Sorangium cellulosum 'So ce 56', complete genome NC_010162 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 162450366 Nonpathogen - hypothetical protein sce2094 9 COG3500 COG3500, Phage protein D General function prediction only 162455381 Common - hypothetical protein sce7099 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449477 Common - Protein kinase sce1207 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448612 Common argB2 hypothetical protein sce0342 216 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 162450555 Nonpathogen - transposase sce2283 1 None None None 162450015 Common - hypothetical protein sce1744 183 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162456207 Common - glutaredoxin sce7924 119 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 162456503 Common - hypothetical protein sce8220 4 COG3882 FkbH, Predicted enzyme involved in methoxymalonyl-ACP biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162455232 Common pp2c13 Phosphoprotein phosphatase sce6950 133 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162455909 Common - Protein kinase sce7627 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452165 Common ompA1 outer membrane protein sce3892 156 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162455848 Common - ECF-family RNA polymerase sigma factor sce7566 169 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457650 Common atpF2 H(+)-transporting two-sector ATPase sce9364 47 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 162450830 Nonpathogen - hypothetical protein sce2558 1 None None None 162453740 Nonpathogen - hypothetical protein sce5464 1 None None None 162451701 Common dut dUTP diphosphatase sce3429 178 COG0756 Dut, dUTPase Nucleotide transport and metabolism 162451296 Common ndh2 NADH dehydrogenase sce3024 198 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 162454260 Nonpathogen - hypothetical protein sce5983 1 None None None 162454460 Nonpathogen - hypothetical protein sce6180 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162452613 Nonpathogen - hypothetical protein sce4337 4 None None None 162455808 Common - hypothetical protein sce7526 19 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 162456662 Common - hypothetical protein sce8379 7 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162451987 Common - hypothetical protein sce3714 26 COG3897 COG3897, Predicted methyltransferase General function prediction only 162454755 Common - methyltransferase sce6473 96 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 162455239 Nonpathogen - putative integral membrane protein sce6957 1 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 162450892 Common huyA2 N-methylhydantoinase A, beta-subunit (ATP-hydrolyzing) sce2620 114 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162452431 Nonpathogen - putative secreted protein sce4155 6 None None None 162450398 Common - hypothetical protein sce2126 9 None None None 162449970 Common rnc ribonuclease III sce1699 216 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 162450863 Common - Putative aminotransferase sce2591 228 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 162457116 Common - putative ThiJ/PfpI family protein sce8831 131 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162448803 Common - putative secreted trypsin-like serine protease sce0533 13 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 162452618 Nonpathogen - keratin associated protein 5-1 sce4342 3 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 162457101 Nonpathogen - hypothetical protein sce8816 1 None None None 162455624 Nonpathogen - hypothetical protein sce7342 1 None None None 162456110 Common - conserved carbohydrate-binding protein, Rhs family sce7826 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162449675 Common - transcriptional regulator, ArsR family sce1404 97 COG1777 COG1777, Predicted transcriptional regulators Transcription 162456802 Nonpathogen - hypothetical protein sce8519 1 None None None 162451190 Common - FHA domain protein sce2918 5 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162453786 Common - Predicted hydrolase (HAD superfamily) sce5510 171 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 162448504 Common cbiH Precorrin-3B C(17)-methyltransferase sce0234 133 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 162449181 Nonpathogen - hypothetical protein sce0911 6 COG4341 COG4341, Predicted HD phosphohydrolase General function prediction only 162453007 Nonpathogen - hypothetical protein sce4731 10 None None None 162454776 Common - acetyltransferase, GNAT family sce6494 7 COG0456 RimI, Acetyltransferases General function prediction only 162450574 Common - hypothetical protein sce2302 7 COG4633 COG4633, Uncharacterized protein conserved in bacteria Function unknown 162451597 Common - hypothetical protein sce3325 10 None None None 162452447 Nonpathogen - hypothetical protein sce4171 1 None None None 162455994 Common - hypothetical protein sce7712 13 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162450763 Common dak1 Glycerone kinase, DAK1 domain sce2491 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 162452544 Nonpathogen - hypothetical protein sce4268 1 None None None 162455575 Common - hypothetical protein sce7293 69 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 162448660 Common hflX1 putative GTP-binding protein sce0390 210 COG2262 HflX, GTPases General function prediction only 162457423 Nonpathogen - hypothetical protein sce9137 1 None None None 162452908 Common - putative carbonate hydratase sce4632 142 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 162452607 Common - Protein kinase sce4331 139 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456771 Nonpathogen - hypothetical protein sce8488 1 None None None 162448380 Common - hypothetical protein sce0110 29 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162448365 Common - hypothetical protein sce0095 51 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 162449977 Common - outer membrane protein sce1706 142 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162448328 Nonpathogen - hypothetical protein sce0059 1 None None None 162449702 Common - hypothetical protein sce1431 10 None None None 162455241 Common - alkyl hydroperoxide reductase, C subunit sce6959 217 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162452135 Nonpathogen - hypothetical protein sce3862 1 None None None 162455138 Common ddlB D-alanine-D-alanine ligase B sce6856 214 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 162448964 Common - hydrolase, alpha/beta fold family protein sce0694 85 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162452282 Nonpathogen - putative secreted protein sce4009 1 None None None 162452438 Nonpathogen - hypothetical protein sce4162 5 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 162449120 Common - Protein kinase sce0850 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450981 Nonpathogen - hypothetical protein sce2709 1 None None None 162451849 Common - hypothetical protein sce3576 190 COG0782 GreA, Transcription elongation factor Transcription 162453408 Nonpathogen - hypothetical protein sce5131 1 None None None 162449031 Nonpathogen - hypothetical protein sce0760 1 None None None 162450096 Common panE2 2-dehydropantoate 2-reductase sce1825 63 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 162456347 Nonpathogen - hypothetical protein sce8064 2 None None None 162456439 Common - hypothetical protein sce8156 83 COG1872 COG1872, Uncharacterized conserved protein Function unknown 162456647 Nonpathogen - hypothetical protein sce8364 1 None None None 162456370 Common glcP permease of the major facilitator superfamily,probable glucose transporter sce8087 71 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162452395 Nonpathogen - hypothetical protein sce4119 1 None None None 162453399 Nonpathogen - hypothetical protein sce5123 2 None None None 162457163 Common - putative transcription regulator protein, deoR-family sce8878 75 COG2378 COG2378, Predicted transcriptional regulator Transcription 162448455 Common - hypothetical protein sce0185 23 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162452665 Common - hypothetical protein sce4389 119 COG2127 COG2127, Uncharacterized conserved protein Function unknown 162449830 Common - putative secreted protein sce1559 13 None None None 162450377 Common - hypothetical protein sce2105 22 None None None 162451002 Common - Protein kinase sce2730 129 COG3899 COG3899, Predicted ATPase General function prediction only 162457451 Nonpathogen - hypothetical protein sce9166 19 None None None 162450837 Nonpathogen - hypothetical protein sce2565 1 None None None 162449049 Nonpathogen - hypothetical protein sce0779 1 None None None 162455109 Nonpathogen - hypothetical protein sce6828 2 None None None 162448752 Nonpathogen - hypothetical protein sce0482 1 COG3899 COG3899, Predicted ATPase General function prediction only 162450008 Common cis1 hypothetical protein sce1738 190 COG0372 GltA, Citrate synthase Energy production and conversion 162455264 Common - conserved carbohydrate-binding protein, Rhs family sce6982 42 COG5373 COG5373, Predicted membrane protein Function unknown 162455711 Common - putative secreted protein sce7429 34 None None None 162450464 Nonpathogen - hypothetical protein sce2192 1 COG5426 COG5426, Uncharacterized membrane protein Function unknown 162456657 Nonpathogen - hypothetical protein sce8374 1 None None None 162454305 Nonpathogen - putative secreted protein sce6028 1 None None None 162455882 Common - ATP-dependent DNA helicase. sce7600 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 162453517 Nonpathogen - hypothetical protein sce5241 6 COG4371 COG4371, Predicted membrane protein Function unknown 162449111 Common tufA2 Elongation factor (EF) sce0841 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 162452309 Common nrtC1 nitrate/nitrite ABC transporter ATP-binding protein sce4035 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162455225 Nonpathogen - hypothetical protein sce6943 1 None None None 162457264 Common - anti-anti sigma factor protein sce8979 56 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162448363 Nonpathogen - hypothetical protein sce0093 1 None None None 162450858 Common cumB putative zinc-binding hydrolase sce2586 205 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 162450778 Common - hypothetical protein sce2506 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450017 Common pheA1 hypothetical protein sce1746 210 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 162455474 Nonpathogen - hypothetical protein sce7192 1 COG5180 PBP1, Protein interacting with poly(A)-binding protein RNA processing and modification 162448765 Common - hypothetical protein sce0495 4 None None None 162449837 Common - hypothetical protein sce1566 6 None None None 162453729 Common - ECF-family RNA polymerase sigma factor sce5453 120 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452944 Nonpathogen - hypothetical protein sce4668 1 None None None 162450506 Common yhjM Cellulase sce2234 20 None None None 162457390 Common - hypothetical protein sce9105 17 None None None 162449835 Nonpathogen - hypothetical protein sce1564 1 None None None 162450802 Common - acyl-CoA synthetase sce2530 221 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162454327 Nonpathogen - hypothetical protein sce6050 1 None None None 162450889 Common - putative LacI-family transcriptional regulator sce2617 166 COG1609 PurR, Transcriptional regulators Transcription 162453299 Common - hypothetical protein sce5023 8 None None None 162456775 Common - putative anaerobic reductase component sce8492 158 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 162450587 Common - hypothetical protein sce2315 12 COG3899 COG3899, Predicted ATPase General function prediction only 162454895 Common - transposase sce6613 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162456613 Nonpathogen lepB3 hypothetical protein sce8330 1 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 162452203 Nonpathogen - hypothetical protein sce3930 1 None None None 162450280 Nonpathogen - hypothetical protein sce2008 1 None None None 162452991 Nonpathogen - hypothetical protein sce4715 1 None None None 162454886 Nonpathogen - putative secreted protein sce6604 1 None None None 162452300 Common - sensor histidine kinase/response regulator hybrid sce4026 216 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453863 Nonpathogen - hypothetical protein sce5587 4 None None None 162449238 Common galM2 Aldose 1-epimerase sce0968 88 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 162454297 Nonpathogen - hypothetical protein sce6020 1 None None None 162448389 Common - putative cell surface protein sce0119 42 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162450897 Common ssb ssDNA-binding protein sce2625 209 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 162449311 Common surA peptidyl-prolyl cis-trans isomerase SurA sce1041 108 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162451211 Common moaA3 hypothetical protein sce2939 194 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 162450427 Nonpathogen - hypothetical protein sce2155 1 None None None 162454082 Common - Protein kinase sce5806 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449131 Common - putative peptidyl-prolyl cis-trans isomerase sce0861 74 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 162450110 Nonpathogen - hypothetical protein sce1840 1 None None None 162454567 Nonpathogen - hypothetical protein sce6287 1 None None None 162452901 Common - hypothetical protein sce4625 16 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 162455952 Common - putative phosphoesterase/phosphatase sce7670 99 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162453071 Nonpathogen prmA1 ribosomal protein L11 methyltransferase sce4795 3 COG2263 COG2263, Predicted RNA methylase Translation, ribosomal structure and biogenesis 162457604 Common - no hits sce9318 15 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 162450729 Common nadD Nicotinate-nucleotide adenylyltransferase sce2457 174 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 162448647 Common - hypothetical metallo-beta-lactamase family protein sce0377 156 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 162452857 Common hypE hydrogenase expression/formation protein HypE sce4581 160 COG0309 HypE, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 162449076 Common - hypothetical protein sce0806 9 COG4922 COG4922, Uncharacterized protein conserved in bacteria Function unknown 162450958 Common - Hypothetical WD-repeat protein sce2686 114 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162452386 Nonpathogen - hypothetical protein sce4110 1 None None None 162454118 Common - Protein kinase sce5842 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453720 Common - Protein kinase sce5444 229 COG3899 COG3899, Predicted ATPase General function prediction only 162448915 Common - hypothetical protein sce0645 9 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 162450420 Nonpathogen - hypothetical protein sce2148 1 None None None 162449991 Common - transcriptional regulator, TetR family sce1720 25 COG1309 AcrR, Transcriptional regulator Transcription 162453669 Nonpathogen - hypothetical protein sce5393 1 None None None 162455464 Common - hypothetical protein sce7182 131 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 162456200 Common - putative penicillin-insensitive murein endopeptidase sce7917 25 COG3770 MepA, Murein endopeptidase Cell envelope biogenesis, outer membrane 162449666 Common - hypothetical protein sce1395 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 162450311 Common - Glutamyl endopeptidase sce2039 26 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162457397 Nonpathogen - hypothetical protein sce9112 1 None None None 162454283 Common - sterol desaturase-related protein sce6006 73 COG3000 ERG3, Sterol desaturase Lipid metabolism 162455641 Common - amino acid transporter sce7359 43 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 162456606 Common - hypothetical protein sce8323 94 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162455350 Nonpathogen - hypothetical protein sce7068 1 None None None 162449034 Common - put. Sugar binding ABC transporter protein sce0764 118 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162454464 Common pilQ type 4 fimbrial biogenesis protein PilQ sce6184 142 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 162450204 Common mnhE Na+/H+ antiporter sce1932 70 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 162456361 Common - putative integral membrane protein sce8078 94 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162455651 Common - Protein kinase sce7369 137 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453639 Common - hypothetical protein sce5363 19 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162455522 Common - fumarylacetoacetate hydrolase family protein sce7240 158 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 162452842 Common - amino acid transporter sce4566 188 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 162454607 Common - hypothetical protein sce6328 29 None None None 162449325 Nonpathogen - hypothetical protein sce1055 1 None None None 162452120 Common ilvA putative serine/threonine dehydratase sce3847 213 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 162451363 Common rpsD1 30S ribosomal protein S4 sce3091 248 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 162450082 Nonpathogen - hypothetical protein sce1811 1 None None None 162452789 Nonpathogen - hypothetical protein sce4513 1 None None None 162450210 Common - two-component response regulator sce1938 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162456991 Common - hybrid sensor histidine kinase/response regulator sce8707 71 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162452683 Common - hypothetical protein sce4407 16 COG4102 COG4102, Uncharacterized protein conserved in bacteria Function unknown 162455745 Nonpathogen - hypothetical protein sce7463 1 None None None 162449460 Common - two-component response regulator sce1190 213 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450824 Nonpathogen - hypothetical protein sce2552 1 None None None 162451305 Common - hypothetical protein sce3033 84 COG1446 COG1446, Asparaginase Amino acid transport and metabolism 162453378 Nonpathogen - hypothetical protein sce5102 1 None None None 162454811 Common - hypothetical protein sce6529 6 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 162455386 Common - bacterioferritin comigratory protein sce7104 203 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162452426 Common - putative hydrolase of unknown specificity sce4150 163 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162454423 Nonpathogen - hypothetical protein sce6143 1 None None None 162456312 Common glyS glycyl-tRNA synthetase beta chain sce8029 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 162457300 Common comEB dCMP deaminase sce9015 101 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 162451997 Common gyrA DNA gyrase subunit A sce3724 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 162448496 Common - hypothetical protein sce0226 31 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162456986 Nonpathogen - putative secreted protein sce8702 3 None None None 162453411 Common - Oxidoreductase FAD-binding domain protein sce5135 152 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 162457246 Common - putative oxidoreductase sce8961 76 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162450546 Common - transcriptional regulator, LysR family sce2273 152 COG0583 LysR, Transcriptional regulator Transcription 162456627 Nonpathogen - hypothetical protein sce8344 2 None None None 162453318 Common dhbC hypothetical protein sce5042 221 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162455699 Common leuS hypothetical protein sce7417 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162457353 Nonpathogen - hypothetical protein sce9068 1 None None None 162455378 Nonpathogen - hypothetical protein sce7096 1 None None None 162452600 Nonpathogen - hypothetical protein sce4323 1 None None None 162456737 Common - Putative NAD(P)H dehydrogenase sce8455 70 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 162448619 Common - hypothetical protein sce0349 32 COG3287 COG3287, Uncharacterized conserved protein Function unknown 162448669 Nonpathogen - hypothetical protein sce0399 2 None None None 162449168 Common - Hydrolase sce0898 74 COG2267 PldB, Lysophospholipase Lipid metabolism 162450209 Nonpathogen - hypothetical protein sce1937 1 None None None 162453386 Common - Cardiolipin synthetase sce5110 138 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162451974 Common pyrF putative Orotidine 5'-phosphate decarboxylase sce3701 168 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 162456206 Common - ATPase with chaperone activity, two ATP-binding domains sce7923 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162449255 Common - predicted exonuclease sce0985 16 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 162450665 Common - hypothetical protein sce2393 98 COG1720 COG1720, Uncharacterized conserved protein Function unknown 162451313 Nonpathogen - putative secreted protein sce3041 1 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162451949 Common proA hypothetical protein sce3676 191 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 162448934 Common uvrB excinuclease ABC, B subunit sce0664 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 162455980 Common eno Phosphopyruvate hydratase sce7698 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 162456491 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase sce8208 13 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162456730 Nonpathogen - hypothetical protein sce8447 15 COG4880 COG4880, Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats General function prediction only 162454364 Common rpoE sigma24 homolog sce6087 5 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451825 Common - putative simple sugar transport system permease protein sce3552 105 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 162451846 Nonpathogen - PGRS family protein sce3573 1 None None None 162453061 Common - probable secreted protein sce4785 34 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 162449386 Common yahK alcohol dehydrogenase sce1116 183 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 162448332 Common - putative transcriptional regulator sce0063 173 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162456106 Common murB UDP-N-acetylmuramate dehydrogenase sce7823 184 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 162448656 Common - hypothetical protein sce0386 18 COG2229 COG2229, Predicted GTPase General function prediction only 162456871 Common - putative UDP-glucose 4-epimerase. sce8588 69 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455685 Common - peptidase sce7403 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 162452509 Common - hypothetical protein sce4233 4 COG4637 COG4637, Predicted ATPase General function prediction only 162450711 Common - hypothetical protein sce2439 5 None None None 162455208 Common - hypothetical protein sce6926 6 COG5373 COG5373, Predicted membrane protein Function unknown 162456547 Nonpathogen - hypothetical protein sce8264 2 None None None 162452650 Common - conserved hypothetical protein TIGR00486 sce4374 92 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 162455036 Common - transcriptional regulator, LysR family sce6754 141 COG0583 LysR, Transcriptional regulator Transcription 162453313 Nonpathogen - hypothetical protein sce5037 1 None None None 162450186 Common - hypothetical protein sce1915 11 COG4715 COG4715, Uncharacterized conserved protein Function unknown 162456190 Nonpathogen - hypothetical protein sce7907 1 None None None 162450462 Common - hypothetical protein sce2190 37 COG3571 COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 162453792 Common - anti-anti sigma factor protein sce5516 71 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455200 Nonpathogen - putative secreted protein sce6918 1 None None None 162451966 Common - putative transport protein sce3693 204 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 162448339 Common - outer membrane porin precursor sce0070 171 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452752 Nonpathogen - hypothetical protein sce4476 1 COG5373 COG5373, Predicted membrane protein Function unknown 162454996 Common - hypothetical protein sce6714 18 COG1306 COG1306, Uncharacterized conserved protein Function unknown 162451443 Nonpathogen - putative acyltransferase sce3171 1 None None None 162452041 Common proS hypothetical protein sce3768 100 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162453304 Nonpathogen - hypothetical protein sce5028 1 None None None 162452805 Nonpathogen - hypothetical protein sce4529 1 None None None 162451668 Common - IstB-like ATP-binding protein sce3396 79 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162455620 Common - hypothetical protein sce7338 9 None None None 162448430 Nonpathogen - hypothetical protein sce0160 1 None None None 162456788 Nonpathogen - hypothetical protein sce8505 1 None None None 162452154 Common mxcF Isochorismatase sce3881 75 COG1535 EntB, Isochorismate hydrolase Secondary metabolites biosynthesis, transport, and catabolism 162454694 Common - Protein kinase sce6414 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453545 Common - hypothetical protein sce5269 207 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 162450719 Common - putative transcriptional regulator sce2447 41 COG2378 COG2378, Predicted transcriptional regulator Transcription 162453324 Common - probable oxidoreductase sce5048 197 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162456808 Nonpathogen - hypothetical protein sce8525 1 None None None 162457488 Common - hypothetical protein sce9202 115 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 162457558 Nonpathogen - hypothetical protein sce9272 1 None None None 162456271 Nonpathogen - hypothetical protein sce7988 1 None None None 162457588 Nonpathogen - hypothetical protein sce9302 13 COG4911 COG4911, Uncharacterized conserved protein Function unknown 162451643 Common - hypothetical protein sce3371 46 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162453775 Nonpathogen - hypothetical protein sce5499 6 None None None 162456719 Common - hypothetical protein sce8436 9 None None None 162454103 Common - Protein kinase sce5827 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450749 Common malQ3 4-alpha-glucanotransferase sce2477 33 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 162451914 Common - ECF-family RNA polymerase sigma factor sce3641 41 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456405 Nonpathogen - putative UspA, Universal stress protein family sce8122 4 None None None 162449952 Nonpathogen - hypothetical protein sce1680 2 COG1407 COG1407, Predicted ICC-like phosphoesterases General function prediction only 162450403 Common - hypothetical protein sce2131 6 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162454353 Common - putative sugar nucleotide epimerase sce6076 135 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 162452237 Common - hypothetical protein sce3964 12 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 162448358 Common guaB1 IMP dehydrogenase sce0088 234 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 162454962 Common - nucleotide sugar aminotransferase sce6680 189 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 162451102 Nonpathogen - hypothetical protein sce2830 1 None None None 162449646 Common - predicted GTPase sce1375 90 COG1161 COG1161, Predicted GTPases General function prediction only 162449710 Common - permease of the major facilitator superfamily sce1439 174 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162456226 Common secY preprotein translocase SecY subunit sce7943 220 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 162456432 Nonpathogen - hypothetical protein sce8149 1 None None None 162448536 Common - hypothetical protein sce0266 31 COG1203 COG1203, Predicted helicases General function prediction only 162455648 Nonpathogen - hypothetical protein sce7366 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162453758 Nonpathogen - hypothetical protein sce5482 1 None None None 162448601 Common - hypothetical protein sce0331 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 162448859 Common - two-component hybrid sensor and regulator sce0589 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162452809 Nonpathogen - hypothetical protein sce4533 3 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162456928 Nonpathogen - hypothetical protein sce8645 1 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 162452979 Nonpathogen - hypothetical protein sce4703 1 None None None 162450003 Nonpathogen - hypothetical protein sce1732 1 None None None 162450636 Nonpathogen - hypothetical protein sce2364 