRE family RSal33209_1829 41 None None None 163839957 Common thiS thiamine biosynthesis protein RSal33209_1210 10 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 163839901 Common - exodeoxyribonuclease VII large subunit RSal33209_1154 202 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 163840696 Common - mannosyltransferase RSal33209_1954 60 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163841491 Common - DNA polymerase I RSal33209_2757 13 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 163841226 Common ftsZ cell division protein RSal33209_2491 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 163840452 Common - sugar transport system permease RSal33209_1707 126 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163839149 Pathogen - hypothetical protein RSal33209_0385 1 None None None 163840228 Common - haloacid dehalogenase-like hydrolase RSal33209_1483 52 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 163841325 Common - prephenate dehydrogenase RSal33209_2591 149 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 163841341 Common - ferredoxin--NADP reductase RSal33209_2607 183 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 163842182 Common - long-chain-fatty-acid--CoA ligase RSal33209_3464 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163840851 Common - long-chain-fatty-acid--CoA ligase RSal33209_2110 215 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841951 Common - seryl-tRNA synthetase RSal33209_3225 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 163841694 Common - dihydrolipoamide dehydrogenase RSal33209_2963 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 163840997 Pathogen - hypothetical membrane protein RSal33209_2257 1 None None None 163839550 Common - putative 6-O-methylguanine-DNA methyltransferase RSal33209_0794 143 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 163841889 Common - sugar transport ATP-binding protein RSal33209_3162 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 163838841 Common - ATP-dependent helicase RSal33209_0076 18 None None None 163841657 Common - transcriptional regulator, LysR family RSal33209_2926 88 COG0583 LysR, Transcriptional regulator Transcription 163839720 Common - hypothetical protein RSal33209_0970 16 None None None 163841080 Common - imidazole glycerol phosphate synthase, cyclase subunit RSal33209_2341 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 163840265 Pathogen - hypothetical protein RSal33209_1520 1 None None None 163841159 Common - hypothetical protein RSal33209_2424 11 None None None 163839360 Common - ethanolamine permease RSal33209_0602 152 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 163841637 Common - DNA primase RSal33209_2906 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 163839881 Common - transcriptional regulator, ArsR family RSal33209_1134 9 COG0640 ArsR, Predicted transcriptional regulators Transcription 163840862 Common - translation initiation factor IF-1 RSal33209_2121 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 163841667 Common - transporter RSal33209_2936 28 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 163842131 Common - sugar transport system permease protein RSal33209_3412 198 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841771 Common - hypothetical protein RSal33209_3041 10 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 163841733 Common - tetrapyrrole (Corrin/Porphyrin) methylase family protein RSal33209_3003 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 163839823 Common - hypothetical membrane protein RSal33209_1076 3 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163839667 Common - potassium-transporting ATPase C chain RSal33209_0915 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 163839432 Pathogen - hypothetical protein RSal33209_0676 1 None None None 163842072 Common - enterochelin esterase RSal33209_3353 15 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 163839222 Common - hypothetical protein RSal33209_0463 4 None None None 163839395 Pathogen - hypothetical membrane protein RSal33209_0639 1 None None None 163841368 Common - hypothetical protein RSal33209_2634 2 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 163838957 Common - two component system histidine kinase RSal33209_0192 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 163840151 Common - cysteine synthase/cystathionine beta-synthase family RSal33209_1405 205 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 163839645 Common - hypothetical membrane protein RSal33209_0893 69 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 163839828 Common - SSU ribosomal protein S16P RSal33209_1081 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 163839254 Common - hypothetical protein RSal33209_0495 18 None None None 163841608 Common - LSU ribosomal protein L33P RSal33209_2875 132 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 163840528 Common - hypothetical protein RSal33209_1784 9 None None None 163839963 Pathogen - hypothetical protein RSal33209_1216 2 None None None 163841252 Common - hypothetical protein RSal33209_2517 2 None None None 163839303 Common - transcriptional regulator, AsnC family RSal33209_0545 61 COG1522 Lrp, Transcriptional regulators Transcription 163839376 Common - acid phosphatase RSal33209_0619 33 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 163840450 Common - sugar transport system permease RSal33209_1705 86 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163840965 Common - transcriptional regulator, LysR family RSal33209_2225 190 COG0583 LysR, Transcriptional regulator Transcription 163840663 Common - hypothetical protein RSal33209_1921 101 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 163839931 Common gluA glutamate transport ATP-binding protein RSal33209_1184 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 163842051 Common - SIR2 family protein RSal33209_3331 137 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 163840158 Common - transcriptional regulator, ArsR family RSal33209_1412 75 COG0640 ArsR, Predicted transcriptional regulators Transcription 163838864 Common relB RelB RSal33209_0099 10 COG4710 COG4710, Predicted DNA-binding protein with an HTH domain General function prediction only 163842013 Common - globin family protein RSal33209_3290 63 COG2346 COG2346, Truncated hemoglobins General function prediction only 163839419 Common - putative acetyltransferase RSal33209_0663 8 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163838960 Common - two-component response regulator RSal33209_0195 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163840595 Common - glucose/fructose transport protein RSal33209_1853 45 None None None 163840094 Common - type II secretion system protein E RSal33209_1348 138 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 163842180 Common - MoxR-like ATPase RSal33209_3462 176 COG0714 COG0714, MoxR-like ATPases General function prediction only 163841363 Common - transcriptional regulator, LysR family RSal33209_2629 156 COG0583 LysR, Transcriptional regulator Transcription 163839032 Common - hypothetical protein RSal33209_0267 7 None None None 163839151 Common - hypothetical protein RSal33209_0387 2 None None None 163838854 Common - glycerophosphoryl diester phosphodiesterase RSal33209_0089 63 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 163839430 Common - IS994 RSal33209_0674 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839849 Common - malonyl-CoA-[acyl-carrier-protein] transacylase RSal33209_1102 207 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 163840294 Common - glyoxalase family protein RSal33209_1549 30 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 163839249 Common - hypothetical protein RSal33209_0490 3 None None None 163839530 Common - quinone oxidoreductase RSal33209_0774 176 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163840475 Common - isochorismatase family protein RSal33209_1730 38 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 163841580 Common - cystathionine beta-lyase RSal33209_2847 10 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 163841603 Common - citrate-proton symporter RSal33209_2870 37 COG2851 CitM, H+/citrate symporter Energy production and conversion 163841903 Common - integral membrane protein RSal33209_3177 18 COG4129 COG4129, Predicted membrane protein Function unknown 163840886 Common - LSU ribosomal protein L15P RSal33209_2145 206 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 163839067 Common - succinate dehydrogenase cytochrome b556 subunit RSal33209_0302 14 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 163839192 Common - epoxide hydrolase RSal33209_0429 43 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163841043 Pathogen - hypothetical protein RSal33209_2303 1 None None None 163839168 Common - PhoU RSal33209_0405 197 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 163840273 Common - putative 3',5'-cyclic-nucleotide phosphodiesterase RSal33209_1528 23 COG1409 Icc, Predicted phosphohydrolases General function prediction only 163841418 Common - hypothetical protein RSal33209_2684 32 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163840826 Common - hypothetical protein RSal33209_2085 5 COG2308 COG2308, Uncharacterized conserved protein Function unknown 163839235 Pathogen - hypothetical protein RSal33209_0476 1 None None None 163841727 Common - MoxR-like ATPase RSal33209_2997 171 COG0714 COG0714, MoxR-like ATPases General function prediction only 163840695 Common - alpha/beta hydrolase fold protein RSal33209_1953 158 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163840743 Common ruvC crossover junction endodeoxyribonuclease RSal33209_2001 175 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 163840805 Common - copper resistance protein D RSal33209_2064 27 COG3336 COG3336, Predicted membrane protein Function unknown 163841842 Common - O-methyltransferase RSal33209_3115 99 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 163839944 Common - hypothetical protein RSal33209_1197 18 None None None 163841644 Common - two component system histidine kinase RSal33209_2913 62 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163839841 Common - IS994 RSal33209_1094 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840447 Common - 6-phospho-beta-glucosidase RSal33209_1702 47 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 163841327 Common scpB segregation and condensation protein RSal33209_2593 145 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 163839613 Common - cell wall hydrolase RSal33209_0861 27 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 163841097 Common - hypothetical protein RSal33209_2358 2 None None None 163841391 Common - enoyl-CoA hydratase RSal33209_2657 153 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 163842143 Common - thioredoxin reductase RSal33209_3424 203 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 163839779 Pathogen - hypothetical protein RSal33209_1030 2 None None None 163842056 Common - IS994 RSal33209_3336 39 None None None 163839980 Common - methylated-DNA--protein-cysteine methyltransferase RSal33209_1233 19 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 163840363 Common - UDP-galactopyranose mutase RSal33209_1618 56 COG0562 Glf, UDP-galactopyranose mutase Cell envelope biogenesis, outer membrane 163841213 Common - putative regulatory protein RSal33209_2478 175 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 163841289 Common - hypothetical protein RSal33209_2554 2 None None None 163840105 Common - peptidoglycan-specific endopeptidase, M23 family RSal33209_1359 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 163840251 Common - transcriptional regulator, GntR family RSal33209_1506 99 COG1802 GntR, Transcriptional regulators Transcription 163840756 Common - gluconate permease RSal33209_2014 76 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 163840357 Common capF putative capsular polysaccharide synthesis enzyme RSal33209_1612 20 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 163840552 Common - Xaa-Pro aminopeptidase RSal33209_1810 130 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 163841047 Common - hypothetical protein RSal33209_2307 29 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 163841540 Pathogen - hypothetical protein RSal33209_2806 1 None None None 163840789 Common - hypothetical protein RSal33209_2047 5 None None None 163840502 Common - ABC transporter ATP-binding protein RSal33209_1758 219 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163839539 Common - argininosuccinate synthase RSal33209_0783 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 163839587 Common - 2-dehydro-3-deoxyphosphogluconate aldolase RSal33209_0834 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 163838797 Common - gamma-glutamyltranspeptidase RSal33209_0030 109 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 163841336 Common - universal stress protein family RSal33209_2602 21 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 163841539 Pathogen - hypothetical protein RSal33209_2805 1 None None None 163839524 Common - membrane alanine aminopeptidase RSal33209_0768 74 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 163842267 Common - thioredoxin reductase RSal33209_3549 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 163840546 Common - putative regulatory protein RSal33209_1804 23 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 163840672 Common - oxygen-independent coproporphyrinogen-III oxidase RSal33209_1930 229 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 163841758 Common - fructose-1,6-bisphosphatase RSal33209_3028 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 163839709 Common - hypothetical membrane protein RSal33209_0959 6 COG4194 COG4194, Predicted membrane protein General function prediction only 163842123 Pathogen - beta-N-acetylhexosaminidase RSal33209_3404 4 COG3525 Chb, N-acetyl-beta-hexosaminidase Carbohydrate transport and metabolism 163840771 Common - hypothetical protein RSal33209_2029 2 None None None 163841203 Pathogen - hypothetical protein RSal33209_2468 1 None None None 163838889 Common - sodium/bile acid symporter RSal33209_0124 75 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 163840933 Common - hypothetical protein RSal33209_2192 3 None None None 163839349 Common - IS994 RSal33209_0591 38 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838986 Common - hypothetical protein RSal33209_0221 6 None None None 163841272 Common - hydrolase, alpha/beta fold superfamily RSal33209_2537 81 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163840371 Common - putative DNA-binding protein RSal33209_1626 7 None None None 163840058 Common oppF oligopeptide transport ATP-binding protein RSal33209_1312 204 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 163842221 Common - gamma-glutamyltranspeptidase RSal33209_3503 15 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 163839691 Pathogen - hypothetical protein RSal33209_0941 1 None None None 163841439 Common resC apocytochrome heme-lyase RSal33209_2705 125 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 163842208 Common - glutaredoxin RSal33209_3490 22 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 163840764 Common - membrane protease family, stomatin/prohibitin-like protein RSal33209_2022 219 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 163839286 Common - translation elongation factor Ts RSal33209_0528 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 163839017 Common livF branched-chain amino acid transport ATP-binding protein RSal33209_0252 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 163839070 Common - hypothetical protein RSal33209_0305 5 None None None 163841249 Common - 3-deoxy-7-phosphoheptulonate synthase RSal33209_2514 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 163841701 Common - transporter, MFS superfamily RSal33209_2970 117 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 163841141 Common - hypothetical membrane protein RSal33209_2406 15 None None None 163839749 Common - IS994 RSal33209_1000 42 None None None 163840927 Common - DNA-directed RNA polymerase beta chain RSal33209_2186 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 163842137 Common rspA starvation sensing protein RSal33209_3418 102 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 163840033 Common - putative acetyltransferase RSal33209_1287 15 COG0456 RimI, Acetyltransferases General function prediction only 163841106 Common - AFG1-family ATPase RSal33209_2371 101 COG1485 COG1485, Predicted ATPase General function prediction only 163840523 Common - aspartate aminotransferase RSal33209_1779 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 163841928 Common - inosine-uridine preferring nucleoside hydrolase RSal33209_3202 85 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 163842160 Common - transcriptional regulator, TetR family RSal33209_3442 32 COG1309 AcrR, Transcriptional regulator Transcription 163839949 Pathogen - hypothetical protein RSal33209_1202 1 None None None 163841944 Common - putative secreted protein RSal33209_3218 17 None None None 163838927 Common - disaccharide-binding protein RSal33209_0162 115 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163838969 Common - Na+/solute symporter RSal33209_0204 72 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 163841259 Common parA.1 chromosome partitioning protein RSal33209_2524 173 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163841103 Common - hypothetical protein RSal33209_2368 4 None None None 163839762 Common - ABC transporter, NBP/MSD fusion protein RSal33209_1013 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163840070 Common - formamidase RSal33209_1324 146 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 163838877 Pathogen - ABC-type sugar transport system, permease component RSal33209_0112 1 COG4209 LplB, ABC-type polysaccharide transport system, permease component Carbohydrate transport and metabolism 163840653 Common - acriflavin resistance plasma membrane protein RSal33209_1911 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 163839413 Common - ribosome-binding factor A RSal33209_0657 146 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 163839687 Common - hypothetical membrane protein RSal33209_0937 2 None None None 163840901 Common - LSU ribosomal protein L22P RSal33209_2160 217 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 163841155 Common - cytochrome d ubiquinol oxidase subunit I RSal33209_2420 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 163838941 Common - glutaryl-CoA dehydrogenase RSal33209_0176 154 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163839576 Common - hypothetical protein RSal33209_0823 2 None None None 163839716 Common - acetyltransferase RSal33209_0966 16 COG0456 RimI, Acetyltransferases General function prediction only 163839441 Common - hypothetical protein RSal33209_0685 15 COG3222 COG3222, Uncharacterized protein conserved in bacteria Function unknown 163839113 Common - DNA helicase II RSal33209_0349 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 163839860 Common - type IV secretion protein RSal33209_1113 7 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 163840810 Pathogen - hypothetical protein RSal33209_2069 1 None None None 163840259 Common - transcriptional regulator, AsnC family RSal33209_1514 12 COG1522 Lrp, Transcriptional regulators Transcription 163841996 Common - hypothetical protein RSal33209_3273 14 COG5373 COG5373, Predicted membrane protein Function unknown 163840518 Common - formamidopyrimidine-DNA glycosylase RSal33209_1774 179 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 163838823 Pathogen - hypothetical membrane protein RSal33209_0057 2 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 163839659 Common - predicted sugar kinase RSal33209_0907 163 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163841269 Common - cyclohexanone monooxygenase RSal33209_2534 31 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 163841133 Common - amino acid permease RSal33209_2398 43 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 163841240 Common oppA.5 oligopeptide-binding protein RSal33209_2505 77 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163842255 Common - transcriptional regulator RSal33209_3537 123 COG1609 PurR, Transcriptional regulators Transcription 163841187 Common - putative acetyltransferase RSal33209_2452 6 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163840009 Common - preprotein translocase YidC subunit RSal33209_1263 75 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 163840418 Common - tRNA methyl transferase RSal33209_1673 213 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 163840423 Common - shikimate 5-dehydrogenase RSal33209_1678 207 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 163839100 Common - exopolyphosphatase RSal33209_0335 180 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 163841708 Common - hypothetical protein RSal33209_2977 5 None None None 163839122 Common - sugar kinase RSal33209_0358 22 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163839738 Common - LSU ribosomal protein L1P RSal33209_0989 241 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 163840815 Common - acyl-coenzyme A oxidase RSal33209_2074 123 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163839201 Pathogen - hypothetical protein RSal33209_0441 1 None None None 163841300 Pathogen - hypothetical protein RSal33209_2565 1 None None None 163841008 Common - luciferase-like monooxygenase RSal33209_2268 102 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 163840439 Common - carboxylate-amine ligase RSal33209_1694 70 COG2170 COG2170, Uncharacterized conserved protein Function unknown 163839105 Common - alpha/beta hydrolase superfamily RSal33209_0341 41 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163842196 Common - hypothetical protein RSal33209_3478 62 COG3496 COG3496, Uncharacterized conserved protein Function unknown 163839504 Common - 23S rRNA methyltransferase RSal33209_0748 172 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 163842027 Common - hypothetical membrane spanning protein RSal33209_3305 18 None None None 163841710 Common - signal peptidase I RSal33209_2979 19 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 163840114 Pathogen - hypothetical protein RSal33209_1368 1 None None None 163841971 Common - glutamate 5-kinase RSal33209_3246 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 163839242 Common - transcriptional regulator, LacI family RSal33209_0483 127 COG1609 PurR, Transcriptional regulators Transcription 163840432 Pathogen - serine protease, trypsin family RSal33209_1687 1 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163839890 Common - GTPase RSal33209_1143 59 COG1162 COG1162, Predicted GTPases General function prediction only 163841715 Common - UDP-glucose 6-dehydrogenase RSal33209_2984 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 163841073 Common - indole-3-glycerol phosphate synthase RSal33209_2334 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 163840138 Common - transcriptional regulator, TetR family protein RSal33209_1392 36 COG1309 AcrR, Transcriptional regulator Transcription 163841525 Common - transcription regulator, crp family RSal33209_2791 170 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 163842234 Pathogen - hypothetical protein RSal33209_3516 1 None None None 163840062 Common - carboxypeptidase G2 precursor RSal33209_1316 57 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163839499 Common - transcriptional regulator, TetR family RSal33209_0743 20 COG1309 AcrR, Transcriptional regulator Transcription 163840684 Common - hypothetical protein RSal33209_1942 2 None None None 163839491 Common - histidinol-phosphate aminotransferase RSal33209_0735 226 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 163840765 Common - hypothetical protein RSal33209_2023 18 None None None 163841564 Common - transcriptional regulator, TetR family RSal33209_2831 9 COG1309 AcrR, Transcriptional regulator Transcription 163839883 Common - transcriptional regulator, AsnC family RSal33209_1136 150 COG1522 Lrp, Transcriptional regulators Transcription 163840620 Pathogen - transcriptional regulator, MarR family RSal33209_1878 1 None None None 163842094 Common - phosphoribosylformylglycinamidine synthase RSal33209_3375 231 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 163841781 Common greA transcription elongation factor RSal33209_3051 204 COG0782 GreA, Transcription elongation factor Transcription 163842210 Pathogen - hypothetical protein RSal33209_3492 1 None None None 163841939 Common - dihydropteroate synthase RSal33209_3213 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 163841171 Common - hypothetical protein RSal33209_2436 5 None None None 163841679 Common - adenylate cyclase RSal33209_2948 33 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 163841532 Pathogen - peptidoglycan binding protein RSal33209_2798 1 None None None 163839297 Common - sensor kinase RSal33209_0539 102 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 163839290 Common - ribosome recycling factor RSal33209_0532 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 163839991 Pathogen - serine protease, trypsin family RSal33209_1245 1 None None None 163840953 Common - transporter, MFS superfamily RSal33209_2212 14 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 163840002 Common - transcriptional regulator, AsnC family RSal33209_1256 110 COG1522 Lrp, Transcriptional regulators Transcription 163839626 Common - alanine racemase RSal33209_0874 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 163840167 Common - hypothetical protein RSal33209_1422 3 COG3976 COG3976, Uncharacterized protein conserved in bacteria Function unknown 163841589 Common - multidrug resistance protein B RSal33209_2856 7 None None None 163841065 Common - transcriptional regulator RSal33209_2326 223 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 163840449 Common - sugar transport system permease RSal33209_1704 138 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841916 Common - acylamino-acid-releasing enzyme RSal33209_3190 66 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163841722 Common - ABC transporter ATP-binding protein RSal33209_2992 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 163839043 Common nodJ.1 ABC-2 type transporter RSal33209_0278 30 None None None 163839109 Common - hypothetical membrane protein RSal33209_0345 2 None None None 163841180 Common - NADP-dependent malic enzyme RSal33209_2445 184 COG0281 SfcA, Malic enzyme Energy production and conversion 163839913 Common - hypothetical membrane protein RSal33209_1166 5 None None None 163840587 Common - acetyl-coenzyme A synthetase RSal33209_1845 21 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 163838950 Common - transcriptional regulator, LysR family RSal33209_0185 138 COG0583 LysR, Transcriptional regulator Transcription 163839868 Common - IS994 RSal33209_1121 39 None None None 163839698 Common - ABC transporter ATP-binding protein RSal33209_0948 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163841031 Common terC tellurium resistance protein RSal33209_2291 90 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 163840092 Common - lysozyme M1 RSal33209_1346 5 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 163839188 Common - alpha-amylase family protein RSal33209_0425 82 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163841947 Common - hypothetical cytosolic protein RSal33209_3221 27 COG5282 COG5282, Uncharacterized conserved protein Function unknown 163840644 Pathogen - hypothetical membrane protein RSal33209_1902 1 None None None 163838933 Common - transcriptional regulator, ArsR family RSal33209_0168 32 COG3832 COG3832, Uncharacterized conserved protein Function unknown 163840044 Common - short-chain dehydrogenase RSal33209_1298 86 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163841221 Common - antigen 84 RSal33209_2486 22 COG5373 COG5373, Predicted membrane protein Function unknown 163840066 Common - LysE family efflux protein RSal33209_1320 97 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 163839028 Common - L-arabinose transport system permease protein RSal33209_0263 110 COG4214 XylH, ABC-type xylose transport system, permease component Carbohydrate transport and metabolism 163842242 Common - LSU ribosomal protein L9P RSal33209_3524 213 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 163838904 Common - peptide synthetase RSal33209_0139 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163841924 Common - lysyl-tRNA synthetase RSal33209_3198 242 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 163839093 Common mazG MazG RSal33209_0328 154 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 163841521 Common - transporter RSal33209_2787 150 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841432 Common - 1,2-alpha-L-fucosidase RSal33209_2698 16 None None None 163838779 Common - hypothetical membrane protein RSal33209_0012 2 None None None 163841712 Pathogen - hypothetical protein RSal33209_2981 2 None None None 163841868 Common - 1-phosphofructokinase RSal33209_3141 90 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 163841898 Common - low-affinity inorganic phosphate transporter RSal33209_3172 132 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 163839802 Common - two-component response regulator, LuxR family RSal33209_1055 211 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163841841 Common - O-methyltransferase RSal33209_3114 12 None None None 163839717 Common glnR.1 transcriptional regulatory protein RSal33209_0967 7 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163838770 Common dnaA chromosomal replication initiator protein RSal33209_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 163841290 Common - quinone oxidoreductase RSal33209_2555 138 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163839021 Pathogen - hypothetical protein RSal33209_0256 1 None None None 163840124 Common - cysteine desulfurase RSal33209_1378 2 None None None 163842006 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_3283 187 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 163841228 Common - UDP-N-acetylmuramate--alanine ligase RSal33209_2493 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 163841373 Common - isochorismate synthase RSal33209_2639 222 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163839614 Common - cell wall hydrolase RSal33209_0862 5 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 163840616 Common tetP.2 tetracycline resistance protein RSal33209_1874 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 163840013 Common - trypsin-like serine protease RSal33209_1267 220 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 163842119 Pathogen - hypothetical protein RSal33209_3400 1 None None None 163839323 Common - IS994 RSal33209_0565 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841576 Common - metallo-beta-lactamase superfamily protein RSal33209_2843 37 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 163841635 Common - IS994 RSal33209_2903 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841891 Common - D-ribose-binding protein RSal33209_3164 83 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163841122 Common dpiB.1 sensor kinase RSal33209_2387 60 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 163841067 Common - glutamate synthase [NADPH] small chain RSal33209_2328 205 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 163840289 Common - transcriptional regulator, HTH domain RSal33209_1544 89 COG2378 COG2378, Predicted transcriptional regulator Transcription 163839477 Common - hypothetical cytosolic protein RSal33209_0721 15 None None None 163841060 Common dppB.6 dipeptide transport system permease protein RSal33209_2320 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840713 Common - protein translation elongation factor P (EF-P) RSal33209_1971 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 163842011 Common - NAD dependent epimerase/dehydratase RSal33209_3288 25 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163841936 Common - hypothetical protein RSal33209_3210 3 None None None 163841304 Common - short chain dehydrogenase RSal33209_2570 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 163838863 Common - fosfomycin resistance protein RSal33209_0098 22 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 163840991 Common - 6-phosphogluconolactonase RSal33209_2251 104 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 163841260 Pathogen - hypothetical protein RSal33209_2525 1 None None None 163840459 Common - myo-inositol-1-phosphate synthase RSal33209_1714 53 COG1260 INO1, Myo-inositol-1-phosphate synthase Lipid metabolism 163840023 Common - flavoprotein involved in K+ transport RSal33209_1277 37 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 163838831 Common - hypothetical protein RSal33209_0066 11 COG3832 COG3832, Uncharacterized conserved protein Function unknown 163839731 Common - IS994 RSal33209_0981 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841982 Common - dihydrofolate synthase RSal33209_3257 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 163839602 Common - macrolide-efflux protein RSal33209_0849 13 None None None 163841255 Common - ATPases involved in chromosome partitioning RSal33209_2520 10 None None None 163841164 