1 None None None 162451779 Nonpathogen - hypothetical protein sce3506 1 COG1498 SIK1, Protein implicated in ribosomal biogenesis, Nop56p homolog Translation, ribosomal structure and biogenesis 162449735 Nonpathogen - hypothetical protein sce1464 1 None None None 162450507 Common - Protein kinase sce2235 172 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451910 Common pssA2 phosphatidylserine synthase sce3637 150 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 162450215 Nonpathogen - hypothetical protein sce1943 1 None None None 162448894 Common - two-component hybrid sensor and regulator sce0624 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453128 Common - hypothetical protein sce4852 39 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162455726 Common - transcriptional regulatory protein, Sir2 family sce7444 145 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 162455299 Common - hypothetical protein sce7017 33 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 162456768 Nonpathogen - hypothetical protein sce8485 1 None None None 162448781 Nonpathogen - hypothetical protein sce0511 1 None None None 162450128 Nonpathogen - hypothetical protein sce1857 1 None None None 162454002 Nonpathogen - hypothetical protein sce5726 4 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162454459 Common prfC peptide chain release factor 3 sce6179 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 162456095 Common - hypothetical protein sce7813 202 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 162449417 Nonpathogen - hypothetical protein sce1147 1 None None None 162449767 Common nhaP Na+/H+ antiporter sce1496 141 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 162451558 Nonpathogen - hypothetical protein sce3286 1 None None None 162452701 Nonpathogen - hypothetical protein sce4425 1 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 162456166 Common metG2 hypothetical protein sce7883 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162451084 Common - hypothetical protein sce2812 75 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162455395 Nonpathogen - hypothetical protein sce7113 3 None None None 162450938 Common - hypothetical protein sce2666 4 None None None 162451566 Common - CBS domain containing protein sce3294 53 COG0517 COG0517, FOG: CBS domain General function prediction only 162450565 Common - hypothetical protein sce2293 60 COG2391 COG2391, Predicted transporter component General function prediction only 162453968 Nonpathogen - hypothetical protein sce5692 1 None None None 162457096 Common - transcriptional regulator, TetR family sce8811 92 COG1309 AcrR, Transcriptional regulator Transcription 162450840 Nonpathogen - hypothetical protein sce2568 1 None None None 162456761 Nonpathogen - hypothetical protein sce8478 1 None None None 162454973 Common - hypothetical protein sce6691 29 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162448510 Common purL phosphoribosylformylglycinamidine synthase,probable sce0240 231 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 162456640 Common - hypothetical protein sce8357 21 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162456637 Common - hypothetical protein sce8354 4 None None None 162448695 Common - hypothetical protein sce0425 46 COG4198 COG4198, Uncharacterized conserved protein Function unknown 162450684 Common rodA rod shape-determining protein RodA sce2412 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 162449772 Common - putative adenylate/guanylate cyclase sce1501 91 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 162454616 Common - Protein kinase sce6336 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451724 Common - dehydrogenase sce3451 221 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162452793 Common - hypothetical protein sce4517 38 COG5557 COG5557, Polysulphide reductase Energy production and conversion 162454535 Common - hypothetical protein sce6255 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 162455117 Common - hypothetical sugar oxidoreductase sce6835 32 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 162451832 Common - putative cAMP phosphodiesterase sce3559 5 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162452781 Common - hypothetical protein sce4505 7 None None None 162450603 Common pepN2 Membrane alanyl aminopeptidase sce2331 161 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 162453193 Nonpathogen - hypothetical protein sce4917 3 None None None 162452128 Common - CDP-alcohol phosphatidyltransferase family protein sce3855 76 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 162452732 Common mutT putative mutT/nudix family protein sce4456 98 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162449937 Common ftsQ cell division protein sce1666 55 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 162451035 Common - putative D-alanine--D-alanine ligase A sce2763 135 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 162452212 Nonpathogen - hypothetical protein sce3939 2 None None None 162451139 Nonpathogen - hypothetical protein sce2867 1 None None None 162449040 Common - hypothetical protein sce0770 13 COG2259 COG2259, Predicted membrane protein Function unknown 162448742 Nonpathogen - hypothetical protein sce0472 1 None None None 162453268 Nonpathogen - hypothetical protein sce4992 1 None None None 162455266 Common - RhsA protein precursor. sce6984 68 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162454903 Common - transposase (possibly truncated) sce6621 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162456105 Nonpathogen - hypothetical protein sce7822 3 None None None 162450287 Nonpathogen - putative secreted protein sce2015 1 None None None 162450130 Common - Protein kinase sce1859 226 COG3899 COG3899, Predicted ATPase General function prediction only 162453985 Common - hypothetical protein sce5709 30 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162452204 Nonpathogen - hypothetical protein sce3931 1 None None None 162452284 Nonpathogen - putative secreted protein sce4011 1 None None None 162449936 Common murC1 UDP-N-acetylmuramate-alanine ligase sce1665 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 162453717 Common - putative membrane protein / Vitamin K-dependent gamma-carboxylase sce5441 13 None None None 162455763 Common - putative secreted esterase sce7481 32 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162456998 Common - response regulator sce8714 131 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 162449404 Common modB ABC-type molybdate transporter, permease protein sce1134 115 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 162455534 Nonpathogen - hypothetical protein sce7252 2 None None None 162453368 Nonpathogen - hypothetical protein sce5092 1 None None None 162454170 Common - hypothetical protein sce5894 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 162453429 Nonpathogen - hypothetical protein sce5153 3 COG5373 COG5373, Predicted membrane protein Function unknown 162450614 Nonpathogen - hypothetical protein sce2342 2 None None None 162452495 Common nuoM1 NADH dehydrogenase (ubiquinone) sce4219 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 162454530 Common pulF hypothetical protein sce6250 146 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 162448869 Common bcpA Carboxyvinyl-carboxyphosphonate phosphorylmutase sce0599 135 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 162454999 Common - ABC transporter, ATP-binding protein sce6717 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162450524 Common - hypothetical protein sce2252 3 None None None 162448475 Nonpathogen - hypothetical protein sce0205 2 None None None 162455178 Common - Protein kinase sce6896 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454612 Nonpathogen - hypothetical protein sce6332 3 None None None 162449342 Common - nifU domain protein sce1072 9 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 162450703 Common - Sulfate/thiosulfate import ATP-binding protein cysA sce2431 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162454798 Common - sensory box histidine kinase sce6516 215 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162456128 Nonpathogen - hypothetical protein sce7845 10 COG2006 COG2006, Uncharacterized conserved protein Function unknown 162453166 Common - hypothetical protein sce4890 17 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456470 Common - cAMP-dependent protein kinase regulatory subunit sce8187 89 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162457322 Nonpathogen - hypothetical protein sce9037 3 None None None 162457177 Common - hypothetical protein sce8892 11 COG3652 COG3652, Predicted outer membrane protein Function unknown 162453207 Common - hypothetical protein sce4931 5 None None None 162452932 Nonpathogen - hypothetical protein sce4656 1 None None None 162448490 Common - Protein kinase sce0220 123 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451516 Nonpathogen - hypothetical protein sce3244 2 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162454333 Common - hypothetical protein sce6056 65 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 162451717 Nonpathogen - hypothetical protein sce3445 1 None None None 162449743 Common - hypothetical protein sce1472 172 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454316 Nonpathogen - putative secreted protein sce6039 1 None None None 162451670 Common - endo-1,4-beta-glucanase sce3398 5 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162450650 Common - Glycogen debranching enzyme sce2378 153 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 162451371 Nonpathogen - hypothetical protein sce3099 1 None None None 162453115 Nonpathogen - hypothetical protein sce4839 3 None None None 162455454 Common - ABC transporter, nucleotide binding/ATPase protein sce7172 234 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 162450487 Common cheR2 Methyl-accepting chemotaxis protein O-methyltransferase sce2215 150 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162451387 Nonpathogen - hypothetical protein sce3115 1 None None None 162451660 Nonpathogen - hypothetical protein sce3388 1 None None None 162457231 Common - hypothetical protein sce8946 6 None None None 162448378 Common - hypothetical protein sce0108 49 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162452112 Nonpathogen - hypothetical protein sce3839 3 None None None 162449498 Common - probable chemotaxis transducer sce1228 164 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 162453579 Nonpathogen - hypothetical protein sce5303 2 None None None 162457564 Nonpathogen - hypothetical protein sce9278 1 None None None 162449374 Nonpathogen - PE-PGRS family protein sce1104 5 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162452565 Common - hydrolase alpha/beta fold family sce4289 91 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162450618 Nonpathogen - ADP-ribose pyrophosphatase sce2346 5 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162451541 Common nhaA1 Na+/H antiporter sce3269 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 162456555 Common - hypothetical protein sce8272 24 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162450494 Common - Sugar ABC transport system permease protein sce2222 127 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162452110 Nonpathogen - putative transcriptional regulator sce3837 3 COG4710 COG4710, Predicted DNA-binding protein with an HTH domain General function prediction only 162456583 Nonpathogen - hypothetical protein sce8300 3 None None None 162451934 Common - hypothetical protein sce3661 18 COG1359 COG1359, Uncharacterized conserved protein Function unknown 162452673 Common serC hypothetical protein sce4397 111 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 162454253 Common - Putative sugar regulator sce5976 98 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162452740 Nonpathogen - hypothetical protein sce4463 2 COG0457 NrfG, FOG: TPR repeat General function prediction only 162450722 Common - soluble lytic murein transglycosylase precursor sce2449 157 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 162449961 Common - signal transduction histidine kinase sce1690 199 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450243 Common - put. Lipoprotein sce1971 13 None None None 162457294 Nonpathogen - putative cAMP binding protein sce9009 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162457404 Common narB3 Nitrate reductase sce9118 188 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 162455619 Common - hypothetical protein sce7337 10 None None None 162457216 Common - Glucose-resistance amylase regulator sce8931 128 COG1609 PurR, Transcriptional regulators Transcription 162456869 Common - hypothetical protein sce8587 3 COG3371 COG3371, Predicted membrane protein Function unknown 162457024 Common - Sigma-54 dependent transcriptional regulator sce8739 185 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454692 Common phr hypothetical protein sce6412 25 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 162448702 Nonpathogen - hypothetical protein sce0432 1 None None None 162454582 Common - putative AraC-family transcriptional regulator sce6302 114 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162455612 Common iscU NifU-like protein sce7330 146 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 162449333 Common - put. Glycogen synthase sce1063 154 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 162451989 Common - hypothetical protein sce3717 13 COG1801 COG1801, Uncharacterized conserved protein Function unknown 162453963 Common - Putative AAA family ATPase sce5687 140 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 162454413 Nonpathogen - leucine-rich repeat family protein / extensin family protein sce6134 1 COG5373 COG5373, Predicted membrane protein Function unknown 162457645 Common yrdC2 Putative translation factor sce9359 237 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 162450536 Nonpathogen - hypothetical protein sce2264 13 None None None 162449982 Common mcrA HNH endonuclease family protein sce1711 101 COG1403 McrA, Restriction endonuclease Defense mechanisms 162449506 Common - putative secreted protein sce1236 34 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162449614 Nonpathogen - hypothetical protein sce1343 1 None None None 162449566 Nonpathogen - hypothetical protein sce1295 1 None None None 162452451 Nonpathogen - hypothetical protein sce4175 2 None None None 162452279 Common - sigma-54 dependent transcriptional regulator sce4007 189 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457365 Nonpathogen - hypothetical protein sce9080 1 None None None 162452226 Common glnA1 hypothetical protein sce3953 223 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 162454758 Nonpathogen - hypothetical protein sce6476 1 COG5028 COG5028, Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 Intracellular trafficking and secretion 162455681 Common - putative metallo-dependent hydrolase sce7399 37 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 162454378 Common - transposase sce6101 35 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162454806 Nonpathogen - hypothetical protein sce6524 1 None None None 162448730 Nonpathogen - hypothetical protein sce0460 1 None None None 162450261 Common rplC 50S ribosomal protein L3 sce1989 232 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 162454436 Nonpathogen - hypothetical protein sce6157 1 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 162454725 Nonpathogen - putative oxidoreductase sce6443 3 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 162451065 Common rkpK hypothetical protein sce2793 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 162453580 Common - hypothetical protein sce5304 71 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162451506 Common - putative helicase sce3234 71 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 162449315 Common - hypothetical protein sce1045 24 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162449097 Common - Protein kinase sce0827 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452019 Common - sugar kinase sce3746 34 COG2605 COG2605, Predicted kinase related to galactokinase and mevalonate kinase General function prediction only 162455316 Common dlhH2 Carboxymethylenebutenolidase sce7034 117 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162448828 Common - ECF-family RNA polymerase sigma factor sce0558 125 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453035 Nonpathogen - hypothetical protein sce4759 3 None None None 162449284 Nonpathogen - putative secreted protein sce1014 8 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 162449640 Nonpathogen - PE-PGRS family protein sce1369 1 COG4907 COG4907, Predicted membrane protein Function unknown 162448482 Common cobU Adenosylcobinamide-phosphate guanylyltransferase sce0212 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 162450224 Nonpathogen - hypothetical protein sce1952 2 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162454684 Nonpathogen - hypothetical protein sce6404 1 None None None 162453091 Nonpathogen - hypothetical protein sce4815 1 None None None 162449092 Common - chromosome partition protein fragment sce0822 22 COG4637 COG4637, Predicted ATPase General function prediction only 162456249 Nonpathogen - hypothetical protein sce7966 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162457520 Common efp elongation factor P sce9234 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 162456931 Common - hypothetical protein sce8648 34 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451421 Common lon3 Endopeptidase LA sce3149 209 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 162451979 Nonpathogen - hypothetical protein sce3706 1 None None None 162455442 Common - two-component hybrid sensor and regulator sce7159 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450516 Common - Hypothetical acetyltransferase yjaB . sce2244 19 COG3153 COG3153, Predicted acetyltransferase General function prediction only 162449198 Common - two-component hybrid sensor and regulator sce0929 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450998 Nonpathogen - hypothetical protein sce2726 1 None None None 162454571 Nonpathogen - probable transposase protein sce6291 5 None None None 162452252 Common - hypothetical protein sce3979 16 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 162452010 Common - Protein kinase sce3737 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456535 Common - hypothetical protein sce8252 3 None None None 162450963 Nonpathogen - hypothetical protein sce2690 1 None None None 162450480 Nonpathogen - hypothetical protein sce2208 1 None None None 162448464 Common - hypothetical protein sce0194 14 COG3652 COG3652, Predicted outer membrane protein Function unknown 162448650 Nonpathogen - hypothetical protein sce0380 1 None None None 162449125 Common - Protein kinase sce0855 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456388 Common - hypothetical protein sce8105 69 COG3000 ERG3, Sterol desaturase Lipid metabolism 162455771 Common - hypothetical protein sce7489 18 COG3868 COG3868, Uncharacterized conserved protein Function unknown 162450855 Nonpathogen ppiC hypothetical protein sce2583 1 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162453678 Common - putative NADH-dependent flavin oxidoreductase sce5402 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 162448517 Nonpathogen cbiQ cobalt ABC transporter, permease protein CbiQ sce0247 1 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 162451578 Common - put.Ribose/xylose/arabinose/galactoside ABC-type transport system permease sce3306 141 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162449695 Common purR HTH-type transcriptional repressor purR sce1424 129 COG1609 PurR, Transcriptional regulators Transcription 162456818 Nonpathogen - hypothetical protein sce8535 1 COG5373 COG5373, Predicted membrane protein Function unknown 162449723 Common - hypothetical protein sce1452 26 COG3877 COG3877, Uncharacterized protein conserved in bacteria Function unknown 162450382 Common - hypothetical protein sce2110 22 None None None 162452005 Common ilvC hypothetical protein sce3732 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 162453550 Nonpathogen - hypothetical protein sce5274 2 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 162453050 Nonpathogen - Peptidase M10A sce4774 3 None None None 162451493 Common - Protein kinase sce3221 153 COG3899 COG3899, Predicted ATPase General function prediction only 162453022 Common nth2 putative endonuclease III sce4746 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 162456790 Nonpathogen - hypothetical protein sce8507 1 None None None 162449628 Nonpathogen - hypothetical protein sce1357 1 None None None 162453147 Common - hypothetical protein sce4871 16 None None None 162452266 Common gst9 hypothetical protein sce3993 96 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162453831 Common - Phospholipase D sce5555 64 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162457039 Nonpathogen - hypothetical protein sce8754 1 None None None 162453150 Common - hypothetical protein sce4874 13 COG1106 COG1106, Predicted ATPases General function prediction only 162454434 Nonpathogen - putative secreted protein sce6154 8 None None None 162448840 Nonpathogen - hypothetical protein sce0570 1 None None None 162451021 Nonpathogen - hypothetical protein sce2749 1 None None None 162456837 Common ggt3 Gamma-glutamyltranferase sce8554 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 162451679 Nonpathogen - hypothetical protein sce3407 1 None None None 162454045 Common - probable sigma(54) modulation protein/sigma(54) modulation protein family. sce5769 82 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 162454207 Nonpathogen - hypothetical protein sce5930 1 None None None 162451856 Nonpathogen - hypothetical protein sce3583 1 None None None 162451980 Nonpathogen - hypothetical protein sce3707 18 COG1801 COG1801, Uncharacterized conserved protein Function unknown 162456175 Common - hypothetical protein sce7892 7 None None None 162455298 Common - anti-anti sigma factor protein sce7016 128 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455275 Nonpathogen - hypothetical protein sce6993 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162455041 Common - hypothetical protein sce6759 34 COG4938 COG4938, Uncharacterized conserved protein Function unknown 162454877 Nonpathogen - hypothetical protein sce6595 1 None None None 162453801 Nonpathogen - hypothetical protein sce5525 1 None None None 162456290 Nonpathogen - hypothetical protein sce8007 1 None None None 162457271 Common - hypothetical protein sce8986 71 COG2962 RarD, Predicted permeases General function prediction only 162449782 Common - putative esterase/lipase/thioesterase sce1511 5 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162456061 Common - ABC-type sugar transport systems ATPase component sce7779 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 162453838 Nonpathogen - hypothetical protein sce5562 1 None None None 162453895 Common - putative penicillin-binding protein sce5619 130 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162451335 Common - two-component hybrid sensor and regulator sce3063 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162455694 Nonpathogen - hypothetical protein sce7412 1 None None None 162448836 Nonpathogen - hypothetical protein sce0566 1 None None None 162452299 Common - two-component sensor histidine kinase sce4025 215 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162453084 Nonpathogen - hypothetical protein sce4808 3 None None None 162449486 Common - hypothetical protein sce1216 7 None None None 162451111 Common - Exodeoxyribonuclease V beta chain sce2839 60 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 162453480 Common - phosphoserine phosphatase sce5204 158 COG1609 PurR, Transcriptional regulators Transcription 162457529 Nonpathogen - hypothetical protein sce9243 1 None None None 162453004 Common - probable oxidoreductase sce4728 202 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162455061 Common - hypothetical protein sce6779 3 COG4907 COG4907, Predicted membrane protein Function unknown 162452296 Common - anti-anti sigma factor protein sce4022 73 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162453958 Common - hypothetical protein sce5682 31 COG1336 COG1336, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 162448860 Nonpathogen - hypothetical protein sce0590 1 None None None 162448586 Common - hypothetical protein sce0316 9 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162453712 Nonpathogen - hypothetical protein sce5436 2 None None None 162456797 Common - hypothetical protein sce8514 78 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 162449003 Nonpathogen - hypothetical protein sce0733 1 None None None 162454745 Common - OmpA-domain outer membrane protein sce6463 166 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162453218 Nonpathogen - hypothetical protein sce4942 1 COG4907 COG4907, Predicted membrane protein Function unknown 162453028 Common - Protein kinase sce4752 63 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454816 Nonpathogen - putative secreted protein sce6534 1 None None None 162449947 Common - cyclic nucleotide binding protein sce1676 150 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162453043 Common - anti-anti sigma factor protein sce4767 89 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162452873 Common licS Endo-beta-1,3-1,4 glucanase sce4597 11 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 162451836 Nonpathogen - hypothetical protein sce3563 3 None None None 162453845 Common - hypothetical protein sce5569 8 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162453494 Nonpathogen - ECF-family RNA polymerase sigma factor sce5218 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453521 Common ldh L-lactate dehydrogenase sce5245 165 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 162451072 Common - hypothetical protein sce2800 9 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 162448623 Common - Protein kinase sce0353 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457278 Nonpathogen - hypothetical protein sce8993 1 COG1791 COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 162448318 Common - Thiolase sce0049 182 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 162456478 Common - helicase-related protein sce8195 236 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 162451883 Common rsbX1 Phosphoserine phosphatase sce3610 30 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162448571 Nonpathogen - hypothetical protein sce0301 1 None None None 162448944 Common ppgK Polyphosphate-glucose phosphotransferase sce0674 94 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 162450742 Common - Protein kinase sce2470 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453528 Nonpathogen - Putative translation initiation factor IF-2 sce5252 1 None None None 162456692 Nonpathogen - hypothetical protein sce8409 1 None None None 162448409 Nonpathogen - hypothetical protein sce0139 1 None None None 162453868 Common - Protein kinase sce5592 137 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454911 Common - hydrolase, alpha/beta fold family sce6629 37 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162451780 Common - two-component hybrid sensor and regulator sce3507 226 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162452798 Common - hypothetical protein sce4522 18 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 162456892 Common himA integration host factor alpha-subunit sce8609 200 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 162455942 Common argS hypothetical protein sce7660 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162453477 Common - hypothetical protein sce5201 167 COG1609 PurR, Transcriptional regulators Transcription 162451441 Common - hypothetical protein sce3169 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453288 Common - hypothetical protein sce5012 17 COG2405 COG2405, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 162456587 Common - Hypothetical UPF0079 protein yjeE sce8304 17 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 162454839 Common - hypothetical protein sce6557 107 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 162456278 Common gpsA2 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) sce7995 201 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 162453859 Common - putative branched-chain amino acid transport system ATP-binding protein sce5583 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 162449545 Nonpathogen - putative transcriptional regulator, membrane protein sce1274 1 None None None 162449844 Common lipA hypothetical protein sce1573 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 162450796 Common - hypothetical protein sce2524 170 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162451650 Common - ABC transporter permease protein sce3378 171 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162452145 Common - putative cyclase/dehyrase sce3872 7 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 162448563 Common - putative transcriptional activator of the Baf family sce0293 121 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 162451319 Nonpathogen - hypothetical protein sce3047 1 COG5373 COG5373, Predicted membrane protein Function unknown 162449021 Common - transcriptional regulator, GntR family sce0751 134 COG2186 FadR, Transcriptional regulators Transcription 162449264 Nonpathogen - hypothetical protein sce0994 6 None None None 162449240 Nonpathogen - hypothetical protein sce0970 5 None None None 162450141 Common - hypothetical protein sce1870 10 COG3945 COG3945, Uncharacterized conserved protein Function unknown 162452029 Common - hypothetical protein sce3756 4 None None None 162454323 Nonpathogen - putative S-layer protein fragment sce6046 3 None None None 162455192 Common - Phosphoglycerate mutase family protein sce6910 87 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 162451474 Nonpathogen - hypothetical protein sce3202 1 None None None 162455457 Common rimK2 hypothetical protein sce7175 24 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 162452718 Common - hypothetical protein sce4442 33 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162453366 Common gst12 putative glutathione S-transferase sce5090 11 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162456125 Nonpathogen - hypothetical protein sce7842 1 None None None 162452592 Common exbD putative biopolymer transport protein (ExbD-like) sce4316 135 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162453045 Common - ABC-type transporter, permease protein sce4769 196 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162452956 Nonpathogen - hypothetical protein sce4680 1 None None None 162456955 Nonpathogen - hypothetical protein sce8672 1 None None None 162449858 Common - Protein kinase sce1587 127 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457164 Common - putative glutathione S-transferase sce8879 12 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448574 Nonpathogen - hypothetical protein sce0304 2 None None None 162448733 Nonpathogen - hypothetical protein sce0463 1 None None None 162448550 Nonpathogen - hypothetical protein sce0280 9 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162450291 Nonpathogen - hypothetical protein sce2019 1 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 162456689 Common - put. Acetylxylan esterase sce8406 126 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162457063 Common - Permease sce8778 9 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 162449516 Common - putative Alpha-arabinofuranosidase sce1246 32 COG3940 COG3940, Predicted beta-xylosidase General function prediction only 162455128 Common - hypothetical protein sce6846 9 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 162453676 Common xseB exodeoxyribonuclease VII small subunit sce5400 4 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 162455121 Common pelA hypothetical protein sce6839 18 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 162451787 Nonpathogen - putative secreted protein sce3514 9 COG3921 COG3921, Uncharacterized protein conserved in bacteria Function unknown 162455850 Common gshB glutathione synthetase sce7568 124 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 162449871 Common mltD1 murein transglycosylase sce1600 129 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 162450304 Common pmbA PmbA protein sce2032 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 162454023 Common - rrf2 family protein sce5747 101 COG1959 COG1959, Predicted transcriptional regulator Transcription 162454974 Common - hypothetical exported glycine-rich protein sce6692 39 COG4907 COG4907, Predicted membrane protein Function unknown 162448900 Nonpathogen - hypothetical protein sce0630 1 None None None 162456660 Nonpathogen - hypothetical protein sce8377 2 None None None 162455406 Common - hypothetical protein sce7124 55 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162450444 Common - hypothetical protein sce2172 12 None None None 162456080 Nonpathogen - hypothetical protein sce7798 11 COG1359 COG1359, Uncharacterized conserved protein Function unknown 162449488 Nonpathogen - putative secreted protein sce1218 2 None None None 162455460 Common - hypothetical protein sce7178 30 COG4637 COG4637, Predicted ATPase General function prediction only 162452176 Common lspA2 Signal peptidase II sce3903 133 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162456253 Nonpathogen - CG10953 gene product sce7970 2 COG5373 COG5373, Predicted membrane protein Function unknown 162454490 Common - Protein kinase sce6210 119 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455752 Common tolA hypothetical protein sce7470 17 COG5552 COG5552, Uncharacterized conserved protein Function unknown 162452084 Common ribD1 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase sce3811 230 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 162454078 Common serA2 D-3-phosphoglycerate dehydrogenase sce5802 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 162448776 Common - putative integral membrane protein sce0506 96 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162448990 Common - hypothetical protein sce0720 4 None None None 162452878 Nonpathogen - Hypothetical protein-signal peptide prediction sce4602 6 None None None 162448790 Nonpathogen - hypothetical protein sce0520 10 None None None 162448903 Nonpathogen - hypothetical proline rich protein sce0633 1 COG5373 COG5373, Predicted membrane protein Function unknown 162448422 Nonpathogen - Polynucleotide adenyltransferase sce0152 3 COG5186 PAP1, Poly(A) polymerase RNA processing and modification 162456846 Nonpathogen - hypothetical protein sce8563 1 None None None 162454115 Common pdxJ Pyridoxine-5-phosphate synthase sce5839 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 162449669 Nonpathogen - hypothetical protein sce1398 1 None None None 162455788 Common - hypothetical protein sce7506 5 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 162456914 Common apbE putative thiamine biosynthesis lipoprotein ApbE sce8631 138 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 162452503 Common - hypothetical protein sce4227 19 None None None 162456489 Nonpathogen - hypothetical protein sce8206 2 None None None 162451456 Common - hypothetical protein sce3184 20 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 162454177 Common gshA Glutamate--cysteine ligase sce5900 53 COG3572 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 162453209 Common - hypothetical protein sce4933 108 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162454897 Common - group II intron, maturase sce6615 97 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 162453470 Common - hypothetical protein sce5194 15 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162454938 Common - Sigma-54 dependent transcriptional regulator sce6656 176 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162457205 Common - Hypothetical protein-signal peptide and transmembrane prediction sce8920 7 None None None 162449793 Nonpathogen - hypothetical protein sce1522 1 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 162455964 Common pgiY Bacteriophage phiC31 resistance gene sce7682 9 None None None 162448415 Nonpathogen - hypothetical protein sce0145 1 None None None 162449100 Nonpathogen - hypothetical protein sce0830 3 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162456444 Common bioD hypothetical protein sce8161 6 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 162456482 Nonpathogen - hypothetical protein sce8199 1 COG5373 COG5373, Predicted membrane protein Function unknown 162450434 Nonpathogen - hypothetical protein sce2162 1 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 162454727 Common - hypothetical protein sce6445 206 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162449012 Nonpathogen - hypothetical protein sce0742 1 None None None 162449142 Common aroB1 3-dehydroquinate synthase sce0872 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 162453156 Nonpathogen - hypothetical protein sce4880 1 None None None 162455431 Nonpathogen - hypothetical protein sce7149 2 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162453479 Nonpathogen - hypothetical protein sce5203 2 None None None 162455919 Common - DNA-directed DNA polymerase sce7637 158 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 162456093 Common - similar to xenobiotic reductase sce7811 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 162450095 Nonpathogen - hypothetical protein sce1824 1 None None None 162454065 Common glmM Phosphoglucosamine mutase sce5789 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 162448420 Common - Protein kinase sce0150 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452061 Common - hypothetical protein sce3788 71 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162452363 Nonpathogen - WD40 repeat-containing protein sce4087 7 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162457635 Common - hypothetical protein sce9349 39 None None None 162449395 Common gst3 putative glutathione S-transferase protein sce1125 99 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162454669 Common pcpB2 Pentachlorophenol monooxygenase sce6389 118 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162448631 Common treS Trehalose synthase sce0361 176 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 162450807 Common lysC1 Aspartate kinase sce2535 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 162455903 Nonpathogen - hypothetical protein sce7621 6 None None None 162455176 Nonpathogen - hypothetical protein sce6894 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162449511 Common - hypothetical protein sce1241 40 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162455346 Nonpathogen - hypothetical protein sce7064 1 None None None 162454157 Common yedX Transthyretin-related protein sce5881 63 COG2351 COG2351, Transthyretin-like protein General function prediction only 162448341 Common - hypothetical acetyltransferase sce0072 14 COG0456 RimI, Acetyltransferases General function prediction only 162453441 Common - Protein kinase sce5165 158 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457179 Nonpathogen - hypothetical protein sce8894 1 None None None 162455160 Nonpathogen - hypothetical protein sce6878 1 None None None 162451089 Common - hypothetical protein sce2817 21 None None None 162455841 Nonpathogen - hypothetical protein sce7559 1 None None None 162455320 Common lysA hypothetical protein sce7038 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 162448677 Common rplA hypothetical protein sce0407 242 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 162454657 Common - hypothetical protein sce6377 21 COG5434 PGU1, Endopygalactorunase Cell envelope biogenesis, outer membrane 162450271 Common - transcriptional regulator, MarR family sce1999 87 COG1846 MarR, Transcriptional regulators Transcription 162454386 Common - pseudogene sce_pseudo_08 30 None None None 162451495 Common - GntR-family transcriptional regulator sce3223 199 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162450758 Common mnaA UDP-N-acetylglucosamine 2-epimerase sce2486 151 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 162449626 Common kdpD sensor for high-affinity potassium transport system sce1355 219 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162454235 Common - Protein kinase sce5958 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456653 Nonpathogen - hypothetical protein sce8370 1 None None None 162457065 Common - putative secreted protein sce8780 44 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162453444 Common - sensor histidine kinase sce5168 30 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454784 Common - hypothetical protein sce6502 122 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162453261 Common - hypothetical protein sce4985 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 162457585 Common - putative ATP-dependent protease sce9299 58 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 162452546 Common - hypothetical protein sce4270 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 162448595 Nonpathogen - hypothetical protein sce0325 2 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 162451158 Common - hypothetical protein sce2886 69 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162449524 Common - Cation-transporting ATPase sce1254 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 162456693 Nonpathogen - hypothetical protein sce8410 1 None None None 162451235 Common ahcY Adenosylhomocysteinase sce2963 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 162454563 Common - transposase sce6283 9 None None None 162454517 Common - CoA-substrate-specific enzyme activase domain protein sce6237 65 COG3580 COG3580, Uncharacterized protein conserved in bacteria Function unknown 162452576 Common - peptide ABC transporter, permease protein sce4300 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162454677 Common yeiA Dihydropyrimidine dehydrogenase sce6397 165 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 162454340 Common - hypothetical protein sce6063 184 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 162454946 Nonpathogen - hypothetical protein sce6664 3 None None None 162456457 Common leuA3 2-isopropylmalate synthase sce8174 205 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 162453751 Nonpathogen - hypothetical protein sce5475 1 None None None 162448446 Common ilvE1 Branched-chain-amino-acid transaminase sce0176 209 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 162452631 Common zwf1 hypothetical protein sce4355 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 162456119 Nonpathogen - hypothetical protein sce7836 7 None None None 162448546 Common - hypothetical protein sce0276 63 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162448710 Nonpathogen - hypothetical protein sce0440 2 None None None 162456401 Common - hypothetical protein sce8118 59 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162457182 Common - ECF-family RNA polymerase sigma factor sce8897 94 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448525 Nonpathogen - hypothetical protein sce0255 1 None None None 162455243 Common gst16 probable glutathione S-transferase sce6962 99 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162452043 Common - putative Phytoene dehydrogenase-related protein sce3770 82 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162453900 Common cypA4 Cytochrome P450 CYP266A1 sce5624 94 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162455027 Common - hypothetical protein sce6745 43 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162452699 Common - hypothetical protein sce4423 22 None None None 162450530 Nonpathogen - hypothetical protein sce2258 2 None None None 162456752 Common - putative protein phosphatase sce8469 84 COG0622 COG0622, Predicted phosphoesterase General function prediction only 162449612 Nonpathogen - hypothetical protein sce1341 1 None None None 162449649 Common - Acetyltransferases sce1378 85 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162456499 Nonpathogen - hypothetical protein sce8216 1 None None None 162454968 Common - hypothetical protein sce6686 95 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 162456052 Common - hypothetical protein sce7770 11 COG2263 COG2263, Predicted RNA methylase Translation, ribosomal structure and biogenesis 162451794 Common - hypothetical protein sce3521 11 None None None 162455215 Common - Riboflavin biosynthesis protein sce6933 206 COG0196 RibF, FAD synthase Coenzyme metabolism 162452039 Common - Protein kinase sce3766 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448846 Common - low molecular weight heat shock protein sce0576 121 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 162456400 Common - probable hydrolase, alpha/beta fold family protein sce8117 33 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162455756 Common - hypothetical protein sce7474 30 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162453342 Nonpathogen - hypothetical protein sce5066 1 None None None 162451798 Common cysK2 Cysteine synthase A sce3525 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162453349 Common - DNA-binding response regulator sce5073 212 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162448812 Common - probable peptidase sce0542 19 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 162449246 Common - hypothetical protein sce0976 5 COG3428 COG3428, Predicted membrane protein Function unknown 162456659 Common - Lactoylglutathione lyase sce8376 10 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162452911 Common - Cytochrome P450 CYP259A1 sce4635 86 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162451094 Common - sensory transduction histidine kinase sce2822 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162456425 Nonpathogen - hypothetical protein sce8142 1 None None None 162453505 Nonpathogen - ECF-family RNA polymerase sigma factor sce5229 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452210 Common - hypothetical protein sce3937 4 None None None 162455484 Nonpathogen - hypothetical protein sce7202 1 None None None 162456285 Nonpathogen - hypothetical protein sce8002 1 None None None 162450489 Common - probable proteinase sce2217 140 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 162449054 Common micA tRNA (guanine-N7-)-methyltransferase sce0784 155 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 162454228 Common era GTP binding protein sce5951 225 COG1159 Era, GTPase General function prediction only 162451479 Common - two component sensor kinase sce3207 193 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162457189 Common - hypothetical protein sce8904 21 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162454242 Common - Protein kinase sce5965 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452230 Nonpathogen - putative cAMP phosphodiesterase sce3957 4 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 162454339 Common - hypothetical protein sce6062 17 COG4021 COG4021, Uncharacterized conserved protein Function unknown 162450661 Common cysK1 hypothetical protein sce2389 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162448301 Common - CRP family of transcriptional regulators sce0032 35 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162450902 Common - hypothetical protein sce2630 12 None None None 162456715 Nonpathogen - hypothetical protein sce8432 3 None None None 162453015 Nonpathogen - hypothetical protein sce4739 5 None None None 162452823 Nonpathogen - hypothetical protein sce4547 1 None None None 162455822 Nonpathogen - hypothetical protein sce7540 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162456077 Common - hypothetical protein sce7795 22 None None None 162457541 Nonpathogen - putative secreted protein sce9255 1 None None None 162450290 Nonpathogen - hypothetical protein sce2018 1 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 162454286 Common - putative spore coat protein-like protein sce6009 73 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162453168 Common hgo Homogentisate 1,2-dioxygenase sce4892 48 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162455393 Common - hypothetical protein sce7111 20 COG1359 COG1359, Uncharacterized conserved protein Function unknown 162457461 Common devS Fruiting body developmental protein S. sce9175 4 COG1688 COG1688, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 162453010 Nonpathogen - hypothetical protein sce4734 2 None None None 162457348 Nonpathogen - putative secreted protein sce9063 4 None None None 162452849 Common - hydroxylase or oxidoreductase sce4573 78 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 162454660 Nonpathogen - hypothetical protein sce6380 1 None None None 162456670 Common - ECF-family RNA polymerase sigma factor sce8387 64 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448416 Nonpathogen - hypothetical protein sce0146 1 None None None 162452058 Common uvrA2 excinuclease ABC subunit A sce3785 238 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 162457156 Nonpathogen - partially conserved glycine-rich hypothetical protein sce8871 2 COG4371 COG4371, Predicted membrane protein Function unknown 162453216 Common - hypothetical protein sce4940 22 COG5099 COG5099, RNA-binding protein of the Puf family, translational repressor Translation, ribosomal structure and biogenesis 162457619 Nonpathogen - hypothetical protein sce9333 1 None None None 162449880 Common - Protein kinase sce1609 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455831 Common - Isobutyryl-CoA mutase sce7549 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 162455895 Common - putative oxidoreductase sce7613 19 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 162456706 Nonpathogen - hypothetical protein sce8423 1 None None None 162448604 Common - ATP-dependent Clp protease, ATP-binding subunit , two ATP-binding domains sce0334 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162451393 Nonpathogen - hypothetical protein sce3121 1 None None None 162449967 Nonpathogen - hypothetical protein sce1696 1 None None None 162453907 Nonpathogen - hypothetical protein sce5631 2 None None None 162454086 Common - probable alkaline serine protease sce5810 72 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162455428 Common - hypothetical protein sce7146 16 COG3541 COG3541, Predicted nucleotidyltransferase General function prediction only 162451379 Nonpathogen - hypothetical protein sce3107 2 None None None 162457341 Common manAC mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase sce9056 161 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 162451056 Common pp2c4 Phosphoprotein phosphatase sce2784 138 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162451745 Nonpathogen - Putative integral membrane protein sce3472 1 None None None 162452655 Nonpathogen - putative secreted protein sce4379 1 None None None 162457012 Nonpathogen - putative secreted protein sce8727 3 None None None 162451137 Common - hypothetical protein sce2865 17 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162453599 Common pilT3 twitching motility protein PilT sce5323 186 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 162457464 Nonpathogen - hypothetical protein sce9178 1 None None None 162451346 Nonpathogen - putative secreted protein sce3074 1 None None None 162453735 Common - putative acetyltransferase sce5459 114 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162453574 Common holA putative DNA polymerase III, delta subunit sce5298 32 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 162452921 Common - conserved hypothetical secreted protein sce4645 38 COG4805 COG4805, Uncharacterized protein conserved in bacteria Function unknown 162450783 Common - hypothetical protein sce2511 25 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162456922 Common - hypothetical protein sce8639 75 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162453306 Nonpathogen - hypothetical protein sce5030 7 None None None 162448294 Nonpathogen - hypothetical protein sce0025 1 COG5373 COG5373, Predicted membrane protein Function unknown 162454851 Nonpathogen - hypothetical protein sce6569 1 None None None 162454842 Common - hypothetical protein sce6560 21 COG2322 COG2322, Predicted membrane protein Function unknown 162449204 Common - hypothetical protein sce0934 98 COG3808 OVP1, Inorganic pyrophosphatase Energy production and conversion 162448819 Common glgA1 glycogen synthase sce0549 115 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162454595 Common uvrA3 similar to excinuclease ABC (subunit A) sce6315 227 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 162455873 Common - hypothetical protein sce7591 26 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 162452475 Common fdh1 alcohol dehydrogenase sce4199 213 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162450079 Nonpathogen - hypothetical protein sce1808 10 None None None 162454221 Nonpathogen - hypothetical protein sce5944 3 COG5373 COG5373, Predicted membrane protein Function unknown 162449896 Common hemC Hydroxymethylbilane synthase sce1625 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 162453237 Nonpathogen - hypothetical protein sce4961 1 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 162455156 Common - hypothetical protein sce6874 23 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 162454981 Nonpathogen - hypothetical protein sce6699 1 None None None 162453331 Common qcrC hypothetical protein sce5055 3 COG3258 COG3258, Cytochrome c Energy production and conversion 162451230 Common - putative secreted protein sce2958 120 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 162452343 Nonpathogen - hypothetical protein sce4067 3 None None None 162450342 Common - putative zinc protease sce2070 158 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162452527 Common tolR2 biopolymer transport protein, ExbD/TolR family sce4251 14 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162454861 Common - hypothetical protein sce6579 7 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162456019 Common - hypothetical protein sce7737 24 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162453822 Nonpathogen - putative transcriptional regulator TenA family sce5546 1 None None None 162454484 Common - O-6-alkylguanine-DNA/cysteine-protein methyltransferase sce6204 220 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 162455787 Nonpathogen - hypothetical protein sce7505 2 None None None 162456525 Common aldH Aldehyde dehydrogenase (NAD(+)) sce8242 174 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162452948 Nonpathogen - hypothetical protein sce4672 2 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 162454931 Nonpathogen - hypothetical protein sce6649 1 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162451419 Common clpP2 Endopeptidase Clp sce3147 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162452862 Common - Protein kinase sce4586 138 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448910 Common - hypothetical protein sce0640 28 None None None 162453587 Common - anti-anti sigma factor protein sce5311 111 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162448748 Common yfbK hypothetical protein sce0478 66 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162448676 Common rplK 50S ribosomal protein L11 sce0406 247 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 162451358 Common - hypothetical protein sce3086 6 None None None 162449158 Common - glycosyltransferase sce0888 202 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162449025 Nonpathogen - hypothetical protein sce0755 3 None None None 162449362 Nonpathogen - hypothetical protein sce1092 3 None None None 162454720 Common nudF MutT/nudix family protein sce6438 45 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162448390 Common - putative ompA family protein sce0120 171 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162449492 Common - Putative araC-like transcription regulator sce1222 118 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162451694 Nonpathogen - Mitogen-activated protein kinase 6 sce3422 1 None None None 162453484 Common - conserved hypothetical protein DUF820 domain sce5208 25 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162456087 Common - conserved hypothetical protein containing a vWA domain sce7805 26 COG2425 COG2425, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162450673 Common - Carboxyl-and carbamoyltransferase sce2401 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 162457476 Common - putative 4-aminobutyrate transaminase. sce9190 234 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 162457105 Nonpathogen - putative secreted protein sce8820 1 None None None 162449926 Common - putative isobutyryl-CoA mutase, chain B sce1655 111 COG2185 Sbm, Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) Lipid metabolism 162455868 Common moz hypothetical protein sce7586 40 COG5557 COG5557, Polysulphide reductase Energy production and conversion 162448842 Common gltX1 hypothetical protein sce0572 221 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 162456635 Nonpathogen - hypothetical protein sce8352 1 None None None 162457283 Common - putative secreted protein sce8998 203 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162451637 Common - Putative sugar ABC transporter sce3365 14 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162454921 Nonpathogen - hypothetical protein sce6639 1 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 162451310 Common - L-aspartate oxidase (LASPO) sce3038 24 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 162456888 Common - ABC transport protein, ATP-binding component sce8605 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 162451647 Common - Cytidine/deoxycytidylate deaminase sce3375 152 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 162454710 Nonpathogen - hypothetical protein sce6428 1 None None None 162456023 