Common - hypothetical cytosolic protein RSal33209_2429 20 COG1938 COG1938, Archaeal enzymes of ATP-grasp superfamily General function prediction only 163839999 Common - hypothetical protein RSal33209_1253 3 None None None 163839037 Common - tetrahydrofolate dehydrogenase/cyclohydrolase RSal33209_0272 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 163839388 Common - IS994 RSal33209_0632 38 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840469 Common - serine hydroxymethyltransferase RSal33209_1724 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 163840607 Common - hypothetical protein RSal33209_1865 2 None None None 163840284 Common - IS994 RSal33209_1539 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842212 Common - IS994 RSal33209_3494 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838802 Pathogen - hypothetical membrane protein RSal33209_0036 1 None None None 163840048 Common - 2-amino-3-ketobutyrate coenzyme A ligase RSal33209_1302 193 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 163841703 Common - 3-hydroxyisobutyrate dehydrogenase RSal33209_2972 175 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 163839319 Common - 8-amino-7-oxononanoate synthase RSal33209_0561 9 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 163841057 Common - oligopeptide transport ATP-binding protein RSal33209_2317 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840623 Common - aldo/keto reductase RSal33209_1881 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163838834 Pathogen - hypothetical protein RSal33209_0069 1 None None None 163840503 Common - ABC transporter ATP-binding and permease protein RSal33209_1759 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163841741 Common - adenosylhomocysteinase RSal33209_3011 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 163839317 Pathogen - hypothetical membrane protein RSal33209_0559 1 None None None 163840491 Common - UDP-glucose 4-epimerase RSal33209_1747 8 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163840238 Common smc.1 chromosome partition protein RSal33209_1493 31 COG4717 COG4717, Uncharacterized conserved protein Function unknown 163839794 Common - multidrug transporter, MFS family RSal33209_1047 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841850 Common - transcriptional regulator, LacI family RSal33209_3123 126 COG1609 PurR, Transcriptional regulators Transcription 163839278 Common - bicyclomycin resistance protein RSal33209_0519 81 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163839514 Pathogen - hypothetical protein RSal33209_0758 1 None None None 163842018 Common - ABC transporter ATP-binding protein RSal33209_3295 248 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 163839197 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase RSal33209_0437 3 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 163841962 Common - X-Pro dipeptidyl-peptidase (S15) family protein RSal33209_3236 12 COG2936 COG2936, Predicted acyl esterases General function prediction only 163840667 Common - coserved hypothetical protein RSal33209_1925 181 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 163840767 Common - amidohydrolase family RSal33209_2025 96 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 163840230 Common - short chain dehydrogenase RSal33209_1485 23 None None None 163839373 Common - IS994 RSal33209_0616 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841760 Common - hypothetical protein RSal33209_3030 4 None None None 163839927 Common - succinyl-diaminopimelate desuccinylase RSal33209_1180 181 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163839976 Common - ABC transporter substrate-binding protein RSal33209_1229 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 163840984 Common - heme O monooxygenase RSal33209_2244 54 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 163841267 Common - transglycosylase family protein RSal33209_2532 12 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 163839623 Common - putative amidohydrolase RSal33209_0871 181 COG0388 COG0388, Predicted amidohydrolase General function prediction only 163841019 Common - excinuclease ABC, A subunit RSal33209_2279 235 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 163839097 Common - Enolase RSal33209_0332 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 163841234 Common - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase RSal33209_2499 212 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 163838836 Common - hypothetical protein RSal33209_0071 25 COG4549 COG4549, Uncharacterized protein conserved in bacteria Function unknown 163840081 Common - dyp-type peroxidase family protein RSal33209_1335 15 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 163840467 Common - glycine cleavage system T protein RSal33209_1722 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 163840563 Common - GMC family oxidoreductase RSal33209_1821 86 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 163840301 Common - dihydrodipicolinate synthase RSal33209_1556 207 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 163839876 Common - NADPH-dependent oxidoreductase RSal33209_1129 183 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163840793 Common - peptidase M20/M25/M40 family RSal33209_2051 189 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163840534 Common - 3-isopropylmalate dehydratase large subunit RSal33209_1790 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 163839639 Common rtcB RtcB RSal33209_0887 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 163841855 Common - hypothetical membrane protein RSal33209_3128 49 COG2733 COG2733, Predicted membrane protein Function unknown 163841453 Pathogen - tetratricopeptide repeat domain protein RSal33209_2719 1 None None None 163838944 Pathogen - 3-hydroxyacyl-CoA dehydrogenase RSal33209_0179 1 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 163839722 Common - acetyltransferase RSal33209_0972 4 None None None 163840173 Common - diaminopimelate decarboxylase RSal33209_1428 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 163841571 Common - multidrug resistance protein B RSal33209_2838 194 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163839115 Common - hypothetical membrane protein RSal33209_0351 2 None None None 163841461 Common - pyrroline-5-carboxylate reductase RSal33209_2727 206 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 163840975 Common - conserved hypothetical protein, DUF59 RSal33209_2235 104 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 163840290 Common - endo-beta-N-acetylglucosaminidase H precursor RSal33209_1545 9 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 163840197 Common - N-acetylglucosamine-6-phosphate deacetylase RSal33209_1452 122 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 163838859 Common - fructokinase RSal33209_0094 119 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163839509 Common - radical SAM superfamily protein RSal33209_0753 39 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 163840039 Pathogen - serine protease, trypsin family RSal33209_1293 1 None None None 163840853 Common - PAP2 superfamily protein RSal33209_2112 8 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 163840954 Common - hypothetical protein RSal33209_2213 7 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 163840032 Common - chaperone protein DnaJ domain, putative RSal33209_1286 211 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 163842068 Pathogen - hypothetical protein RSal33209_3349 1 None None None 163839569 Common - ADP-ribose pyrophosphatase RSal33209_0816 75 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 163839675 Common - ATP-dependent RNA helicase RSal33209_0923 246 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 163840516 Common - IS994 RSal33209_1772 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842105 Pathogen - hypothetical protein RSal33209_3386 1 None None None 163841818 Common - hypothetical protein RSal33209_3088 2 None None None 163840635 Common - hypothetical protein RSal33209_1893 2 None None None 163840341 Common - lipase/acylhydrolase with GDSL-like motif RSal33209_1596 18 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 163839390 Common - predicted permease RSal33209_0634 9 None None None 163839744 Common - LSU ribosomal protein L12P (L7/L12) RSal33209_0995 135 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 163841209 Common - polyphosphate ATP-glucomannokinase RSal33209_2474 43 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163838850 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_0085 229 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840698 Common - S-adenosylmethionine synthetase RSal33209_1956 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 163841416 Common - 2-hydroxyphenylacetyl-CoA ring opening enzyme RSal33209_2682 3 None None None 163841887 Common - transcriptional regulator, ArsR family RSal33209_3160 28 COG0640 ArsR, Predicted transcriptional regulators Transcription 163842121 Common - haloacid dehalogenase-like hydrolase RSal33209_3402 105 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 163840416 Common - dipeptide-binding protein RSal33209_1671 50 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163841800 Common - NH(3)-dependent NAD(+) synthetase RSal33209_3070 208 COG0171 NadE, NAD synthase Coenzyme metabolism 163841717 Common - LSU ribosomal protein L25P RSal33209_2986 172 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 163840903 Common - LSU ribosomal protein L2P RSal33209_2162 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 163841794 Pathogen - IS994 RSal33209_3064 1 None None None 163841641 Common - glucan endo-1,3-beta-glucosidase RSal33209_2910 40 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 163841504 Common - NAD-dependent oxidoreductase RSal33209_2770 184 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163840611 Pathogen - hypothetical protein RSal33209_1869 1 COG5373 COG5373, Predicted membrane protein Function unknown 163841481 Common - ATP-dependent helicase RSal33209_2747 164 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 163841942 Pathogen - hypothetical protein RSal33209_3216 1 None None None 163839269 Common - formate dehydrogenase alpha subunit RSal33209_0510 6 None None None 163841459 Common ktrB potassium uptake protein RSal33209_2725 108 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 163841884 Common - integral membrane protein RSal33209_3157 8 None None None 163839217 Pathogen - ABC-type multidrug transporter RSal33209_0458 1 None None None 163839407 Common - hypothetical membrane protein RSal33209_0651 2 COG5373 COG5373, Predicted membrane protein Function unknown 163839368 Common - dioxygenase RSal33209_0611 3 None None None 163841655 Common - oxidoreductase RSal33209_2924 3 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 163842169 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase RSal33209_3451 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 163839830 Common rimM 16S rRNA processing protein RSal33209_1083 122 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 163841763 Common - transcriptional regulator, TetR family RSal33209_3033 24 COG1309 AcrR, Transcriptional regulator Transcription 163841131 Common - HNH endonuclease domain protein RSal33209_2396 7 None None None 163840890 Common - LSU ribosomal protein L6P RSal33209_2149 245 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 163839341 Common - transcriptional regulator, TetR family RSal33209_0583 19 None None None 163839548 Pathogen - hypothetical protein RSal33209_0792 1 None None None 163838817 Common - putative two component sensor kinase RSal33209_0051 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 163839252 Pathogen - hypothetical protein RSal33209_0493 1 None None None 163838807 Pathogen - hypothetical protein RSal33209_0041 1 None None None 163839520 Common - arabinose efflux permease RSal33209_0764 82 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841807 Common - transcriptional regulator, LacI family RSal33209_3077 48 COG1609 PurR, Transcriptional regulators Transcription 163840651 Common dnaK chaperone protein RSal33209_1909 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 163841445 Common - hypothetical protein RSal33209_2711 2 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 163840006 Common - deoxyribodipyrimidine photolyase RSal33209_1260 92 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 163840107 Common - hypothetical protein RSal33209_1361 10 COG3336 COG3336, Predicted membrane protein Function unknown 163839383 Pathogen - hypothetical membrane protein RSal33209_0627 1 None None None 163839589 Common - gluconate transporter RSal33209_0836 58 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 163840917 Common - gluconate transporter RSal33209_2176 78 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 163839176 Common - isoamylase RSal33209_0413 144 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 163840701 Common - guanylate kinase RSal33209_1959 213 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 163840214 Common clpS ATP-dependent Clp protease adaptor protein RSal33209_1469 18 COG2127 COG2127, Uncharacterized conserved protein Function unknown 163839807 Common - 3-isopropylmalate dehydrogenase RSal33209_1060 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 163839063 Common - acetyltransferase, GNAT family RSal33209_0298 87 COG2153 ElaA, Predicted acyltransferase General function prediction only 163840972 Common - dipeptidyl aminopeptidases/acylaminoacyl-peptidase RSal33209_2232 32 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163839453 Common - dihydrodipicolinate reductase RSal33209_0697 213 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 163839474 Common cinA competence-damage protein RSal33209_0718 193 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 163840841 Common - hypothetical protein RSal33209_2100 8 None None None 163840267 Pathogen - hypothetical protein RSal33209_1522 1 None None None 163840758 Pathogen - hypothetical protein RSal33209_2016 1 None None None 163840328 Common - cytochrome c oxidase, subunit I RSal33209_1583 162 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 163841310 Common - ABC transporter permease protein RSal33209_2576 167 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 163840168 Common - transporter, MFS superfamily RSal33209_1423 17 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 163841323 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase RSal33209_2589 135 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 163841381 Pathogen - hypothetical protein RSal33209_2647 1 None None None 163840297 Common - gram positive anchor domain protein RSal33209_1552 73 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 163839770 Common - hydrolase, alpha/beta fold superfamily RSal33209_1021 26 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 163839003 Common - transcriptional regulator, RpiR family RSal33209_0238 17 COG1737 RpiR, Transcriptional regulators Transcription 163841467 Pathogen - hypothetical protein RSal33209_2733 1 None None None 163838966 Common - hypothetical membrane protein RSal33209_0201 55 COG1814 COG1814, Uncharacterized membrane protein Function unknown 163839483 Common - tRNA delta(2)-isopentenylpyrophosphate transferase RSal33209_0727 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 163841648 Pathogen - hypothetical protein RSal33209_2917 1 None None None 163841352 Common - sulfate adenylyltransferase subunit 2 RSal33209_2618 136 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 163841452 Common - transcriptional regulator, LuxR family RSal33209_2718 28 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163841447 Common rex redox-sensitive transcriptional regulator RSal33209_2713 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 163840998 Common - ABC transporter amino acid-binding protein RSal33209_2258 25 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163841024 Common - putative transcriptional regulator, MarR family RSal33209_2284 44 COG1846 MarR, Transcriptional regulators Transcription 163839357 Common - aldehyde dehydrogenase RSal33209_0599 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163838879 Common - ABC-type sugar transport system, permease component RSal33209_0114 5 COG4209 LplB, ABC-type polysaccharide transport system, permease component Carbohydrate transport and metabolism 163840481 Common - SSU ribosomal protein S9P RSal33209_1736 233 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 163839082 Common - nucleoside transport system permease protein RSal33209_0317 106 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 163839797 Common - transcriptional regulator, ArsR family RSal33209_1050 50 COG0640 ArsR, Predicted transcriptional regulators Transcription 163838813 Common sixA phosphohistidine phosphatase RSal33209_0047 68 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 163839014 Common livH.2 branched-chain amino acid transport system permease protein RSal33209_0249 97 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 163841873 Common hpr phosphocarrier protein RSal33209_3146 17 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 163839950 Common - ATPases involved in chromosome partitioning RSal33209_1203 18 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163840353 Common - IS994 RSal33209_1608 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841434 Common - naphthoate synthase RSal33209_2700 175 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 163842225 Common - universal stress protein family RSal33209_3507 7 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 163841003 Common - alkanesulfonate monooxygenase RSal33209_2263 61 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 163840782 Common - tRNA (adenine-N(1)-)-methyltransferase RSal33209_2040 60 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 163839642 Common - hypothetical protein RSal33209_0890 13 None None None 163842269 Common parB chromosome partitioning protein RSal33209_3551 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 163840112 Pathogen - hypothetical protein RSal33209_1366 1 None None None 163839069 Common - mannose-1-phosphate guanylyltransferase RSal33209_0304 161 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 163839224 Common - hypothetical protein RSal33209_0465 21 None None None 163841729 Common - hypothetical protein RSal33209_2999 29 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 163841075 Common - hypothetical membrane protein RSal33209_2336 2 None None None 163841530 Common - phosphoesterase RSal33209_2796 49 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 163841428 Common - asparagine synthetase (glutamine-hydrolyzing) RSal33209_2694 45 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 163841756 Common - mannose-6-phosphate isomerase RSal33209_3026 41 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 163839707 Common - dihydrofolate reductase RSal33209_0957 145 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 163841652 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase RSal33209_2921 52 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 163842253 Common - IS994 RSal33209_3535 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839012 Common - leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein RSal33209_0247 117 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 163839624 Common - agmatine deiminase RSal33209_0872 88 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 163841400 Common - hypothetical protein RSal33209_2666 2 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163842079 Common - aspartokinase RSal33209_3360 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 163841338 Common - 4-aminobutyrate aminotransferase RSal33209_2604 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 163840445 Common - alanine racemase RSal33209_1700 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 163842129 Common - sugar transport system periplasmic component RSal33209_3410 91 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163839429 Common - peptidase, M16 family RSal33209_0673 200 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 163839460 Common - epoxide hydrolase RSal33209_0704 52 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163841287 Common - heme transport associated protein RSal33209_2552 8 None None None 163839567 Common - carbohydrate binding domain protein RSal33209_0814 28 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 163839611 Pathogen - hypothetical protein RSal33209_0858 1 None None None 163839574 Common - hypothetical protein RSal33209_0821 2 None None None 163839355 Pathogen - hypothetical membrane protein RSal33209_0597 1 COG1520 COG1520, FOG: WD40-like repeat Function unknown 163841537 Common - hypothetical ATPase RSal33209_2803 12 None None None 163839343 Common - sorbitol/mannitol transport inner membrane protein RSal33209_0585 96 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163842223 Common - hypothetical membrane spanning protein RSal33209_3505 82 COG1738 COG1738, Uncharacterized conserved protein Function unknown 163839815 Common - IS994 RSal33209_1068 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839680 Pathogen - secretory lipase RSal33209_0930 3 None None None 163840558 Common - opine oxidase RSal33209_1816 92 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 163840674 Common - hypothetical protein RSal33209_1932 11 None None None 163839378 Common - transcriptional regulator, PadR-like family RSal33209_0622 33 COG1695 COG1695, Predicted transcriptional regulators Transcription 163842058 Common - N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase (delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valinesynthetase) RSal33209_3338 75 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163842053 Common - IS994 RSal33209_3333 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842092 Pathogen - hypothetical protein RSal33209_3373 1 None None None 163841211 Common - hypothetical protein RSal33209_2476 10 None None None 163839919 Common - spectinomycin-efflux protein RSal33209_1172 5 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 163839942 Common - hypothetical protein RSal33209_1195 17 COG4420 COG4420, Predicted membrane protein Function unknown 163840521 Common - hypothetical protein RSal33209_1777 54 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 163841199 Common - 3-methyl-2-oxobutanoate hydroxymethyltransferase RSal33209_2464 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 163841022 Common - ABC transporter ATP binding protein RSal33209_2282 13 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163839240 Pathogen - hypothetical protein RSal33209_0481 1 None None None 163841618 Common - phytoene dehydrogenase-like protein RSal33209_2885 50 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163838984 Common - hypothetical protease RSal33209_0219 8 None None None 163840773 Common - hypothetical protein RSal33209_2031 77 COG2378 COG2378, Predicted transcriptional regulator Transcription 163839522 Pathogen - hypothetical protein RSal33209_0766 1 None None None 163839754 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase RSal33209_1005 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 163840961 Common - hypothetical protein RSal33209_2221 6 None None None 163842112 Common - hypothetical cytosolic protein RSal33209_3393 14 None None None 163839207 Pathogen - hypothetical protein RSal33209_0447 1 None None None 163842272 Common jag Jag protein RSal33209_3554 61 COG1847 Jag, Predicted RNA-binding protein General function prediction only 163839751 Common - ABC transporter, permease protein RSal33209_1002 22 COG4721 COG4721, Predicted membrane protein Function unknown 163841552 Common - hypothetical protein RSal33209_2819 29 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 163841974 Common - LSU ribosomal protein L21P RSal33209_3249 201 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 163840175 Common - threonine synthase RSal33209_1430 184 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 163838909 Common - metalloendopeptidase RSal33209_0144 2 None None None 163841643 Common - two-component response regulator RSal33209_2912 175 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163840665 Common - PhoH-like protein RSal33209_1923 183 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 163840938 Common - YbaK/prolyl-tRNA synthetases associated domain RSal33209_2197 95 COG2606 EbsC, Uncharacterized conserved protein Function unknown 163840199 Common - hypothetical protein RSal33209_1454 54 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 163838918 Common - hypothetical protein RSal33209_0153 2 None None None 163842258 Common - NAD-dependent epimerase/dehydratase RSal33209_3540 57 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 163842150 Common - cystine-binding protein RSal33209_3432 155 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163840243 Common - phenol 2-monooxygenase small subunit RSal33209_1498 6 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 163839081 Common - nucleoside transport ATP-binding protein RSal33209_0316 85 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 163839247 Common - DNA/RNA helicase (DEAD/DEAH box family) RSal33209_0488 67 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 163839397 Common - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase RSal33209_0641 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 163840205 Common - integral membrane transport protein RSal33209_1460 5 None None None 163840977 Common - Rieske-type ferredoxin RSal33209_2237 56 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 163841090 Common - ribulose-phosphate 3-epimerase RSal33209_2351 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 163839417 Common - hypothetical membrane protein RSal33209_0661 5 None None None 163839747 Common - ABC-type sugar transport system, permease component RSal33209_0998 140 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163841469 Common - two-component response regulator RSal33209_2735 74 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163840551 Common - Xaa-Pro aminopeptidase RSal33209_1809 118 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 163839826 Common - acetyltransferase RSal33209_1079 5 COG3153 COG3153, Predicted acetyltransferase General function prediction only 163841365 Common - hypothetical membrane spanning protein RSal33209_2631 133 COG2860 COG2860, Predicted membrane protein Function unknown 163839434 Common - molybdenum cofactor biosynthesis protein A RSal33209_0678 195 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 163839874 Pathogen - hypothetical protein RSal33209_1127 1 None None None 163839110 Common - DsbA oxidoreductase RSal33209_0346 73 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 163841905 Common - DNA-binding protein RSal33209_3179 28 COG1623 COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) General function prediction only 163840212 Common - nicotinamidase RSal33209_1467 107 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 163838866 Common - lipase/esterase RSal33209_0101 52 COG0657 Aes, Esterase/lipase Lipid metabolism 163840593 Common - malonate-semialdehyde dehydrogenase (acetylating) RSal33209_1851 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163839034 Common - monoxygenase RSal33209_0269 100 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 163839833 Common - signal peptidase I RSal33209_1086 133 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 163840253 Common - probable serine/threonine protein kinase RSal33209_1508 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 163841247 Common - serine/threonine protein kinase RSal33209_2512 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 163841423 Common - 3-hydroxybutyryl-CoA dehydratase RSal33209_2689 170 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 163839134 Common - IS994 RSal33209_0370 41 None None None 163840219 Common - xanthosine triphosphate pyrophosphatase RSal33209_1474 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 163840350 Common - iron permease FTR1 family RSal33209_1605 94 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 163839924 Common - UDP-glucose 4-epimerase RSal33209_1177 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 163838844 Common - ribosomal pseudouridine synthase RSal33209_0079 210 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 163839938 Common - RNA polymerase sigma-E factor RSal33209_1191 172 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 163839710 Common - transcriptional regulator, GntR family RSal33209_0960 130 COG1725 COG1725, Predicted transcriptional regulators Transcription 163841835 Pathogen - hypothetical protein RSal33209_3108 1 None None None 163841150 Common vanW vancomycin B-type resistance protein RSal33209_2415 37 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 163839899 Common - hypothetical protein RSal33209_1152 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 163839809 Common - fumarylacetoacetate hydrolase family protein RSal33209_1062 180 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 163841601 Common - hypothetical protein RSal33209_2868 2 None None None 163838784 Common - hydrolase RSal33209_0017 12 None None None 163839158 Common phnE phosphonates transport system permease protein RSal33209_0395 84 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 163840505 Common - glycerol-3-phosphate dehydrogenase RSal33209_1761 31 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 163839866 Common msa2 cell surface protein RSal33209_1119 21 None None None 163841115 Common - short chain dehydrogenase RSal33209_2380 7 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163840875 Common - sterol carrier protein X RSal33209_2134 9 None None None 163839885 Common - ATPase family protein RSal33209_1138 52 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 163840136 Common - lipase/acylhydrolase with GDSL-like motif RSal33209_1390 10 None None None 163842063 Common - hypothetical protein RSal33209_3343 4 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 163839502 Common - LSU ribosomal protein L35P RSal33209_0746 177 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 163839293 Common - sodium/proline transporter RSal33209_0535 80 COG4147 DhlC, Predicted symporter General function prediction only 163840185 Common - hypothetical protein RSal33209_1440 2 None None None 163841670 Common - ABC transporter ATP-binding protein RSal33209_2939 25 COG4637 COG4637, Predicted ATPase General function prediction only 163840477 Common - pantothenate kinase RSal33209_1732 75 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 163839166 Common - hypothetical protein RSal33209_0403 14 None None None 163842249 Common - dipeptide transport system permease protein RSal33209_3531 210 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841953 Pathogen - hypothetical protein RSal33209_3227 1 None None None 163839053 Common - histidine kinase RSal33209_0288 88 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163842130 Common - sugar transport system permease protein RSal33209_3411 143 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163839532 Common - hypothetical protein RSal33209_0776 9 None None None 163842029 Common - peptide deformylase RSal33209_3308 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 163839497 Common - transporter, MFS superfamily RSal33209_0741 31 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841501 Common - acetyl-coenzyme A synthetase RSal33209_2767 178 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 163840839 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_2098 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840599 Common - phosphoribosylamidoimidazole-succinocarboxamide synthase RSal33209_1857 156 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 163841120 Common - 3-hydroxyacyl-CoA dehydrogenase RSal33209_2385 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 163841964 Common - FAD-dependent monooxygenase RSal33209_3238 117 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163841331 Common - C4-dicarboxylate transport protein RSal33209_2597 156 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 163840752 Common - phosphatidylinositol synthase RSal33209_2010 56 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 163841399 Common - hypothetical protein RSal33209_2665 2 None None None 163841472 Pathogen - hypothetical protein RSal33209_2738 1 None None None 163841299 Common - internally conserved protein RSal33209_2564 23 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 163841055 Common - amidase RSal33209_2315 211 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 163841680 Common - hypothetical protein RSal33209_2949 8 COG3428 COG3428, Predicted membrane protein Function unknown 163841914 Common - hypothetical protein RSal33209_3188 3 None None None 163839263 Common - predicted molybdopterin-guanine dinucleotide biosynthesis protein A RSal33209_0504 3 None None None 163839102 Common - NADH dehydrogenase RSal33209_0337 148 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 163839087 Common - thymidine phosphorylase RSal33209_0322 147 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 163841613 Common - N-acetylglucosamine/diacetylchitobiose-binding protein RSal33209_2880 6 