Nonpathogen - putative secreted protein sce7741 1 None None None 162449802 Common - hypothetical protein sce1531 7 None None None 162451929 Common - ECF-family RNA polymerase sigma factor sce3656 88 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451862 Common - Protein kinase sce3589 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455418 Common - anti-anti sigma factor protein sce7136 71 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162456328 Nonpathogen - putative secreted protein sce8045 1 None None None 162453062 Common cysK4 hypothetical protein sce4786 227 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162450236 Common - transcriptional regulator, LysR family sce1964 151 COG0583 LysR, Transcriptional regulator Transcription 162449331 Common boxC Enoyl-CoA hydratase/isomerase sce1061 49 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162451047 Common - hypothetical protein sce2775 3 COG5373 COG5373, Predicted membrane protein Function unknown 162448670 Nonpathogen - Alanine/proline-rich protein sce0400 5 COG5373 COG5373, Predicted membrane protein Function unknown 162455833 Common - OmpA-like outer membrane domain protein sce7551 114 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162451737 Common - Putative phosphoesterase sce3464 19 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162453171 Nonpathogen - putative secreted protein sce4895 8 COG5373 COG5373, Predicted membrane protein Function unknown 162457313 Common prfA peptide chain release factor RF-1 sce9028 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 162452096 Common nadE NAD(+) synthase (glutamine-hydrolyzing) sce3823 122 COG0171 NadE, NAD synthase Coenzyme metabolism 162452060 Common - hypothetical protein sce3787 30 None None None 162454922 Nonpathogen - putative secreted protein sce6640 4 None None None 162451277 Common - hypothetical protein sce3005 14 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162452358 Nonpathogen - hypothetical protein sce4082 3 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 162455592 Nonpathogen - exported possibly membrane-associated protein sce7310 1 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162452593 Nonpathogen - hypothetical protein sce4317 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162449317 Common - hypothetical protein sce1047 5 None None None 162451326 Common glf UDP-galactopyranose mutase sce3054 58 COG0562 Glf, UDP-galactopyranose mutase Cell envelope biogenesis, outer membrane 162451411 Common - putative ABC transporter, ATP-binding protein sce3139 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 162451898 Nonpathogen - putative recombinase sce3625 1 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 162457226 Nonpathogen - hypothetical protein sce8941 1 None None None 162451221 Common ndk putative Nucleoside diphosphate kinase sce2949 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 162452769 Nonpathogen - hypothetical protein sce4493 1 None None None 162454181 Common - hypothetical protein sce5904 92 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162456220 Common rpsD2 30S ribosomal protein S4 sce7937 216 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 162457502 Nonpathogen - general secretory pathway protein G precursor sce9216 1 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 162448717 Common - hypothetical protein sce0447 10 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 162449536 Common - hypothetical protein missed_out 81 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 162451945 Common - sigma-54 dependent transcriptional regulator sce3672 168 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162451243 Common - hypothetical protein sce2971 8 None None None 162453351 Common - hypothetical membrane protein sce5075 39 COG2339 COG2339, Predicted membrane protein Function unknown 162456338 Nonpathogen - hypothetical protein sce8055 1 None None None 162448932 Common - transcriptional regulator, LacI family sce0662 125 COG1609 PurR, Transcriptional regulators Transcription 162450698 Nonpathogen - hypothetical protein sce2426 1 None None None 162455289 Common prfB2 putative peptide chain release factor homolog protein sce7007 205 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 162452188 Common nth1 endonuclease III sce3915 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 162449081 Nonpathogen - hypothetical protein sce0811 1 None None None 162452621 Common - hypothetical protein sce4345 49 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162452936 Common - permease of the major facilitator superfamily sce4660 141 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162451609 Common - [2Fe-2S]-binding protein sce3337 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 162452720 Common atpD H(+)-transporting two-sector ATPase sce4444 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 162454030 Nonpathogen thiF probable thiamine biosynthesis protein ThiF sce5754 1 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 162456594 Common livH branched-chain amino acid ABC transporter,permease protein sce8311 158 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 162454708 Nonpathogen - hypothetical protein sce6426 1 None None None 162454945 Common - putative hydrolase sce6663 151 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162451939 Common - dehydrogenase/reductase (SDR family) member sce3666 42 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162450039 Nonpathogen - hypothetical protein sce1768 1 COG4371 COG4371, Predicted membrane protein Function unknown 162456598 Common - hypothetical secreted peptidase sce8315 10 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 162452190 Common - putative transport system kinase sce3917 99 COG1703 ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family Amino acid transport and metabolism 162454603 Common cypA5 Cytochrome P450 CYP264A1 sce6323 77 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162449032 Common - Prolyl endopeptidase sce0762 119 COG1505 COG1505, Serine proteases of the peptidase family S9A Amino acid transport and metabolism 162454770 Common - putative competence-damage associated protein sce6488 161 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 162456866 Common - hypothetical protein sce8583 113 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162455916 Nonpathogen - hypothetical protein sce7634 3 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162449414 Nonpathogen - hypothetical protein sce1144 1 None None None 162455262 Common - conserved carbohydrate-binding protein, Rhs family sce6980 57 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162453641 Nonpathogen - hypothetical protein sce5365 1 None None None 162456307 Common - putative NADH dehydrogenase (ubiquinone). sce8024 31 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 162449599 Common - hypothetical protein sce1328 35 COG4276 COG4276, Uncharacterized conserved protein Function unknown 162456514 Nonpathogen - hypothetical protein sce8231 1 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162455970 Common - Protein kinase sce7688 228 COG3899 COG3899, Predicted ATPase General function prediction only 162457445 Common potB1 spermidine/putrescine transport system permease protein sce9159 149 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 162451407 Nonpathogen - hypothetical protein sce3135 1 None None None 162456948 Nonpathogen - hypothetical protein sce8665 1 COG5373 COG5373, Predicted membrane protein Function unknown 162448759 Nonpathogen - hypothetical protein sce0489 8 None None None 162457204 Nonpathogen - hypothetical protein sce8919 6 None None None 162456811 Nonpathogen - hypothetical protein sce8528 1 None None None 162455011 Nonpathogen - hypothetical protein sce6729 1 None None None 162453959 Nonpathogen - hypothetical protein sce5683 1 None None None 162452024 Nonpathogen - putative secreted protein sce3751 1 None None None 162455188 Common rimK1 ribosomal protein S6 modification protein sce6906 109 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 162451844 Common - hypothetical protein sce3571 47 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 162455987 Nonpathogen - hypothetical protein sce7705 2 None None None 162449557 Nonpathogen - RNA polymerase ECF-type sigma factor sce1286 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456215 Common - transcription termination factor Rho sce7932 208 COG1158 Rho, Transcription termination factor Transcription 162451040 Nonpathogen - putative secreted protein sce2768 5 None None None 162450876 Nonpathogen - hypothetical protein sce2604 1 None None None 162450181 Nonpathogen - hypothetical protein sce1910 2 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162451013 Nonpathogen - hypothetical protein sce2741 4 None None None 162448440 Common - Probable peroxiredoxin sce0170 218 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162451627 Common fabD2 [Acyl-carrier-protein] S-malonyltransferase sce3355 107 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 162453256 Common - hypothetical protein sce4980 107 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 162453622 Common glgC1 Glucose-1-phosphate adenylyltransferase sce5346 168 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 162454057 Nonpathogen - hypothetical protein sce5781 1 COG5373 COG5373, Predicted membrane protein Function unknown 162455340 Nonpathogen - hypothetical protein sce7058 1 None None None 162453629 Nonpathogen - putative secreted protein sce5353 4 None None None 162457537 Common - hypothetical protein sce9251 19 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 162453604 Common ilvD2 Dihydroxy-acid dehydratase sce5328 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 162452538 Nonpathogen - hypothetical protein sce4262 3 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162454444 Common - Putative transcriptional regulator sce6164 27 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453673 Common gst13 hypothetical protein sce5397 119 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162456272 Common - membrane-associated zinc metalloprotease,putative sce7989 211 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 162456961 Common rpsT 30S ribosomal protein S20 sce8677 120 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 162457280 Common - hypothetical protein sce8995 216 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 162454408 Nonpathogen - hypothetical protein sce6129 1 None None None 162451762 Common - Nitrite reductase small subunit, probable sce3489 73 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 162453936 Common - hypothetical protein sce5660 17 None None None 162455449 Common cypA6 hypothetical protein sce7167 82 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162448808 Common - Protein kinase sce0538 150 COG3899 COG3899, Predicted ATPase General function prediction only 162452351 Nonpathogen - hypothetical protein sce4075 1 None None None 162451483 Common - hypothetical protein sce3211 97 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162450188 Nonpathogen - hypothetical protein sce1916 3 None None None 162453512 Nonpathogen - TPR repeat hypothetical protein sce5236 1 None None None 162457238 Common - hypothetical protein sce8953 12 COG5297 CelA, Cellobiohydrolase A (1,4-beta-cellobiosidase A) Carbohydrate transport and metabolism 162450139 Common sdaA L-serine dehydratase sce1868 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 162452073 Common aceE Pyruvate dehydrogenase (acetyl-transferring) sce3800 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 162452626 Common - hypothetical membrane protein sce4350 12 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162455922 Nonpathogen - hypothetical protein sce7640 1 None None None 162449905 Common lysS Lysine--tRNA ligase sce1634 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 162449019 Nonpathogen - putative secreted protein sce0749 1 None None None 162453229 Common - hypothetical protein sce4953 4 None None None 162452810 Common - Protein kinase sce4534 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454696 Common - hypothetical protein sce6416 46 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 162455580 Common - hypothetical protein sce7298 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162452270 Common - Protein kinase sce3997 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451706 Common - hypothetical protein sce3434 24 None None None 162455105 Common - NRPS/PKS hybrid sce6823 236 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162456858 Nonpathogen - PE-PGRS family protein sce8575 2 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162449443 Common - histidine kinase sce1173 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450194 Nonpathogen nuiA putative sugar-non-specific nuclease inhibitor NuiA homolog sce1922 5 None None None 162451885 Common rsbS highly similar to negative regulation of sigma-B activity sce3612 29 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162450025 Common glpC hypothetical protein sce1754 106 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 162450043 Common - Uncharacterized conserved protein involved in stress response sce1772 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 162455184 Common - polyA polymerase related protein sce6902 33 COG4639 COG4639, Predicted kinase General function prediction only 162448723 Common - DNA repair protein sce0453 140 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 162454764 Nonpathogen - hypothetical protein sce6482 1 None None None 162452197 Common - 3-dehydroquinate dehydratase sce3924 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 162450478 Common - two component response regulator sce2206 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162454827 Common - hypothetical protein sce6545 16 COG4324 COG4324, Predicted aminopeptidase General function prediction only 162450175 Nonpathogen - hypothetical protein sce1904 5 None None None 162454498 Nonpathogen - hypothetical protein sce6218 3 None None None 162453663 Common - hypothetical protein sce5387 3 None None None 162450143 Nonpathogen - hypothetical protein sce1872 11 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 162449114 Common rplW 50S ribosomal protein L23 sce0844 213 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 162457485 Nonpathogen - hypothetical protein sce9199 1 None None None 162449556 Nonpathogen - hypothetical protein sce1285 1 None None None 162449751 Nonpathogen - hypothetical protein sce1480 1 None None None 162448684 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase sce0414 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 162454575 Nonpathogen - hypothetical protein sce6295 4 None None None 162450217 Nonpathogen - hypothetical protein sce1945 1 None None None 162451592 Common - hypothetical protein sce3320 10 None None None 162455764 Nonpathogen - hypothetical protein sce7482 1 None None None 162453298 Common - hypothetical protein sce5022 184 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162450771 Nonpathogen - hypothetical protein sce2499 1 None None None 162454651 Common - transcriptional regulator, AraC family sce6371 81 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162450251 Nonpathogen - hypothetical protein sce1979 1 None None None 162451386 Common - hypothetical protein sce3114 61 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162453419 Common - hypothetical protein sce5143 46 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162451755 Common - ECF-family RNA polymerase sigma factor sce3482 109 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452836 Nonpathogen - hypothetical protein sce4560 1 None None None 162451869 Common - hypothetical protein sce3596 122 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162451017 Common - RNA polymerase sigma factor sce2745 12 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453438 Nonpathogen - hypothetical protein sce5162 1 None None None 162451811 Common - Protein kinase sce3538 128 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454125 Common - putative outer membrane protein sce5849 164 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162453189 Common - hypothetical protein sce4913 50 COG3665 COG3665, Uncharacterized conserved protein Function unknown 162450679 Common rpmG2 hypothetical protein sce2407 69 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 162451582 Common araA hypothetical protein sce3310 35 COG2160 AraA, L-arabinose isomerase Carbohydrate transport and metabolism 162456968 Common - hypothetical protein sce8684 40 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 162456188 Common - hypothetical protein sce7905 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 162452004 Common ilvN Acetolactate synthase sce3731 191 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 162452965 Nonpathogen - hypothetical protein sce4689 1 None None None 162456545 Common - non-ribosomal peptide synthetase sce8262 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162450548 Common - hypothetical protein sce2276 25 None None None 162450105 Common - hypothetical protein sce1834 143 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 162451009 Common czcA1 cobalt/zinc/cadmium efflux RND transporter,permease protein, CzcA family sce2737 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 162450324 Nonpathogen - hypothetical protein sce2052 1 None None None 162453814 Nonpathogen - hypothetical protein sce5538 7 COG4907 COG4907, Predicted membrane protein Function unknown 162449658 Common abgT putative integral membrane efflux protein sce1387 38 COG2978 AbgT, Putative p-aminobenzoyl-glutamate transporter Coenzyme metabolism 162453179 Nonpathogen - hypothetical protein sce4903 5 None None None 162452030 Common ntcA global nitrogen regulatory protein, CRP family of transcriptional regulators sce3757 138 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162455082 Common - hypothetical protein sce6800 36 COG4628 COG4628, Uncharacterized conserved protein Function unknown 162448857 Common - probable acyl-CoA dehydrogenase sce0587 144 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162455143 Common - hypothetical protein similar to eukaryotic regulators / effectors sce6861 10 None None None 162451681 Nonpathogen - hypothetical protein sce3409 1 None None None 162449605 Common - hypothetical protein sce1334 49 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 162454269 Nonpathogen - hypothetical protein sce5992 1 None None None 162455302 Common - transcriptional regulator, AraC family sce7020 137 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162448273 Common grpE chloroplast GrpE protein sce0004 231 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 162450449 Common - hypothetical protein sce2177 32 COG3320 COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162453055 Common - hypothetical protein sce4779 52 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 162449590 Common - hypothetical protein sce1319 9 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162454148 Common - putative SAM-dependent methyltransferase sce5872 76 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162454163 Nonpathogen - hypothetical protein sce5887 1 None None None 162449299 Common - exporter of the RND superfamily sce1029 51 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 162452055 Common - hypothetical protein sce3782 39 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 162456680 Common - putative membrane protein (GAF and GGDEF domain) sce8397 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162455559 Common tdh Threonine 3-dehydrogenase sce7277 198 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162448896 Common - putative electron transfer flavoprotein beta-subunit sce0626 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 162454406 Nonpathogen - hypothetical protein sce6127 1 None None None 162454019 Nonpathogen - Putative Gluconolactonase sce5743 5 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162452416 Common - TonB dependent receptor sce4140 117 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 162453094 Common fabG8 3-oxoacyl-[acyl-carrier-protein] reductase sce4818 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162456044 Common - Response regulator sce7762 17 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453240 Nonpathogen - hypothetical protein sce4964 1 None None None 162455934 Common - Acetyl-CoA acyltransferase sce7652 180 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 162456577 Common - hypothetical protein sce8294 104 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 162450170 Common - hypothetical transposase sce1899 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162453761 Common - Putative dehydrogenase sce5485 218 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 162456349 Common - exported OmpA domain protein sce8066 172 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162451192 Common - tetratricopeptide repeat protein sce2920 48 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 162449215 Common mltE soluble lytic murein transglycosylase sce0945 161 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 162456158 Nonpathogen - hypothetical protein sce7875 1 None None None 162452760 Nonpathogen - Transketolase C-terminal-like domain sce4484 4 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 162449192 Nonpathogen - hypothetical protein sce0922 1 None None None 162449580 Common - hypothetical protein sce1309 13 None None None 162449451 Nonpathogen - hypothetical protein sce1181 1 None None None 162454508 Common - Probable serine proteinase sce6228 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162453692 Nonpathogen - hypothetical protein sce5416 2 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162456962 Nonpathogen - hypothetical protein sce8678 1 None None None 162450030 Common argH hypothetical protein sce1759 219 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 162457200 Common hisC4 Histidinol-phosphate transaminase sce8915 237 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 162448285 Common uroS Porphobilinogen synthase sce0016 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 162453559 Common - hypothetical protein sce5283 9 COG3292 COG3292, Predicted periplasmic ligand-binding sensor domain Signal transduction mechanisms 162455846 Common fecE ABC transporter, nucleotide binding/ATPase protein sce7564 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 162456982 Nonpathogen - hypothetical protein sce8698 1 None None None 162456723 Nonpathogen - hypothetical protein sce8440 4 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 162453064 Common ndhF1 probable NADH dehydrogenase subunit sce4788 202 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 162449652 Nonpathogen - putative nuclease sce1381 1 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 162450912 Nonpathogen - hypothetical protein sce2640 2 None None None 162456034 Nonpathogen - putative secreted protein sce7752 1 None None None 162448957 Common - Protein kinase sce0687 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450736 Common hisD hypothetical protein sce2464 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 162455950 Nonpathogen - putative secreted Protease inhibitor sce7668 9 None None None 162450080 Common - hypothetical protein sce1809 111 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162456072 Common - hypothetical protein sce7790 66 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162456006 Nonpathogen - hypothetical protein sce7724 7 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 162452261 Common - hypothetical protein sce3988 224 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 162450151 Common - putative reductase sce1880 97 COG0431 COG0431, Predicted flavoprotein General function prediction only 162451686 Common - putative secreted lyase sce3414 12 COG3889 COG3889, Predicted solute binding protein General function prediction only 162456461 Nonpathogen - hypothetical protein sce8178 1 None None None 162453682 Nonpathogen - hypothetical protein sce5406 1 None None None 162448872 Common gst2 hypothetical protein sce0602 65 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162451004 Nonpathogen - putative cell surface protein sce2732 3 None None None 162454372 Common - Predicted P-loop ATPase sce6095 22 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 162453392 Common dprA DNA processing chain A sce5116 157 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 162451573 Nonpathogen - Hypothetical protein Y25C1A.3 sce3301 1 None None None 162456856 Common - transcriptional regulator, LysR family sce8573 102 COG0583 LysR, Transcriptional regulator Transcription 162450691 Common - Putative DnaJ class molecular chaperone sce2419 38 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162454501 Nonpathogen - hypothetical protein sce6221 1 None None None 162455339 Nonpathogen - hypothetical protein sce7057 3 None None None 162455884 Common - Protein kinase sce7602 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454470 Common - RNA polymerase sigma factor sce6190 105 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 162453922 Common yjgF hypothetical protein sce5646 62 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 162453466 Nonpathogen - hypothetical protein sce5190 1 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 162453271 Common - hypothetical protein sce4995 29 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 162450599 Nonpathogen - hypothetical protein sce2327 1 None None None 162457042 Nonpathogen - hypothetical protein sce8757 1 None None None 162451116 Nonpathogen - hypothetical protein sce2844 1 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 162455505 Common - hypothetical protein sce7223 13 None None None 162448697 Common - glycosyltransferase sce0427 129 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162448871 Common - probable glutathione S-transferase sce0601 98 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162455676 Common trpS hypothetical protein sce7394 234 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162457121 Common - two-component system sensor histidine kinase sce8836 95 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 162448557 Nonpathogen - hypothetical protein sce0287 3 None None None 162448640 Common ybbT putative ureidoglycolate hydrolase sce0370 35 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 162453358 Common - Protein kinase sce5082 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450583 Nonpathogen - hypothetical protein sce2311 8 COG4880 COG4880, Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats General function prediction only 162450410 Common - Putative multicopper oxidase sce2138 4 None None None 162453974 Nonpathogen - hypothetical protein sce5698 1 None None None 162449807 Common - transcriptional regulator, AraC family sce1536 110 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162453885 Nonpathogen - hypothetical protein sce5609 1 None None None 162456800 Common - ABC transporter, ATP-binding protein sce8517 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 162456398 Common - exported murein endopeptidase sce8115 11 COG3770 MepA, Murein endopeptidase Cell envelope biogenesis, outer membrane 162449295 Common - glycosyltransferase sce1025 194 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162455077 Nonpathogen - glycosyltransferase-like conserved protein sce6795 11 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162455794 Common yejK hypothetical protein sce7512 4 COG2886 COG2886, Uncharacterized small protein Function unknown 162453886 Nonpathogen - hypothetical protein sce5610 1 None None None 162451602 Common pit1 probable low-affinity inorganic phosphate permease sce3330 164 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 162452327 Common - hypothetical protein sce4053 5 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162455134 Nonpathogen - hypothetical protein sce6852 1 None None None 162451906 Nonpathogen - hypothetical protein sce3633 1 None None None 162453108 Nonpathogen - hypothetical protein sce4832 1 None None None 162455600 Common wzc2 protein tyrosine kinase sce7318 155 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 162455947 Nonpathogen - transcriptional regulator, AraC family sce7665 3 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162448634 Nonpathogen - putative general secretion pathway protein C sce0364 5 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 162457195 Nonpathogen - hypothetical protein sce8910 1 None None None 162450089 Nonpathogen - hypothetical protein sce1818 1 None None None 162453991 Common - TPR domain protein sce5715 20 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162449228 Nonpathogen - hypothetical protein sce0958 6 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162452646 Common nudC NADH pyrophosphatase sce4370 121 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 162456266 Nonpathogen - hypothetical protein sce7983 1 None None None 162456907 Common - Putative acyl-protein synthetase, LuxE sce8624 11 None None None 162454214 Common wza2 outer membrane protein performing polysaccharide export sce5937 117 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 162455605 Common - putative methyltransferase sce7323 44 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162449287 Nonpathogen - hypothetical protein sce1017 1 None None None 162457332 Common - putative secreted protein sce9047 7 None None None 162454143 Common - Probable serine protease sce5867 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162456893 Common - transcriptional regulator, MerR family sce8610 98 COG0789 SoxR, Predicted transcriptional regulators Transcription 162448462 Nonpathogen - hypothetical protein sce0192 1 None None None 162453929 Nonpathogen - hypothetical protein sce5653 1 None None None 162453592 Nonpathogen - hypothetical protein sce5316 2 None None None 162454635 Nonpathogen - hypothetical protein sce6355 1 None None None 162450132 Common - hypothetical protein sce1861 7 None None None 162456828 Common uup ABC transporter, ATP-binding protein sce8545 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162457002 Nonpathogen - hypothetical protein sce8718 2 None None None 162449636 Nonpathogen - hypothetical membrane protein sce1365 3 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162454425 Common - hypothetical protein sce6145 8 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 162454281 Common - hypothetical protein sce6004 37 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162454462 Nonpathogen - hypothetical protein sce6182 2 COG4908 COG4908, Uncharacterized protein containing a NRPS condensation (elongation) domain General function prediction only 162450677 Common lgt2 prolipoprotein diacylglyceryl transferase sce2405 138 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 162450717 Nonpathogen - hypothetical protein sce2445 4 COG2221 DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits Energy production and conversion 162450206 Common mnhC Na+/H+ antiporter sce1934 72 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 162448913 Nonpathogen - hypothetical protein sce0643 3 None None None 162456885 Nonpathogen - hypothetical protein sce8602 3 COG5373 COG5373, Predicted membrane protein Function unknown 162449642 Nonpathogen - PE-PGRS family protein sce1371 1 COG4907 COG4907, Predicted membrane protein Function unknown 162449423 Nonpathogen - hypothetical protein sce1153 1 None None None 162451508 Nonpathogen - hypothetical protein sce3236 1 None None None 162456202 Nonpathogen - TPR-like protein sce7919 5 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162457592 Common potA2 spermidine/putrescine transport system ATP-binding protein sce9306 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 162456132 Nonpathogen - putative secreted protein sce7849 1 None None None 162450514 Nonpathogen - putative hydrolase sce2242 3 None None None 162448498 Nonpathogen - hypothetical protein sce0228 1 None None None 162450978 Common - hypothetical protein sce2706 6 None None None 162457044 Common - conserved hypothetical protein with Apaf-1 domain sce8759 20 COG3903 COG3903, Predicted ATPase General function prediction only 162450649 Common malQ2 hypothetical protein sce2377 120 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 162451104 Nonpathogen - hypothetical protein sce2832 1 None None None 162453667 Nonpathogen - hypothetical protein sce5391 1 None None None 162452220 Common - Protein kinase sce3947 137 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453191 Common - Urea amidolyase-related protein sce4915 229 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 162452122 Common - hypothetical protein sce3849 21 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449918 Common - bacterioferritin-associated ferredoxin sce1647 20 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 162450341 Common - hypothetical protein sce2069 192 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162450240 Common - Methyltransferase sce1968 128 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162454589 Common - hypothetical protein sce6309 55 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162449929 Nonpathogen - hypothetical protein sce1658 1 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 162450057 Common - Acyl-CoA carboxylase subunit sce1787 171 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 162457188 Nonpathogen - hypothetical protein sce8903 1 None None None 162455352 Nonpathogen - peptidylglycine alpha-amidating monooxygenase sce7070 4 None None None 162452742 Nonpathogen - hypothetical protein sce4466 6 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162453660 Common - Membrane protease subunits, stomatin/prohibitin homologs sce5384 14 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 162451634 Nonpathogen - hypothetical protein sce3362 1 None None None 162448326 Nonpathogen - hypothetical protein sce0057 1 None None None 162453285 Common - bacterioferritin comigratory protein sce5009 225 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162457648 Common atpH H(+)-transporting two-sector ATPase sce9362 165 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 162453714 Common - hypothetical protein sce5438 128 COG1881 COG1881, Phospholipid-binding protein General function prediction only 162452708 Nonpathogen - hypothetical protein sce4432 5 COG1801 COG1801, Uncharacterized conserved protein Function unknown 162454596 Nonpathogen - putative exported alanine-rich protein sce6316 1 None None None 162455653 Common - ABC-2 type transport system ATP-binding protein sce7371 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162456036 Nonpathogen - putative secreted protein sce7754 2 None None None 162451807 Nonpathogen - hypothetical protein sce3534 6 None None None 162454135 Nonpathogen - hypothetical protein sce5859 1 COG5373 COG5373, Predicted membrane protein Function unknown 162455170 Common cynT hypothetical protein sce6888 153 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 162449489 Common - putative Methyltransferase sce1219 44 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 162450439 Common - ECF-family RNA polymerase sigma factor sce2167 35 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455520 Common - Fatty acid desaturase sce7238 70 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 162457046 Nonpathogen - hypothetical protein sce8761 1 None None None 162451303 Nonpathogen - hypothetical protein sce3031 1 None None None 162451534 Common cotH spore coat protein H sce3262 15 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 162450544 Nonpathogen - hypothetical protein sce2272 1 None None None 162450370 Nonpathogen - hypothetical protein sce2098 21 COG3299 XkdT, Uncharacterized homolog of phage Mu protein gp47 Function unknown 162450569 Nonpathogen - hypothetical protein sce2298 1 None None None 162452685 Common - hypothetical protein sce4409 85 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 162449282 Common - putative hydrolase sce1012 177 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162450379 Nonpathogen - hypothetical protein sce2107 1 None None None 162450432 Nonpathogen - hypothetical protein sce2160 1 None None None 162455365 Common - hypothetical protein sce7082 24 None None None 162449352 Nonpathogen - hypothetical protein sce1082 1 None None None 162451699 Common ppc hypothetical protein sce3427 121 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 162451785 Common yniI hypothetical protein sce3512 19 None None None 162457613 Common - Protein kinase sce9327 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449166 Nonpathogen amiB N-acetylmuramoyl-L-alanine amidase precursor sce0896 2 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 162456862 Common phaD pH adaption potassium efflux protein PhaD sce8579 206 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 162449127 Common - hypothetical protein with carboxy-terminal protease domain sce0857 150 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162456754 Common - hypothetical protein sce8471 5 None None None 162456988 Common sppA3 Signal peptide peptidase sce8704 186 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162453645 Common - putative Retinol dehydrogenase sce5369 229 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162453302 Common - hypothetical protein sce5026 51 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 162452490 Nonpathogen - hypothetical protein sce4214 1 None None None 162450872 Common fabH2 3-oxoacyl-(acyl-carrier-protein) synthase III sce2600 203 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162452667 Common apaG ApaG protein sce4391 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 162452652 Common - hypothetical protein sce4376 20 COG3615 TehB, Uncharacterized protein/domain, possibly involved in tellurite resistance Inorganic ion transport and metabolism 162454964 Common - hypothetical protein sce6682 79 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 162450688 Common - ECF-family RNA polymerase sigma factor sce2416 90 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162449153 Common wzy1 polysaccharide polymerase sce0883 6 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 162450266 Common - hypothetical protein sce1994 66 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 162451369 Nonpathogen - hypothetical protein sce3097 1 None None None 162452844 Nonpathogen - hypothetical protein sce4568 1 None None None 162455051 Common - selenium-binding protein sce6769 18 COG5276 COG5276, Uncharacterized conserved protein Function unknown 162457252 Nonpathogen - hypothetical protein sce8967 1 None None None 162452507 Nonpathogen - hypothetical protein sce4231 1 None None None 162451037 Nonpathogen - hypothetical protein sce2766 1 COG5240 SEC21, Vesicle coat complex COPI, gamma subunit Intracellular trafficking and secretion 162456488 Nonpathogen - hypothetical protein sce8205 1 None None None 162454105 Common - putative methyltransferase sce5829 72 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162455219 Common rpsF hypothetical protein sce6937 108 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 162455250 Common - oxidase-related protein sce6968 68 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 162450330 Nonpathogen - hypothetical protein sce2058 2 None None None 162451916 Nonpathogen - hypothetical protein sce3643 1 None None None 162455122 Common - Protein kinase sce6840 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457458 Common - ATP-dependent RNA helicase sce9172 43 COG1203 COG1203, Predicted helicases General function prediction only 162454043 Common hprK HPr kinase/phosphatase sce5767 59 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 162451042 Common pepA2 putative aminopeptidase sce2770 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 162448617 Common - hypothetical protein sce0347 127 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 162450050 Common - phosphoserine phosphatase sce1779 93 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162455202 Common - hypothetical protein sce6920 7 None None None 162455031 Common - putative ABC transporter permease protein sce6749 16 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 162450231 Nonpathogen - hypothetical protein sce1959 1 COG0392 COG0392, Predicted integral membrane protein Function unknown 162451968 Common - putative ABC transport system permease protein sce3695 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 162452589 Common - hypothetical protein sce4313 6 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451051 Common - mutT/nudix family protein sce2779 5 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 162456192 Common - Probable phosphoenolpyruvate synthase sce7909 149 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162453811 Nonpathogen - hypothetical protein sce5535 1 None None None 162456451 Common cinA competence-damage inducible protein CinA homolog sce8168 211 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 162456407 Nonpathogen - putative secreted protein sce8124 1 None None None 162452263 Common - putative isovaleryl-CoA dehydrogenase protein sce3990 117 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162456765 Nonpathogen - hypothetical protein sce8482 1 None None None 162450638 Nonpathogen - putative secreted protein sce2366 1 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 162456381 Common - hypothetical protein sce8098 47 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 162453234 Common - hypothetical protein sce4958 12 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 162453818 Nonpathogen - hypothetical protein sce5542 1 None None None 162451912 Common rlpA hypothetical protein sce3639 134 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 162449998 Nonpathogen - hypothetical protein sce1727 1 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455038 Nonpathogen - hypothetical protein sce6756 2 None None None 162448489 Nonpathogen - hypothetical protein sce0219 2 None None None 162451770 Common - Protein kinase sce3497 230 COG3899 COG3899, Predicted ATPase General function prediction only 162453857 Common - putative branched-chain amino acid ABC transporter, permease protein sce5581 160 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 162453843 Common - hypothetical protein sce5567 6 None None None 162452796 Common - hypothetical protein sce4520 23 None None None 162448636 Common - hypothetical protein sce0366 50 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 162450781 Common ptsN nitrogen regulatory IIA protein sce2509 17 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 162456979 Common - Protein kinase sce8695 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450660 Common ocd putative Ornithine cyclodeaminase sce2388 37 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 162453530 Nonpathogen - hypothetical protein sce5254 1 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 162454442 Nonpathogen - hypothetical protein sce6162 1 None None None 162456055 Common - Ribose operon repressor. sce7773 129 COG1609 PurR, Transcriptional regulators Transcription 162456377 Common - hypothetical protein sce8094 26 None None None 162457514 Common - Inositol monophosphatase family protein sce9228 177 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 162452152 Common mxcD hypothetical protein sce3879 220 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162455342 Common parA4 chromosome partitioning protein ParA sce7060 186 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162455622 Common ychF GTP-binding protein sce7340 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 162453537 Nonpathogen - putative secreted protein sce5261 3 COG4907 COG4907, Predicted membrane protein Function unknown 162453756 Common - ECF-family RNA polymerase sigma factor sce5481 4 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452800 Common - Cytochrome-c oxidase sce4524 162 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 162454362 Nonpathogen - hypothetical protein sce6085 1 None None None 162454994 Nonpathogen - putative exported protein with glycine-rich central and C-terminal region sce6712 2 None None None 162450068 Common - hypothetical protein sce1797 18 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 162452092 Common - hypothetical protein sce3819 18 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 162457399 Common - hypothetical protein sce9114 28 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162449578 Common - hypothetical protein sce1307 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 162451677 Common ytbE Prostaglandin-E sce3405 113 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 162450460 Common xysA Endo-1,4-beta-xylanase sce2188 33 COG3693 XynA, Beta-1,4-xylanase Carbohydrate transport and metabolism 162456867 Common - nitric oxide reductase sce8584 72 COG3256 NorB, Nitric oxide reductase large subunit Inorganic ion transport and metabolism 162450634 Common ssuE FMN reductase sce2362 31 COG0431 COG0431, Predicted flavoprotein General function prediction only 162455462 Nonpathogen - hypothetical protein sce7180 3 None None None 162448375 Common - hypothetical protein sce0105 51 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162448576 Nonpathogen - hypothetical protein sce0306 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162452754 Common - putative ABC transport system substrate-binding protein sce4478 85 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 162449369 Nonpathogen - hypothetical protein sce1099 1 None None None 162457491 Common - Protein kinase sce9205 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448744 Common - hypothetical protein sce0474 90 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162449475 Nonpathogen - hypothetical protein sce1205 1 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162450682 Nonpathogen - hypothetical protein sce2410 1 None None None 162456227 Common rplO 50S ribosomal protein L15 sce7944 212 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 162448449 Common msbA3 ABC transporter family carbohydrate exporter sce0179 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162453727 Nonpathogen - hypothetical protein sce5451 1 None None None 162454753 Common - glutaredoxin-like protein sce6471 161 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 162456062 Common - alpha-amylase family protein sce7780 155 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 162456252 Common - hypothetical protein sce7969 144 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162448512 Common - Oxidoreductase FAD-binding family protein sce0242 4 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 162450013 Common - hybrid histidine kinase sce1742 197 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162453258 Common - hypothetical protein sce4982 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 162448367 Common - predicted proline iminopeptidase sce0097 173 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162451298 Nonpathogen - hypothetical protein sce3026 1 None None None 162455268 Common - hypothetical protein sce6986 82 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 162456664 Nonpathogen - hypothetical protein sce8381 1 COG1913 COG1913, Predicted Zn-dependent proteases General function prediction only 162456804 Common purN putative Phosphoribosylglycinamide formyltransferase sce8521 220 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 162448662 Nonpathogen - hypothetical protein sce0392 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162454232 Common cpsB Protein-tyrosine-phosphatase sce5955 38 COG4464 CapC, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 162452611 Nonpathogen - hypothetical protein sce4335 1 None None None 162452133 Nonpathogen - hypothetical protein sce3860 1 None None None 162453406 Common - WD-repeat protein sce5130 40 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162454549 Common - hypothetical protein sce6269 27 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162456505 Common acpA hypothetical protein sce8222 10 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162455958 Common - putative DNA methylase sce7676 29 None None None 162457259 Common - hypothetical protein sce8974 4 None None None 162452531 Common oar2 Oar protein sce4255 29 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162451180 Common ftsY cell division membrane protein sce2908 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 162455709 Common - ABC1 family protein sce7427 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 162456350 Common - conserved repeat domain protein sce8067 15 None None None 162452777 Common - hypothetical protein sce4501 21 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162450037 Common glnE glutamate-ammonia-ligase adenylyltransferase sce1766 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 162451864 Common - Amino-acid acetyltransferase sce3591 18 COG0456 RimI, Acetyltransferases General function prediction only 162449017 Nonpathogen - hypothetical protein sce0747 2 None None None 162450839 Common - hypothetical protein sce2567 30 COG2006 COG2006, Uncharacterized conserved protein Function unknown 162456773 Nonpathogen - putative dehydrogenase/GMP reductase sce8490 1 None None None 162451501 Common - Protein kinase sce3229 132 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450899 Common - single-strand binding protein sce2627 6 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 162449064 Common - Protein kinase sce0794 219 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451610 Common xdh hypothetical protein sce3338 111 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 162456620 Nonpathogen - hypothetical protein sce8337 1 None None None 162452624 Common - sodium/hydrogen exchanger family protein sce4348 27 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 162455968 Common - Putative ATP/GTP binding protein sce7686 28 None None None 162451800 Common - hypothetical protein sce3527 30 COG3526 COG3526, Uncharacterized protein conserved in bacteria Posttranslational modification, protein turnover, chaperones 162452436 Common - Transcriptional regulator sce4161 177 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454476 Common gcvT2 Aminomethyltransferase sce6196 36 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 162448591 Common - hypothetical protein sce0321 220 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 162453876 Common - TROVE domain hypothetical protein sce5600 10 None None None 162450368 Nonpathogen - hypothetical protein sce2096 6 None None None 162454211 Common maf Maf-like protein sce5934 189 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 162457652 Common - hypothetical protein sce9366 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 162454277 Common gatA5 amidase family protein sce6000 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162456708 Nonpathogen - putative secreted protein sce8425 1 None None None 162448439 Common - putative peptidase sce0169 153 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162454349 Nonpathogen - hypothetical protein sce6072 1 None None None 162448795 Common nuoD1 NADH dehydrogenase (ubiquinone) sce0525 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 162449274 Common - hypothetical protein sce1004 174 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162456020 Common - conserved hypothetical protein with TAT signal sequence sce7738 7 None None None 162452400 Nonpathogen - hypothetical protein sce4124 1 None None None 162452942 Nonpathogen - hypothetical protein sce4666 1 None None None 162449864 Common - Response regulator. CheY homologue sce1593 223 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 162449898 Common - RND family efflux transporter sce1627 172 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162450396 Common - hypothetical protein sce2124 9 None None None 162455626 Common - NDP-sugar aminotransferase sce7344 191 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 162452896 Nonpathogen - hypothetical protein sce4620 1 None None None 162450894 Common huyA1 N-methylhydantoinase A, beta subunit sce2622 113 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162456463 Common hpt Hypoxanthine-phosphoribosyltransferase sce8180 142 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 162457075 Common - hypothetical protein sce8789 32 None None None 162455528 Common rpmI 50S ribosomal protein L35 sce7246 37 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 162455713 Common - FHA domain protein sce7431 15 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162448352 Nonpathogen - hypothetical protein sce0083 1 None None None 162457356 Nonpathogen - hypothetical protein sce9071 1 None None None 162448311 Common - Protein kinase sce0042 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453498 Common - hypothetical protein sce5222 40 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162452040 Nonpathogen - hypothetical protein sce3767 2 None None None 162455573 Nonpathogen - hypothetical protein sce7291 1 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 162449393 Common - transcriptional regulator, LysR family sce1123 104 COG0583 LysR, Transcriptional regulator Transcription 162455071 Nonpathogen - hypothetical protein sce6789 1 None None None 162455162 Common rpsA2 30S ribosomal protein S1 sce6880 218 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 162455678 Common - Protein kinase sce7396 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455330 Common priA primosomal protein N' sce7048 211 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 162453375 Nonpathogen - hypothetical protein sce5099 1 None None None 162452502 Nonpathogen - hypothetical protein sce4226 5 None None None 162452697 Common - putative ABC-2 type transport system ATP-binding protein sce4421 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162449135 Common - hypothetical protein sce0865 89 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162454714 Common leuB2 3-isopropylmalate dehydrogenase sce6432 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 162448754 Nonpathogen - hypothetical protein sce0484 1 None None None 162451121 Common - outer membrane efflux protein sce2849 19 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162454472 Common - hypothetical protein sce6192 65 COG3246 COG3246, Uncharacterized conserved protein Function unknown 162455080 Common - anti-anti sigma factor protein sce6798 39 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454568 Nonpathogen - hypothetical protein sce6288 1 None None None 162451977 Common - two-component hybrid sensor and regulator sce3704 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453451 Common - Amidohydrolase sce5175 33 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162456970 Nonpathogen - hypothetical protein sce8686 3 None None None 162449986 Common - integral membrane protease sce1715 37 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 162448997 Nonpathogen - hypothetical protein sce0727 1 None None None 162456126 Common - 3-demethylubiquinone-9 3-O-methyltransferase sce7843 12 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162451936 Nonpathogen - hypothetical protein sce3663 5 None None None 162451129 Common - mandelate racemase/muconate lactonizing enzyme family protein sce2857 108 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 162454029 Common cysK5 hypothetical protein sce5753 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162452376 Common - probable secreted esterase sce4100 25 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162449698 Nonpathogen - hypothetical protein sce1427 1 None None None 162448382 Nonpathogen - hypothetical protein sce0112 1 None None None 162448544 Nonpathogen - hypothetical protein sce0274 1 None None None 162454825 Common - protein phosphatase 2C domain sce6543 117 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162457509 Common - putative hydrolase sce9223 57 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162448502 Nonpathogen - hypothetical protein sce0232 1 None None None 162455469 Common fpr Ferredoxin--NADP(+) reductase sce7188 84 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 162454893 Common - hypothetical protein sce6611 27 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162457054 Nonpathogen - hypothetical protein sce8769 1 None None None 162449078 Common - hypothetical protein sce0808 5 COG4124 ManB, Beta-mannanase Carbohydrate transport and metabolism 162450316 Common ltaA hypothetical protein sce2044 115 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 162450956 Common - hypothetical protein sce2684 100 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 162452384 Common - hypothetical protein sce4108 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162448881 Common crtI2 putative Phytoene dehydrogenase sce0611 87 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162454161 Nonpathogen - hypothetical protein sce5885 2 None None None 162457638 Nonpathogen - hypothetical protein sce9352 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 162449427 Common - hypothetical protein sce1157 138 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162456713 Common - Protein kinase sce8430 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457425 Nonpathogen - hypothetical protein sce9139 3 None None None 162452893 Nonpathogen - hypothetical protein sce4617 1 None None None 162450853 Common - putative ATPase sce2581 150 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 162453745 Common - Sigma-54 dependent transcriptional regulator sce5469 182 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162456002 Common - hypothetical protein sce7720 4 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 162450881 Common fabG6 3-oxoacyl-[acyl-carrier-protein] reductase sce2609 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162455976 Nonpathogen - hypothetical protein sce7694 1 None None None 162452978 Common napA Nitrate reductase sce4702 185 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 162457606 Common - hypothetical protein sce9320 76 