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163842185 Common - 16S rRNA m(2)G 966 methyltransferase RSal33209_3467 75 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 163840585 Common - glyoxalase family protein RSal33209_1843 38 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 163839858 Common - ISRs2 transposase RSal33209_1111 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840951 Common - potassium efflux system protein RSal33209_2210 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 163841844 Common - transcriptional regulator, TetR family RSal33209_3117 2 None None None 163842198 Common - cyclopropane-fatty-acyl-phospholipid synthase RSal33209_3480 130 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 163841189 Common glnP.1 glutamine transport permease protein RSal33209_2454 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 163839107 Common - ISRs2 transposase RSal33209_0343 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841592 Common - Fe3+-siderophore transport system permease RSal33209_2859 189 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 163841020 Common - transcriptional regulator, GntR family RSal33209_2280 14 COG1725 COG1725, Predicted transcriptional regulators Transcription 163840373 Common - hypothetical protein RSal33209_1628 4 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 163839295 Common - hypothetical protein RSal33209_0537 9 None None None 163840156 Common - trp repressor binding protein RSal33209_1410 42 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 163839140 Common - short chain dehydrogenase RSal33209_0376 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839584 Common - putative D-amino acid deaminase RSal33209_0831 54 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 163841185 Pathogen - hypothetical protein RSal33209_2450 1 None None None 163840072 Common - sialidase RSal33209_1326 14 None None None 163840796 Common - glucan endo-1,3-beta-glucosidase RSal33209_2055 6 None None None 163840808 Common pvcA pyoverdine biosynthesis protein RSal33209_2067 11 COG3207 DIT1, Pyoverdine/dityrosine biosynthesis protein Secondary metabolites biosynthesis, transport, and catabolism 163840963 Common - beta-lactamase domain protein RSal33209_2223 186 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 163840590 Common - enoyl-CoA hydratase RSal33209_1848 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 163842232 Common - transcriptional regulator, RpiR family RSal33209_3514 93 COG1737 RpiR, Transcriptional regulators Transcription 163839760 Common - O-succinylhomoserine sulfhydrylase RSal33209_1011 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 163839918 Common - spectinomycin-efflux protein RSal33209_1171 94 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 163841773 Common - type 4 prepilin-like proteins leader peptide processing enzyme RSal33209_3043 6 None None None 163839288 Common - hypothetical protein RSal33209_0530 9 COG3832 COG3832, Uncharacterized conserved protein Function unknown 163840948 Common phaE potassium efflux system protein RSal33209_2207 55 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 163840515 Common - IS994 RSal33209_1771 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842206 Common - hypothetical protein RSal33209_3488 31 COG2343 COG2343, Uncharacterized protein conserved in bacteria Function unknown 163841599 Common - zinc-dependent alcohol dehydrogenase RSal33209_2866 164 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 163840834 Common - SpoU rRNA methylase family protein RSal33209_2093 212 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 163838799 Common - gamma-glutamyltranspeptidase RSal33209_0032 145 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 163841173 Common - carboxymuconolactone decarboxylase family protein RSal33209_2438 74 COG2128 COG2128, Uncharacterized conserved protein Function unknown 163838828 Common - transcriptional regulator, AraC family RSal33209_0062 34 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 163838967 Common - hypothetical protein RSal33209_0202 2 None None None 163840937 Common - acetyl-CoA acetyltransferase RSal33209_2196 181 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163841195 Pathogen - hypothetical protein RSal33209_2460 1 None None None 163839670 Common - transcriptional regulator, ArsR family RSal33209_0918 4 COG0640 ArsR, Predicted transcriptional regulators Transcription 163838896 Common msa1 cell surface protein RSal33209_0131 21 None None None 163838821 Common - transcriptional regulator, MarR family RSal33209_0055 82 COG1846 MarR, Transcriptional regulators Transcription 163841990 Common - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase RSal33209_3265 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840421 Common - hypothetical protein RSal33209_1676 2 None None None 163840335 Common - putative lysophospholipase RSal33209_1590 31 COG2267 PldB, Lysophospholipase Lipid metabolism 163839301 Pathogen - hypothetical membrane protein RSal33209_0543 1 None None None 163840026 Common - hypothetical protein RSal33209_1280 8 COG5343 COG5343, Uncharacterized protein conserved in bacteria Function unknown 163839598 Common - catalase RSal33209_0845 167 COG0753 KatE, Catalase Inorganic ion transport and metabolism 163839851 Pathogen - hypothetical membrane protein RSal33209_1104 2 None None None 163841997 Pathogen - hypothetical protein RSal33209_3274 1 None None None 163841179 Common - hypothetical transporter (sulfate transport family) RSal33209_2444 19 None None None 163840393 Common - hypothetical membrane protein RSal33209_1648 41 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 163840004 Common - hypothetical protein RSal33209_1258 9 None None None 163838790 Common - esterase RSal33209_0023 134 COG0657 Aes, Esterase/lipase Lipid metabolism 163842038 Common - glyceraldehyde 3-phosphate dehydrogenase RSal33209_3317 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 163838921 Common - NAD-dependent oxidoreductase RSal33209_0156 93 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163840919 Common - oxidoreductase RSal33209_2178 41 COG0579 COG0579, Predicted dehydrogenase General function prediction only 163840721 Common - alanyl-tRNA synthetase RSal33209_1979 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163840271 Common - hypothetical protein RSal33209_1526 9 COG3358 COG3358, Uncharacterized conserved protein Function unknown 163841559 Common - potassium/proton antiporter RSal33209_2826 5 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 163841393 Common paaD phenylacetic acid degradation protein RSal33209_2659 47 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 163840550 Pathogen - hypothetical protein RSal33209_1808 1 None None None 163840021 Common - electron transfer flavoprotein alpha-subunit RSal33209_1275 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 163841170 Common - carboxypeptidase T precursor RSal33209_2435 16 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 163839125 Common iolD.1 IolD RSal33209_0361 162 COG3962 COG3962, Acetolactate synthase Amino acid transport and metabolism 163841918 Common - acylamino-acid-releasing enzyme RSal33209_3192 13 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163839855 Common - peroxiredoxin, AhpE-like protein RSal33209_1108 216 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 163841246 Common - putative endopeptidase lytE precursor RSal33209_2511 79 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 163841147 Common - acetyl-CoA synthetase RSal33209_2412 4 None None None 163840255 Common - dehydrogenase, E2 component, acyltransferase RSal33209_1510 176 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 163842097 Common - arginase RSal33209_3378 54 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 163840728 Common - hypothetical protein RSal33209_1986 5 None None None 163839972 Common - delta-aminolevulinic acid dehydratase RSal33209_1225 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 163838964 Common - hypothetical protein RSal33209_0199 6 None None None 163839801 Common - two-component response regulator, LuxR family RSal33209_1054 144 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163839688 Common - multidrug resistance efflux protein RSal33209_0938 151 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840008 Common - hypothetical protein RSal33209_1262 6 None None None 163838899 Common - ISRs3 RSal33209_0134 56 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841198 Common - glutamine synthetase RSal33209_2463 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 163842203 Common - DedA family protein# RSal33209_3485 4 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 163839845 Common - hypothetical protein RSal33209_1098 17 None None None 163842163 Common - D-3-phosphoglycerate dehydrogenase RSal33209_3445 125 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 163841950 Common - hydrolase (HAD superfamily) RSal33209_3224 109 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 163839074 Common - transcriptional regulator RSal33209_0309 78 COG1846 MarR, Transcriptional regulators Transcription 163839592 Common - IS994 RSal33209_0839 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839299 Common - sodium/proline symporter RSal33209_0541 133 COG4147 DhlC, Predicted symporter General function prediction only 163839821 Pathogen - hypothetical protein RSal33209_1074 1 None None None 163841140 Common - deoxyuridine 5'-triphosphate nucleotidohydrolase RSal33209_2405 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 163840176 Common - homoserine kinase RSal33209_1431 116 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 163839292 Common - hypothetical protein RSal33209_0534 7 None None None 163841569 Common - lactate 2-monooxygenase RSal33209_2836 59 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 163840739 Common secD protein-export membrane protein RSal33209_1997 208 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 163841596 Common - siderophore-interacting protein RSal33209_2863 41 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 163839484 Common - diaminopimelate epimerase RSal33209_0728 179 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 163840777 Common - 20S proteasome alpha-subunit RSal33209_2035 14 COG0638 PRE1, 20S proteasome, alpha and beta subunits Posttranslational modification, protein turnover, chaperones 163840596 Pathogen - transcriptional Regulator, AraC family RSal33209_1854 2 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 163841853 Common - glycerophosphoryl diester phosphodiesterase RSal33209_3126 3 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 163840873 Common - hypothetical protein RSal33209_2132 28 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163840099 Common - hypothetical protein RSal33209_1353 7 None None None 163840436 Common tetA.2 multidrug resistance efflux pump RSal33209_1691 28 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841724 Common - dimethyladenosine transferase RSal33209_2994 245 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 163841674 Common - IS994 RSal33209_2943 41 None None None 163840582 Common igiB.1 IgiB RSal33209_1840 52 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 163839956 Common - glycine oxidase RSal33209_1209 57 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 163840073 Common - sialidase RSal33209_1327 8 None None None 163841425 Common - putative CAAX amino terminal protease family RSal33209_2691 8 None None None 163840060 Common - beta-lactamase family protein/peptidase S9 domain RSal33209_1314 173 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163839765 Common - ABC-type sugar transporter, periplasmic component RSal33209_1016 101 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163842035 Common - hypothetical membrane protein RSal33209_3314 4 None None None 163842108 Common - hydrolase, carbon-nitrogen family RSal33209_3389 203 COG0388 COG0388, Predicted amidohydrolase General function prediction only 163841077 Common - phosphoribosyl-AMP cyclohydrolase RSal33209_2338 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 163841817 Common - hypothetical protein RSal33209_3087 3 None None None 163839129 Common - inositol 2-dehydrogenase RSal33209_0365 102 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163840527 Common - dihydroxyacetone kinase family protein RSal33209_1783 30 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 163839513 Common - IS994 RSal33209_0757 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841177 Common - lipoate-protein ligase B RSal33209_2442 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 163840090 Common - IS994 RSal33209_1344 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840838 Common - short-chain dehydrogenase RSal33209_2097 190 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839488 Common - ATP-dependent helicase, DinG family RSal33209_0732 124 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 163841118 Common - ribonuclease D RSal33209_2383 96 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 163839695 Common - predicted O-methyltransferase RSal33209_0945 23 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 163841683 Pathogen - hypothetical protein RSal33209_2952 1 None None None 163840946 Common phaG potassium efflux system protein RSal33209_2205 12 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 163838881 Common - ABC-type sugar transport system, permease component RSal33209_0116 3 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163839112 Common - inositol monophosphatase RSal33209_0348 180 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 163841194 Common - RNA polymerase sigma factor RSal33209_2459 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 163840277 Pathogen - hypothetical protein RSal33209_1532 1 None None None 163840323 Common - menaquinol-cytochrome c reductase iron-sulfur subunit RSal33209_1578 37 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 163841536 Common - hypothetical protein RSal33209_2802 2 None None None 163842186 Common - hypothetical protein RSal33209_3468 2 None None None 163840882 Common - alpha-methylacyl-CoA racemase RSal33209_2141 111 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 163839925 Common - hypothetical membrane protein RSal33209_1178 3 None None None 163840866 Common - glycerol-3-phosphate-binding protein RSal33209_2125 95 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163842022 Common - single-strand DNA binding protein RSal33209_3299 39 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 163840699 Common - phosphopantothenate--cysteine ligase RSal33209_1957 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 163839221 Pathogen - hypothetical protein RSal33209_0462 1 None None None 163838773 Common recF DNA replication and repair protein RSal33209_0004 163 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 163840848 Common - ABC-type transporter, ATPase component RSal33209_2107 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 163841545 Common - ABC transporter, ATP-binding protein RSal33209_2811 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163841070 Common - prolipoprotein diacylglyceryl transferase RSal33209_2331 128 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 163839953 Pathogen - thiamin-phosphate pyrophosphorylase RSal33209_1206 1 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 163839681 Pathogen - hypothetical protein RSal33209_0931 1 None None None 163841705 Common - transcription-repair coupling factor RSal33209_2974 230 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 163841619 Common - hypothetical signal transduction protein RSal33209_2887 53 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 163841108 Common - Fe-S metabolism associated domain subfamily RSal33209_2373 13 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 163840135 Common - hypothetical protein RSal33209_1389 5 None None None 163840370 Common - hypothetical protein RSal33209_1625 5 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 163840078 Common - fructose/tagatose bisphosphate aldolase RSal33209_1332 171 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 163838788 Common - hypothetical protein RSal33209_0021 24 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 163840925 Common - hypothetical membrane protein RSal33209_2184 3 None None None 163838976 Common - transcriptional regulator, LysR family RSal33209_0211 178 COG0583 LysR, Transcriptional regulator Transcription 163839381 Pathogen - hypothetical membrane protein RSal33209_0625 1 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 163840681 Common - DegV family protein RSal33209_1939 51 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 163839500 Common - hypothetical membrane protein RSal33209_0744 9 None None None 163841175 Common - cell division inhibitor RSal33209_2440 107 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 163841968 Common - nicotinate-nucleotide adenylyltransferase RSal33209_3243 184 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 163841610 Common - oxidoreductase RSal33209_2877 3 None None None 163840820 Common - glycosyltransferase RSal33209_2079 51 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163839436 Common - molybdate ABC transporter, permease protein RSal33209_0680 210 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 163841191 Common - hypothetical cytosolic protein RSal33209_2456 3 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 163839946 Common - Xaa-Pro aminopeptidase RSal33209_1199 210 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 163839507 Common - NUDIX hydrolase RSal33209_0751 3 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163839596 Common - amino acid permease RSal33209_0843 181 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 163839657 Common - hypothetical protein RSal33209_0905 4 None None None 163839280 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RSal33209_0521 201 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 163838824 Common - uracil phosphoribosyltransferase RSal33209_0058 164 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 163839120 Common - endochitinase RSal33209_0356 32 COG3179 COG3179, Predicted chitinase General function prediction only 163841398 Common - nucleoside-diphosphate-sugar epimerase RSal33209_2664 3 None None None 163840130 Common - RNA polymerase sigma-70 factor, family RSal33209_1384 172 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 163839271 Common - alpha-mannosidase RSal33209_0512 52 COG0383 AMS1, Alpha-mannosidase Carbohydrate transport and metabolism 163840688 Common - short chain dehydrogenase RSal33209_1946 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 163842090 Pathogen - transporter, drug/metabolite exporter family RSal33209_3371 1 None None None 163841184 Common - IS994 RSal33209_2449 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841264 Common - transcriptional regulator, MerR family RSal33209_2529 22 COG0789 SoxR, Predicted transcriptional regulators Transcription 163838943 Common - 3-hydroxyacyl-CoA dehydrogenase RSal33209_0178 66 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 163841786 Common - galactokinase RSal33209_3056 87 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 163838833 Common - glyoxalase family protein RSal33209_0068 26 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 163841293 Common - 2,4-dienoyl-CoA reductase (NADPH) RSal33209_2558 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 163839061 Common - hypothetical protein RSal33209_0296 19 COG1295 Rbn, Predicted membrane protein Function unknown 163839392 Common - membrane endopeptidase, M50 family RSal33209_0636 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 163840272 Common - transcriptional regulator, RpiR family RSal33209_1527 86 COG1737 RpiR, Transcriptional regulators Transcription 163839258 Common - peptidase M23B RSal33209_0499 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 163840365 Common - hypothetical membrane protein RSal33209_1620 2 None None None 163841409 Pathogen - hypothetical protein RSal33209_2675 1 None None None 163840109 Common - glycosyl hydrolase family 3 N terminal domain protein RSal33209_1363 179 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 163839887 Common - pirin RSal33209_1140 134 COG1741 COG1741, Pirin-related protein General function prediction only 163839171 Common - transcriptional regulator RSal33209_0408 83 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 163840269 Common - transcriptional regulator, LysR family RSal33209_1524 7 COG0583 LysR, Transcriptional regulator Transcription 163839321 Common - PEP phosphonomutase RSal33209_0563 49 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 163841911 Common - dihydroxyacetone kinase RSal33209_3185 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 163839039 Common - transcriptional regulator, TetR family RSal33209_0274 36 COG1309 AcrR, Transcriptional regulator Transcription 163839605 Common - phosphoglycerate/bisphosphoglycerate mutase RSal33209_0852 76 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 163840543 Common - transcriptional regulator, AsnC family RSal33209_1801 67 COG1522 Lrp, Transcriptional regulators Transcription 163839494 Pathogen - hypothetical membrane protein RSal33209_0738 1 None None None 163840380 Common - truncated trifolitoxin immunity protein RSal33209_1635 11 None None None 163838868 Common - predicted GTP pyrophosphokinase RSal33209_0103 14 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 163842152 Common - IS994 RSal33209_3434 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841478 Common - rhodanese-related sulfurtransferase RSal33209_2744 110 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 163841765 Common - Zn-dependent oxidoreductase RSal33209_3035 2 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 163840155 Common - adenosine 5'-monophosphoramidase RSal33209_1409 155 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 163839238 Common - cold shock protein RSal33209_0479 182 COG1278 CspC, Cold shock proteins Transcription 163839228 Common - hypothetical membrane protein RSal33209_0469 2 None None None 163840669 Common hrcA heat-inducible transcription repressor RSal33209_1927 141 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 163840591 Common - 3-hydroxyisobutyrate dehydrogenase RSal33209_1849 162 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 163840387 Common mtrA two-component response regulator RSal33209_1642 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163839101 Common - peptidase S8 and S53, subtilisin, kexin, sedolisin RSal33209_0336 136 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 163839386 Common - hypothetical membrane protein RSal33209_0630 15 COG1950 COG1950, Predicted membrane protein Function unknown 163840660 Common - transcriptional regulator, LytR family RSal33209_1918 62 COG1316 LytR, Transcriptional regulator Transcription 163839084 Pathogen - hypothetical protein RSal33209_0319 1 None None None 163840020 Common - electron transfer flavoprotein beta-subunit RSal33209_1274 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 163839978 Common - ABC transporter ATP-binding protein RSal33209_1231 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 163839878 Common corA magnesium and cobalt transport protein RSal33209_1131 166 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 163839982 Common - ATP-dependent DNA helicase RSal33209_1235 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 163840260 Common - transcriptional regulator, AsnC family RSal33209_1515 12 COG1522 Lrp, Transcriptional regulators Transcription 163841629 Common - hypothetical membrane spanning protein RSal33209_2897 11 None None None 163840471 Common - carbonic anhydrase RSal33209_1726 45 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 163840578 Common - IS994 RSal33209_1836 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840311 Common - xylose isomerase TIM barrel domain, putative DNA-binding protein RSal33209_1566 13 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163840478 Common - D-alanyl-D-alanine metallocarboxypeptidase RSal33209_1733 34 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 163841901 Common pstC phosphate transport system permease protein RSal33209_3175 223 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 163841562 Common - IS994 RSal33209_2829 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840018 Common - IS994 RSal33209_1272 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839835 Common - ribonuclease HII RSal33209_1088 204 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 163841926 Common - Esterase/Lipase RSal33209_3200 2 None None None 163839665 Common - potassium-transporting ATPase B chain RSal33209_0913 220 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 163840544 Common - 4-aminobutyrate aminotransferase RSal33209_1802 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 163840209 Common - hypothetical protein RSal33209_1464 19 None None None 163840706 Common - carbamoyl-phosphate synthase small subunit RSal33209_1964 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 163840732 Common - histidyl-tRNA synthetase RSal33209_1990 238 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163839164 Common - cystathionine gamma-synthase RSal33209_0401 170 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 163839560 Common - hypothetical protein RSal33209_0807 2 None None None 163840428 Common fepD ferric enterobactin transport system permease protein RSal33209_1683 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 163840934 Common - hypothetical protein RSal33209_2193 2 None None None 163838806 Common - hypothetical protein RSal33209_0040 46 COG0456 RimI, Acetyltransferases General function prediction only 163839677 Common - transcriptional regulator, TetR family RSal33209_0927 38 COG1309 AcrR, Transcriptional regulator Transcription 163840561 Common - dihydrodipicolinate synthase RSal33209_1819 226 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 163841738 Common - integral membrane protein RSal33209_3008 34 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 163840786 Common - cysteinyl-tRNA synthetase RSal33209_2044 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163839057 Common - exodeoxyribonuclease III RSal33209_0292 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 163841217 Pathogen - hypothetical protein RSal33209_2482 1 None None None 163841487 Pathogen - hypothetical protein RSal33209_2753 1 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 163838781 Common - hypothetical protein RSal33209_0014 3 None None None 163841731 Common - succinate-semialdehyde dehydrogenase (NADP+) RSal33209_3001 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163842128 Common - transcriptional regulator, ROK family RSal33209_3409 147 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163839001 Pathogen - glucokinase regulatory protein RSal33209_0236 1 None None None 163842120 Common - 23S rRNA methyltransferase RSal33209_3401 20 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 163839196 Common - beta-lactamase RSal33209_0436 80 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163840317 Common - phosphosulfolactate phosphohydrolase RSal33209_1572 25 COG2045 COG2045, Phosphosulfolactate phosphohydrolase and related enzymes Coenzyme metabolism / General function prediction only 163841275 Common - heterocyst glycolipid synthase RSal33209_2540 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163839202 Common - hypothetical protein RSal33209_0442 14 None None None 163841616 Common - hypothetical protein RSal33209_2883 3 None None None 163840969 Common - ATP/GTP-binding site motif A RSal33209_2229 78 COG0433 COG0433, Predicted ATPase General function prediction only 163841837 Pathogen - hypothetical protein RSal33209_3110 1 None None None 163841283 Common hmuU.1 hemin transport system permease protein RSal33209_2548 4 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 163839157 Common phnC phosphonates transport ATP-binding protein RSal33209_0394 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 163839529 Common - quinone oxidoreductase RSal33209_0773 98 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163839571 Common - methicillin resistance protein RSal33209_0818 18 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 163839583 Common - 2-dehydro-3-deoxygluconokinase RSal33209_0830 146 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163841587 Common - carboxymethylenebutenolidase RSal33209_2854 104 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 163839730 Pathogen - hypothetical membrane protein RSal33209_0980 1 None None None 163841494 Common - endonuclease III RSal33209_2760 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 163842008 Common - probable dehydrogenase, putative RSal33209_3285 42 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163839818 Common - ammonium transporter RSal33209_1071 190 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 163841849 Common - glucoamylase RSal33209_3122 69 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 163839287 Common - transcriptional regulator, ArsR family RSal33209_0529 63 COG1777 COG1777, Predicted transcriptional regulators Transcription 163840192 Common - ATP synthase gamma chain RSal33209_1447 207 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 163839917 Common - hypothetical protein RSal33209_1170 25 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 163838911 Pathogen - hypothetical membrane protein RSal33209_0146 1 None None None 163839871 Pathogen - hypothetical protein RSal33209_1124 1 None None None 163840202 Common - thioredoxin RSal33209_1457 130 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 163841940 Common - GTP cyclohydrolase I RSal33209_3214 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 163839030 Common - glucokinase RSal33209_0265 158 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163838793 Pathogen - hypothetical protein RSal33209_0026 1 None None None 163840905 Common - LSU ribosomal protein L4/L1 family RSal33209_2164 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 163841556 Common - dTDP-4-keto-6-deoxy-L-hexose 2,3-reductase RSal33209_2823 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163839348 Common - sorbitol operon regulator RSal33209_0590 57 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 163840247 Common - 3,4-dihydroxyphenylacetate 2,3-dioxygenase RSal33209_1502 37 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 163839641 Common - hypothetical protein RSal33209_0889 3 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 163842256 Common - transcriptional regulator RSal33209_3538 16 COG1609 PurR, Transcriptional regulators Transcription 163841302 Pathogen - hypothetical protein RSal33209_2567 1 None None None 163841404 Common - acetate kinase RSal33209_2670 162 COG0282 ackA, Acetate kinase Energy production and conversion 163840054 Common dppB.1 dipeptide transport system permease protein RSal33209_1308 192 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163838819 Common - macrolide-efflux protein RSal33209_0053 87 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163839130 Common iolB IolB RSal33209_0366 52 COG3718 IolB, Uncharacterized enzyme involved in inositol metabolism Carbohydrate transport and metabolism 163841092 Common - methionyl-tRNA formyltransferase RSal33209_2353 215 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 163840482 Common - LSU ribosomal protein L13P RSal33209_1737 225 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 163838903 Common - peptide synthetase RSal33209_0138 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163839335 Pathogen - hypothetical protein RSal33209_0577 1 None None None 163841053 Common - aldehyde dehydrogenase RSal33209_2313 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163839346 Common - sorbitol-binding protein, ABC transporter RSal33209_0588 51 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163839541 Common - pyridoxamine 5'-phosphate oxidase RSal33209_0785 131 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 163840798 Pathogen - hypothetical protein RSal33209_2057 1 None None None 163841978 Common - hypothetical membrane spanning protein RSal33209_3253 15 COG4243 COG4243, Predicted membrane protein Function unknown 163840385 Common - hypothetical protein RSal33209_1640 17 None None None 163840636 Common - hypothetical protein RSal33209_1894 3 None None None 163839786 Common - secretory serine protease RSal33209_1038 13 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163838884 Common - hypothetical protein RSal33209_0119 4 COG4289 COG4289, Uncharacterized protein conserved in bacteria Function unknown 163841245 Common - transcriptional regulator RSal33209_2510 15 None None None 163839679 Common - nucleoside-diphosphate-sugar epimerase RSal33209_0929 26 None None None 163839559 Pathogen - hypothetical protein RSal33209_0803 1 None None None 163842245 Common - SSU ribosomal protein S6P RSal33209_3527 183 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 163841573 Common - salicylate hydroxylase RSal33209_2840 75 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163842037 Common - hypothetical protein RSal33209_3316 2 None None None 163840394 Common - trancriptional regulator, PopR-like protein RSal33209_1649 31 COG1395 COG1395, Predicted