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 162448396 Nonpathogen - hypothetical protein sce0126 1 COG5373 COG5373, Predicted membrane protein Function unknown 162449138 Common - hypothetical protein sce0868 22 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 162455223 Common dnaB hypothetical protein sce6941 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 162456777 Common nirB2 nitrite reductase sce8494 204 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 162449984 Nonpathogen - hypothetical protein sce1713 1 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 162454155 Nonpathogen - hypothetical protein sce5879 1 None None None 162453784 Common - ECF-family RNA polymerase sigma factor sce5508 3 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452428 Common - transcriptional regulator lacI family sce4152 126 COG1609 PurR, Transcriptional regulators Transcription 162452393 Nonpathogen - hypothetical protein sce4117 1 None None None 162450869 Common - hypothetical protein sce2597 8 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 162452485 Nonpathogen - hypothetical protein sce4209 2 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 162449313 Common - Protein kinase sce1043 137 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450004 Common - HTH-type transcriptional regulator acrR sce1733 26 COG1309 AcrR, Transcriptional regulator Transcription 162454325 Nonpathogen - hypothetical protein sce6048 1 None None None 162457363 Nonpathogen - hypothetical protein sce9078 1 None None None 162454017 Nonpathogen - hypothetical protein sce5741 1 None None None 162452927 Nonpathogen - hypothetical protein sce4651 1 None None None 162448610 Nonpathogen - hypothetical protein sce0340 1 None None None 162450429 Nonpathogen - hypothetical protein sce2157 1 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162455258 Nonpathogen - hypothetical protein sce6976 4 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 162454808 Common - hypothetical protein sce6526 8 None None None 162453152 Common - hypothetical protein sce4876 5 None None None 162454432 Common - histidine kinase sce6152 32 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162456839 Common - hypothetical protein sce8556 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454392 Common - hypothetical protein sce6113 24 COG2311 COG2311, Predicted membrane protein Function unknown 162453400 Common alaS hypothetical protein sce5124 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162451546 Nonpathogen - hypothetical protein sce3274 1 None None None 162455671 Common - universal stress protein sce7389 146 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162451838 Common - hypothetical protein sce3565 25 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162449071 Common cheA1 chemotaxis protein cheA sce0801 153 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162457262 Common - hypothetical protein sce8977 66 COG1718 RIO1, Serine/threonine protein kinase involved in cell cycle control Signal transduction mechanisms / Cell division and chromosome partitioning 162449891 Nonpathogen - hypothetical protein sce1620 1 None None None 162450918 Common - Oxidoreductase sce2646 116 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 162448321 Nonpathogen - Putative secreted protein sce0052 1 None None None 162450628 Nonpathogen - hypothetical protein sce2356 1 None None None 162450422 Nonpathogen - hypothetical protein sce2150 1 None None None 162457625 Common - hypothetical protein sce9339 15 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 162455471 Nonpathogen - putative exported alanine/arginine/valine-rich protein sce7189 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162453049 Nonpathogen - hypothetical protein sce4773 1 None None None 162450939 Common - hypothetical protein sce2667 8 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 162448652 Common - hypothetical protein sce0382 10 COG3668 ParE, Plasmid stabilization system protein General function prediction only 162456899 Nonpathogen - hypothetical protein sce8616 1 None None None 162453582 Common ompA2 probable outer membrane protein sce5306 170 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452012 Common surE2 5'-nucleotidase, cytosolic II sce3739 6 None None None 162452244 Common - putative secreted protein sce3971 3 None None None 162449775 Common - Protein kinase sce1504 139 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456069 Nonpathogen - hypothetical protein sce7787 1 None None None 162450689 Nonpathogen - hypothetical protein sce2417 1 None None None 162455314 Nonpathogen - hypothetical protein sce7032 1 None None None 162452147 Common - hypothetical protein sce3874 148 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 162448399 Nonpathogen - hypothetical protein sce0129 4 None None None 162456372 Nonpathogen - hypothetical protein sce8089 1 None None None 162449799 Common gcd glucose 1-dehydrogenase sce1528 140 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162452511 Common mocA oxidoreductase sce4235 202 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162453569 Common - hypothetical protein sce5293 7 COG4938 COG4938, Uncharacterized conserved protein Function unknown 162453321 Common - hypothetical protein sce5045 8 None None None 162456911 Common hemE putative Uroporphyrinogen decarboxylase sce8628 177 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 162449520 Common - Predicted metallopeptidase sce1250 63 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 162450226 Common - hypothetical protein sce1954 114 COG1690 RtcB, Uncharacterized conserved protein Function unknown 162449732 Common - 3-demethylubiquinone-9 3-methyltransferase sce1461 9 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162451743 Common lip Triacylglycerol lipase sce3470 31 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 162450263 Common - Glutaryl-CoA dehydrogenase sce1991 154 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162449693 Common - probable multidrug efflux membrane protein sce1422 179 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 162457309 Nonpathogen - hypothetical protein sce9024 1 None None None 162457292 Common - Putative NAD synthetase sce9007 174 COG0171 NadE, NAD synthase Coenzyme metabolism 162453897 Common - hypothetical protein sce5621 13 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162448480 Common cbiP Adenosylcobyric acid synthase (glutamine-hydrolyzing) sce0210 150 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 162452420 Nonpathogen - hypothetical protein sce4144 1 None None None 162456739 Nonpathogen - hypothetical protein sce8456 1 None None None 162449833 Common - Glycosyl hydrolase sce1562 68 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 162455499 Common - hypothetical protein sce7217 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162455296 Common - hypothetical protein sce7014 24 COG3247 HdeD, Uncharacterized conserved protein Function unknown 162452774 Common - metalloprotease sce4498 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 162450061 Nonpathogen - hypothetical protein sce1790 1 None None None 162450708 Common pdp Pyrimidine-nucleoside phosphorylase sce2436 136 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 162453474 Common - hypothetical protein sce5198 164 COG1609 PurR, Transcriptional regulators Transcription 162452880 Common - hypothetical protein sce4604 6 COG4099 COG4099, Predicted peptidase General function prediction only 162456476 Nonpathogen - hypothetical protein sce8193 3 None None None 162448309 Nonpathogen - hypothetical protein sce0040 1 None None None 162454542 Common - hypothetical protein sce6262 15 None None None 162448313 Common speB1 Agmatinase sce0044 142 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 162452181 Common - probable Methyltransferase sce3908 29 COG4798 COG4798, Predicted methyltransferase General function prediction only 162455607 Common - putative methyltransferase sce7325 65 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 162449338 Common - hypothetical protein sce1068 24 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 162451067 Nonpathogen - hypothetical protein sce2795 2 None None None 162452224 Common - hypothetical protein sce3951 12 COG3000 ERG3, Sterol desaturase Lipid metabolism 162452268 Nonpathogen - hypothetical protein sce3995 1 None None None 162448519 Common cbiM cobalamin biosynthesis integral membrane protein CbiM sce0249 89 COG0310 CbiM, ABC-type Co2+ transport system, permease component Inorganic ion transport and metabolism 162449257 Common - hypothetical protein sce0987 26 None None None 162456259 Common yggV putative ribosomal protein sce7976 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 162456795 Nonpathogen - hypothetical protein sce8512 3 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162457470 Nonpathogen - hypothetical protein sce9184 1 None None None 162453024 Nonpathogen - hypothetical protein sce4748 6 None None None 162453850 Common - Protein kinase sce5574 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454198 Nonpathogen - putative secreted protein sce5921 1 None None None 162454054 Common - putative secreted protein sce5778 2 None None None 162449482 Common - hypothetical protein sce1212 23 COG5485 COG5485, Predicted ester cyclase General function prediction only 162453707 Common - two-component system response regulator sce5431 213 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 162456732 Nonpathogen - hypothetical protein sce8449 1 None None None 162450045 Common - hypothetical protein sce1774 120 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 162453619 Nonpathogen - hypothetical protein sce5343 2 None None None 162449780 Nonpathogen - hypothetical protein sce1509 5 None None None 162456799 Common - hypothetical protein sce8516 8 COG5297 CelA, Cellobiohydrolase A (1,4-beta-cellobiosidase A) Carbohydrate transport and metabolism 162457000 Nonpathogen - putative secreted protein sce8716 1 None None None 162450401 Common - transcriptional regulator, MerR family sce2129 18 COG0789 SoxR, Predicted transcriptional regulators Transcription 162452582 Common - hypothetical protein sce4306 176 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162457224 Common rmlB3 dTDP-glucose 4,6-dehydratase sce8939 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452734 Common - hypothetical protein sce4458 20 None None None 162452767 Nonpathogen rfbD UDP-galactopyranose mutase sce4491 5 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 162456743 Common - hypothetical protein sce8460 151 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162449721 Common - hypothetical protein sce1450 37 COG2267 PldB, Lysophospholipase Lipid metabolism 162453198 Nonpathogen - hypothetical secreted protein sce4922 1 None None None 162455063 Common - transcriptional regulator, TetR family sce6781 136 COG1309 AcrR, Transcriptional regulator Transcription 162448774 Nonpathogen - hypothetical protein sce0504 1 COG5373 COG5373, Predicted membrane protein Function unknown 162451881 Nonpathogen - UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase sce3608 6 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162448588 Common - hypothetical protein sce0318 11 None None None 162456533 Common - putative secreted protein sce8250 4 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162449846 Nonpathogen - hypothetical protein sce1575 1 None None None 162451279 Common pckA1 hypothetical protein sce3007 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 162454380 Common - transposase sce6103 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162450801 Common cfa1 cyclopropane-fatty-acyl-phospholipid synthase sce2529 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 162455702 Common - hypothetical protein sce7420 4 COG3014 COG3014, Uncharacterized protein conserved in bacteria Function unknown 162456565 Common - Protein kinase sce8282 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449093 Nonpathogen - hypothetical protein sce0823 5 None None None 162450794 Common - putative ribonuclease P protein component sce2522 10 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 162456538 Common - non-ribosomal peptide synthetase sce8255 210 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162455870 Common - hypothetical protein sce7588 26 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 162448538 Nonpathogen - hypothetical protein sce0268 4 None None None 162449467 Nonpathogen - hypothetical protein sce1197 2 None None None 162453311 Nonpathogen - hypothetical protein sce5035 1 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162454399 Common - hypothetical protein sce6120 3 None None None 162457276 Common - hypothetical protein sce8991 158 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 162449547 Common - hypothetical protein sce1276 11 None None None 162453270 Common - hypothetical protein sce4994 30 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 162453002 Nonpathogen - hypothetical protein sce4726 2 None None None 162450118 Common - BNR repeat domain protein sce1847 41 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162452791 Common - hypothetical protein sce4514 97 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162453082 Common cypA3 Cytochrome P450 CYP260B1 sce4806 77 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162453956 Nonpathogen - Putative hydrolase of the HD superfamily sce5680 16 COG1353 COG1353, Predicted hydrolase of the HD superfamily (permuted catalytic motifs) General function prediction only 162455451 Common malQ4 4-alpha-glucanotransferase sce7169 44 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 162448821 Common - hypothetical protein with NHL repeat sce0551 31 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162452523 Common bioB Biotin synthase sce4247 183 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 162451321 Nonpathogen - putative secreted protein sce3049 2 None None None 162453679 Common - putative polyvinylalcohol dehydrogenase sce5403 73 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162457299 Common purD hypothetical protein sce9014 234 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 162455492 Common glnA2 Glutamate--ammonia ligase sce7210 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 162455234 Common - Protein kinase sce6952 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454837 Common sdhB1 Succinate dehydrogenase sce6555 58 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 162453059 Common yfbE putative enzyme sce4783 196 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 162453698 Nonpathogen - hypothetical protein sce5422 1 None None None 162453526 Nonpathogen - Putative DnaJ molecular chaperone sce5250 2 COG1107 COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain DNA replication, recombination, and repair 162454262 Common - hypothetical protein sce5984 79 COG1801 COG1801, Uncharacterized conserved protein Function unknown 162456830 Common - hypothetical protein sce8547 21 None None None 162454640 Common - hypothetical protein sce6360 31 COG4677 PemB, Pectin methylesterase Carbohydrate transport and metabolism 162449099 Nonpathogen - hypothetical protein sce0829 1 None None None 162450482 Common - putative pyrazinamidase/nicotinamidase sce2210 87 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162451851 Common - hypothetical protein sce3579 16 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 162454525 Nonpathogen - hypothetical protein sce6245 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162455944 Nonpathogen - hypothetical protein sce7662 1 None None None 162453149 Nonpathogen - hypothetical protein sce4873 1 None None None 162456630 Common - hypothetical protein sce8347 140 COG1741 COG1741, Pirin-related protein General function prediction only 162456890 Nonpathogen - hypothetical protein sce8607 1 None None None 162450948 Common - Protein kinase sce2676 216 COG3899 COG3899, Predicted ATPase General function prediction only 162451858 Common - hypothetical protein sce3585 3 None None None 162454875 Common - Putative adenylate cyclase regulatory protein sce6593 8 COG4907 COG4907, Predicted membrane protein Function unknown 162451333 Nonpathogen - hypothetical protein sce3061 1 None None None 162448629 Common - Protein kinase sce0359 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451078 Nonpathogen - hypothetical protein sce2806 1 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 162449103 Common - hypothetical protein sce0833 4 None None None 162448982 Common - transcriptional regulator, ArsR family sce0712 45 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 162457386 Common - transposase sce9101 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162451875 Nonpathogen - hypothetical protein sce3602 1 None None None 162451690 Nonpathogen - hypothetical protein sce3418 4 None None None 162449939 Common ftsZ cell division protein FtsZ sce1668 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 162449568 Nonpathogen - hypothetical protein sce1297 2 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 162456165 Common - conserved carbohydrate-binding protein, Rhs family sce7882 73 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162455696 Common def2 polypeptide deformylase sce7414 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 162450408 Common - putative Conserved membrane protein sce2136 8 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 162450212 Common - putative periplasmic substrate-binding protein sce1940 112 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162451142 Common - Fumarylacetoacetase sce2870 180 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 162453121 Common hom hypothetical protein sce4845 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 162457094 Common - ABC transporter ATP-binding protein sce8809 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162450601 Common - CBS domain protein sce2329 142 COG0517 COG0517, FOG: CBS domain General function prediction only 162448801 Common - hypothetical protein sce0531 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162457329 Common - inorganic pyrophosphatase, putative sce9044 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 162456123 Nonpathogen - metal ion efflux outer membrane protein family protein, putative sce7840 1 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162451653 Common - hypothetical protein sce3381 13 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162451834 Nonpathogen - PE-PGRS family protein sce3561 1 None None None 162448830 Common ygcH hypothetical protein sce0560 26 None None None 162456411 Nonpathogen - hypothetical protein sce8128 1 None None None 162454537 Common - Protein kinase sce6257 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454609 Common - putative aldehyde dehydrogenase sce6329 78 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 162454791 Nonpathogen - hypothetical protein sce6509 1 None None None 162453609 Common - hypothetical protein sce5333 18 COG4864 COG4864, Uncharacterized protein conserved in bacteria Function unknown 162456000 Common mgpS ATP-dependent helicase sce7718 67 COG4581 COG4581, Superfamily II RNA helicase DNA replication, recombination, and repair 162453920 Common msbA7 ABC transporter family carbohydrate exporter sce5644 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162453548 Common - probable proline iminopeptidase sce5272 101 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162457233 Common - hypothetical protein sce8948 4 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 162450354 Nonpathogen - hypothetical protein sce2082 20 None None None 162457527 Nonpathogen - hypothetical protein sce9241 2 None None None 162451719 Common oppA1 periplasmic oligopeptide-binding protein precursor sce3446 189 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 162453927 Nonpathogen - hypothetical protein sce5651 1 None None None 162449789 Nonpathogen - ECF-family RNA polymerase sigma factor sce1518 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454863 Common - hypothetical protein sce6581 4 COG5373 COG5373, Predicted membrane protein Function unknown 162449415 Nonpathogen - hypothetical protein sce1145 4 None None None 162452217 Common - Protein kinase sce3944 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450983 Common - putative SAM-dependent methyltransferase sce2711 206 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162453719 Common - Protein kinase sce5443 229 COG3899 COG3899, Predicted ATPase General function prediction only 162453755 Nonpathogen - hypothetical protein sce5479 1 None None None 162452964 Nonpathogen - hypothetical protein sce4688 3 None None None 162451766 Common - Protein kinase sce3493 152 COG3899 COG3899, Predicted ATPase General function prediction only 162450250 Common - putative peptidase sce1978 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162450701 Common - hypothetical protein sce2429 11 None None None 162452659 Common - hypothetical protein sce4383 21 COG3823 COG3823, Glutamine cyclotransferase Posttranslational modification, protein turnover, chaperones 162450553 Common - transposase sce2281 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162452518 Common thiG Thiamine biosynthesis protein sce4242 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 162450496 Common - NDP-sugar oxidoreductase sce2224 68 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452338 Common - hypothetical protein sce4063 48 COG3378 COG3378, Predicted ATPase General function prediction only 162451498 Common - transcriptional regulator, LysR family sce3226 169 COG0583 LysR, Transcriptional regulator Transcription 162456209 Nonpathogen - hypothetical protein sce7926 3 None None None 162456103 Common - positive regulator of sigma-B sce7821 53 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455390 Nonpathogen - hypothetical protein sce7108 1 None None None 162451195 Common - Protein kinase sce2923 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451445 Common rpsA1 S1 RNA binding domain protein sce3173 81 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 162452890 Common - Protein kinase sce4614 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449008 Common - cupin-like protein sce0738 4 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 162456247 Nonpathogen - hypothetical protein sce7964 1 None None None 162448659 Common - putative homoserine kinase sce0389 60 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 162454113 Nonpathogen - hypothetical protein sce5837 10 None None None 162455368 Nonpathogen - hypothetical protein sce7086 1 None None None 162449001 Common - hypothetical protein sce0731 88 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162450616 Common - Peptide chain release factor sce2344 108 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 162451984 Common - putative Isochorismatase hydrolase sce3711 22 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162448922 Common tolB tolB protein sce0652 58 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162453205 Nonpathogen - hypothetical protein sce4929 1 None None None 162456334 Common - Response regulator receiver domain sce8051 138 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 162454255 Common - Putative glutathione-S-transferase sce5978 54 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162451402 Common - putative secreted protein sce3130 5 None None None 162453078 Nonpathogen - hypothetical protein sce4802 1 None None None 162453111 Common - Radical SAM superfamily protein sce4835 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 162454580 Nonpathogen - hypothetical protein sce6300 1 None None None 162455927 Nonpathogen - hypothetical protein sce7645 11 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 162455617 Nonpathogen - hypothetical protein sce7335 1 None None None 162450624 Common - hypothetical protein sce2352 143 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162450773 Nonpathogen - putative secreted protein sce2501 1 None None None 162448276 Common fur ferric uptake regulation protein sce0007 197 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 162455388 Common - metallo-beta-lactamase family protein sce7106 156 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162456877 Nonpathogen - hypothetical protein sce8594 1 None None None 162452361 Nonpathogen - hypothetical protein sce4085 1 None None None 162457566 Nonpathogen - hypothetical protein sce9280 1 None None None 162448700 Nonpathogen - hypothetical protein sce0430 5 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 162450652 Common - putative transcriptional regulator sce2380 132 COG1733 COG1733, Predicted transcriptional regulators Transcription 162456314 Nonpathogen - hypothetical protein sce8031 1 None None None 162449741 Common - MATE efflux family protein sce1470 168 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162453487 Common - hypothetical protein sce5211 7 None None None 162452641 Common - Hybrid Histidine Kinase sce4365 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450534 Common hisC1 Histidinol-phosphate aminotransferase sce2262 223 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 162456553 Nonpathogen - hypothetical protein sce8270 1 None None None 162453519 Common - hypothetical protein sce5243 30 COG3287 COG3287, Uncharacterized conserved protein Function unknown 162453912 Common - Protein kinase sce5636 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454004 Nonpathogen ygcM1 6-pyruvoyltetrahydropterin synthase sce5728 11 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 162457573 Common - mechanosensitve ion channel sce9287 203 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162453117 Common - two-component response regulator sce4841 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162455634 Common - glycosyltransferase sce7352 170 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162457134 Common - probable oxidoreductase sce8849 184 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162455816 Nonpathogen - hypothetical protein sce7534 1 None None None 162456780 Nonpathogen - Putative PE-PGRS family protein sce8497 2 COG5281 COG5281, Phage-related minor tail protein Function unknown 162453975 Common - transposase, IS91 family, putative sce5699 29 None None None 162452671 Common - hypothetical protein sce4395 58 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 162448709 Common - transcriptional regulator sce0439 176 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162452783 Common - RNA polymerase sigma factor sce4507 74 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450904 Nonpathogen - Calcineurin-like phosphoesterase family protein sce2632 10 None None None 162452456 Nonpathogen - hypothetical protein sce4180 1 None None None 162455723 Nonpathogen - putative periplasmic substrate-binding protein sce7441 20 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 162448622 Common - hypothetical protein sce0352 24 None None None 162451514 Common - hypothetical protein sce3242 68 None None None 162456611 Nonpathogen - hypothetical protein sce8328 3 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162452206 Nonpathogen - hypothetical protein sce3933 1 None None None 162456073 Nonpathogen - transcriptional regulator, MarR family sce7791 2 COG1846 MarR, Transcriptional regulators Transcription 162455107 Common - Protein kinase sce6825 152 COG3899 COG3899, Predicted ATPase General function prediction only 162453040 Common - hypothetical protein sce4764 12 None None None 162454411 Nonpathogen - hypothetical protein sce6132 1 None None None 162456763 Common - hypothetical protein sce8480 34 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162454610 Nonpathogen - hypothetical protein sce6330 1 None None None 162456316 Nonpathogen - hypothetical protein sce8033 1 None None None 162449149 Common wzc1 protein kinase involved in polysaccharide biosynthesis sce0879 15 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 162454948 Common - Protein kinase sce6666 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452514 Common thiE2 Thiamine-phosphate diphosphorylase sce4238 65 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 162449340 Nonpathogen - hypothetical protein sce1070 1 None None None 162453126 Common - hypothetical protein sce4850 7 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 162455092 Common ygcM2 6-pyruvoyltetrahydropterin synthase sce6810 32 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 162451060 Nonpathogen - hypothetical protein sce2788 1 None None None 162451741 Nonpathogen - putative secreted protein sce3468 3 None None None 162452960 Nonpathogen - hypothetical protein sce4684 7 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162457320 Common - Sigma-54 dependent transcriptional regulator sce9035 171 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162450724 Nonpathogen - hypothetical protein sce2452 1 None None None 162452464 Nonpathogen - hypothetical protein sce4188 1 None None None 162455448 Common - DNA repair exonuclease family protein sce7166 50 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 