transcriptional regulator Transcription 163840907 Common - SSU ribosomal protein S10P RSal33209_2166 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 163839706 Common - aspartate-semialdehyde dehydrogenase RSal33209_0956 194 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 163839922 Common - hypothetical protein RSal33209_1175 4 None None None 163841485 Common - hypothetical protein RSal33209_2751 2 None None None 163839537 Common - ornithine carbamoyltransferase RSal33209_0781 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 163841350 Common - sulfate adenylyltransferase subunit 1 RSal33209_2616 161 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 163841673 Common - NAD-dependent DNA ligase RSal33209_2942 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 163840487 Common - IS994 RSal33209_1742 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840759 Common - peptide deformylase RSal33209_2017 211 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 163841206 Common - hypothetical protein RSal33209_2471 4 None None None 163838835 Pathogen - hypothetical membrane protein RSal33209_0070 1 None None None 163841696 Common - phosphoglucomutase RSal33209_2965 224 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 163840622 Common - putative transcriptional regulator, MerR family RSal33209_1880 31 COG0789 SoxR, Predicted transcriptional regulators Transcription 163839117 Common - succinyl-CoA synthetase alpha chain RSal33209_0353 216 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 163840330 Common - HesB protein family RSal33209_1585 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 163840337 Common recO DNA repair protein RSal33209_1592 66 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 163838842 Pathogen - hypothetical protein RSal33209_0077 1 None None None 163840514 Pathogen - hypothetical protein RSal33209_1770 1 None None None 163841711 Pathogen - hypothetical protein RSal33209_2980 2 None None None 163841420 Common - acetyltransferase, GNAT family RSal33209_2686 87 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163839404 Common - prolyl-tRNA synthetase RSal33209_0648 242 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163840413 Common - dipeptide-binding protein RSal33209_1668 62 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163840200 Common - hypothetical protein RSal33209_1455 114 COG0628 PerM, Predicted permease General function prediction only 163842113 Common - fructose-bisphosphate aldolase RSal33209_3394 173 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 163839894 Common - Glycine betaine-binding protein RSal33209_1147 86 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 163838786 Common - epoxide hydrolase RSal33209_0019 81 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163839636 Common - hypothetical protein RSal33209_0884 7 COG3502 COG3502, Uncharacterized protein conserved in bacteria Function unknown 163839742 Common - acetyltransferase RSal33209_0993 3 None None None 163842077 Common phnB.1 PhnB RSal33209_3358 30 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 163838988 Common - acid phosphatase RSal33209_0223 6 COG2503 COG2503, Predicted secreted acid phosphatase General function prediction only 163839331 Common - putative helicase RSal33209_0573 30 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 163841955 Common - sulfurtransferase RSal33209_3229 161 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 163841935 Common - permease RSal33209_3209 23 COG3402 COG3402, Uncharacterized conserved protein Function unknown 163839795 Common - multidrug transporter, MFS family RSal33209_1048 117 None None None 163841387 Common - pyruvate dehydrogenase E1 component alpha subunit RSal33209_2653 157 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 163842010 Common - NAD dependent epimerase/dehydratase RSal33209_3287 12 None None None 163842251 Common oppB.2 oligopeptide transport system permease protein RSal33209_3533 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841622 Common ftsW.2 cell division protein RSal33209_2890 206 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 163841061 Common - dipeptide-binding protein RSal33209_2321 133 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163842146 Common - ABC transporter ATP-binding protein RSal33209_3428 11 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163841882 Pathogen - lipoprotein, putative RSal33209_3155 1 None None None 163841879 Common - oxidoreductase, short-chain dehydrogenase/reductase family RSal33209_3152 232 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 163840769 Common tatC Sec-independent protein translocase protein RSal33209_2027 201 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 163839246 Common - DNA/RNA helicase (DEAD/DEAH box family) RSal33209_0487 19 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 163841612 Common - IS994 RSal33209_2879 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842166 Common - transcriptional regulator, LysR family RSal33209_3448 2 COG0583 LysR, Transcriptional regulator Transcription 163839652 Common - secretory serine protease RSal33209_0900 21 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163841317 Common - DNA-binding protein RSal33209_2583 42 COG1396 HipB, Predicted transcriptional regulators Transcription 163839476 Common - transcriptional regulator, MarR family RSal33209_0720 37 COG1846 MarR, Transcriptional regulators Transcription 163841945 Common - hypoxanthine-guanine phosphoribosyltransferase RSal33209_3219 150 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 163838981 Common - acetolactate synthase large subunit RSal33209_0216 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 163840897 Common - SSU ribosomal protein S17P RSal33209_2156 232 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 163841633 Common - citrate synthase RSal33209_2901 192 COG0372 GltA, Citrate synthase Energy production and conversion 163841668 Common - COBF protein RSal33209_2937 62 COG0400 COG0400, Predicted esterase General function prediction only 163840950 Common phaC potassium efflux system protein RSal33209_2209 33 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 163840640 Common - glycine betaine transport ATP-binding protein RSal33209_1898 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 163840945 Common - fibrillar surface protein RSal33209_2204 12 None None None 163841343 Common - precorrin-2 dehydrogenase RSal33209_2609 199 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 163839054 Pathogen - hypothetical membrane protein RSal33209_0289 1 None None None 163839266 Common - formate dehydrogenase alpha subunit RSal33209_0507 68 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 163839724 Common - MIP family channel protein RSal33209_0974 130 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 163839990 Common - integral membrane protein RSal33209_1243 48 COG1615 COG1615, Uncharacterized conserved protein Function unknown 163840220 Common - DedA family protein RSal33209_1475 142 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 163841529 Common - multimodular transpeptidase-transglycosylase RSal33209_2795 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 163841860 Pathogen - hypothetical protein RSal33209_3133 1 None None None 163841464 Common - aminopeptidase C RSal33209_2730 15 COG3579 PepC, Aminopeptidase C Amino acid transport and metabolism 163840574 Common - short chain dehydrogenase RSal33209_1832 221 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163841291 Common padR transcriptional repressor RSal33209_2556 44 COG1695 COG1695, Predicted transcriptional regulators Transcription 163838801 Pathogen - hypothetical membrane protein RSal33209_0035 1 None None None 163840310 Pathogen - hypothetical protein RSal33209_1565 2 COG1881 COG1881, Phospholipid-binding protein General function prediction only 163840128 Common - 3-phosphoshikimate 1-carboxyvinyltransferase RSal33209_1382 228 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 163842260 Common - hypothetical membrane spanning protein RSal33209_3542 13 COG5650 COG5650, Predicted integral membrane protein Function unknown 163841840 Common - spermidine synthase RSal33209_3113 13 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 163841681 Common - biotin operon repressor RSal33209_2950 203 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 163841510 Common - sugar transporter sugar binding protein RSal33209_2776 2 None None None 163841869 Common - PTS system, fructose-specific IIABC component RSal33209_3142 25 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 163840223 Common - hypothetical protein RSal33209_1478 3 None None None 163839211 Common - extracelluar calcium binding protein RSal33209_0452 15 None None None 163840613 Common clpB ClpB RSal33209_1871 223 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 163841385 Common - dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex RSal33209_2651 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 163840187 Common - ATP synthase A chain RSal33209_1442 180 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 163841359 Common - Xaa-Pro dipeptidyl-peptidase RSal33209_2625 49 COG2936 COG2936, Predicted acyl esterases General function prediction only 163839145 Common - thioesterase family protein RSal33209_0381 69 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 163842172 Common - hypothetical membrane spanning protein RSal33209_3454 9 COG3759 COG3759, Predicted membrane protein Function unknown 163841085 Common - 3,4-dihydroxy-2-butanone 4-phosphate synthase RSal33209_2346 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 163839900 Common - exodeoxyribonuclease VII small subunit RSal33209_1153 51 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 163839205 Common - trehalose 6-phosphate phosphatase RSal33209_0445 84 COG1877 OtsB, Trehalose-6-phosphatase Carbohydrate transport and metabolism 163840304 Common - glyoxalase family protein RSal33209_1559 22 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 163839632 Common - transcriptional regulator, TetR family RSal33209_0880 21 COG1309 AcrR, Transcriptional regulator Transcription 163839974 Common - glutamate-1-semialdehyde 2,1-aminomutase RSal33209_1227 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 163842175 Common - von Willebrand factor type A domain, putative RSal33209_3457 21 None None None 163841165 Common - cytosol aminopeptidase RSal33209_2430 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 163840864 Common ugpA SN-glycerol-3-phosphate transport system permease protein RSal33209_2123 142 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840533 Common - 3-isopropylmalate dehydratase small subunit RSal33209_1789 198 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 163842017 Pathogen - hypothetical protein RSal33209_3294 1 None None None 163840460 Common - oxidoreductase RSal33209_1715 191 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163839305 Common - pyruvate dehydrogenase E1 component beta subunit RSal33209_0547 191 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 163840239 Common - DNA repair exonuclease RSal33209_1494 28 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 163841899 Common pstB phosphate transport ATP-binding protein RSal33209_3173 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 163841604 Pathogen - hypothetical protein RSal33209_2871 1 None None None 163840610 Common - hypothetical protein RSal33209_1868 12 None None None 163839469 Common - D-alanyl-D-alanine metallocarboxypeptidase RSal33209_0713 4 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 163841793 Common - permease RSal33209_3063 19 None None None 163838837 Pathogen - hypothetical protein RSal33209_0072 1 None None None 163839672 Common - beta-lactamase family protein RSal33209_0920 100 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163840231 Common - short chain dehydrogenase RSal33209_1486 107 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163839482 Common - tRNA 2-methylthioadenosine synthase RSal33209_0726 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 163840162 Pathogen - hypothetical protein RSal33209_1416 1 None None None 163839410 Common nusA transcription elongation factor RSal33209_0654 224 COG0195 NusA, Transcription elongation factor Transcription 163840245 Pathogen - acetyltransferase, gnat family RSal33209_1500 1 COG0456 RimI, Acetyltransferases General function prediction only 163841824 Pathogen - 3-oxoacyl-[acyl-carrier-protein] synthase RSal33209_3094 1 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841225 Common - hypothetical cytosolic protein RSal33209_2490 52 COG1496 COG1496, Uncharacterized conserved protein Function unknown 163839607 Common - two-component response regulator RSal33209_0854 210 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163841037 Common - conserved hypothetical protein, UPF0029 RSal33209_2297 121 COG1739 COG1739, Uncharacterized conserved protein Function unknown 163839621 Common - monooxygenase RSal33209_0869 69 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163841068 Common - glutamate synthase [NADPH] large chain RSal33209_2329 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 163841661 Pathogen - hypothetical protein RSal33209_2930 1 None None None 163841332 Common dpiB.3 sensor kinase RSal33209_2598 12 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 163839090 Common - thymidine phosphorylase RSal33209_0325 6 None None None 163839062 Common - MgtC family protein RSal33209_0297 117 COG1285 SapB, Uncharacterized membrane protein Function unknown 163841322 Common - GTP-binding protein RSal33209_2588 237 COG1160 COG1160, Predicted GTPases General function prediction only 163838932 Common - transcriptional regulator, PadR family RSal33209_0167 11 COG1695 COG1695, Predicted transcriptional regulators Transcription 163840605 Common - phosphoribosylformylglycinamidine cyclo-ligase RSal33209_1863 225 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 163842213 Common - uracil permease RSal33209_3495 39 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 163839985 Common - superfamily I DNA and RNA helicase RSal33209_1238 229 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 163838858 Common - putative phospholipid-binding protein RSal33209_0093 121 COG1881 COG1881, Phospholipid-binding protein General function prediction only 163840403 Common - putative transport protein RSal33209_1658 36 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163839458 Common - RNA-metabolising metallo-beta-lactamase RSal33209_0702 163 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 163840911 Pathogen - hypothetical protein RSal33209_2170 1 None None None 163841650 Common - hypothetical protein RSal33209_2919 7 COG2267 PldB, Lysophospholipase Lipid metabolism 163841257 Common - pyruvate carboxylase RSal33209_2522 235 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 163842069 Common - ferric enterobactin transporter RSal33209_3350 19 COG4592 FepB, ABC-type Fe2+-enterobactin transport system, periplasmic component Inorganic ion transport and metabolism 163841517 Common - hypothetical membrane spanning protein RSal33209_2783 29 COG3336 COG3336, Predicted membrane protein Function unknown 163840348 Common - hypothetical membrane protein RSal33209_1603 24 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 163839316 Common - sdenosylmethionine-8-amino-7-oxononanoate aminotransferase RSal33209_0558 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 163840976 Common sufC FeS assembly ATPase RSal33209_2236 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 163840084 Common capE capsular polysaccharide synthesis enzyme RSal33209_1338 195 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163838974 Common - transcriptional regulator, LysR family RSal33209_0209 111 COG0583 LysR, Transcriptional regulator Transcription 163838997 Pathogen - hypothetical protein RSal33209_0232 1 None None None 163841395 Common paaB phenylacetic acid degradation protein RSal33209_2661 38 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 163842045 Common - cysteine synthase RSal33209_3324 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 163839226 Common - hypothetical membrane protein RSal33209_0467 3 None None None 163840740 Common - preprotein translocase, YajC subunit RSal33209_1998 36 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 163840647 Common - hypothetical membrane protein RSal33209_1905 7 None None None 163841410 Common - hypothetical protein RSal33209_2676 2 None None None 163840097 Common - tyrosine phenol-lyase RSal33209_1351 14 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 163840801 Common - hypothetical membrane protein RSal33209_2060 5 None None None 163839450 Common - molybdenum cofactor biosynthesis protein C RSal33209_0694 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 163841238 Common mraZ cell division protein RSal33209_2503 135 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 163839186 Common - sugar ABC transporter, permease component RSal33209_0423 184 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840411 Common - IS994 RSal33209_1666 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841233 Common - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase RSal33209_2498 209 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 163838948 Common - glutarate-CoA ligase RSal33209_0183 109 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 163841892 Common - NAD-dependent oxidoreductase RSal33209_3165 149 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163841640 Common - glucan endo-1,3-beta-glucosidase RSal33209_2909 34 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 163840287 Common - predicted acetyltransferase RSal33209_1542 4 None None None 163841127 Common - 1-deoxy-D-xylulose 5-phosphate synthase RSal33209_2392 220 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 163841402 Pathogen - hypothetical protein RSal33209_2668 1 None None None 163840990 Common - oxppcycle protein RSal33209_2250 29 COG3429 COG3429, Glucose-6-P dehydrogenase subunit Carbohydrate transport and metabolism 163840619 Common - hypothetical protein RSal33209_1877 31 COG4339 COG4339, Uncharacterized protein conserved in bacteria Function unknown 163841012 Common - superoxide dismutase RSal33209_2272 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 163840496 Common - hypothetical protein RSal33209_1752 67 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 163841762 Common - fumarate hydratase RSal33209_3032 232 COG0114 FumC, Fumarase Energy production and conversion 163842134 Common - esterase RSal33209_3415 128 COG0657 Aes, Esterase/lipase Lipid metabolism 163839025 Common - multiple sugar-binding periplasmic receptor RSal33209_0260 3 None None None 163841930 Common - multidrug transporter RSal33209_3204 94 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840329 Common - cytochrome c oxidase, subunit II RSal33209_1584 144 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 163841033 Common - excinuclease ABC, B subunit RSal33209_2293 224 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 163842193 Common - IS994 RSal33209_3475 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840715 Common - 3-dehydroquinate synthase RSal33209_1973 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 163842082 Pathogen - hypothetical protein RSal33209_3363 1 None None None 163840987 Common - transaldolase RSal33209_2247 135 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 163842089 Common - transporter, drug/metabolite exporter family RSal33209_3370 14 COG2510 COG2510, Predicted membrane protein Function unknown 163840539 Common - IS994 RSal33209_1797 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841804 Common - exodeoxyribonuclease III RSal33209_3074 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 163841433 Common - 1,2-alpha-L-fucosidase RSal33209_2699 17 None None None 163841378 Common - O-succinylbenzoate synthase RSal33209_2644 96 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 163842155 Common - transporter RSal33209_3437 26 COG4117 COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Energy production and conversion 163839936 Common - hypothetical protein RSal33209_1189 16 None None None 163839049 Common - methionine aminopeptidase RSal33209_0284 216 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 163839863 Pathogen - hypothetical protein RSal33209_1116 1 None None None 163841578 Common - carboxypeptidase S1 RSal33209_2845 37 COG2939 COG2939, Carboxypeptidase C (cathepsin A) Amino acid transport and metabolism 163840282 Pathogen - hypothetical protein RSal33209_1537 1 None None None 163839089 Common - thymidine phosphorylase RSal33209_0324 15 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 163840754 Common - threonyl-tRNA synthetase RSal33209_2012 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163842270 Common parA.3 chromosome partitioning protein RSal33209_3552 198 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163841474 Common - methyltransferase RSal33209_2740 49 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 163841810 Common malG maltose transport system permease protein RSal33209_3080 178 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841152 Common - hypothetical protein RSal33209_2417 11 COG0456 RimI, Acetyltransferases General function prediction only 163839009 Common - oxidoreductase RSal33209_0244 170 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163839040 Pathogen - MMPL family transporter RSal33209_0275 1 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 163841687 Common maf septum formation protein RSal33209_2956 183 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 163841966 Common - iojap protein family RSal33209_3241 189 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 163839444 Common - sensory transduction protein kinase RSal33209_0688 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 163842106 Common - transcriptional regulator, TetR family RSal33209_3387 51 COG1309 AcrR, Transcriptional regulator Transcription 163840375 Common - IS994 RSal33209_1630 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842041 Common - hypothetical cytosolic protein RSal33209_3320 81 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 163840783 Common - membrane endopeptidase, M50 family RSal33209_2041 52 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 163841819 Common - hypothetical protein RSal33209_3089 3 None None None 163840275 Common - phosphonates transport system permease RSal33209_1530 80 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 163839050 Common - hypothetical protein RSal33209_0285 10 None None None 163839697 Common - ABC transporter permease protein RSal33209_0947 7 None None None 163841262 Common - transcriptional regulator RSal33209_2527 26 COG0789 SoxR, Predicted transcriptional regulators Transcription 163840836 Common - hypothetical membrane protein RSal33209_2095 51 COG0730 COG0730, Predicted permeases General function prediction only 163839310 Common - acyl-CoA dehydrogenase E19 RSal33209_0552 164 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163839103 Pathogen - hypothetical protein RSal33209_0338 1 None None None 163839735 Common secE protein translocase subunit RSal33209_0986 21 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 163839669 Common kdpE two-component response regulator RSal33209_0917 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163841523 Common - 3-dehydroquinate dehydratase RSal33209_2789 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 163839260 Common - hypothetical protein RSal33209_0501 13 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 163841543 Common - ABC transporter ATP-binding protein RSal33209_2809 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163840659 Common - DNA integration/recombination/inversion protein RSal33209_1917 101 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 163839873 Common - transcriptional regulator, TetR family RSal33209_1126 7 None None None 163841277 Common - putative hydrolase RSal33209_2542 137 COG2267 PldB, Lysophospholipase Lipid metabolism 163839714 Common - putative phosphatase RSal33209_0964 26 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163841700 Common - transporter, MFS superfamily RSal33209_2969 115 None None None 163839683 Common - putative inosine-uridine preferring nucleoside hydrolase RSal33209_0933 80 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 163841513 Common - glucokinase RSal33209_2779 101 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163841081 Common hisG ATP phosphoribosyltransferase RSal33209_2342 212 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 163839655 Common - putative amidohydrolase RSal33209_0903 76 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 163840822 Common - putative oxidoreductase RSal33209_2081 42 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840123 Common - methyltransferase RSal33209_1377 89 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163840923 Common - cation-transporting ATPase, E1-E2 family RSal33209_2182 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 163840819 Common - glutamate decarboxylase RSal33209_2078 65 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 163841957 Common - IS994 RSal33209_3231 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841063 Common - transcriptional regulator, GntR family RSal33209_2323 126 COG2186 FadR, Transcriptional regulators Transcription 163840443 Common - glycoprotease family protein RSal33209_1698 170 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 163840119 Common - CrcB family protein RSal33209_1373 152 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 163839282 Common - glycosyltransferase RSal33209_0523 219 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163841664 Pathogen - hypothetical protein RSal33209_2933 1 None None None 163841505 Common - IolE protein-like protein RSal33209_2771 9 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163841396 Common paaA phenylacetic acid degradation protein RSal33209_2662 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 163841952 Common - diacylglycerol kinase family protein RSal33209_3226 55 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 163839394 Common - hypothetical membrane protein RSal33209_0638 7 None None None 163839745 Common - endo-beta-N-acetylglucosaminidase RSal33209_0996 13 COG4724 COG4724, Endo-beta-N-acetylglucosaminidase D Carbohydrate transport and metabolism 163841992 Common clpP.3 ATP-dependent endopeptidase clp proteolytic subunit RSal33209_3267 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 163841937 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase RSal33209_3211 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 163839519 Common - arabinose efflux permease RSal33209_0763 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163838945 Common - acetoacetate decarboxylase RSal33209_0180 18 COG4689 Adc, Acetoacetate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 163839628 Common - transporter, MFS superfamily RSal33209_0876 35 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163842095 Common - phosphoribosylformylglycinamidine synthase RSal33209_3376 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 163839127 Common iolE.1 IolE RSal33209_0363 59 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163839446 Common - UDP-glucose 4-epimerase RSal33209_0690 231 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163842116 Common - IS994 RSal33209_3397 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840856 Common - tRNA pseudouridine synthase A RSal33209_2115 231 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 163838883 Common - ABC-type sugar transport system, periplasmic component RSal33209_0118 5 None None None 163841145 Common - nucleotide pyrophosphatase RSal33209_2410 28 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 163841999 Common - hypothetical protein RSal33209_3276 2 None None None 163842102 Pathogen - hypothetical protein RSal33209_3383 2 None None None 163841138 Common - hypothetical protein RSal33209_2403 11 None None None 163839856 Pathogen - hypothetical membrane protein RSal33209_1109 1 None None None 163839585 Common - D-aminoacylase RSal33209_0832 59 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 163839594 Pathogen - hypothetical protein RSal33209_0841 1 None None None 163840257 Common - pyruvate dehydrogenase E1 component alpha subunit RSal33209_1512 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 163839072 Common - dehydrogenase RSal33209_0307 8 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163839018 Common - NAD-dependent oxidoreductase RSal33209_0253 160 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163840525 Common - methyltransferase RSal33209_1781 205 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 163841676 Pathogen - hypothetical protein RSal33209_2945 1 None None None 163840750 Common - riboflavin biosynthesis protein RibD C-terminal domain protein RSal33209_2008 44 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 163840814 Common - transcriptional regulator, TetR family RSal33209_2073 10 COG1309 AcrR, Transcriptional regulator Transcription 163839492 Common - imidazoleglycerol-phosphate dehydratase RSal33209_0736 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 163842254 Common - IS994 RSal33209_3536 39 None None None 163839284 Common - peptidase M23B RSal33209_0526 77 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 163839711 Pathogen - hypothetical membrane protein RSal33209_0961 1 None None None 163839401 Common - transcriptional regulator, TetR family RSal33209_0645 74 COG1309 AcrR, Transcriptional regulator Transcription 163840309 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 RSal33209_1564 94 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 163839590 Common - transcriptional regulator RSal33209_0837 16 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 163839599 Common - hypothetical protein RSal33209_0846 2 None None None 163840398 Common - hypothetical protein RSal33209_1653 7 None None None 163840871 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_2130 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163841707 Common nhaA Na+/H+ antiporter RSal33209_2976 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 163841278 Common - macrolide glycosyltransferase RSal33209_2543 49 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 163841109 Pathogen - hypothetical protein RSal33209_2374 1 None None None 163840434 Common - diaminopimelate decarboxylase RSal33209_1689 210 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 163839223 Common - RNA polymerase ECF-type sigma factor RSal33209_0464 163 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 163840035 Common - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A RSal33209_1289 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 163841125 Common - oxidoreductase RSal33209_2390 194 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163839289 Common - uridylate kinase RSal33209_0531 232 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 163839486 Common - 16S rRNA m2G1207 methyltransferase RSal33209_0730 80 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 163841158 Common - DNA gyrase subunit B RSal33209_2423 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 163839948 Common - ATP-dependent RNA helicase RSal33209_1201 239 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 163841594 Common - Fe3+-siderophore transport system permease RSal33209_2861 99 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 163841029 Common - proline iminopeptidase RSal33209_2289 42 COG2267 PldB, Lysophospholipase Lipid metabolism 163841102 Common sugE SugE RSal33209_2367 36 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 163839470 Common - D-alanyl-D-alanine metallocarboxypeptidase RSal33209_0714 14 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 163842161 Common - metallo-beta-lactamase superfamily, putative RSal33209_3443 61 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 163841975 Common tenA transcriptional activator RSal33209_3250 41 COG0819 TenA, Putative transcription activator Transcription 163838993 Common - phosphoribosylglycinamide formyltransferase RSal33209_0228 228 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 163839425 Pathogen - hypothetical protein RSal33209_0669 1 None None None 163842033 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_3312 8 None None None 163841079 Pathogen - hypothetical protein RSal33209_2340 1 None None None 163841815 Common - alpha-glucosidase RSal33209_3085 138 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163840075 Common - sialidase RSal33209_1329 4 None None None 163840191 Common - ATP synthase alpha chain RSal33209_1446 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 163840262 Common - quinolinate synthetase A RSal33209_1517 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 163842230 Common - ISRs2 transposase RSal33209_3512 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840147 Common - Fe2+/Zn2+ uptake regulation protein RSal33209_1401 188 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 163841993 Common clpP.4 ATP-dependent endopeptidase clp proteolytic subunit RSal33209_3268 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 163841390 Pathogen - hypothetical protein RSal33209_2656 1 