162451617 Nonpathogen - hypothetical protein sce3345 1 None None None 162454614 Common - hypothetical protein sce6334 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 162451569 Nonpathogen - iduronate-2-sulfatase sce3297 4 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162457418 Nonpathogen - hypothetical protein sce9132 1 None None None 162450417 Nonpathogen - hypothetical protein sce2145 3 None None None 162452232 Nonpathogen - hypothetical protein sce3959 1 None None None 162455891 Common nuoN2 NADH dehydrogenase I chain N sce7609 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 162455664 Nonpathogen - hypothetical protein sce7382 1 None None None 162454665 Common - putative neutral zinc metalloprotease sce6385 19 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 162451711 Common - hypothetical protein sce3439 5 None None None 162452703 Common xerD site-specific recombinase sce4427 228 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162449569 Nonpathogen - hypothetical protein sce1298 4 None None None 162454091 Common - Histidine protein kinase sce5815 199 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454096 Nonpathogen - hypothetical protein sce5820 1 None None None 162457118 Common - ABC transporter, ATP-binding protein sce8833 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162450820 Nonpathogen - hypothetical protein sce2548 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 162451548 Common - Esterase/lipase/thioesterase family protein sce3276 25 COG4099 COG4099, Predicted peptidase General function prediction only 162457010 Common aceA hypothetical protein sce8726 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 162448657 Common - hypothetical protein sce0387 54 COG1159 Era, GTPase General function prediction only 162449052 Common btuB putative outer membrane receptor for transport of vitamin B12 sce0782 33 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162452171 Common - hypothetical protein sce3898 193 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 162457381 Nonpathogen - hypothetical protein sce9096 1 None None None 162448970 Common deaD1 ATP-independent RNA helicase sce0700 234 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 162449105 Common panC putative Pantoate--beta-alanine ligase sce0835 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 162457297 Common - FHA domain protein sce9012 51 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162448687 Common - putative membrane bound zinc metallopeptidase sce0417 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 162455545 Nonpathogen - putative secreted protein sce7263 1 COG4907 COG4907, Predicted membrane protein Function unknown 162451391 Common - hypothetical protein sce3119 7 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 162453347 Common tolQ3 tolQ protein sce5071 151 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 162448672 Common tufA1 Elongation factor (EF) sce0402 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 162450052 Nonpathogen - hypothetical protein sce1781 1 None None None 162456672 Common - hypothetical protein sce8389 5 None None None 162449504 Nonpathogen - hypothetical protein sce1234 1 None None None 162455514 Nonpathogen - hypothetical protein sce7232 3 None None None 162450315 Nonpathogen - putative secreted protein sce2043 1 None None None 162454871 Nonpathogen - hypothetical protein sce6589 1 None None None 162454088 Nonpathogen - hypothetical protein sce5812 1 None None None 162453282 Common - putative Aldehyde dehydrogenase (NAD(+)) sce5006 65 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162457530 Nonpathogen - hypothetical protein sce9244 1 None None None 162451796 Common - hypothetical protein sce3523 73 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 162453572 Nonpathogen - hypothetical protein sce5296 1 None None None 162453769 Nonpathogen - hypothetical protein sce5493 1 None None None 162452657 Nonpathogen - hypothetical protein sce4381 6 None None None 162450334 Nonpathogen - hypothetical protein sce2062 1 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162451792 Common - putative secreted protein sce3519 8 None None None 162457019 Common - ECF-family RNA polymerase sigma factor sce8734 150 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453340 Nonpathogen - putative GRAS-like transcription factor sce5064 1 None None None 162448984 Nonpathogen - hypothetical protein sce0714 1 COG4907 COG4907, Predicted membrane protein Function unknown 162451258 Nonpathogen - hypothetical protein sce2986 1 COG5373 COG5373, Predicted membrane protein Function unknown 162452913 Nonpathogen - hypothetical protein sce4637 1 None None None 162455594 Common metK Methionine adenosyltransferase sce7312 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 162456673 Nonpathogen - hypothetical protein sce8390 2 None None None 162454128 Common - putative dnaJ protein sce5852 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162455597 Nonpathogen waaL lipopolysaccharide lipooligosaccharide O-antigen ligase sce7315 2 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162453013 Nonpathogen - hypothetical protein sce4737 1 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453507 Nonpathogen - hypothetical protein sce5231 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162452094 Common pyrR putative Pyrimidine operon attenuation protein / Uracil phosphoribosyltransferase sce3821 109 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 162448663 Common - putative siroheme synthase sce0393 112 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 162450961 Common - putative SAM-dependent methyltransferase sce2689 30 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162456413 Common - selenocysteine lyase / isopenicillin N epimerase sce8130 138 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162450281 Nonpathogen - hypothetical protein sce2009 1 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 162448972 Common - dipeptidase sce0702 100 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 162449190 Nonpathogen - hypothetical protein sce0920 1 None None None 162456427 Common - hypothetical protein sce8144 11 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162456523 Common rbsB2 Ribose transporter, periplasmic binding protein sce8240 74 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162448303 Nonpathogen - hypothetical protein sce0034 1 None None None 162455824 Nonpathogen - hypothetical protein sce7542 2 None None None 162450388 Nonpathogen - hypothetical protein sce2116 1 None None None 162451588 Common - hypothetical protein sce3316 7 None None None 162449958 Common - Protein of unknown function DUF262 sce1687 42 COG1479 COG1479, Uncharacterized conserved protein Function unknown 162454853 Nonpathogen - hypothetical protein sce6571 1 None None None 162455778 Nonpathogen - hypothetical protein sce7496 1 None None None 162451735 Nonpathogen - hypothetical protein sce3462 1 None None None 162452333 Common - hypothetical protein sce4059 21 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162457548 Common - hypothetical protein sce9262 3 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 162449965 Nonpathogen - hypothetical protein sce1694 1 None None None 162454493 Common - DUF323 hypothetical protein sce6213 98 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454284 Common - Putative mannanase sce6007 12 COG3934 COG3934, Endo-beta-mannanase Carbohydrate transport and metabolism 162455009 Common - hypothetical protein sce6727 16 None None None 162452847 Common phnX Cytochrome-c3 hydrogenase sce4571 31 None None None 162452208 Common - A/G-specific adenine glycosylase sce3935 226 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 162449882 Nonpathogen - hypothetical protein sce1611 4 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162453790 Nonpathogen - hypothetical protein sce5514 1 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162455018 Nonpathogen - hypothetical protein sce6736 3 None None None 162453202 Nonpathogen - transposase sce4926 2 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455217 Common rplY 50S ribosomal protein L25 sce6935 190 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 162454933 Common - transposase sce6651 75 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162449603 Nonpathogen - lysyl oxidase-like sce1332 5 None None None 162450941 Nonpathogen - hypothetical protein sce2669 1 None None None 162452536 Common - glycerol-3-phosphate acyltransferase sce4260 33 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162455646 Nonpathogen - transposase sce7364 2 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162448606 Common ccpR cytochrome c551 peroxidase precursor sce0336 93 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162452529 Common tolQ2 TolQ protein sce4253 154 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 162455277 Common - hypothetical protein sce6995 36 None None None 162450134 Common - putative ABC-type permease protein sce1863 155 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162449429 Common - hypothetical protein sce1159 3 None None None 162453824 Nonpathogen - hypothetical protein sce5548 1 None None None 162454223 Nonpathogen - hypothetical protein sce5946 2 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162450968 Nonpathogen - hypothetical protein sce2696 1 None None None 162452997 Common pucI putative Allantoin permease sce4721 65 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 162452990 Nonpathogen - hypothetical protein sce4714 1 None None None 162449412 Common - hypothetical protein sce1142 4 None None None 162455319 Common pcaH Protocatechuate 3,4-dioxygenase sce7037 36 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 162456008 Common - hypothetical protein sce7726 13 None None None 162456140 Nonpathogen - Protein with nucleic acid binding motif sce7857 1 None None None 162456299 Nonpathogen - hypothetical protein sce8016 1 None None None 162448699 Common - two-component response regulator sce0429 196 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162451328 Common - put. Multiple sugar ABC transporter ATP-binding protein sce3056 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 162452163 Common mxcK efflux pump sce3890 36 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162449499 Nonpathogen - hypothetical protein sce1229 1 None None None 162454772 Nonpathogen - hypothetical protein sce6490 1 None None None 162455744 Nonpathogen - hypothetical protein sce7462 1 None None None 162453136 Common - hypothetical protein sce4860 5 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162452493 Nonpathogen - putative secreted protein sce4217 2 None None None 162455814 Common - hypothetical protein sce7532 39 COG4637 COG4637, Predicted ATPase General function prediction only 162449304 Nonpathogen - hypothetical protein sce1034 1 None None None 162452409 Common chiF Polyketide synthase sce4133 212 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162449676 Common - hypothetical protein sce1405 23 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162450483 Common gst8 putative glutathione-S-transferase sce2211 20 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162452192 Common ate1 arginine-tRNA-protein transferase-related protein sce3919 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 162454355 Common - Fatty acid desaturase sce6078 64 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 162456403 Nonpathogen - two-component response regulator sce8120 1 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457154 Nonpathogen - ECF-family RNA polymerase sigma factor sce8869 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455639 Nonpathogen - hypothetical protein sce7357 1 None None None 162449348 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase sce1078 31 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 162455416 Nonpathogen - hypothetical protein sce7134 1 None None None 162452660 Common - hypothetical protein sce4384 15 None None None 162454480 Nonpathogen - hypothetical protein sce6199 1 None None None 162448909 Common nadB L-aspartate oxidase sce0639 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 162454482 Common - putative Thiol-disulfide oxidoreductase sce6202 20 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 162454952 Nonpathogen - hypothetical protein sce6670 1 None None None 162454719 Common - hypothetical protein sce6437 138 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162450238 Common - hypothetical protein sce1966 3 COG5373 COG5373, Predicted membrane protein Function unknown 162454487 Common cstA carbon starvation protein A sce6207 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 162448501 Nonpathogen - hypothetical protein sce0231 1 None None None 162450922 Common - hypothetical protein sce2650 8 None None None 162455738 Common - Rhs element Vgr protein sce7456 43 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162457151 Nonpathogen - hypothetical protein sce8866 1 COG5635 COG5635, Predicted NTPase (NACHT family) Signal transduction mechanisms 162453733 Common - Protein kinase sce5457 230 COG3899 COG3899, Predicted ATPase General function prediction only 162456844 Common tcbA putative toxin subunit sce8561 12 None None None 162451901 Common - hypothetical protein sce3628 22 COG4270 COG4270, Predicted membrane protein Function unknown 162457315 Common - put. Protein kinase C inhibitor sce9030 228 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 162451345 Common - putative membrane-associated protein sce3073 10 COG4402 COG4402, Uncharacterized protein conserved in bacteria Function unknown 162455866 Common - cytochrome c family protein sce7584 26 None None None 162454840 Common - hypothetical protein sce6558 73 COG2717 COG2717, Predicted membrane protein Function unknown 162454913 Nonpathogen - hypothetical protein sce6631 1 None None None 162450591 Common - putative secreted protein sce2319 23 COG2968 COG2968, Uncharacterized conserved protein Function unknown 162455792 Nonpathogen - hypothetical protein sce7510 1 None None None 162457500 Common - hypothetical protein sce9214 3 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 162453589 Common - hypothetical protein sce5313 4 None None None 162453338 Common - hypothetical protein sce5062 175 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162449583 Nonpathogen - hypothetical protein sce1312 1 None None None 162450344 Common - putative secreted protein sce2072 16 None None None 162450498 Common aroE2 Shikimate dehydrogenase sce2226 206 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 162453235 Nonpathogen - hypothetical protein sce4959 1 None None None 162450352 Common - transposase sce2080 48 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 162449494 Common - hypothetical protein sce1224 29 COG5485 COG5485, Predicted ester cyclase General function prediction only 162449322 Nonpathogen - hypothetical protein sce1052 1 None None None 162454914 Common - transcription factor jumonji (jmjC) domain-containing protein sce6632 22 COG2850 COG2850, Uncharacterized conserved protein Function unknown 162455154 Nonpathogen - hypothetical protein sce6872 1 None None None 162453777 Common - putative regulatory protein sce5501 32 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455002 Common - hypothetical protein sce6720 12 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 162456261 Nonpathogen - hypothetical protein sce7978 1 None None None 162455421 Common noxC hypothetical protein sce7139 75 COG0778 NfnB, Nitroreductase Energy production and conversion 162451114 Nonpathogen - putative secreted protein sce2843 1 COG5373 COG5373, Predicted membrane protein Function unknown 162454240 Nonpathogen - hypothetical protein sce5963 1 None None None 162451692 Nonpathogen - Triple functional domain protein sce3420 1 COG5373 COG5373, Predicted membrane protein Function unknown 162451437 Common - hypothetical protein sce3165 19 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162451994 Nonpathogen - no similarity sce3721 1 COG4907 COG4907, Predicted membrane protein Function unknown 162453941 Common - hypothetical protein sce5665 89 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162448844 Common cyaX putative adenylate cyclase sce0574 89 COG3322 COG3322, Predicted periplasmic ligand-binding sensor domain Signal transduction mechanisms 162456551 Common - hypothetical protein sce8268 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449809 Nonpathogen - hypothetical protein sce1538 1 None None None 162455835 Common - hypothetical protein sce7553 20 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 162456879 Common pp2c15 Phosphoprotein phosphatase sce8596 137 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162457342 Nonpathogen uppP undecaprenol kinase sce9057 1 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 162453799 Nonpathogen - hypothetical protein sce5523 1 COG4907 COG4907, Predicted membrane protein Function unknown 162455632 Common gap Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) sce7350 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 162452712 Common trmD tRNA (guanine-N1)-methyltransferase sce4436 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 162449360 Common cca hypothetical protein sce1090 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 162450827 Common - two-component response regulator sce2555 213 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162452590 Common - hypothetical protein sce4314 83 COG0585 COG0585, Uncharacterized conserved protein Function unknown 162448590 Common acpS holo-acyl-carrier-protein-synthase sce0320 155 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 162455136 Common - hypothetical protein sce6854 36 None None None 162453431 Common - put. 2-Dehydro-3-deoxygluconokinase sce5155 107 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 162453514 Common - hypothetical protein sce5238 5 None None None 162448735 Nonpathogen - hypothetical protein sce0465 1 None None None 162454712 Common - transcriptional regulator, AraC family sce6430 48 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162452319 Nonpathogen - hypothetical protein sce4045 1 None None None 162454321 Common - putative transposase sce6044 19 None None None 162448979 Common - transcriptional regulator, AraC family sce0709 56 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162457456 Nonpathogen - hypothetical protein sce9170 1 None None None 162451300 Common - Protein kinase sce3028 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456082 Common - sensor histidine kinase sce7800 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162452320 Common - Probable Lipase sce4046 8 COG3675 COG3675, Predicted lipase Lipid metabolism 162453866 Common - hypothetical protein sce5590 64 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451400 Nonpathogen - hypothetical protein sce3128 1 None None None 162452102 Common - Protein kinase sce3829 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451132 Common - outer membrane protein, putative sce2860 52 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 162457207 Common - Acyl-CoA dehydrogenase sce8921 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162451266 Common aglR2 adventurous gliding motility protein R sce2994 76 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 162452444 Common - hypothetical protein sce4168 10 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 162452178 Nonpathogen - putative secreted protein sce3905 2 None None None 162449814 Common - hypothetical protein sce1544 33 COG4340 COG4340, Uncharacterized protein conserved in bacteria Function unknown 162450165 Nonpathogen - hypothetical protein sce1894 3 None None None 162452828 Common - Protein kinase sce4552 181 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162453364 Common - Peptidyl-dipeptidase Dcp sce5088 16 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 162451953 Nonpathogen - hypothetical protein sce3680 1 None None None 162455497 Common - two-component system sensor protein sce7215 206 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162452239 Nonpathogen - hypothetical protein sce3966 1 None None None 162454988 Common - transposase sce6706 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162454729 Common - hypothetical protein sce6447 35 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162450116 Common - Sigma-54 dependent transcriptional regulator sce1845 163 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162453594 Common - Protein kinase sce5318 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454418 Nonpathogen - Probable ATPase with chaperone activity sce6139 1 None None None 162450302 Nonpathogen - Predicted transcriptional regulator sce2029 1 COG2944 COG2944, Predicted transcriptional regulator Transcription 162452854 Common hypF hydrogenase maturation protein HypF sce4578 115 COG0068 HypF, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 162452183 Common - hypothetical protein sce3910 10 None None None 162456516 Common - hypothetical protein sce8233 144 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 162450751 Common wzx2 putative oligosaccharyl transferase sce2479 21 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 162448924 Nonpathogen - hypothetical protein sce0654 1 None None None 162449791 Common - put. DNA binding protein sce1520 4 None None None 162456149 Common - hypothetical protein sce7866 63 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 162456420 Common acnA Aconitate hydratase sce8137 222 COG1048 AcnA, Aconitase A Energy production and conversion 162456089 Common - hypothetical protein sce7807 226 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454388 Common - transposase sce6110 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162450070 Common obg GTP binding protein sce1799 249 COG0536 Obg, Predicted GTPase General function prediction only 162451413 Common glnD probable protein-PII uridylyltransferase sce3141 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 162448565 Common - putative NUDIX hydrolase sce0295 145 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162455322 Common - hypothetical protein sce7040 8 None None None 162455962 Nonpathogen - hypothetical protein sce7680 2 None None None 162449355 Common - hypothetical protein sce1085 35 COG2006 COG2006, Uncharacterized conserved protein Function unknown 162454489 Common - hypothetical protein sce6209 96 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 162449046 Nonpathogen - hypothetical protein sce0776 2 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162449610 Nonpathogen - hypothetical protein sce1339 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451082 Nonpathogen - putative secreted protein sce2810 1 COG4907 COG4907, Predicted membrane protein Function unknown 162450585 Common - Protein kinase sce2313 206 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451639 Common minE cell division topological specificity factor sce3367 78 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 162449930 Common ftsI1 Peptidoglycan glycosyltransferase sce1659 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 162451423 Common parA3 ATPase sce3151 224 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162454063 Common folC Tetrahydrofolate synthase sce5787 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 162456241 Common rplV hypothetical protein sce7958 219 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 162448567 Common ruvA holliday junction DNA helicase sce0297 209 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 162453397 Nonpathogen - hypothetical protein sce5121 4 None None None 162455761 Nonpathogen - hypothetical protein sce7479 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162449597 Nonpathogen - hypothetical protein sce1326 1 None None None 162454655 Common - hypothetical protein sce6375 30 None None None 162454084 Common - TonB-dependent receptor sce5808 119 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 162456016 Common gst18 glutathione S-transferase sce7734 100 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448429 Common pcxB dioxygenase sce0159 18 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 162453384 Nonpathogen - hypothetical protein sce5108 1 None None None 162454176 Common - CBS domain protein sce5899 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 162453934 Nonpathogen - hypothetical protein sce5658 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162454075 Nonpathogen - hypothetical protein sce5799 1 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 162456287 Nonpathogen - hypothetical protein sce8004 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162452599 Nonpathogen - hypothetical protein sce4324 1 COG4907 COG4907, Predicted membrane protein Function unknown 162449821 Common - dioxygenase sce1550 37 COG1791 COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 162452694 Common - bmp family protein sce4418 87 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 162448597 Common cysT sulfate transport system permease protein sce0327 237 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 162454675 Nonpathogen - hypothetical protein sce6395 1 None None None 162451224 Common dapE2 Succinyl-diaminopimelate desuccinylase sce2952 187 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 162454249 Common - hypothetical protein sce5972 10 None None None 162450245 Nonpathogen - put. Transmembrane protein sce1973 2 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162451165 Common - Putative short-chain dehydrogenases sce2893 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162454976 Common - hypothetical protein sce6694 2 None None None 162452075 Common aceF1 Dihydrolipoyllysine-residue acetyltransferase sce3802 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 162449889 Nonpathogen - hypothetical protein sce1618 3 None None None 162451491 Nonpathogen - hypothetical protein sce3219 1 None None None 162452368 Nonpathogen - hypothetical protein sce4092 1 None None None 162449651 Common - Protein kinase sce1380 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452013 Common - Anti-anti sigma factor protein sce3740 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162451162 Nonpathogen - hypothetical protein sce2890 1 COG5373 COG5373, Predicted membrane protein Function unknown 162450296 Common - hydroxysteroid (17-beta) dehydrogenase 4 sce2024 28 COG2030 MaoC, Acyl dehydratase Lipid metabolism 162455190 Common cobT2 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase sce6908 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 162456941 Nonpathogen - putative secreted protein sce8658 1 None None None 162448520 Common - hypothetical protein sce0250 189 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162451982 Common coaE hypothetical protein sce3709 189 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 162449824 Common - O-methyltransferase family protein sce1553 27 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 162451454 Common - Putative beta-ketoacyl synthase sce3182 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162452140 Common - hypothetical protein sce3867 4 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 162451461 Common - polyketide synthase sce3189 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162453753 Common - hypothetical protein sce5477 4 None None None 162454121 Common - permease of the major facilitator superfamily sce5845 195 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162452067 Nonpathogen - hypothetical protein sce3794 2 None None None 162450446 Nonpathogen - hypothetical protein sce2174 1 COG4907 COG4907, Predicted membrane protein Function unknown 162456683 Nonpathogen - hypothetical protein sce8400 10 None None None 162451409 Common - hypothetical protein sce3137 6 None None None 162457571 Common - hypothetical protein sce9285 16 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162450640 Common leuO transcriptional regulator, LysR family sce2368 82 COG0583 LysR, Transcriptional regulator Transcription 162451991 Common - phytoene dehydrogenase sce3718 58 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162453931 Common - hypothetical protein sce5655 35 None None None 162455992 Common - transcriptional regulator, AraC family sce7710 77 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162449619 Common - ABC-type branched-chain amino acid transport system, periplasmic component sce1348 17 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 162449262 Common - transcriptional regulator, LysR family sce0992 165 COG0583 LysR, Transcriptional regulator Transcription 162455550 Common ribH Riboflavin synthase beta chain sce7268 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 162449850 Nonpathogen - hypothetical protein sce1579 1 None None None 162457218 Nonpathogen - hypothetical protein sce8933 1 None None None 162456558 Nonpathogen - hypothetical protein sce8275 2 None None None 162449151 Nonpathogen - anti-sigma factor sce0881 3 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 162456682 Nonpathogen - hypothetical protein sce8399 1 None None None 162457643 