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163839256 Common - phosphoserine aminotransferase RSal33209_0497 18 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 163840770 Common tatA Sec-independent protein translocase protein RSal33209_2028 4 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 163841920 Common - integral membrane protein RSal33209_3194 23 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 163841554 Common - copper resistance protein D RSal33209_2821 57 COG3336 COG3336, Predicted membrane protein Function unknown 163839218 Common tetB tetracycline resistance protein RSal33209_0459 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163841547 Common - IS994 RSal33209_2814 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841406 Common paaI phenylacetic acid degradation protein RSal33209_2672 38 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 163842126 Common - putative glycosyl hydrolase RSal33209_3407 19 COG1470 COG1470, Predicted membrane protein Function unknown 163841726 Common - DNase, TatD family RSal33209_2996 232 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 163841048 Common - bifunctional deaminase-reductase domain protein RSal33209_2308 36 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 163841072 Common - tryptophan synthase beta chain RSal33209_2333 225 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 163840788 Common - oxidoreductase RSal33209_2046 180 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163839774 Common - para-aminobenzoate synthase RSal33209_1025 224 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 163840426 Common - ferric enterobactin transport system, ATP-binding protein RSal33209_1681 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 163840315 Common - transcriptional regulator, ArsR family protein RSal33209_1570 8 None None None 163840178 Common - peptide chain release factor 1 RSal33209_1433 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 163841489 Common - type II secretion system protein E RSal33209_2755 151 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 163839328 Common - dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex RSal33209_0570 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 163839951 Common - exoribonuclease II RSal33209_1204 189 COG0557 VacB, Exoribonuclease R Transcription 163840979 Common sufB FeS assembly ATPase RSal33209_2239 184 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 163841294 Common - 2,4-dienoyl-CoA reductase (NADPH) RSal33209_2559 56 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 163839011 Common - hypothetical protein RSal33209_0246 12 COG2259 COG2259, Predicted membrane protein Function unknown 163841215 Common - hypothetical protein RSal33209_2480 2 None None None 163839627 Common - transcriptional regulator, MarR family RSal33209_0875 26 COG1846 MarR, Transcriptional regulators Transcription 163840305 Common - methyltransferase RSal33209_1560 42 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163841308 Common - ABC transporter substrate-binding protein RSal33209_2574 37 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 163839244 Common phoR phosphate regulon sensor protein RSal33209_0485 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 163841320 Common - transcriptional regulator, TetR family RSal33209_2586 31 COG1309 AcrR, Transcriptional regulator Transcription 163841614 Pathogen - hypothetical protein RSal33209_2881 1 None None None 163838923 Common - oxidoreductase RSal33209_0158 89 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163839155 Common - IS994 RSal33209_0392 132 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840967 Common - transporter, auxin domain RSal33209_2227 74 COG0679 COG0679, Predicted permeases General function prediction only 163840995 Common - triosephosphate isomerase RSal33209_2255 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 163839527 Common - non-ribosomal peptide synthetase RSal33209_0771 18 None None None 163839438 Common - oxidoreductase, molybdopterin-binding RSal33209_0682 78 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 163838795 Common - phosphoglucomutase RSal33209_0028 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 163841280 Common - hypothetical protein RSal33209_2545 13 COG2606 EbsC, Uncharacterized conserved protein Function unknown 163841830 Common - cell wall endopeptidase RSal33209_3103 87 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 163839915 Common - lipolytic enzyme, GDSL RSal33209_1168 2 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 163841110 Common - hydrolases of the alpha/beta superfamily RSal33209_2375 34 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 163839843 Common - hypothetical protein RSal33209_1096 48 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 163841839 Common - spermidine synthase RSal33209_3112 11 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 163841301 Pathogen - hypothetical protein RSal33209_2566 1 None None None 163840712 Common nusB transcription antitermination factor RSal33209_1970 166 COG0781 NusB, Transcription termination factor Transcription 163840522 Common - pantetheine-phosphate adenylyltransferase RSal33209_1778 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 163840143 Common - putative magnesium and cobalt efflux protein, CBS domain RSal33209_1397 210 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 163839763 Pathogen - hypothetical protein RSal33209_1014 1 None None None 163838890 Common dps ferroxidase RSal33209_0125 112 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 163841329 Common parA.2 chromosome partitioning protein RSal33209_2595 228 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163842071 Pathogen - hypothetical protein RSal33209_3352 1 None None None 163840100 Common - hypothetical protein RSal33209_1354 2 None None None 163842201 Common - ribonucleoside-diphosphate reductase alpha chain RSal33209_3483 218 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 163840194 Common - ATP synthase epsilon chain RSal33209_1449 127 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 163840027 Common - RNA polymerase sigma factor RSal33209_1281 132 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 163841044 Common - low-affinity inorganic phosphate transporter RSal33209_2304 117 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 163840508 Common - GMP reductase RSal33209_1764 231 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 163840708 Common - dihydroorotase RSal33209_1966 214 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 163841784 Common - transcriptional regulator, DeoR family RSal33209_3054 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 163839138 Common - carbon starvation protein A RSal33209_0374 104 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 163840153 Common - thiosulfate sulfurtransferase RSal33209_1407 8 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 163839984 Common - NADH pyrophosphatase RSal33209_1237 98 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 163841172 Common - osmotically inducible protein C RSal33209_2437 73 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 163840541 Common - sortase RSal33209_1799 3 None None None 163839114 Common - hypothetical protein RSal33209_0350 14 None None None 163840240 Pathogen - hypothetical protein RSal33209_1495 1 None None None 163840676 Common - carboxylesterase RSal33209_1934 22 COG2272 PnbA, Carboxylesterase type B Lipid metabolism 163841441 Common ccdA cytochrome c-type biogenesis protein RSal33209_2707 88 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 163839465 Pathogen - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_0709 1 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 163841360 Common - fumarate reductase flavoprotein subunit RSal33209_2626 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 163840549 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_1807 233 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839758 Pathogen - hypothetical protein RSal33209_1009 1 None None None 163840249 Common - 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase RSal33209_1504 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163839200 Common - FAD/FMN-containing dehydrogenase RSal33209_0440 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 163840367 Common - sensory transduction protein kinase RSal33209_1622 120 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 163840736 Common - hypothetical protein RSal33209_1994 3 None None None 163839601 Common - macrolide-efflux protein RSal33209_0848 21 None None None 163840455 Common - formate--tetrahydrofolate ligase RSal33209_1710 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 163839353 Common - sugar operon repressor RSal33209_0595 2 None None None 163839813 Common - hypothetical membrane protein RSal33209_1066 11 None None None 163841746 Common - glycosyltransferase RSal33209_3016 30 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 163839889 Common - GTPase RSal33209_1142 6 None None None 163840429 Common - ferric enterobactin transport system, periplasmic components RSal33209_1684 88 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 163838900 Common - IS994 RSal33209_0135 39 None None None 163839934 Common - DNA-3-methyladenine glycosylase RSal33209_1187 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 163840133 Common - hypothetical protein RSal33209_1387 15 None None None 163840576 Common - quinone oxidoreductase RSal33209_1834 161 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163840671 Common - hypothetical protein RSal33209_1929 12 COG3296 COG3296, Uncharacterized protein conserved in bacteria Function unknown 163839209 Common - disulfide bond isomerase RSal33209_0449 21 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 163839966 Common - uroporphyrinogen decarboxylase RSal33209_1219 176 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 163839231 Common - hypothetical protein RSal33209_0472 13 COG2966 COG2966, Uncharacterized conserved protein Function unknown 163840804 Common - putative Iron(III) transport ATP-binding protein RSal33209_2063 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 163842015 Common - thioesterase RSal33209_3292 36 COG0824 FcbC, Predicted thioesterase General function prediction only 163842055 Common - IS994 RSal33209_3335 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839150 Common - hypothetical protein RSal33209_0386 12 None None None 163840745 Common - pyridoxine biosynthesis amidotransferase RSal33209_2003 89 COG0311 PDX2, Predicted glutamine amidotransferase involved in pyridoxine biosynthesis Coenzyme metabolism 163841864 Common - hypothetical protein RSal33209_3137 3 None None None 163841789 Common - transporter, MFS superfamily RSal33209_3059 103 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 163840203 Common - NADH-dependent flavin oxidoreductase RSal33209_1458 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 163839811 Common - hydrolase, HAD superfamily RSal33209_1064 101 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 163842024 Common - methionine aminopeptidase RSal33209_3302 244 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 163840959 Pathogen - hypothetical protein RSal33209_2218 1 None None None 163840313 Pathogen - hypothetical protein RSal33209_1568 1 None None None 163839078 Common - luciferase-like monooxygenase RSal33209_0313 114 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 163839777 Common - IS994 RSal33209_1028 133 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839059 Common - putative 2'-5' RNA ligase RSal33209_0294 14 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 163841258 Pathogen - hypothetical protein RSal33209_2523 1 None None None 163840183 Common - UDP-D-quinovosamine 4-dehydrogenase RSal33209_1438 207 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163840473 Common - holo-[acyl-carrier protein] synthase RSal33209_1728 11 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 163839399 Pathogen - hypothetical protein RSal33209_0643 1 None None None 163839648 Common - cystathionine beta-synthase RSal33209_0896 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 163839662 Common - potassium-transporting ATPase A chain RSal33209_0910 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 163841251 Common - carboxylesterase RSal33209_2516 66 COG1647 COG1647, Esterase/lipase General function prediction only 163841888 Common - chloramphenicol resistance protein RSal33209_3161 104 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840895 Common - molybdopterin dependent oxidoreductase RSal33209_2154 126 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 163840717 Common - chorismate synthase RSal33209_1975 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 163839580 Common - transcriptional regulator, GntR family RSal33209_0827 106 COG1802 GntR, Transcriptional regulators Transcription 163842148 Common - ABC transporter ATP-binding protein RSal33209_3430 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163839162 Common - serine protease C precursor RSal33209_0399 10 None None None 163840846 Common - putative peptidase RSal33209_2105 32 COG1470 COG1470, Predicted membrane protein Function unknown 163841646 Common - ABC transporter ATP-binding protein RSal33209_2915 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163840738 Common secF protein-export membrane protein RSal33209_1996 207 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 163841112 Common msrB peptide methionine sulfoxide reductase RSal33209_2377 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 163840567 Common - argininosuccinate lyase RSal33209_1825 214 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 163839369 Common - fumarylacetoacetate (FAA) hydrolase family RSal33209_0612 173 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 163839740 Common - acetyltransferase RSal33209_0991 7 COG0456 RimI, Acetyltransferases General function prediction only 163842189 Common - hypothetical protein RSal33209_3471 15 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 163840608 Common - dgpf domain protein RSal33209_1866 41 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 163841691 Common - macrolide glycosyltransferase RSal33209_2960 10 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 163839421 Common - IS994 RSal33209_0665 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838840 Common - ATP-dependent helicase RSal33209_0075 31 None None None 163839650 Common - secretory serine protease RSal33209_0898 17 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163840878 Common - IS994 RSal33209_2137 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840992 Common - hypothetical protein RSal33209_2252 4 None None None 163842067 Pathogen - hypothetical protein RSal33209_3348 1 None None None 163840615 Common tetP.1 tetracycline resistance protein RSal33209_1873 127 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 163841508 Common - hypothetical protein RSal33209_2774 6 None None None 163841877 Common - proline/betaine transporter RSal33209_3150 61 None None None 163840457 Common - IS994 RSal33209_1712 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840188 Common - ATP synthase C chain RSal33209_1443 12 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 163841383 Common - hypothetical protein RSal33209_2649 2 None None None 163841776 Common - trans,cis-farnesyl diphosphate synthase RSal33209_3046 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 163841767 Common - transcriptional regulator, Cro/CI family RSal33209_3037 62 COG1476 COG1476, Predicted transcriptional regulators Transcription 163841205 Common - hypothetical protein RSal33209_2470 6 COG0645 COG0645, Predicted kinase General function prediction only 163841466 Common - hypothetical protein RSal33209_2732 36 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 163840300 Common - 3-hydroxybutyryl-CoA dehydrogenase RSal33209_1555 158 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 163841345 Common cysA.1 sulfate transport ATP-binding protein RSal33209_2611 201 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 163839076 Common - organic hydroperoxide resistance protein RSal33209_0311 82 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 163840225 Common - transcriptional regulator, GntR family RSal33209_1480 40 COG1725 COG1725, Predicted transcriptional regulators Transcription 163842262 Common - phosphoglycerate mutase family protein RSal33209_3544 143 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 163841798 Common - disaccharide-binding protein RSal33209_3068 75 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163840181 Common - glycosyl transferase family 2 RSal33209_1436 79 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 163841867 Common - transcriptional regulators of sugar metabolism, DeoR family RSal33209_3140 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 163841476 Common - phenylalanyl-tRNA synthetase alpha chain RSal33209_2742 29 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 163841638 Common - deoxyguanosinetriphosphate triphosphohydrolase RSal33209_2907 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 163840881 Common - alpha-methylacyl-CoA racemase RSal33209_2140 44 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 163841437 Common - hypothetical protein RSal33209_2703 2 None None None 163840572 Common - transcriptional regulator, MarR family RSal33209_1830 134 COG1733 COG1733, Predicted transcriptional regulators Transcription 163840682 Common - leucyl-tRNA synthetase RSal33209_1940 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163841455 Common - bacterial regulatory protein, GntR family RSal33209_2721 87 COG2186 FadR, Transcriptional regulators Transcription 163841083 Common - 6,7-dimethyl-8-ribityllumazine synthase RSal33209_2344 223 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 163839147 Pathogen - hypothetical protein RSal33209_0383 1 None None None 163839213 Pathogen - hypothetical protein RSal33209_0454 1 None None None 163840222 Common - Na(+)/H(+) antiporter RSal33209_1477 61 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 163841512 Common - ABC transporter, permease protein RSal33209_2778 152 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163839726 Pathogen - hypothetical protein RSal33209_0976 1 None None None 163841347 Common - sulfate-binding protein RSal33209_2613 112 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 163842099 Common - hypothetical cytosolic protein RSal33209_3380 39 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 163839562 Common - HAD-superfamily hydrolase, subfamily IIA RSal33209_0809 88 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 163839768 Common - siderophore-interacting protein RSal33209_1019 30 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 163841606 Common - hypothetical protein RSal33209_2873 7 None None None 163839467 Common ftsK DNA translocase RSal33209_0711 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 163842135 Common - short chain dehydrogenase RSal33209_3416 140 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163839543 Common - ABC-type multidrug transport protein, ATPase component RSal33209_0787 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163839326 Common - pyruvate dehydrogenase E1 component alpha subunit RSal33209_0568 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 163839647 Pathogen - hypothetical protein RSal33209_0895 1 None None None 163840633 Common - hypothetical protein RSal33209_1891 2 None None None 163841698 Pathogen - hypothetical protein RSal33209_2967 1 None None None 163839337 Common - IS994 RSal33209_0579 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840630 Common - ATP-dependent RNA helicase RSal33209_1888 234 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 163840056 Common dppC.1 dipeptide transport system permease protein RSal33209_1310 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841154 Common - cytochrome d ubiquinol oxidase subunit II RSal33209_2419 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 163840729 Pathogen - hypothetical protein RSal33209_1987 1 None None None 163838886 Common - alpha-L-fucosidase RSal33209_0121 32 COG3669 COG3669, Alpha-L-fucosidase Carbohydrate transport and metabolism 163840799 Pathogen - hypothetical protein RSal33209_2058 1 None None None 163838870 Common - subtilisin-like protease RSal33209_0105 10 None None None 163839557 Common - ATP-dependent DNA helicase rep RSal33209_0801 32 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 163840888 Common - SSU ribosomal protein S5P RSal33209_2147 245 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 163840909 Common - permease transporter, MFS family RSal33209_2168 50 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 163841875 Common - proline/betaine transporter RSal33209_3148 42 None None None 163840601 Common - L-asparaginase RSal33209_1859 46 COG4448 AnsA, L-asparaginase II Amino acid transport and metabolism 163841051 Common - IS994 RSal33209_2311 42 None None None 163841135 Pathogen - IS994 RSal33209_2400 1 None None None 163839047 Common - hypothetical protein RSal33209_0282 2 None None None 163840331 Common - peptidase family M20/M25/M40 RSal33209_1586 173 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163839362 Pathogen - hypothetical protein RSal33209_0604 1 None None None 163841983 Common - isoleucyl-tRNA synthetase RSal33209_3258 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163839517 Common - phenylalanyl-tRNA synthetase beta chain RSal33209_0761 237 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 163840762 Common pdxR transcriptional regulator RSal33209_2020 229 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 163841444 Common - hypothetical protein RSal33209_2710 117 COG2353 COG2353, Uncharacterized conserved protein Function unknown 163841315 Pathogen - dehydrogenase RSal33209_2581 1 None None None 163842140 Common - uronate isomerase RSal33209_3421 58 COG1904 UxaC, Glucuronate isomerase Carbohydrate transport and metabolism 163840627 Common - hypothetical protein RSal33209_1885 35 COG3758 COG3758, Uncharacterized protein conserved in bacteria Function unknown 163840307 Common - pyruvate dehydrogenase (cytochrome) RSal33209_1562 38 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 163840913 Common - translation elongation factor G RSal33209_2172 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 163840392 Common - MoxR-like ATPase RSal33209_1647 178 COG0714 COG0714, MoxR-like ATPases General function prediction only 163841663 Common - 6-phosphogluconolactonase RSal33209_2932 44 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 163841483 Pathogen - hypothetical protein RSal33209_2749 1 None None None 163842021 Pathogen - single-strand DNA binding protein RSal33209_3298 1 None None None 163838856 Common - hydrolase (HAD superfamily) RSal33209_0091 51 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 163838930 Common frnE FrnE RSal33209_0165 86 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 163840292 Common - DNA excisionase, ATPase subunit RSal33209_1547 184 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 163840693 Common - transcriptional regulator RSal33209_1951 64 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 163839402 Common - putative transcriptional regulator RSal33209_0646 54 COG1316 LytR, Transcriptional regulator Transcription 163840512 Common - 60 kDa chaperonin GroEL RSal33209_1768 246 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 163839788 Common - D-3-phosphoglycerate dehydrogenase RSal33209_1041 223 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 163841519 Common - ABC-type sugar transport system, periplasmic component RSal33209_2785 2 None None None 163839153 Common - nucleotide pyrophosphatase-like protein RSal33209_0389 7 COG3379 COG3379, Uncharacterized conserved protein Function unknown 163838804 Common - beta-galactosidase RSal33209_0038 67 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 163839784 Common - NAD-dependant oxidoreductase RSal33209_1036 157 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163841829 Common - hypothetical cytosolic protein RSal33209_3102 46 COG3824 COG3824, Uncharacterized protein conserved in bacteria Function unknown 163840941 Common - IS994 RSal33209_2200 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840724 Common - SSU ribosomal protein S4P RSal33209_1982 237 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 163841422 Common - 3-hydroxybutyryl-CoA dehydrogenase RSal33209_2688 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 163841143 Common - putative rRNA methylase RSal33209_2408 19 None None None 163840361 Common - polysaccharide export ABC transporter permease protein RSal33209_1616 104 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 163841371 Common - geranylgeranyl reductase RSal33209_2637 40 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 163841620 Common - hypothetical exported protein with FHA domain RSal33209_2888 42 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 163839340 Common - hypothetical cytosolic protein RSal33209_0582 102 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 163838875 Common - D-3-phosphoglycerate dehydrogenase RSal33209_0110 230 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 163839704 Pathogen - hypothetical protein RSal33209_0954 1 None None None 163841334 Common - IS994 RSal33209_2600 39 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840900 Common - SSU ribosomal protein S3P RSal33209_2159 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 163840654 Common - malate:quinone oxidoreductase RSal33209_1912 56 COG0579 COG0579, Predicted dehydrogenase General function prediction only 163840710 Common pyrR pyrimidine operon regulatory protein RSal33209_1968 109 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 163840285 Common - IS994 RSal33209_1540 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841894 Common - methionine gamma-lyase RSal33209_3167 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 163841791 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_3061 13 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840064 Common - acetyltransferase, GNAT family RSal33209_1318 14 COG3375 COG3375, Uncharacterized conserved protein Function unknown 163842043 Common - NIF3-related protein RSal33209_3322 116 COG0327 COG0327, Uncharacterized conserved protein Function unknown 163840530 Common - glycerol-3-phosphate dehydrogenase (NAD(P)+) RSal33209_1786 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 163839619 Common - transcriptional regulator, TetR family RSal33209_0867 4 COG1309 AcrR, Transcriptional regulator Transcription 163840554 Common - transcriptional regulator, GntR family RSal33209_1812 133 COG1802 GntR, Transcriptional regulators Transcription 163841231 Common - UDP-N-acetylmuramoylalanine--D-glutamate ligase RSal33209_2496 207 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 163842149 Common - hypothetical protein RSal33209_3431 6 None None None 163840741 Common ruvB holliday junction DNA helicase RSal33209_1999 218 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 163839184 Common - trehalose/maltose-binding protein RSal33209_0421 52 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163840110 Common - hypothetical protein RSal33209_1364 2 None None None 163841035 Pathogen - hypothetical protein RSal33209_2295 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 163838913 Common - alpha-galactosidase RSal33209_0148 38 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 163842084 Pathogen - alpha-L-fucosidase RSal33209_3365 1 None None None 163841859 Common - lactam utilization protein LAMB RSal33209_3132 101 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 163840989 Common - glucose-6-phosphate 1-dehydrogenase RSal33209_2249 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 163839836 Common - hypothetical protein RSal33209_1089 17 None None None 163841932 Common - pantoate--beta-alanine ligase RSal33209_3206 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 163842191 Common - transcriptional regulator, MerR family RSal33209_3473 47 COG0789 SoxR, Predicted transcriptional regulators Transcription 163838938 Common - isocitrate lyase RSal33209_0173 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 163840121 Common - iron dependent repressor RSal33209_1375 105 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 163840356 Common - UDP-N-acetylglucosamine 2-epimerase RSal33209_1611 154 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 163840649 Common dnaJ chaperone protein RSal33209_1907 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 163841412 Common - transporter, MFS superfamily RSal33209_2678 187 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841534 Common - IS994 RSal33209_2800 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839478 Common recA RecA recombinase RSal33209_0722 238 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 163840485 Pathogen - putative permease protein RSal33209_1740 1 None None None 163840824 Common - hypothetical protein RSal33209_2083 83 COG2307 COG2307, Uncharacterized protein conserved in bacteria Function unknown 163839755 Pathogen - hypothetical protein RSal33209_1006 2 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 163839910 Common oppA.3 oligopeptide-binding protein RSal33209_1163 74 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163841219 Common - ribosomal large subunit pseudouridine synthase D RSal33209_2484 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 163842168 Common - aldehyde dehydrogenase (NAD(P)+) RSal33209_3450 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163840270 Common - GtrA-like protein RSal33209_1525 10 COG2246 COG2246, Predicted membrane protein Function unknown 163841685 Common - serine/threonine protein phosphatase RSal33209_2954 67 COG0622 COG0622, Predicted phosphoesterase General function prediction only 163839865 Common traA.2 conjugal transfer protein RSal33209_1118 3 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 163842157 Common - electron transfer flavoprotein beta-subunit RSal33209_3439 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 163840943 Common - cell surface protein RSal33209_2202 12 None None None 163841802 Common - ABC transporter ATP-binding protein RSal33209_3072 245 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163841099 Pathogen - hypothetical protein RSal33209_2364 1 None None None 163839007 Pathogen - hypothetical membrane protein RSal33209_0242 1 None None None 163839273 Common - transcriptional regulator, TetR family RSal33209_0514 37 COG1309 AcrR, Transcriptional regulator Transcription 163839448 Common - 5'-methylthioadenosine phosphorylase RSal33209_0692 114 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 163840280 Common - peptidase, M20/M25/M40 family RSal33209_1535 80 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163841751 Pathogen - hypothetical protein RSal33209_3021 1 None None None 163841435 Common - O-succinylbenzoic acid--CoA ligase RSal33209_2701 216 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163842080 Common - Na(+)/H(+) antiporter RSal33209_3361 99 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 163841182 Common - glutamine synthetase RSal33209_2447 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 163838959 Pathogen - hypothetical protein RSal33209_0194 1 None None None 163839370 Common - oxidoreductase RSal33209_0613 57 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163840537 Common - 5-amino-6-(5-phosphoribosylamino)uracil reductase RSal33209_1793 26 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 163840299 Common - nucleoside-diphosphate-sugar epimerase RSal33209_1554 18 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163841659 Common - hypothetical protein RSal33209_2928 5 None None None 163841376 Common - amino acid transport ATP-binding protein RSal33209_2642 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 163840377 Common - hypothetical protein RSal33209_1632 3 None None None 163838995 Common oppA.1 oligopeptide-binding protein RSal33209_0230 116 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163841357 Common - IS994 RSal33209_2623 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841010 Common - phosphoglycerate kinase RSal33209_2270 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 163838999 Common - glucokinase regulatory protein RSal33209_0234 81 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 163840401 Common - DNA-binding protein RSal33209_1656 41 None None None 163840462 Common - isoamylase RSal33209_1717 161 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 163840038 Common - serine protease, trypsin family RSal33209_1292 6 None None None 163839961 Common - transcriptional regulator, TetR family RSal33209_1214 15 COG1309 AcrR, Transcriptional regulator Transcription 163840920 Common - transcriptional regulator, GntR family RSal33209_2179 114 COG2188 PhnF, Transcriptional regulators Transcription 163841575 Common - metal-dependent hydrolase RSal33209_2842 6 None None None 163839907 Pathogen - glyoxalase family protein RSal33209_1160 1 None None None 163842177 Common - hypothetical protein RSal33209_3459 2 None None None 163838952 Pathogen - hypothetical protein RSal33209_0187 1 None None None 163839771 Common - branched-chain amino acid aminotransferase RSal33209_1022 86 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 163840480 Common - phosphoglucosamine mutase RSal33209_1735 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 163841167 Pathogen - hypothetical protein RSal33209_2432 1 None None None 163841039 Common - SSU ribosomal protein S1P RSal33209_2299 223 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 163840233 Common - IS994 RSal33209_1488 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839314 Common - citrate lyase beta chain RSal33209_0556 113 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 163839026 Pathogen - hypothetical membrane protein RSal33209_0261 1 None None None 163841355 Common - ferredoxin--nitrite reductase RSal33209_2621 170 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 163839685 Common - citrate lyase beta chain RSal33209_0935 93 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 163841822 Pathogen - hypothetical protein RSal33209_3092 1 None None None 163842247 Common - hypothetical protein RSal33209_3529 2 COG4291 COG4291, Predicted membrane protein Function unknown 163841160 Common hrdB RNA polymerase principal sigma factor RSal33209_2425 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 163839634 Common - thioredoxin RSal33209_0882 227 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 163841004 Common - alkanesulfonate monooxygenase RSal33209_2264 54 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 163842075 Common - DNA polymerase III subunit gamma/tau RSal33209_3356 244 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 163839456 Common - membrane-bound lytic murein transglycosylase RSal33209_0700 17 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 163838905 Pathogen - MFS transporter RSal33209_0140 1 None None None 163839431 Common - IS994 RSal33209_0675 41 None None None 163838775 Common - DNA gyrase subunit B RSal33209_0006 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 163841014 Common - conserved hypothetical protein, UPF0052 RSal33209_2274 91 COG0391 COG0391, Uncharacterized conserved protein Function unknown 163841713 Common iscU IscU RSal33209_2982 80 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 163839998 Common - cholesterol esterase RSal33209_1252 5 None None None 163839131 Common - transcriptional regulator, GntR family RSal33209_0367 128 COG2188 PhnF, Transcriptional regulators Transcription 163840929 Common htpG chaperone protein RSal33209_2188 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 163839892 Common - Glycine betaine transport system permease protein RSal33209_1145 126 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 163841626 Common - anthranilate synthase component II RSal33209_2894 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 163840624 Common - putative peptidase RSal33209_1882 24 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163840346 Common - O-acetyl-L-homoserine sulfhydrolase RSal33209_1601 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 163842215 Common - glycerate kinase RSal33209_3497 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 163839194 Common - IS994 RSal33209_0434 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839426 Common - hypothetical protein RSal33209_0670 3 COG4331 COG4331, Predicted membrane protein Function unknown 163839630 Common - ABC transporter ATP-binding protein RSal33209_0878 2 None None None 163838849 Common - glutaryl-CoA dehydrogenase RSal33209_0084 148 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163840086 Common - GDP-mannose 4,6 dehydratase RSal33209_1340 200 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 163840603 Common - hypothetical protein RSal33209_1861 2 None None None 163840580 Common igiC arylmalonate decarboxylase RSal33209_1838 43 COG3473 COG3473, Maleate cis-trans isomerase Secondary metabolites biosynthesis, transport, and catabolism 163840215 Common - hypothetical protein RSal33209_1470 10 None None None 163839987 Common - methyltransferase RSal33209_1240 131 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 163841362 Common - transcriptional regulator, LysR family RSal33209_2628 182 COG0583 LysR, Transcriptional regulator Transcription 163839525 Common - membrane alanine aminopeptidase RSal33209_0769 33 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 163839814 Common - IS994 RSal33209_1067 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163838865 Common relE RelE RSal33209_0100 32 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 163842001 Common - membrane alanine aminopeptidase RSal33209_3278 165 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 163840852 Common - neutral zinc metallopeptidase family RSal33209_2111 85 COG2321 COG2321, Predicted metalloprotease General function prediction only 163840095 Common tadB flp pilus assembly protein RSal33209_1349 9 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 163842183 Common - transcriptional regulator, ROK family RSal33209_3465 173 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163839068 Common - succinate dehydrogenase membrane anchor subunit RSal33209_0303 16 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 163839943 Common - CBS domain containing protein RSal33209_1196 162 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 163840547 Common - hypothetical protein RSal33209_1805 10 None None None 163839660 Common - mannose-6-phosphate isomerase RSal33209_0908 38 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 163840264 Common - L-aspartate oxidase RSal33209_1519 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 163840709 Common - aspartate carbamoyltransferase RSal33209_1967 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 163841904 Common radA DNA repair protein RSal33209_3178 216 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 163839179 Common - IS994 RSal33209_0416 39 None None None 163838961 Pathogen - hypothetical membrane protein RSal33209_0196 1 None None None 163840474 Pathogen - hypothetical protein RSal33209_1729 1 None None None 163839191 Common - 1,4-alpha-glucan branching enzyme RSal33209_0428 150 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 163842003 Common - possible carbamoyl phosphate synthase- inactivated RSal33209_3280 8 None None None 163839225 Common - hypothetical membrane protein RSal33209_0466 3 None None None 163839234 Common - uracil-DNA glycosylase RSal33209_0475 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 163841392 Common - phenylacetyl-CoA 2-monooxygenase electron transfer component RSal33209_2658 128 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 163841736 Common - long-chain-fatty-acid--CoA ligase RSal33209_3006 213 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 163839206 Common - trehalose-6-phosphate synthase RSal33209_0446 97 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 163840781 Common - ATPases of the AAA+ class RSal33209_2039 249 COG1222 RPT1, ATP-dependent 26S proteasome regulatory subunit Posttranslational modification, protein turnover, chaperones 163840087 Common - GDP-mannose 4,6 dehydratase RSal33209_1341 220 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 163841553 Common - hypothetical protein RSal33209_2820 32 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 163840662 Common - hemolysin containing CBS domains RSal33209_1920 220 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 163841757 Common - hypothetical protein RSal33209_3027 18 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 163840171 Common - putative 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_1426 27 COG5373 COG5373, Predicted membrane protein Function unknown 163839996 Common - hypothetical protein RSal33209_1250 19 COG3662 COG3662, Uncharacterized protein conserved in bacteria Function unknown 163838958 Pathogen - two component system histidine kinase RSal33209_0193 1 None None None 163840501 Common - hypothetical membrane protein RSal33209_1757 11 COG3346 COG3346, Uncharacterized conserved protein Function unknown 163842073 Pathogen - enterochelin esterase RSal33209_3354 5 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 163840159 Common hrpA ATP-dependent helicase RSal33209_1413 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 163841468 Common - DNA topoisomerase I RSal33209_2734 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 163838871 Common - subtilisin-like protease RSal33209_0106 11 None None None 163839375 Common - acid phosphatase RSal33209_0618 7 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 163840529 Common - thiamine-monophosphate kinase RSal33209_1785 170 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 163839875 Common - NADPH-dependent oxidoreductase RSal33209_1128 44 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 163840657 Common - IS994 RSal33209_1915 39 None None None 163839538 Common argR arginine repressor RSal33209_0782 79 COG1438 ArgR, Arginine repressor Transcription 163840594 Common - glucose/fructose transport protein RSal33209_1852 84 None None None 163840939 Pathogen - hypothetical protein RSal33209_2198 1 None None None 163840362 Common glfT bifunctional udp-galactofuranosyl transferase RSal33209_1617 21 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 163839433 Common moaD putative molybdopterin cofactor synthesis protein RSal33209_0677 3 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 163839932 Common - lysine decarboxylase family RSal33209_1185 134 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 163842012 Common - mechanosensitive ion channel RSal33209_3289 180 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 163841253 Common - glucokinase RSal33209_2518 166 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163839080 Common - nucleoside transport ATP-binding protein RSal33209_0315 132 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 163840453 Pathogen - hypothetical protein RSal33209_1708 1 None None None 163841337 Pathogen - hypothetical protein RSal33209_2603 1 None None None 163841832 Common - guanine-hypoxanthine permease RSal33209_3105 92 COG2252 COG2252, Permeases General function prediction only 163839575 Common - hypothetical protein RSal33209_0822 2 None None None 163840293 Common - DNA excisionase, ATPase subunit RSal33209_1548 227 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 163838985 Common - FMN reductase RSal33209_0220 56 COG0431 COG0431, Predicted flavoprotein General function prediction only 163840456 Common - IS994 RSal33209_1711 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840673 Common lepA GTP-binding protein RSal33209_1931 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 163839389 Common - hypothetical protein RSal33209_0633 3 None None None 163839588 Common - gluconate transporter RSal33209_0835 76 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 163841212 Common - X-Pro dipeptidyl-peptidase (S15) family protein RSal33209_2477 19 COG2936 COG2936, Predicted acyl esterases General function prediction only 163841271 Common - hypothetical protein RSal33209_2536 28 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163839829 Common - putative RNA-binding protein RSal33209_1082 63 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 163839253 Common - cold shock protein RSal33209_0494 162 COG1278 CspC, Cold shock proteins Transcription 163839725 Common pspC.1 putative stress-responsive transcriptional regulator RSal33209_0975 8 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 163841744 Common - hypothetical cytosolic protein RSal33209_3014 14 None None None 163839775 Common - low molecular weight phosphotyrosine protein phosphatase RSal33209_1026 137 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 163842235 Common - hypothetical protein RSal33209_3517 2 None None None 163842252 Common oppA.6 oligopeptide-binding protein RSal33209_3534 121 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163840772 Common - D-serine/D-alanine/glycine transporter, APC family RSal33209_2030 108 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 163839937 Common - O-methyltransferase RSal33209_1190 92 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 163840358 Common - hypothetical membrane protein RSal33209_1613 3 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 163840932 Common - hypothetical protein RSal33209_2191 5 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 163840252 Common - fumarylacetoacetate (FAA) hydrolase family, demethylmenaquinone methyltransferase RSal33209_1507 184 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 163840117 Pathogen - hypothetical protein RSal33209_1371 1 None None None 163840196 Common - cold shock protein RSal33209_1451 180 COG1278 CspC, Cold shock proteins Transcription 163842266 Common - hypothetical protein RSal33209_3548 2 None None None 163840172 Common - arginyl-tRNA synthetase RSal33209_1427 247 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163841096 Common - carboxymethylenebutenolidase RSal33209_2357 98 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 163841728 Common - MoxR-like ATPase RSal33209_2998 170 COG0714 COG0714, MoxR-like ATPases General function prediction only 163842275 Common - ribonuclease P protein component RSal33209_3557 28 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 163841326 Common - ribosomal large subunit pseudouridine synthase B RSal33209_2592 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 163841739 Common - hypothetical protein RSal33209_3009 30 COG1714 COG1714, Predicted membrane protein/domain Function unknown 163841845 Common - hypothetical protein RSal33209_3118 3 None None None 163840308 Common - pyruvate dehydrogenase (cytochrome) RSal33209_1563 220 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 163839396 Common - hypothetical protein RSal33209_0640 17 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 163838901 Common - IS994 RSal33209_0136 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842167 Common - aldehyde dehydrogenase (NAD(P)+) RSal33209_3449 96 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163841046 Common - hypothetical protein RSal33209_2306 75 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 163839686 Common - hypothetical protein RSal33209_0936 3 None None None 163841134 Common - ISRs2 transposase RSal33209_2399 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163842224 Common - amino acid permease RSal33209_3506 148 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 163840446 Common - putative carbohydrate kinase RSal33209_1701 137 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163840104 Common ftsX cell division protein RSal33209_1358 105 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 163839612 Common - acetyltransferase, GNAT family RSal33209_0860 5 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163839753 Common - ABC-type cobalt transport system, permease protein RSal33209_1004 19 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 163841116 Common - low-specificity L-threonine aldolase RSal33209_2381 86 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 163838949 Common - glutarate-CoA ligase RSal33209_0184 98 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 163841288 Pathogen - hypothetical protein RSal33209_2553 1 None None None 163842124 Pathogen - beta-N-acetylhexosaminidase RSal33209_3405 1 None None None 163841174 Common - tolB protein precursor/tail-specific protease RSal33209_2439 40 COG4946 COG4946, Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system Function unknown 163839302 Common - hypothetical membrane protein RSal33209_0544 6 None None None 163841782 Common - threonine dehydratase RSal33209_3052 216 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 163841156 Common - transcriptional regulator, MecI family RSal33209_2421 14 COG3682 COG3682, Predicted transcriptional regulator Transcription 163840818 Common - putative carboxylesterase type B RSal33209_2077 47 COG2272 PnbA, Carboxylesterase type B Lipid metabolism 163841678 Common - hypothetical membrane protein RSal33209_2947 5 None None None 163839440 Common - hypothetical protein RSal33209_0684 4 None None None 163840025 Common tipA.2 transcriptional activator RSal33209_1279 34 COG0789 SoxR, Predicted transcriptional regulators Transcription 163840001 Common - signal peptidase I RSal33209_1255 136 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 163840812 Common - 3-oxoacyl-[acyl-carrier protein] reductase RSal33209_2071 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163841709 Common - hypothetical protein RSal33209_2978 2 None None None 163840448 Common - sugar ABC transporter RSal33209_1703 85 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163841241 Common - integral membrane protein RSal33209_2506 2 None None None 163839859 Pathogen - type IV secretion protein RSal33209_1112 1 None None None 163840606 Pathogen - hypothetical protein RSal33209_1864 1 None None None 163839578 Common - methylisocitrate lyase RSal33209_0825 131 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 163839893 Common - Glycine betaine transport system permease protein RSal33209_1146 136 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 163838820 Common - macrolide-efflux protein RSal33209_0054 128 None None None 163839016 Common livG branched-chain amino acid transport ATP-binding protein RSal33209_0251 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 163839869 Common - IS994 RSal33209_1122 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840763 Common - membrane protein implicated in regulation of membrane protease activity RSal33209_2021 19 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 163842138 Common - D-mannonate oxidoreductase RSal33209_3419 88 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 163842026 Common - hypothetical protein RSal33209_3304 8 None None None 163839597 Common - esterase RSal33209_0844 74 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 163840553 Common - proline iminopeptidase RSal33209_1811 18 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163841261 Common - 3-phytase precursor RSal33209_2526 31 COG4222 COG4222, Uncharacterized protein conserved in bacteria Function unknown 163840184 Common - undecaprenyl-phosphate alpha-N-acetyl-D-fucosaminephosphotransferase RSal33209_1439 59 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 163840928 Common - hypothetical protein RSal33209_2187 8 None None None 163840806 Common - copper-exporting ATPase RSal33209_2065 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 163839824 Common - hypothetical protein RSal33209_1077 6 None None None 163841104 Common - benzoate transport protein RSal33209_2369 49 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 163841144 Common - thymidine kinase RSal33209_2409 71 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 163842039 Pathogen - hypothetical protein RSal33209_3318 1 None None None 163842057 Common - linear gramicidin synthetase subunit C, putative RSal33209_3337 64 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163841549 Common - peptidase RSal33209_2816 56 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163841943 Common - hypothetical protein RSal33209_3217 8 None None None 163841254 Common - long-chain-fatty-acid--CoA ligase RSal33209_2519 216 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 163838876 Common - D-3-phosphoglycerate dehydrogenase RSal33209_0111 8 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 163842237 Common - Na+ driven multidrug efflux pump RSal33209_3519 170 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 163839052 Common - two-component response regulator RSal33209_0287 136 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 163840685 Common - glutathionylspermidine synthase family protein RSal33209_1943 52 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 163841367 Pathogen - hypothetical protein RSal33209_2633 1 None None None 163839533 Common - N-acetyl-gamma-glutamyl-phosphate reductase RSal33209_0777 213 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 163841565 Common - alanine dehydrogenase RSal33209_2832 164 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 163840333 Common - dihydroorotate dehydrogenase RSal33209_1588 224 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 163842093 Common purS phosphoribosylformylglycinamidine synthase RSal33209_3374 82 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 163840751 Common - pyridoxine biosynthesis protein RSal33209_2009 87 COG0214 SNZ1, Pyridoxine biosynthesis enzyme Coenzyme metabolism 163841190 Common glnP.2 glutamine transport permease protein RSal33209_2455 43 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163841268 Common - short chain dehydrogenase RSal33209_2533 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 163839992 Common - serine protease, trypsin family RSal33209_1246 5 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163841027 Common - ATP-dependent DNA helicase RSal33209_2287 130 COG4581 COG4581, Superfamily II RNA helicase DNA replication, recombination, and repair 163839861 Pathogen - type IV secretion protein RSal33209_1114 1 None None None 163840823 Common - transglutaminase-like enzyme, putative cysteine protease RSal33209_2082 82 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 163838942 Common - 3-hydroxyacyl-CoA dehydrogenase RSal33209_0177 8 None None None 163839152 Common - hypothetical protein RSal33209_0388 19 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 163841752 Pathogen - hypothetical protein RSal33209_3022 1 None None None 163839737 Common - LSU ribosomal protein L11P RSal33209_0988 245 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 163839086 Common - nucleoside transport system permease protein RSal33209_0321 108 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 163839449 Common moeA.2 molybdopterin biosynthesis protein RSal33209_0693 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 163841588 Common - putative TetR-family transcriptional regulator RSal33209_2855 15 COG1309 AcrR, Transcriptional regulator Transcription 163841979 Common - tryptophanyl-tRNA synthetase RSal33209_3254 239 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163839042 Common nodI ABC-2 type transporter ATPase RSal33209_0277 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163841995 Common - formamidopyrimidine-DNA glycosylase RSal33209_3272 168 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 163840166 Common - hypothetical protein RSal33209_1421 33 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 163840586 Common - glutaryl-CoA dehydrogenase RSal33209_1844 154 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163839071 Common - N-acyl-L-amino acid amidohydrolase RSal33209_0306 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 163838920 Common - transcriptional regulator, TetR family RSal33209_0155 30 COG1309 AcrR, Transcriptional regulator Transcription 163839625 Common - D-alanine--D-alanine ligase RSal33209_0873 211 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 163839699 Common - nitroreductase family protein RSal33209_0949 67 COG0778 NfnB, Nitroreductase Energy production and conversion 163839298 Common - hypothetical membrane protein RSal33209_0540 19 COG3162 COG3162, Predicted membrane protein Function unknown 163839690 Pathogen - hypothetical protein RSal33209_0940 1 None None None 163841475 Common - phenylalanyl-tRNA synthetase alpha chain RSal33209_2741 4 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 163841927 Common - transcriptional regulator, LacI family RSal33209_3201 126 COG1609 PurR, Transcriptional regulators Transcription 163839121 Common - sugar kinase RSal33209_0357 37 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163840876 Common - transcriptional regulator, TetR family protein RSal33209_2135 98 COG1309 AcrR, Transcriptional regulator Transcription 163838785 Common - glutamate racemase RSal33209_0018 185 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 163842226 Common - putrescine oxidase RSal33209_3508 77 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 163840374 Common - IS994 RSal33209_1629 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840678 Common - DNA polymerase III, delta subunit RSal33209_1936 27 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 163841748 Common whiB transcription factor RSal33209_3018 19 None None None 163839169 Common senX3 sensor-like histidine kinase RSal33209_0406 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 163840063 Pathogen - acetyltransferase, GNAT family RSal33209_1317 1 None None None 163840441 Common - O-sialoglycoprotein endopeptidase RSal33209_1696 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 163841702 Common - transcriptional regulator, LysR family RSal33209_2971 126 COG0583 LysR, Transcriptional regulator Transcription 163841541 Pathogen - hypothetical protein RSal33209_2807 1 None None None 163841009 Common - FMN reductase RSal33209_2269 122 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 163841671 Common - hypothetical protein RSal33209_2940 8 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 163839505 Common - transglycosylase associated protein RSal33209_0749 52 COG2261 COG2261, Predicted membrane protein Function unknown 163840520 Common - LSU ribosomal protein L32p family RSal33209_1776 6 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 163839761 Common - Sulfide dehydrogenase precursor RSal33209_1012 47 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 163841074 Common - hypothetical membrane protein RSal33209_2335 3 None None None 163841188 Common glnQ glutamine transport ATP-binding protein RSal33209_2453 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 163839309 Common - acetyl/propionyl CoA carboxylase, alpha subunit RSal33209_0551 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 163840742 Common ruvA holliday junction DNA helicase RSal33209_2000 209 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 163841593 Common - Fe3+-siderophore transport system permease RSal33209_2860 15 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 163841972 Common - GTP-binding protein OBG family RSal33209_3247 249 COG0536 Obg, Predicted GTPase General function prediction only 163841954 Common - prephenate dehydratase RSal33209_3228 212 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 163839498 Common - putative NAD-dependent epimerase/dehydratase RSal33209_0742 45 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163842207 Common - lipoate-protein ligase A RSal33209_3489 14 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 163839718 Common - predicted permease RSal33209_0968 3 None None None 163840139 Common - haloacetate dehalogenase H-1 RSal33209_1393 120 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163839882 Pathogen - hypothetical protein RSal33209_1135 1 None None None 163841854 Common - glycerophosphoryl diester phosphodiesterase RSal33209_3127 2 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 163839324 Common - IS994 RSal33209_0566 41 None None None 163839608 Common - glyoxalase/bleomycin resistance protein/dioxygenase superfamily RSal33209_0855 40 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 163838955 Pathogen - hypothetical protein RSal33209_0190 1 None None None 163841229 Common - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase RSal33209_2494 207 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 163840766 Common - polyprenyl-phosphate beta-D-mannosyltransferase RSal33209_2024 188 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 163839994 Pathogen - hypothetical protein RSal33209_1248 2 None None None 163839838 Common - Mg chelatase-related protein RSal33209_1091 188 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 163839094 Pathogen - acetyltransferase, GNAT family RSal33209_0329 1 None None None 163840464 Common - hypothetical protein RSal33209_1719 11 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 163839414 Common - aspartate aminotransferase RSal33209_0658 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 163840012 Common - hypothetical membrane protein RSal33209_1266 9 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 163841424 Common - 3-ketoacyl-CoA thiolase RSal33209_2690 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 163841915 Common - amino-acid acetyltransferase RSal33209_3189 102 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 163840089 Common - IS994 RSal33209_1343 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839939 Common - hypothetical membrane protein RSal33209_1192 2 None None None 163839564 Common - hemolysin A RSal33209_0811 131 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 163840235 Common - permease of the major facilitator superfamily RSal33209_1490 14 None None None 163842064 Common - cyclohexanone monooxygenase RSal33209_3344 55 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 163841827 Pathogen - hypothetical protein RSal33209_3097 1 None None None 163840792 Common - acyl-CoA dehydrogenase RSal33209_2050 48 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 163839275 Common - cystine transport system, permease protein RSal33209_0516 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 163840570 Common - transcriptional regulator RSal33209_1828 48 COG1414 IclR, Transcriptional regulator Transcription 163839521 Common - transcriptional regulator, MarR family RSal33209_0765 61 COG1846 MarR, Transcriptional regulators Transcription 163840577 Common - ABC1 family protein RSal33209_1835 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 163841987 Common - hypothetical protein RSal33209_3262 13 None None None 163839603 Common - transcriptional regulator, TetR family RSal33209_0850 25 COG1309 AcrR, Transcriptional regulator Transcription 163840019 Pathogen - HNH endonuclease family protein RSal33209_1273 1 None None None 163842217 Common - hypothetical protein RSal33209_3499 2 None None None 163838936 Pathogen - hypothetical protein RSal33209_0171 1 None None None 163839891 Common - Glycine betaine transport ATP-binding protein RSal33209_1144 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 163842195 Common - FAD dependent oxidoreductase RSal33209_3477 71 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 163839313 Common - MaoC-like protein RSal33209_0555 68 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163839051 Common - two-component response regulator RSal33209_0286 168 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163839929 Common gluD glutamate transport system permease protein RSal33209_1182 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 163840861 Common - LSU ribosomal protein L36P RSal33209_2120 135 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 163841820 Common - hypothetical protein RSal33209_3090 2 None None None 163842171 Common - methylenetetrahydrofolate reductase RSal33209_3453 141 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 163840344 Pathogen - homoserine O-acetyltransferase RSal33209_1599 1 None None None 163840868 Common - methionine aminopeptidase RSal33209_2127 238 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 163842109 Common - adenylosuccinate synthetase RSal33209_3390 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 163840067 Common - histidine ammonia-lyase RSal33209_1321 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 163840080 Pathogen - hypothetical protein RSal33209_1334 1 None None None 163839137 Common - carbon starvation protein A RSal33209_0373 20 None None None 163842048 Pathogen - hypothetical protein RSal33209_3327 1 None None None 163841123 Common dpiB.2 sensor kinase RSal33209_2388 10 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 163842060 Common - peptide synthetase RSal33209_3340 20 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163839175 Common trmH 23S rRNA methyltransferase TrmH, group 3 RSal33209_0412 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 163839098 Common - predicted septum formation initiator RSal33209_0333 18 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 163840217 Common - metal-dependent hydrolases of the beta-lactamase superfamily III RSal33209_1472 85 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 163840036 Common - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B RSal33209_1290 211 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 163840565 Common - acetyltransferase, GNAT family RSal33209_1823 90 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163841922 Common lsr2 Lsr2 protein RSal33209_3196 17 None None None 163841907 Common - A/G-specific adenine DNA glycosylase RSal33209_3181 196 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 163840643 Common - serine protease, trypsin family RSal33209_1901 29 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163841787 Pathogen - hypothetical protein RSal33209_3057 1 None None None 163839180 Common - IS994 RSal33209_0417 132 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840210 Common - superfamily II DNA and RNA helicase RSal33209_1465 48 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 163840973 Common - IS994 RSal33209_2233 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840492 Common - hypothetical protein RSal33209_1748 2 None None None 163841857 Common - allophanate hydrolase subunit 2 RSal33209_3130 109 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 163840127 Common - predicted GTPase RSal33209_1381 163 COG1162 COG1162, Predicted GTPases General function prediction only 163841624 Common - serine/threonine protein kinase RSal33209_2892 