Nonpathogen - hypothetical penicillin-insensitive mureinendopeptidase sce9357 4 COG3770 MepA, Murein endopeptidase Cell envelope biogenesis, outer membrane 162449144 Common wzx1 oligosaccharyltransferase sce0874 74 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 162450848 Common birA Biotin-(acetyl-CoA-carboxylase) ligase sce2576 209 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 162453163 Nonpathogen - putative Phosphopantetheinyl transferase sce4887 1 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 162455490 Common - hypothetical protein sce7208 13 None None None 162457420 Nonpathogen - putative secreted protein sce9134 2 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 162449976 Common ppx1 hypothetical protein sce1705 178 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 162453404 Common - putative outer membrane protein sce5128 138 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162454821 Common - hypothetical protein sce6539 7 None None None 162451463 Common - polyketide synthase sce3191 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162450929 Common cheA5 chemotaxis protein sce2657 152 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162452906 Nonpathogen - Hypothetical membrane protein sce4630 1 COG0170 SEC59, Dolichol kinase Lipid metabolism 162448680 Common rpoB DNA-directed RNA polymerase sce0410 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 162455020 Common - Protein kinase sce6738 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448888 Common - Putative secreted protein sce0618 3 None None None 162449023 Common - hypothetical protein sce0753 2 None None None 162453919 Common - transcriptional regulator, TetR family sce5643 7 COG1309 AcrR, Transcriptional regulator Transcription 162454573 Common - hypothetical protein sce6293 9 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162456950 Common pepP hypothetical protein sce8667 222 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 162449474 Common - hypothetical protein sce1204 3 None None None 162449660 Common - putative regulatory protein sce1389 183 COG0714 COG0714, MoxR-like ATPases General function prediction only 162452574 Common - ABC-type oligopeptide transport system, ATPase component sce4298 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 162452958 Nonpathogen - hypothetical protein sce4682 1 None None None 162448878 Nonpathogen - hypothetical protein sce0608 3 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 162455508 Common sly FKBP-type peptidyl-prolyl cis-trans isomerase 2 sce7225 127 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 162451058 Common speE1 Spermidine synthase sce2786 115 COG4262 COG4262, Predicted spermidine synthase with an N-terminal membrane domain General function prediction only 162456904 Nonpathogen - hypothetical protein sce8621 1 None None None 162453562 Common - putative methyltransferase sce5286 16 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162449900 Common - Probable serine protease sce1629 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162448296 Common - hypothetical protein sce0027 15 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 162456117 Nonpathogen - hypothetical protein sce7834 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162451922 Common - hypothetical protein sce3649 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162452002 Nonpathogen - hypothetical protein sce3729 1 None None None 162448426 Common dapE1 succinyl-diaminopimelate desuccinylase sce0156 87 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 162454849 Common - hypothetical protein sce6567 148 COG1741 COG1741, Pirin-related protein General function prediction only 162448850 Common crtI1 Phytoene dehydrogenase sce0580 101 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162450102 Nonpathogen - hypothetical protein sce1831 1 None None None 162450810 Common inlA Rab family protein sce2538 30 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 162452201 Nonpathogen - hypothetical protein sce3928 1 None None None 162455145 Common - Sigma-54 dependent transcriptional regulator sce6864 172 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457599 Common - hypothetical protein sce9313 3 COG4409 NanH, Neuraminidase (sialidase) Carbohydrate transport and metabolism 162449853 Common nos Nitric-oxide synthase, oxygenase subunit sce1582 86 COG4362 COG4362, Nitric oxide synthase, oxygenase domain Inorganic ion transport and metabolism / Amino acid transport and metabolism 162457248 Nonpathogen - hypothetical protein sce8963 1 None None None 162456229 Common rpsE 30S ribosomal protein S5 sce7946 246 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 162453812 Common - hypothetical protein sce5536 29 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162449388 Nonpathogen - hypothetical protein sce1118 2 None None None 162453833 Common - hypothetical protein sce5557 12 None None None 162451291 Nonpathogen - hypothetical protein sce3019 3 COG5083 SMP2, Uncharacterized protein involved in plasmid maintenance General function prediction only 162452032 Common - hypothetical protein sce3759 10 None None None 162452633 Nonpathogen - hypothetical protein sce4357 1 None None None 162448343 Common argF1 hypothetical protein sce0074 234 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 162452916 Common srpH2 hypothetical protein sce4640 187 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 162456821 Nonpathogen - hypothetical outer membrane associated protein sce8538 1 None None None 162455936 Nonpathogen - Protein kinase sce7654 1 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449039 Common - transcriptional regulator, LysR family sce0769 106 COG0583 LysR, Transcriptional regulator Transcription 162451999 Common - hypothetical protein sce3726 50 COG3268 COG3268, Uncharacterized conserved protein Function unknown 162456958 Nonpathogen - hypothetical protein sce8675 3 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 162455482 Nonpathogen - hypothetical protein sce7200 5 None None None 162448827 Nonpathogen - hypothetical protein sce0557 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162457375 Common - putative secreted protein sce9090 6 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451823 Common - hypothetical protein sce3550 53 None None None 162456695 Common - Tryptophan 2,3-dioxygenase sce8412 40 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 162453557 Common ribA3 hypothetical protein sce5281 185 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 162452418 Nonpathogen - hypothetical protein sce4142 1 None None None 162452864 Common - Sigma-54 dependent transcriptional regulator sce4588 179 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162455579 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase sce7297 213 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 162453246 Nonpathogen - hypothetical protein sce4970 1 None None None 162454662 Common - transcriptional regulator, LysR family sce6383 92 COG0583 LysR, Transcriptional regulator Transcription 162449656 Common - transcriptional regulator, TetR family sce1385 27 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 162454213 Nonpathogen - hypothetical protein sce5936 18 COG1661 COG1661, Predicted DNA-binding protein with PD1-like DNA-binding motif General function prediction only 162455557 Common lepB2 hypothetical protein sce7275 189 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 162457026 Common - hypothetical protein sce8741 24 None None None 162449297 Nonpathogen - glycosyltransferase sce1027 2 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 162450107 Nonpathogen - putative transcriptional regulator sce1836 1 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 162455885 Common - Protein kinase sce7603 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456575 Nonpathogen - hypothetical protein sce8292 4 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 162453223 Nonpathogen - hypothetical protein sce4947 1 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 162455893 Common nuoL2 NADH dehydrogenase I chain L sce7611 209 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 162457633 Common - hypothetical protein sce9347 3 None None None 162453092 Common pelB hypothetical protein sce4816 21 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 162451377 Common - hypothetical protein sce3105 22 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162449244 Nonpathogen - hypothetical protein sce0974 1 None None None 162450109 Nonpathogen - hypothetical protein sce1838 1 None None None 162449010 Common - sulfate adenylyltransferase sce0740 154 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 162453158 Common - hypothetical protein sce4882 124 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162456079 Common - transcriptional regulator, LysR family sce7797 115 COG0583 LysR, Transcriptional regulator Transcription 162456912 Nonpathogen - hypothetical protein sce8629 1 None None None 162449761 Common - hypothetical protein sce1490 43 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 162454959 Common - MFS family sugar transporter sce6677 5 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 162456984 Nonpathogen - hypothetical protein sce8700 1 None None None 162455799 Nonpathogen - hypothetical protein sce7517 1 None None None 162457161 Nonpathogen - hypothetical protein sce8876 1 None None None 162449272 Common - putative glycosyl hydrolase sce1002 21 COG4225 COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins General function prediction only 162454291 Common - response regulator sce6014 216 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454705 Common - pseudogene sce_pseudo_12 14 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162454905 Nonpathogen - transposase sce6623 1 None None None 162448437 Common - ABC transporter ATP-binding protein sce0167 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162457193 Common - anti-anti sigma factor protein sce8908 67 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162456366 Common - putative copper chaperone sce8083 71 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 162451908 Nonpathogen - Quinonprotein sce3635 1 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162455777 Common rbpF RNA-binding protein sce7495 66 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 162451575 Common - hypothetical protein sce3303 31 COG4307 COG4307, Uncharacterized protein conserved in bacteria Function unknown 162452310 Common nrtB nitrate/nitrite ABC transporter membrane protein sce4036 197 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162449027 Common - hypothetical protein sce0757 34 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 162456264 Nonpathogen - hypothetical protein sce7981 14 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162452488 Nonpathogen - hypothetical protein sce4212 2 None None None 162450551 Nonpathogen - hypothetical protein sce2279 1 None None None 162451201 Nonpathogen - hypothetical protein sce2929 1 None None None 162453390 Common gid gid protein sce5114 170 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 162454145 Common - RNA polymerase sigma factor sce5869 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162455333 Common - putative periplasmic substrate-binding protein sce7051 69 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 162453763 Common - Protein kinase sce5487 180 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453747 Nonpathogen - hypothetical protein sce5471 1 None None None 162451684 Common - hypothetical protein sce3412 6 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 162451705 Common - hypothetical protein sce3433 122 COG0432 COG0432, Uncharacterized conserved protein Function unknown 162453053 Common phnW 2-aminoethylphosphonate:pyruvate aminotransferase sce4777 138 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 162454304 Common - putative OmpA family outer membrane protein sce6027 170 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452558 Common - hypothetical protein sce4282 6 None None None 162456231 Common rplF 50S ribosomal protein L6 sce7948 239 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 162454208 Common rluD3 ribosomal large subunit pseudouridine synthase D sce5931 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 162453870 Nonpathogen - predicted ornithine cyclodeaminase, mu-crystallin homolog sce5594 17 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 162454010 Nonpathogen - putative protein, similar to esterases sce5734 7 None None None 162451174 Common - GGDEF domain protein sce2902 185 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 162453617 Common - hypothetical protein sce5341 22 COG2962 RarD, Predicted permeases General function prediction only 162455687 Common rplM 50S ribosomal protein L13 sce7405 233 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 162448477 Common - hypothetical protein sce0207 38 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 162452473 Common - beta-glucosidase sce4196 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 162457123 Common - Putative [Acyl-carrier-protein] phosphodiesterase sce8838 22 COG0431 COG0431, Predicted flavoprotein General function prediction only 162454107 Common sugE SugE protein sce5831 107 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 162457084 Common dctD response regulator sce8799 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453273 Common - hypothetical protein sce4997 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 162457334 Common - hypothetical protein sce9049 12 None None None 162451271 Nonpathogen - putative secreted protein sce2999 1 None None None 162455075 Common - putative SAM-dependent methyltransferase sce6793 42 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162448793 Common nuoB1 NADH dehydrogenase (ubiquinone) sce0523 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 162457281 Common - Methylenetetrahydrofolate reductase (NAD(P)H) sce8996 53 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 162449928 Common mraW methyltransferase sce1657 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 162453173 Common - probable FAD-dependent monooxygenase sce4897 65 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162450098 Nonpathogen - hypothetical protein sce1827 2 None None None 162449631 Nonpathogen - hypothetical protein sce1360 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 162451940 Nonpathogen - hypothetical protein sce3667 2 None None None 162455300 Nonpathogen - hypothetical protein sce7018 1 None None None 162452022 Common clpB1 Chaperone clpB sce3749 89 COG0714 COG0714, MoxR-like ATPases General function prediction only 162453102 Common - hypothetical protein sce4826 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162455905 Common - hypothetical protein sce7623 66 COG1624 COG1624, Uncharacterized conserved protein Function unknown 162453333 Common - hypothetical protein sce5057 9 None None None 162454123 Nonpathogen - hypothetical protein sce5847 1 None None None 162449088 Common - Putative dioxygenase sce0818 20 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 162450738 Common - Protein kinase sce2466 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455501 Nonpathogen - hypothetical protein sce7219 1 None None None 162452835 Common - hypothetical protein sce4559 30 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162456189 Nonpathogen - hypothetical protein sce7906 1 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162452483 Nonpathogen - Phosphomevalonate kinase sce4207 1 COG1577 ERG12, Mevalonate kinase Lipid metabolism 162456977 Nonpathogen - hypothetical protein sce8693 1 None None None 162456396 Common - cation efflux system protein sce8113 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 162456543 Common - ABC transporter ATP-binding protein sce8260 203 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 162456182 Common pp2c14 Phosphoprotein phosphatase sce7899 135 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162455507 Common - hypothetical protein sce7226 172 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162451026 Common - fumarate reductase/succinate dehydrogenase flavoprotein sce2754 213 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 162450412 Common - putative secreted protein sce2140 90 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 162456156 Nonpathogen - hypothetical protein sce7873 1 None None None 162456932 Common - Protein kinase sce8649 163 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452454 Common - hypothetical protein sce4178 3 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 162451816 Common draG hypothetical protein sce3543 143 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 162452566 Common - hypothetical protein sce4290 212 COG2183 Tex, Transcriptional accessory protein Transcription 162448442 Nonpathogen - hypothetical protein sce0172 1 None None None 162456222 Common rpsM 30S ribosomal protein S13 sce7939 241 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 162451777 Common - anti-anti sigma factor protein sce3504 76 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162456359 Common - transcriptional regulator, LysR family sce8076 177 COG0583 LysR, Transcriptional regulator Transcription 162456336 Nonpathogen - hypothetical protein sce8053 1 None None None 162449708 Common nrfA Nitrite reductase (cytochrome; ammonia-forming) sce1437 40 COG3303 NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit Inorganic ion transport and metabolism 162455281 Common msbA9 ABC transporter family carbohydrate exporter sce6999 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162457555 Nonpathogen - hypothetical protein sce9269 1 None None None 162455669 Nonpathogen - hypothetical protein sce7387 1 None None None 162454183 Nonpathogen - putative exported glycine/glutamine-rich protein sce5906 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162456309 Common - putative NADH dehydrogenase (ubiquinone) sce8026 187 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 162455186 Common - hypothetical protein sce6904 34 COG3899 COG3899, Predicted ATPase General function prediction only 162449259 Nonpathogen - hypothetical protein sce0989 1 None None None 162454748 Nonpathogen - hypothetical protein sce6466 22 COG4880 COG4880, Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats General function prediction only 162455408 Common - Protein kinase sce7126 145 COG3899 COG3899, Predicted ATPase General function prediction only 162451476 Nonpathogen - hypothetical protein predicted sce3204 1 None None None 162453423 Common - hypothetical protein sce5147 5 None None None 162451309 Common - hypothetical protein sce3037 85 COG0778 NfnB, Nitroreductase Energy production and conversion 162450878 Common - hypothetical protein sce2606 9 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162451241 Nonpathogen - hypothetical protein sce2969 1 None None None 162453623 Common asd hypothetical protein sce5347 227 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 162455029 Nonpathogen - hypothetical protein sce6747 1 None None None 162449450 Common cumA oxidoreductase sce1180 138 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162451947 Common - conserved hypothetical protein TIGR00246 sce3674 164 COG1576 COG1576, Uncharacterized conserved protein Function unknown 162449671 Nonpathogen - hypothetical protein sce1400 1 COG4907 COG4907, Predicted membrane protein Function unknown 162451015 Common - putative secreted protein sce2743 19 COG4907 COG4907, Predicted membrane protein Function unknown 162451384 Common - hypothetical protein sce3112 58 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162452729 Common - transcriptional regulator, AraC family sce4453 23 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454544 Nonpathogen - hypothetical protein sce6264 2 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 162451899 Nonpathogen - hypothetical protein sce3626 1 None None None 162449550 Common - hypothetical protein sce1279 13 None None None 162455094 Common - hypothetical protein sce6812 24 COG3372 COG3372, Uncharacterized conserved protein Function unknown 162455287 Nonpathogen - cytochrome C-type biogenesis protein sce7005 2 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 162457358 Common - hypothetical protein sce9073 25 COG3482 COG3482, Uncharacterized conserved protein Function unknown 162454492 Common - hypothetical protein sce6212 28 COG3910 COG3910, Predicted ATPase General function prediction only 162457219 Common - Protein of unknown function (DUF975) sce8934 15 COG5473 COG5473, Predicted integral membrane protein Function unknown 162448746 Nonpathogen - hypothetical protein sce0476 1 None None None 162451011 Nonpathogen - PE_PGRS family protein sce2739 1 COG5164 SPT5, Transcription elongation factor Transcription 162449949 Common - hypothetical protein sce1678 10 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 162453662 Nonpathogen - hypothetical protein sce5386 1 None None None 162457443 Common - probable tonb-dependent receptor signal peptide protein sce9157 121 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162454203 Common - hypothetical protein sce5926 16 COG3930 COG3930, Uncharacterized protein conserved in bacteria Function unknown 162454259 Common - hypothetical protein sce5982 63 COG1899 DYS1, Deoxyhypusine synthase Posttranslational modification, protein turnover, chaperones 162449373 Common trpA hypothetical protein sce1103 211 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 162451356 Common - putative polysaccharide export protein, outer membrane sce3084 119 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 162450456 Common - putative electron transfer oxidoreductase sce2184 8 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 162450744 Common - putative racemase sce2472 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 162454735 Nonpathogen - hypothetical protein sce6453 1 None None None 162449700 Common - hypothetical protein sce1429 17 None None None 162452898 Common - cAMP-binding protein sce4622 30 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162449638 Nonpathogen - hypothetical membrane protein predicted by Glimmer/Critica sce1367 2 None None None 162454698 Nonpathogen - hypothetical protein sce6418 1 None None None 162448291 Common - Protein kinase sce0022 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454379 Common - transposase sce6102 59 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162456864 Common phaF pH adaptation potassium efflux protein PhaF sce8581 62 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 162452199 Common aco 3-isopropylmalate dehydratase large subunit sce3926 218 COG1048 AcnA, Aconitase A Energy production and conversion 162455586 Common - putative ferredoxin sce7304 15 COG0633 Fdx, Ferredoxin Energy production and conversion 162448686 Common - hypothetical protein sce0416 16 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162451892 Common - probable outer membrane efflux lipoprotein sce3619 23 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162453602 Common - putative SAM-dependent methyltransferases sce5326 36 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162454528 Common - hypothetical protein sce6248 60 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 162454310 Common hxk hypothetical protein sce6033 6 COG5026 COG5026, Hexokinase Carbohydrate transport and metabolism 162450871 Nonpathogen - hypothetical protein sce2599 1 None None None 162451625 Common - putative aminomethyltransferase sce3353 110 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 162454153 Common alc putative Allantoicase sce5877 34 COG4266 Alc, Allantoicase Nucleotide transport and metabolism 162454623 Nonpathogen - hypothetical protein sce6343 2 None None None 162452946 Common - hypothetical protein sce4670 25 COG4104 COG4104, Uncharacterized conserved protein Function unknown 162455358 Nonpathogen - Kazal-type protease inhibitor sce7076 3 None None None 162457466 Nonpathogen - hypothetical protein sce9180 1 None None None 162451519 Nonpathogen - hypothetical protein sce3247 2 None None None 162455910 Nonpathogen - hypothetical protein sce7628 1 None None None 162452470 Common - hypothetical protein sce4194 43 COG0748 HugZ, Putative heme iron utilization protein Inorganic ion transport and metabolism 162455058 Nonpathogen - hypothetical protein sce6776 13 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162454196 Nonpathogen - putative secreted protein sce5919 3 None None None 162455103 Nonpathogen - hypothetical protein sce6821 1 None None None 162455308 Nonpathogen - hypothetical protein sce7026 1 None None None 162450856 Nonpathogen - hypothetical protein sce2584 3 None None None 162454518 Common - Putative activator of 2-hydroxyglutaryl-CoA dehydratase sce6238 27 COG3581 COG3581, Uncharacterized protein conserved in bacteria Function unknown 162449768 Common gatA1 putative amidase sce1497 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162453878 Common hemY2 hypothetical protein sce5602 40 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 162452469 Nonpathogen - hypothetical protein sce4193 1 None None None 162452353 Common oplaH 5-oxoprolinase (ATP-hydrolyzing) sce4077 113 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162453180 Common - hypothetical protein sce4904 18 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 162450521 Common - hypothetical protein sce2249 221 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162451764 Common - putative fatty acid desaturase sce3491 35 COG3239 DesA, Fatty acid desaturase Lipid metabolism 162456592 Common sdhB2 Succinate dehydrogenase sce8309 207 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 162453465 Common - Cupin domain hypothetical protein sce5189 10 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162450466 Common - hypothetical protein sce2194 54 None None None 162453187 Common - cytochrome c peroxidase family protein,putative sce4911 82 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162449058 Common - hypothetical protein sce0788 155 COG3899 COG3899, Predicted ATPase General function prediction only 162449907 Common - ABC transporter, ATP-binding protein sce1636 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162451878 Nonpathogen - hypothetical protein sce3605 1 None None None 162449526 Common - Protein kinase sce1256 216 COG3899 COG3899, Predicted ATPase General function prediction only 162450077 Common - hypothetical protein sce1806 110 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162448350 Nonpathogen - hypothetical protein sce0081 6 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 162455924 Nonpathogen - hypothetical protein sce7642 9 COG4894 COG4894, Uncharacterized conserved protein Function unknown 162455875 Common - putative Cytochrome-c oxidase sce7593 172 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 162448835 Nonpathogen - hypothetical protein sce0565 3 COG2605 COG2605, Predicted kinase related to galactokinase and mevalonate kinase General function prediction only 162449758 Nonpathogen - hypothetical protein sce1487 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162457438 Common - putative transport/regulator protein sce9152 127 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 162450027 Common fcbC 4-hydroxybenzoyl-CoA thioesterase sce1756 40 COG0824 FcbC, Predicted thioesterase General function prediction only 162456493 Common - putative DNA helicase sce8210 49 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 162455565 Nonpathogen - hypothetical protein sce7284 2 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 162456057 Common - hypothetical protein sce7775 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457143 Common - putative phosphatase sce8858 126 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 162449682 Common - putative Dehydrogenase sce1411 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162451006 Common ubiE2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE sce2734 14 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 162449116 Common rpsS 30S ribosomal protein S19 sce0846 243 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 162451551 Common - putative lactoylglutathione lyase sce3279 13 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162454554 Nonpathogen - hypothetical protein sce6274 1 None None None 162448287 Common msbA1 ABC transporter family carbohydrate exporter sce0018 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162451248 Nonpathogen - hypothetical protein sce2976 1 None None None 162456507 Common cypA7 cytochrome P450 CYP265A1 sce8224 86 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162456596 Common - hypothetical protein sce8313 130 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 162450731 Common - hypothetical protein sce2459 171 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162453353 Common ruvC Holliday Junction Resolvase RuvC sce5077 196 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 162451524 Nonpathogen - hypothetical protein sce3252 1 None None None 162452053 Nonpathogen - putative