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 163840497 Common - hypothetical protein RSal33209_1753 12 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 163842086 Common - D-arabinonolactonase RSal33209_3367 47 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 163839454 Common - hypothetical membrane protein RSal33209_0698 11 None None None 163841058 Common dppC.4 dipeptide transport system permease protein RSal33209_2318 217 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163839182 Common nrdI.1 NrdI RSal33209_0419 39 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 163840831 Common - lipoate-protein ligase A RSal33209_2090 76 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 163841497 Common - IS994 RSal33209_2763 30 None None None 163838895 Common - IS994 RSal33209_0130 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840359 Common - acyltransferase domain RSal33209_1614 99 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 163841306 Common - transcriptional regulator, PadR family protein RSal33209_2572 39 COG1695 COG1695, Predicted transcriptional regulators Transcription 163840780 Common - putative proteasome component RSal33209_2038 16 None None None 163840424 Common - LSU ribosomal protein L36P RSal33209_1679 27 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 163841237 Common mraW S-adenosyl-methyltransferase RSal33209_2502 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 163841088 Common pnuX riboflavin transporter RSal33209_2349 52 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 163840041 Common - IS994 RSal33209_1295 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840983 Common - ABC-type multidrug transport system, permease component RSal33209_2243 13 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 163841812 Common - trehalose/maltose-binding protein RSal33209_3082 73 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 163838860 Common - 4-carboxymuconolactone decarboxylase RSal33209_0095 87 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 163839912 Common oppC oligopeptide transporter, permease protein RSal33209_1165 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841016 Common - excinuclease ABC subunit C RSal33209_2276 224 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 163841808 Common - transcriptional regulator, LacI family RSal33209_3078 122 COG1609 PurR, Transcriptional regulators Transcription 163838970 Common - Na+/solute symporter RSal33209_0205 7 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 163839187 Common - sugar ABC transporter, permease component RSal33209_0424 166 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 163841007 Common - hypothetical protein RSal33209_2267 15 None None None 163841042 Common - DNA polymerase I RSal33209_2302 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 163838915 Common - glutathione peroxidase RSal33209_0150 112 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 163839029 Common - L-arabinose transport ATP-binding protein RSal33209_0264 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 163839805 Common - two-component sensor kinase RSal33209_1058 2 None None None 163842028 Common - oligoribonuclease RSal33209_3306 89 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 163840103 Common ftsE cell division ATP-binding protein RSal33209_1357 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 163842241 Common - hypothetical cytosolic protein RSal33209_3523 15 None None None 163841139 Common - hypothetical protein RSal33209_2404 19 None None None 163841801 Common - hypothetical membrane spanning protein RSal33209_3071 6 None None None 163839729 Common - two-component response regulator RSal33209_0979 179 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163838977 Common - multidrug efflux protein RSal33209_0212 30 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163840283 Common - transcriptional regulator, MarR family RSal33209_1538 12 COG1846 MarR, Transcriptional regulators Transcription 163840093 Common cpaF flp pilus assembly protein, ATPase RSal33209_1347 136 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 163841770 Common - phosphohydrolase (MutT/nudix family protein) RSal33209_3040 75 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163840144 Common - ABC transporter, solute binding protein RSal33209_1398 132 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 163841895 Common - haemolysin RSal33209_3168 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 163839904 Common - RmuC family protein RSal33209_1157 109 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 163839044 Common nodJ.2 ABC-2 type transporter RSal33209_0279 64 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 163839189 Common - trehalose synthase RSal33209_0426 162 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163839928 Common - tetrahydropicolinate succinylase RSal33209_1181 36 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 163840719 Common - hypothetical protein RSal33209_1977 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 163841520 Common - ABC transporter, permease protein RSal33209_2786 139 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163839734 Common - aspartate aminotransferase RSal33209_0984 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 163840408 Common dppB.3 dipeptide transport system permease protein RSal33209_1663 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841693 Common - FAD-dependent monooxygenase RSal33209_2962 62 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163842158 Common - 3-hydroxyacyl-CoA dehydrogenase RSal33209_3440 161 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 163841490 Common - hypothetical protein RSal33209_2756 14 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 163840045 Common - short-chain dehydrogenase RSal33209_1299 119 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840140 Common - inosine-5'-monophosphate dehydrogenase RSal33209_1394 234 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 163841030 Pathogen - transporter, MFS superfamily RSal33209_2290 1 None None None 163840592 Common - 3-hydroxyisobutyryl-CoA hydrolase RSal33209_1850 159 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 163839339 Common - copper chaperone RSal33209_0581 7 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 163838853 Common - hypothetical protein RSal33209_0088 36 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 163840211 Common - threonyl-tRNA synthetase RSal33209_1466 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163840050 Common - carboxypeptidase G2 precursor RSal33209_1304 47 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163838783 Common - rhomboid family membrane protein RSal33209_0016 146 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 163839905 Common - GTP-binding protein RSal33209_1158 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 163840632 Common - hypothetical protein RSal33209_1890 6 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 163840381 Common - hypothetical protein RSal33209_1636 31 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 163840510 Common - hypothetical membrane protein RSal33209_1766 32 COG1808 COG1808, Predicted membrane protein Function unknown 163839424 Common - FMN adenylyltransferase RSal33209_0668 211 COG0196 RibF, FAD synthase Coenzyme metabolism 163840902 Common - SSU ribosomal protein S19P RSal33209_2161 240 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 163839004 Common - predicted O-Glycosyl hydrolase, family 3 RSal33209_0239 181 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 163842139 Common - uronate isomerase RSal33209_3420 23 COG1904 UxaC, Glucuronate isomerase Carbohydrate transport and metabolism 163841630 Common - citrate synthase RSal33209_2898 90 COG0372 GltA, Citrate synthase Energy production and conversion 163841202 Common - IS994 RSal33209_2467 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841448 Common - glutaredoxin RSal33209_2714 17 None None None 163838878 Common - ABC-type sugar transport system, permease component RSal33209_0113 9 COG4209 LplB, ABC-type polysaccharide transport system, permease component Carbohydrate transport and metabolism 163841777 Common - conserved membrane protein (hemolysin III-like protein) RSal33209_3047 102 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 163839364 Common - hypothetical protein RSal33209_0606 8 None None None 163841313 Common - transcriptional regulator RSal33209_2579 25 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 163841482 Common - ATP-dependent helicase RSal33209_2748 57 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 163842190 Common - transcriptional regulator, MerR family RSal33209_3472 9 COG4978 COG4978, Transcriptional regulator, effector-binding domain/component Transcription / Signal transduction mechanisms 163841353 Common - phosphoadenosine phosphosulfate reductase RSal33209_2619 159 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 163841872 Pathogen - phosphoenolpyruvate-protein phosphotransferase RSal33209_3145 1 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 163838888 Common - hypothetical protein RSal33209_0123 96 COG2135 COG2135, Uncharacterized conserved protein Function unknown 163841985 Common - short chain dehydrogenase RSal33209_3260 55 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163838814 Common - two-component response regulator RSal33209_0048 200 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163839782 Common - thioredoxin peroxidase RSal33209_1034 213 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 163841636 Common - IS994 RSal33209_2904 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840840 Common - hypothetical protein RSal33209_2099 8 None None None 163841273 Common - transcriptional regulator, TetR family RSal33209_2538 52 COG1309 AcrR, Transcriptional regulator Transcription 163841764 Common - multidrug resistance protein B RSal33209_3034 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841583 Pathogen - hypothetical protein RSal33209_2850 1 None None None 163842103 Common - IS994 RSal33209_3384 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839358 Common - glutamine amidotransferase, class I RSal33209_0600 118 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 163840735 Common - hypothetical protein RSal33209_1993 36 None None None 163841132 Common - TRAM domain RSal33209_2397 174 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 163839547 Common - transcriptional regulator, LuxR family RSal33209_0791 29 COG3903 COG3903, Predicted ATPase General function prediction only 163841969 Common - hypothetical protein RSal33209_3244 2 None None None 163839773 Common - luciferase-like monooxygenase RSal33209_1024 81 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 163841656 Common - oxidoreductase RSal33209_2925 42 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 163839555 Pathogen - hypothetical protein RSal33209_0799 1 None None None 163839359 Common - glutamine synthetase RSal33209_0601 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 163838847 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_0082 195 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 163840916 Pathogen - gluconate transporter RSal33209_2175 1 None None None 163842032 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_3311 22 None None None 163839846 Common - 3-oxoacyl-[acyl-carrier-protein] synthase I RSal33209_1099 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163839808 Common - branched-chain amino acid aminotransferase RSal33209_1061 211 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 163840755 Common - transcriptional regulator, GntR family RSal33209_2013 65 COG2186 FadR, Transcriptional regulators Transcription 163839617 Common - permease transporter, MFS family RSal33209_0865 8 None None None 163838873 Pathogen - hypothetical membrane protein RSal33209_0108 1 None None None 163839545 Common - antibiotic export permease protein RSal33209_0789 157 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 163840700 Common - DNA-directed RNA polymerase omega chain RSal33209_1958 20 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 163839473 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RSal33209_0717 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 163839702 Pathogen - hypothetical protein RSal33209_0952 1 None None None 163838867 Common - hypothetical protein RSal33209_0102 2 None None None 163841242 Common - DNA polymerase IV RSal33209_2507 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 163839033 Common - formyltetrahydrofolate deformylase RSal33209_0268 209 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 163839952 Common - hypothetical protein RSal33209_1205 14 None None None 163840857 Common - LSU ribosomal protein L17 RSal33209_2116 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 163840226 Common - ABC transporter ATP-binding protein RSal33209_1481 210 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163840227 Common - hypothetical protein RSal33209_1482 5 None None None 163841349 Common - hypothetical protein RSal33209_2615 3 None None None 163839965 Common - glutamyl-tRNA reductase RSal33209_1218 175 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 163840849 Common - cobalt permease-like transporter RSal33209_2108 20 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 163839989 Common - PDZ domain-containing protein RSal33209_1242 32 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 163841382 Common napC NapC RSal33209_2648 54 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841886 Common - ferredoxin--NADP reductase RSal33209_3159 188 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 163839553 Common - putative NAD-dependent epimerase/dehydrogenase RSal33209_0797 101 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163840296 Pathogen - gram positive anchor domain protein RSal33209_1551 1 None None None 163842264 Common - phosphohydrolase (MutT/nudix family protein) RSal33209_3546 56 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 163839141 Common - hypothetical membrane protein RSal33209_0377 2 None None None 163841417 Common - hypothetical protein RSal33209_2683 2 None None None 163838891 Pathogen - hypothetical protein RSal33209_0126 1 None None None 163841865 Common - transcriptional regulator RSal33209_3138 103 COG2378 COG2378, Predicted transcriptional regulator Transcription 163841881 Pathogen - hypothetical protein RSal33209_3154 1 None None None 163838810 Common - transcriptional regulator, TetR family RSal33209_0044 24 COG1309 AcrR, Transcriptional regulator Transcription 163840204 Common - ABC transporter, ATP-binding protein RSal33209_1459 248 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 163841340 Common - transcriptional regulator RSal33209_2606 41 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 163839391 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase RSal33209_0635 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 163839523 Common - hypothetical protein RSal33209_0767 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 163841328 Common scpA segregation and condensation protein RSal33209_2594 123 COG1354 COG1354, Uncharacterized conserved protein Function unknown 163841941 Common ftsH cell division protein RSal33209_3215 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 163840266 Common - cysteine desulfhydrase RSal33209_1521 234 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 163839170 Common regX3 two-component response regulator RSal33209_0407 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 163839831 Common - tRNA (guanine-N1)-methyltransferase RSal33209_1084 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 163840707 Common - hypothetical protein RSal33209_1965 10 None None None 163841454 Pathogen - putative transcriptional regulator RSal33209_2720 1 COG1474 CDC6, Cdc6-related protein, AAA superfamily ATPase DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones 163839674 Common - hydrolase, alpha/beta fold superfamily RSal33209_0922 18 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 163841460 Common ktrA potassium uptake protein RSal33209_2726 101 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 163840893 Common - LSU ribosomal protein L24P RSal33209_2152 210 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 163841755 Common - transcriptional regulator, LytR family RSal33209_3025 53 COG1316 LytR, Transcriptional regulator Transcription 163841295 Common - hypothetical protein RSal33209_2560 15 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 163842142 Common - alanine dehydrogenase RSal33209_3423 129 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 163840980 Common - transcriptional regulator, DeoR family RSal33209_2240 49 COG2345 COG2345, Predicted transcriptional regulator Transcription 163839261 Common - HNH endonuclease family protein RSal33209_0502 95 COG1403 McrA, Restriction endonuclease Defense mechanisms 163841609 Common - SSU ribosomal protein S14P RSal33209_2876 194 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 163839790 Common - acetolactate synthase large subunit RSal33209_1043 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 163838910 Common - hypothetical protein RSal33209_0145 26 COG3662 COG3662, Uncharacterized protein conserved in bacteria Function unknown 163841446 Common - hypothetical protein RSal33209_2712 2 None None None 163841210 Common - short chain dehydrogenase RSal33209_2475 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840327 Common - cytochrome c oxidase polypeptide IV RSal33209_1582 18 COG2851 CitM, H+/citrate symporter Energy production and conversion 163838908 Common - NADPH-dependent fmn reductase RSal33209_0143 14 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 163840955 Common - deoxycytidine triphosphate deaminase RSal33209_2214 164 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 163839372 Common - hypothetical protein RSal33209_0615 10 COG2186 FadR, Transcriptional regulators Transcription 163839958 Common thiG thiazole biosynthesis protein RSal33209_1211 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 163839581 Common - translation initiation inhibitor RSal33209_0828 177 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 163840589 Common - transcriptional regulator, MarR family RSal33209_1847 55 COG1846 MarR, Transcriptional regulators Transcription 163842178 Pathogen - hypothetical protein RSal33209_3460 1 None None None 163841769 Pathogen - hypothetical protein RSal33209_3039 1 None None None 163842014 Common - hypothetical protein RSal33209_3291 5 None None None 163839088 Common - thymidine phosphorylase RSal33209_0323 84 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 163840186 Common - hypothetical protein RSal33209_1441 2 None None None 163840675 Common - SSU ribosomal protein S20P RSal33209_1933 201 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 163840057 Common dppD dipeptide transport ATP-binding protein RSal33209_1311 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840936 Common - hypothetical protein RSal33209_2195 2 None None None 163840559 Common - sarcosine oxidase beta subunit RSal33209_1817 172 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 163839806 Pathogen - two-component sensor kinase RSal33209_1059 1 None None None 163841591 Pathogen - Fe3+-siderophore transport system permease RSal33209_2858 1 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 163841834 Pathogen - hypothetical protein RSal33209_3107 1 None None None 163842261 Pathogen - hypothetical protein RSal33209_3543 1 None None None 163840106 Common - SsrA-binding protein RSal33209_1360 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 163839035 Pathogen - hypothetical protein RSal33209_0270 2 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163839344 Common - sorbitol/mannitol transport inner membrane protein RSal33209_0586 117 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840859 Common - SSU ribosomal protein S11P RSal33209_2118 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 163839573 Common - alcohol dehydrogenase, Zn-binding RSal33209_0820 172 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 163840704 Common lmrB lincomycin resistance protein RSal33209_1962 183 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163842050 Pathogen - hypothetical protein RSal33209_3329 1 COG2898 COG2898, Uncharacterized conserved protein Function unknown 163840753 Common - adenosine 5'-monophosphoramidase, HIT domain RSal33209_2011 109 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 163842110 Pathogen - hypothetical protein RSal33209_3391 1 None None None 163841721 Common - transcriptional regulator, TetR family RSal33209_2991 14 None None None 163840774 Common - FKBP-type peptidyl-prolyl cis-trans isomerase RSal33209_2032 149 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 163840174 Common - homoserine dehydrogenase RSal33209_1429 209 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 163841734 Common - long-chain-fatty-acid--CoA ligase RSal33209_3004 3 None None None 163840568 Common - phenol 2-monooxygenase RSal33209_1826 61 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163840964 Common - transporter, MFS superfamily RSal33209_2224 128 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 163841285 Common hmuV hemin transport system ATP-binding protein RSal33209_2550 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 163839159 Common - secretory peptidase RSal33209_0396 37 None None None 163841002 Common - acetyltransferase, GNAT family RSal33209_2262 45 COG0456 RimI, Acetyltransferases General function prediction only 163838826 Pathogen - hypothetical membrane protein RSal33209_0060 1 COG2246 COG2246, Predicted membrane protein Function unknown 163842273 Common - inner membrane protein RSal33209_3555 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 163839610 Common yajQ YajQ RSal33209_0857 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 163841186 Common - HSP18 transcription regulator RSal33209_2451 5 None None None 163841114 Common - hypothetical protein RSal33209_2379 6 None None None 163839167 Common - phosphoglycerate mutase RSal33209_0404 150 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 163841737 Common - integral membrane protein, putative RSal33209_3007 10 COG4478 COG4478, Predicted membrane protein Function unknown 163840254 Common - hydrolase, alpha/beta fold superfamily RSal33209_1509 74 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 163840444 Common - hypothetical protein RSal33209_1699 198 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 163839251 Common - hypothetical protein RSal33209_0492 4 None None None 163841239 Common oppA.4 oligopeptide-binding protein RSal33209_2504 6 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163842228 Common - hypothetical protein RSal33209_3510 2 None None None 163839780 Common - putative lipoprotein RSal33209_1031 3 None None None 163839428 Common - polyribonucleotide nucleotidyltransferase RSal33209_0672 236 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 163840198 Common - putative nuclease, RecB family RSal33209_1453 39 COG1637 COG1637, Predicted nuclease of the RecB family DNA replication, recombination, and repair 163840061 Common - carboxypeptidase G2 precursor RSal33209_1315 17 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 163841286 Common hmuT hemin-binding periplasmic protein RSal33209_2551 90 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 163838851 Pathogen - hypothetical protein RSal33209_0086 1 None None None 163841502 Common - acetyl-coenzyme A synthetase RSal33209_2768 206 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 163841906 Common - Membrane lipoprotein RSal33209_3180 10 None None None 163839566 Common recN DNA repair protein RSal33209_0813 198 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 163841364 Common - sirohydrochlorin cobaltochelatase RSal33209_2630 14 COG2138 COG2138, Uncharacterized conserved protein Function unknown 163840930 Common - hypothetical protein RSal33209_2189 5 COG1592 COG1592, Rubrerythrin Energy production and conversion 163838796 Common - phosphoenolpyruvate carboxykinase (GTP) RSal33209_0029 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 163840517 Common smc.2 chromosome segregation protein RSal33209_1773 178 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 163840827 Common - hypothetical membrane protein RSal33209_2086 101 COG2855 COG2855, Predicted membrane protein Function unknown 163839133 Common - IS994 RSal33209_0369 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839658 Common - transcriptional regulator, LacI family RSal33209_0906 122 COG1609 PurR, Transcriptional regulators Transcription 163839118 Common - multidrug resistance ABC transporter ATP-binding and permease protein RSal33209_0354 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163842122 Common - beta-N-acetylhexosaminidase RSal33209_3403 41 COG3525 Chb, N-acetyl-beta-hexosaminidase Carbohydrate transport and metabolism 163840974 Common - IS994 RSal33209_2234 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839666 Common - potassium-transporting ATPase B chain RSal33209_0914 230 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 163840545 Common - malonate-semialdehyde dehydrogenase (acetylating) RSal33209_1803 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163842268 Common - thioredoxin RSal33209_3550 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 163841518 Common - ABC-type sugar transport system, periplasmic component RSal33209_2784 53 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163839970 Common - porphobilinogen deaminase RSal33209_1223 220 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 163842005 Common - hypothetical protein RSal33209_3282 8 None None None 163840207 Common - integral membrane transport protein RSal33209_1462 6 None None None 163839752 Common - ABC transporter, ATP-binding protein RSal33209_1003 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 163841419 Common comA2 ComA operon protein 2 RSal33209_2685 70 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 163839377 Common - putative quinone oxidoreductase RSal33209_0621 178 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 163838787 Common - transcriptional regulator, TetR family RSal33209_0020 14 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 163839867 Common - putative site-specific recombinase, resolvase family RSal33209_1120 51 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 163840150 Common - hypothetical protein RSal33209_1404 22 None None None 163839204 Common - sugar transport ATP-binding protein RSal33209_0444 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 163840340 Common - IS994 RSal33209_1595 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841602 Common - citrate-proton symporter RSal33209_2869 31 COG2851 CitM, H+/citrate symporter Energy production and conversion 163840244 Common - phenol 2-monooxygenase large subunit RSal33209_1499 50 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 163839644 Common - transcriptional regulator, LysR family RSal33209_0892 186 COG0583 LysR, Transcriptional regulator Transcription 163840157 Pathogen - transcriptional regulator RSal33209_1411 2 COG3832 COG3832, Uncharacterized conserved protein Function unknown 163840476 Common - glucosamine--fructose-6-phosphate aminotransferase (isomerizing) RSal33209_1731 237 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 163840664 Common - PhoH-like protein RSal33209_1922 198 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 163842059 Common - peptide synthetase RSal33209_3339 2 None None None 163840926 Common - DNA-directed RNA polymerase beta' chain RSal33209_2185 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 163842111 Pathogen - hypothetical protein RSal33209_3392 1 None None None 163841369 Common - farnesyl pyrophosphate synthetase RSal33209_2635 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 163841653 Common - short-chain fatty acids transporter RSal33209_2922 38 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 163839236 Common - hypothetical protein RSal33209_0477 16 None None None 163841248 Common - hypothetical protein RSal33209_2513 7 None None None 163840206 Common - integral membrane transport protein RSal33209_1461 4 None None None 163839248 Common - DNA/RNA helicase (DEAD/DEAH box family) RSal33209_0489 19 None None None 163838983 Common - protein CDC27Hs RSal33209_0218 2 None None None 163842259 Common - phytoene dehydrogenase-like protein RSal33209_3541 52 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163839461 Common - hypothetical membrane protein RSal33209_0705 5 None None None 163839435 Common - molybdate ABC transporter, periplasmic molybdate-binding protein RSal33209_0679 115 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 163840364 Common - hypothetical protein RSal33209_1619 2 None None None 163841091 Common - 16S rRNA m(5)C 967 methyltransferase RSal33209_2352 200 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 163839237 Common - hypothetical protein RSal33209_0478 2 None None None 163841560 Pathogen - hypothetical protein RSal33209_2827 1 None None None 163840386 Common mtrB two component system histidine kinase RSal33209_1641 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 163842151 Common - IS994 RSal33209_3433 41 None None None 163839959 Common - hypothetical protein RSal33209_1212 2 None None None 163840952 Common - transporter, MFS superfamily RSal33209_2211 54 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 163841266 Common - glycine cleavage system H protein RSal33209_2531 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 163841961 Common - hypothetical protein RSal33209_3235 13 None None None 163838829 Common - isochorismatase family protein RSal33209_0063 70 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 163840584 Common - transcriptional regulator, TetR family RSal33209_1842 112 COG1309 AcrR, Transcriptional regulator Transcription 163840115 Common - IS994 RSal33209_1369 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841196 Pathogen - hypothetical protein RSal33209_2461 1 None None None 163841056 Common dppF.2 dipeptide transport ATP-binding protein RSal33209_2316 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 163842239 Common - replicative DNA helicase RSal33209_3521 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 163839935 Common - hypothetical protein RSal33209_1188 15 COG5542 COG5542, Predicted integral membrane protein Function unknown 163842233 Common - putative N-acetylglucosamine kinase # RSal33209_3515 28 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 163841379 Common - PAP2 superfamily protein RSal33209_2645 8 None None None 163840716 Common - shikimate kinase RSal33209_1974 198 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 163839096 Common - transcriptional regulator PadR-like family RSal33209_0331 60 COG1695 COG1695, Predicted transcriptional regulators Transcription 163839264 Common - predicted molybdopterin-guanine dinucleotide biosynthesis protein A RSal33209_0505 4 None None None 163839041 Common - MMPL family transporter RSal33209_0276 50 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 163839515 Common - hypothetical protein RSal33209_0759 72 COG2968 COG2968, Uncharacterized conserved protein Function unknown 163839198 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase RSal33209_0438 215 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 163839496 Common - hypothetical protein RSal33209_0740 8 None None None 163841018 Common - putative phosphatase RSal33209_2278 176 COG0546 Gph, Predicted phosphatases General function prediction only 163839296 Common - two-component response regulator RSal33209_0538 190 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 163842184 Common - phosphotransferase RSal33209_3466 21 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 163841105 Common - benzoate transport protein RSal33209_2370 55 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 163841750 Common - monosaccharide translocase (flippase type) RSal33209_3020 22 COG2246 COG2246, Predicted membrane protein Function unknown 163840422 Common - methyltransferase RSal33209_1677 29 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 163838973 Pathogen - hypothetical protein RSal33209_0208 1 None None None 163840744 Common - hypothetical protein RSal33209_2002 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 163841956 Common - peptidase E RSal33209_3230 17 COG3340 PepE, Peptidase E Amino acid transport and metabolism 163839294 Common - sodium/proline transporter RSal33209_0536 117 COG4147 DhlC, Predicted symporter General function prediction only 163841669 Common - ABC transporter ATP-binding protein RSal33209_2938 31 COG4637 COG4637, Predicted ATPase General function prediction only 163841509 Common - sugar transporter sugar binding protein RSal33209_2775 73 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163839884 Common - nitropropane dioxygenase RSal33209_1137 110 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 163839503 Common - LSU ribosomal protein L20P RSal33209_0747 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 163841531 Pathogen - hypothetical protein RSal33209_2797 1 None None None 163840431 Common - hypothetical membrane protein RSal33209_1686 59 COG1434 COG1434, Uncharacterized conserved protein Function unknown 163839898 Common - IS994 RSal33209_1151 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839741 Common - acetyltransferase RSal33209_0992 5 COG0456 RimI, Acetyltransferases General function prediction only 163838922 Common - NAD-dependent oxidoreductase RSal33209_0157 12 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163839732 Common - ISRs2 transposase RSal33209_0982 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841847 Common - IS994 RSal33209_3120 41 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839816 Common ftsY signal recognition particle receptor RSal33209_1069 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 163841704 Common - hypothetical protein RSal33209_2973 7 None None None 163839285 Common - SSU ribosomal protein S2P RSal33209_0527 221 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 163842248 Pathogen - hypothetical protein RSal33209_3530 1 None None None 163839748 Common - IS994 RSal33209_0999 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840047 Common - threonine 3-dehydrogenase RSal33209_1301 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 163840389 Common - hypothetical membrane protein RSal33209_1644 10 None None None 163840504 Common - PTS system, fructose-specific IIABC component RSal33209_1760 99 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 163840825 Common - hypothetical protein RSal33209_2084 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 163839850 Common - transcriptional regulator RSal33209_1103 20 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 163840844 Common - ABC transporter ATP-binding protein RSal33209_2103 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 163840652 Common - tetR-family transcriptional regulator RSal33209_1910 7 None None None 163841585 Common - thioesterase RSal33209_2852 25 COG0824 FcbC, Predicted thioesterase General function prediction only 163840274 Common - phosphonates transport system permease RSal33209_1529 86 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 163841256 Common - ATPases involved in chromosome partitioning RSal33209_2521 10 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163841161 Common - hypothetical protein RSal33209_2426 2 None None None 163840336 Common - undecaprenyl pyrophosphate synthetase RSal33209_1591 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 163840598 Common - hypothetical membrane protein RSal33209_1856 11 None None None 163839643 Pathogen - transcriptional regulator, LysR family RSal33209_0891 1 None None None 163841374 Common - ABC transporter amino acid-binding protein RSal33209_2640 153 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163842091 Pathogen - hypothetical protein RSal33209_3372 1 None None None 163839853 Common - pyruvate dehydrogenase E1 component RSal33209_1106 156 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 163839418 Common - hypothetical membrane protein RSal33209_0662 12 None None None 163841579 Common - hypothetical protein RSal33209_2846 21 COG0824 FcbC, Predicted thioesterase General function prediction only 163841551 Common - hypothetical protein RSal33209_2818 5 None None None 163841558 Common - potassium/proton antiporter RSal33209_2825 4 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 163839002 Common - transcriptional regulator, RpiR family RSal33209_0237 88 COG1737 RpiR, Transcriptional regulators Transcription 163839822 Common - signal recognition particle protein RSal33209_1075 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 163840399 Common - hypothetical protein RSal33209_1654 15 None None None 163840604 Common - amidophosphoribosyltransferase RSal33209_1862 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 163838791 Pathogen - hypothetical protein RSal33209_0024 1 None None None 163840816 Pathogen - hypothetical protein RSal33209_2075 1 None None None 163839405 Common - predicted permease RSal33209_0649 96 COG0730 COG0730, Predicted permeases General function prediction only 163840722 Common - hypothetical protein RSal33209_1980 5 None None None 163841394 Common paaC phenylacetic acid degradation protein RSal33209_2660 42 COG3396 COG3396, Uncharacterized conserved protein Function unknown 163840003 Common - rhodanese-related sulfurtransferase RSal33209_1257 42 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 163840918 Common - oxidoreductase RSal33209_2177 5 None None None 163839108 Common - hypothetical membrane protein RSal33209_0344 2 COG3371 COG3371, Predicted membrane protein Function unknown 163839692 Common - hypothetical protein RSal33209_0942 33 COG2030 MaoC, Acyl dehydratase Lipid metabolism 163841913 Pathogen - probable conserved transmembrane protein RSal33209_3187 1 None None None 163840016 Common - ABC transporter, ATP binding protein RSal33209_1270 237 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 163840071 Common - imidazolonepropionase RSal33209_1325 98 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 163842197 Common - cyclopropane-fatty-acyl-phospholipid synthase RSal33209_3479 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 163839227 Common - hypothetical protein RSal33209_0468 2 None None None 163841774 Common - hypothetical protein RSal33209_3044 2 None None None 163840795 Common - glucan endo-1,3-beta-glucosidase RSal33209_2054 4 None None None 163840645 Common - serine protease, trypsin family RSal33209_1903 19 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 163840775 Common - FKBP-type peptidyl-prolyl cis-trans isomerase RSal33209_2033 116 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 163840148 Common - metal-dependent hydrolase RSal33209_1402 16 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 163840949 Common phaD potassium efflux system protein RSal33209_2208 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 163839535 Common - acetylglutamate kinase RSal33209_0779 218 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 163841142 Common - conserved hypothetical protein, dUTPase RSal33209_2407 19 None None None 163838934 Common - malate synthase RSal33209_0169 2 None None None 163839468 Pathogen - hypothetical protein RSal33209_0712 1 None None None 163839715 Common - polyphosphate kinase RSal33209_0965 162 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 163840279 Common - predicted hydrolase (HAD superfamily) RSal33209_1534 4 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 163841598 Common - hypothetical protein RSal33209_2865 11 None None None 163840863 Common - peptidase family T4 RSal33209_2122 50 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841538 Common - hypothetical ATPase RSal33209_2804 7 None None None 163841567 Common - lactate 2-monooxygenase RSal33209_2834 26 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 163838968 Pathogen - Na+/solute symporter RSal33209_0203 1 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 163840438 Common - hypothetical protein RSal33209_1693 37 COG0439 AccC, Biotin carboxylase Lipid metabolism 163840734 Common - peptidyl-prolyl cis-trans isomerase RSal33209_1992 147 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 163839020 Pathogen - hypothetical protein RSal33209_0255 1 None None None 163840125 Common - cysteine desulfurase RSal33209_1379 237 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 163841305 Common - hypothetical protein RSal33209_2571 42 COG2267 PldB, Lysophospholipase Lipid metabolism 163841496 Common - IS994 RSal33209_2762 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839615 Pathogen - hypothetical membrane protein RSal33209_0863 1 None None None 163841413 Pathogen - universal stress protein family, putative RSal33209_2679 1 None None None 163840281 Common - transglutaminase-like protein RSal33209_1536 75 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 163839638 Common - arsenite permease RSal33209_0886 71 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 163838897 Pathogen - hypothetical protein RSal33209_0132 1 None None None 163840409 Common dppB.4 dipeptide transport system permease protein RSal33209_1664 4 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163841324 Common - cytidylate kinase RSal33209_2590 206 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 163840650 Common grpE co-chaperone RSal33209_1908 223 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 163841297 Common - IS994 RSal33209_2562 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839896 Pathogen - hypothetical protein RSal33209_1149 1 None None None 163839463 Common - branched-chain amino acid permease RSal33209_0707 17 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 163841577 Common - carboxypeptidase S1 RSal33209_2844 36 COG2939 COG2939, Carboxypeptidase C (cathepsin A) Amino acid transport and metabolism 163842211 Common - IS994 RSal33209_3493 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841121 Common dpiA transcriptional regulatory protein RSal33209_2386 214 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 163840352 Common - IS994 RSal33209_1607 39 None None None 163840499 Common - GMP synthase (glutamine-hydrolyzing) RSal33209_1755 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 163841688 Common - acetyl-CoA carboxylase biotin-containing subunit RSal33209_2957 237 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 163839914 Common - oligopeptide transporter, ATPase protein RSal33209_1167 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 163842007 Common - hypothetical protein RSal33209_3284 34 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 163840904 Common - LSU ribosomal protein L23P RSal33209_2163 215 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 163839452 Common - molybdopterin converting factor, subunit 2 RSal33209_0696 152 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 163840320 Common - anthranilate phosphoribosyltransferase RSal33209_1575 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 163841235 Common ftsI cell division protein RSal33209_2500 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 163840014 Pathogen - hypothetical protein RSal33209_1268 1 None None None 163841806 Common - hypothetical membrane spanning protein RSal33209_3076 29 COG2259 COG2259, Predicted membrane protein Function unknown 163838979 Common - Mg(2+) transport ATPase, P-type RSal33209_0214 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 163841480 Common - secretory serine protease RSal33209_2746 14 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 163839123 Common - sugar kinase RSal33209_0359 43 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 163841890 Common - sugar transport system permease protein RSal33209_3163 82 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 163841220 Common - lipoprotein signal peptidase RSal33209_2485 40 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 163842243 Common - SSU ribosomal protein S18P RSal33209_3525 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 163839075 Common - organic hydroperoxide resistance protein RSal33209_0310 85 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 163840617 Pathogen - hypothetical protein RSal33209_1875 1 None None None 163840985 Common - protoheme IX farnesyltransferase RSal33209_2245 181 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 163839676 Common - lysin RSal33209_0924 5 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 163841546 Common - hypothetical protein RSal33209_2813 26 COG3537 COG3537, Putative alpha-1,2-mannosidase Carbohydrate transport and metabolism 163841897 Common - putative pit accessory protein RSal33209_3171 27 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 163840833 Common - thioredoxin peroxidase RSal33209_2092 204 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 163840494 Common - UTP--glucose-1-phosphate uridylyltransferase RSal33209_1750 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 163842088 Pathogen - hypothetical protein RSal33209_3369 1 None None None 163841929 Common - multidrug transporter RSal33209_3203 4 None None None 163838776 Common - DNA gyrase subunit A RSal33209_0007 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 163841431 Common - 1,2-alpha-L-fucosidase RSal33209_2697 5 None None None 163841522 Common - transcriptional regulator, DeoR family RSal33209_2788 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 163838972 Common - beta-lactamase RSal33209_0207 53 COG2367 PenP, Beta-lactamase class A Defense mechanisms 163840947 Common phaF potassium/proton antiporter RSal33209_2206 2 None None None 163842205 Common - hypothetical protein RSal33209_3487 8 COG2343 COG2343, Uncharacterized protein conserved in bacteria Function unknown 163840242 Common - phenol 2-monooxygenase small subunit RSal33209_1497 70 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 163839374 Common - IS994 RSal33209_0617 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839803 Common - two-component sensor kinase RSal33209_1056 25 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163841298 Pathogen - hypothetical protein RSal33209_2563 1 None None None 163841851 Common - sorbitol dehydrogenase RSal33209_3124 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 163840237 Common - aquaporin RSal33209_1492 50 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 163839480 Common recX.2 regulatory protein RSal33209_0724 2 None None None 163840749 Pathogen - acetyltransferase, GNAT family RSal33209_2007 1 COG0456 RimI, Acetyltransferases General function prediction only 163841330 Common - chitinase RSal33209_2596 13 None None None 163841780 Common - mycothiol-conjugate amidase RSal33209_3050 23 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 163841094 Common - hypothetical protein RSal33209_2355 2 None None None 163840484 Common - putative permease protein RSal33209_1739 2 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 163839092 Common - adenosine deaminase RSal33209_0327 99 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 163840768 Common - ATP-dependent DNA helicase RSal33209_2026 118 COG4581 COG4581, Superfamily II RNA helicase DNA replication, recombination, and repair 163839160 Common - DNA polymerase III, delta' subunit RSal33209_0397 219 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 163841000 Common - ABC transporter ATP-binding protein RSal33209_2260 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 163842219 Common - manganese-binding protein RSal33209_3501 94 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 163840342 Common - transcriptional regulator, TetR family RSal33209_1597 17 COG1309 AcrR, Transcriptional regulator Transcription 163839412 Common - translation initiation factor IF-2 RSal33209_0656 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 163839975 Common - putative acetyltransferase RSal33209_1228 22 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 163839422 Common - IS994 RSal33209_0666 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840082 Pathogen - IS994 RSal33209_1336 1 None None None 163840562 Common - GMC family oxidoreductase RSal33209_1820 89 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 163840794 Common - serine protease C precursor RSal33209_2053 20 None None None 163840302 Pathogen - aminoglycoside phosphotransferase RSal33209_1557 1 None None None 163841163 Common - transporter, MFS superfamily RSal33209_2428 40 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 163840466 Common - glycine dehydrogenase (decarboxylating) RSal33209_1721 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 163839877 Common - 2,5-diketo-D-gluconic acid reductase RSal33209_1130 171 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 163839277 Common - ISRs2 transposase RSal33209_0518 84 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839960 Common - hypothetical protein RSal33209_1213 17 None None None 163839173 Common - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RSal33209_0410 184 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 163838990 Common - GDP-mannose:alpha-D-mannosyl-phosphatidyl-myo-inositol alpha-1,6-mannosyltransferase RSal33209_0225 179 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 163841989 Common - transcriptional regulator, TetR family RSal33209_3264 7 COG1309 AcrR, Transcriptional regulator Transcription 163842062 Common - putative acetyltransferase RSal33209_3342 8 COG3393 COG3393, Predicted acetyltransferase General function prediction only 163842173 Common - tetratricopeptide repeat domain protein RSal33209_3455 3 None None None 163839971 Common - uroporphyrinogen-III synthase RSal33209_1224 59 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 163840461 Common - isoamylase RSal33209_1716 49 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 163840714 Common - hypothetical protein RSal33209_1972 2 None None None 163840458 Common - hypothetical protein RSal33209_1713 5 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 163838862 Common - hypothetical protein RSal33209_0097 10 COG1846 MarR, Transcriptional regulators Transcription 163841066 Common - pyruvate kinase RSal33209_2327 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 163839135 Pathogen - alpha/beta superfamily RSal33209_0371 1 None None None 163839387 Common - IS994 RSal33209_0631 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163839311 Common - 3-ketoacid-CoA transferase, alpha subunit RSal33209_0553 108 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 163841021 Common - ABC transporter, transmembrane region RSal33209_2281 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 163842019 Common - hypothetical protein RSal33209_3296 2 None None None 163838771 Common - DNA polymerase III, beta chain RSal33209_0002 214 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 163841471 Common - sensory transduction protein kinase RSal33209_2737 98 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163840415 Common - dipeptide-binding protein RSal33209_1670 17 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163838928 Common - disaccharide transport system permease protein RSal33209_0163 151 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 163840137 Common - 2-oxoglutarate dehydrogenase E1 component RSal33209_1391 194 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 163840034 Common - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C RSal33209_1288 114 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 163841407 Common - coenzyme F390 synthetase RSal33209_2673 126 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 163838953 Common - IS994 RSal33209_0188 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841742 Common - hypothetical protein RSal33209_3012 2 COG2835 COG2835, Uncharacterized conserved protein Function unknown 163840800 Pathogen - hypothetical protein RSal33209_2059 1 None None None 163839318 Common - 8-amino-7-oxononanoate synthase RSal33209_0560 187 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 163841909 Common - dihydroxyacetone kinase RSal33209_3183 76 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 163839793 Common - D-3-phosphoglycerate dehydrogenase RSal33209_1046 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 163840996 Common - ABC transporter amino acid-binding protein RSal33209_2256 72 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163841695 Common - purine nucleoside phosphorylase RSal33209_2964 120 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 163838869 Common - subtilisin-like protease RSal33209_0104 2 None None None 163841933 Common - hypothetical cytosolic protein RSal33209_3207 43 COG5495 COG5495, Uncharacterized conserved protein Function unknown 163841973 Common - LSU ribosomal protein L27P RSal33209_3248 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 163839501 Common - translation initiation factor IF-3 RSal33209_0745 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 163839508 Common - glyoxalase/bleomycin resistance protein/dioxygenase superfamily RSal33209_0752 6 None None None 163840898 Common - LSU ribosomal protein L29P RSal33209_2157 117 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 163839143 Common - two component system histidine kinase RSal33209_0379 73 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 163841718 Common - ribose-phosphate pyrophosphokinase RSal33209_2987 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 163840321 Common - cytochrome c oxidase polypeptide III RSal33209_1576 156 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 163841208 Common - methionine aminopeptidase RSal33209_2473 61 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 163841389 Pathogen - hypothetical protein RSal33209_2655 1 None None None 163840697 Common - primosomal protein RSal33209_1955 199 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 163839511 Common - long-chain-fatty-acid--CoA ligase RSal33209_0755 219 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163838912 Common - putative alpha amylase RSal33209_0147 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 163839551 Common - DNA methylation and regulatory protein ADA RSal33209_0795 66 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 163841967 Common - hypothetical protein RSal33209_3242 2 None None None 163841380 Pathogen - hypothetical protein RSal33209_2646 1 None None None 163841642 Common - two-component response regulator RSal33209_2911 24 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 163841959 Common - long-chain-fatty-acid--CoA ligase RSal33209_3233 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163841772 Pathogen - hypothetical protein RSal33209_3042 1 None None None 163839827 Common - hypothetical protein RSal33209_1080 2 None None None 163841527 Common - translation initiation inhibitor RSal33209_2793 91 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 163839798 Common - methionyl-tRNA synthetase RSal33209_1051 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163839329 Common - serine protease C precursor RSal33209_0571 8 None None None 163838893 Common - hypothetical protein RSal33209_0128 12 None None None 163839437 Common - hypothetical protein RSal33209_0681 5 COG5650 COG5650, Predicted integral membrane protein Function unknown 163841342 Common - Sirohydrochlorin ferrochelatase RSal33209_2608 2 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 163838845 Common - hypothetical protein RSal33209_0080 3 None None None 163840686 Common - amino acid permease RSal33209_1944 18 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 163839967 Common - protoporphyrinogen oxidase RSal33209_1220 56 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 163841503 Common - hypothetical protein RSal33209_2769 13 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 163839923 Common - citrate synthase RSal33209_1176 194 COG0372 GltA, Citrate synthase Energy production and conversion 163841201 Common - IS994 RSal33209_2466 42 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 163841666 Common - asparagine synthetase (glutamine-hydrolyzing) RSal33209_2935 136 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 163842132 Common - 6-phospho-beta-glucosidase RSal33209_3413 53 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 163841216 Common - DNA polymerase III alpha subunit RSal33209_2481 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 163841753 Common - phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit RSal33209_3023 198 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 163838812 Common - transcriptional regulator, LysR family RSal33209_0046 180 COG0583 LysR, Transcriptional regulator Transcription 163841462 Common - endonuclease IV RSal33209_2728 20 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 163839792 Common - ketol-acid reductoisomerase RSal33209_1045 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 163841274 Common - heterocyst glycolipid synthase RSal33209_2539 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 163839116 Common - succinyl-CoA synthetase beta chain RSal33209_0352 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 163839347 Common - sorbitol-binding protein, ABC transporter RSal33209_0589 11 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 163841318 Common - acid proteinase, putative RSal33209_2584 2 None None None 163839398 Common - acetyltransferase RSal33209_0642 14 COG3393 COG3393, Predicted acetyltransferase General function prediction only 163839036 Common - glycine/serine hydroxymethyltransferase RSal33209_0271 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 163841863 Common - Co/Zn/Cd cation transporter RSal33209_3136 4 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 163840406 Pathogen dppC.2 dipeptide transport system permease protein RSal33209_1661 1 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 163840298 Common - nucleoside-diphosphate-sugar epimerase RSal33209_1553 10 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 163840854 Common - IS994 RSal33209_2113 36 None None None 163840229 Common - DNA polymerase III alpha subunit RSal33209_1484 122 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 163841458 Common acuC acetoin utilization protein RSal33209_2724 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 163839384 Pathogen - hypothetical membrane protein RSal33209_0628 2 None None None 163841570 Common - NADH-dependent dehydrogenase RSal33209_2837 101 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163840349 Common - phosphoglycerate mutase family protein, putative RSal33209_1604 19 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 163840091 Common - lysozyme M1 RSal33209_1345 6 None None None 163840268 Common - transcriptional regulator, LysR family RSal33209_1523 191 COG0583 LysR, Transcriptional regulator Transcription 163839300 Pathogen - hypothetical protein RSal33209_0542 1 None None None 163840169 Pathogen - transporter, MFS superfamily RSal33209_1424 2 None None None 163840535 Common - transcriptional regulator, IclR family RSal33209_1791 101 COG1414 IclR, Transcriptional regulator Transcription 163839902 Common - hypothetical protein RSal33209_1155 2 None None None 163839023 Common - ABC transporter permease protein RSal33209_0258 3 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 163842144 Common - thioredoxin reductase RSal33209_3425 26 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 163842153 Common - long-chain-fatty-acid--CoA ligase RSal33209_3435 211 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 163839015 Common livM branched-chain amino acid transport system permease protein RSal33209_0250 143 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 163841311 Common - alkylsulfate dioxygenase (2-oxoglutarate-dependent) RSal33209_2577 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 163839322 Common - hypothetical protein RSal33209_0564 6 None None None 163840160 Common - transcriptional regulator, HTH domain RSal33209_1414 70 COG2378 COG2378, Predicted transcriptional regulator Transcription 163840628 Pathogen - hypothetical protein RSal33209_1886 1 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 163839848 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III RSal33209_1101 224 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 163838965 Common - hypothetical protein RSal33209_0200 20 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 163841451 Common - hypothetical transcriptional regulatory protein RSal33209_2717 16 None None None 163840757 Common - gluconate kinase RSal33209_2015 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 163841086 Common - riboflavin synthase, alpha chain RSal33209_2347 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 163839475 Common - transcriptional regulator RSal33209_0719 32 COG1395 COG1395, Predicted transcriptional regulator Transcription 163840053 Common - dipeptide-binding protein RSal33209_1307 152 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 163840999 Common - ABC transporter amino acid-binding protein RSal33209_2259 38 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 163841649 Common - hypothetical membrane spanning protein RSal33209_2918 30 COG5438 COG5438, Predicted multitransmembrane protein Function unknown 163841040 Common - hypothetical membrane protein RSal33209_2300 61 COG0390 COG0390, ABC-type uncharacterized transport system, permease component General function prediction only 163841223 Common - hypothetical cytosolic protein RSal33209_2488 50 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 163841779 Common - thymidylate kinase RSal33209_3049 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 163839700 Common - IS994 RSal33209_0950 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840557 Pathogen - opine oxidase RSal33209_1815 1 None None None 163841870 Common - PTS system, fructose-specific IIABC component RSal33209_3143 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 163839307 Common - transcriptional regulator, TetR family RSal33209_0549 88 COG1309 AcrR, Transcriptional regulator Transcription 163839356 Common - short-chain dehydrogenase RSal33209_0598 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 163840052 Common - transcriptional regulator RSal33209_1306 28 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 163840690 Common - glycerol kinase RSal33209_1948 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 163839941 Common - ATP-binding protein involved in chromosome partitioning RSal33209_1194 233 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 163841426 Common - antibiotic resistance protein RSal33209_2692 233 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 163839442 Common - glycosyl transferase family 2 RSal33209_0686 24 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 163841634 Pathogen - hypothetical protein RSal33209_2902 2 None None None 163839064 Common - hypothetical protein RSal33209_0299 13 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 163839708 Common - thymidylate synthase RSal33209_0958 144 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 163839214 Common - MFS superfamily transporter RSal33209_0455 55 None None None 163840489 Common - hypothetical protein RSal33209_1744 5 None None None 163841025 Common - Zn-dependent hydrolase RSal33209_2285 201 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 163841948 Common - D-alanyl-meso-diaminopimelate endopeptidase RSal33209_3222 83 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 163838839 Common - ATP-dependent helicase RSal33209_0074 173 COG1201 Lhr, Lhr-like helicases General function prediction only 163840383 Common - ribosome-associated factor Y RSal33209_1638 92 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 163841130 Pathogen - hypothetical protein RSal33209_2395 1 None None None 163840396 Common clpP.2 ATP-dependent endopeptidase clp proteolytic subunit RSal33209_1651 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 163840065 Common - o-succinylbenzoate synthase RSal33209_1319 99 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 163839721 Common - glycine cleavage system T protein (aminomethyltransferase) RSal33209_0971 101 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 163840842 Common - hypothetical protein RSal33209_2101 29 COG3346 COG3346, Uncharacterized conserved protein Function unknown 163838808 Common - hypothetical membrane protein RSal33209_0042 6 None None None 163839365 Common - monoxygenase RSal33209_0608 32 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 163839257 Common - metal-dependent transcriptional repressor RSal33209_0498 68 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 163839549 Common - hypothetical protein RSal33209_0793 2 None None None 163839408 Pathogen - hypothetical protein RSal33209_0652 1 None None None 163841795 Common - ISRs2 transposase RSal33209_3065 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 163840031 Common cspR RNA methyltransferase RSal33209_1285 160 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 163840043 Common - NAD-dependent oxidoreductase RSal33209_1297 100 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 163840829 Common - aminopeptidase N RSal33209_2088 22 None None None 163841339 Common - aminobutyraldehyde dehydrogenase RSal33209_2605 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 163842046 Common - serine acetyltransferase RSal33209_3325 203 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 163839330 Common - hydrolase, alpha/beta fold family RSal33209_0572 26 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 163840702 Common - integration host factor RSal33209_1960 17 None None None 163840213 Common - nicotinate phosphoribosyltransferase RSal33209_1468 109 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 163841515 Common - transcriptional regulator, ROK family RSal33209_2781 167 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 163840726 Pathogen - hypothetical protein RSal33209_1984 1 None None None 163839743 Common - LSU ribosomal protein L10P RSal33209_0994 193 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 163840891 Common - SSU ribosomal protein S8P RSal33209_2150 245 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 163840884 Common - adenylate kinase RSal33209_2143 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 163839558 Common - tyrosyl-tRNA synthetase RSal33209_0802 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 163840634 Common - hypothetical protein RSal33209_1892 2 None None None 163841654 Common - short-chain fatty acids transporter RSal33209_2923 38 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism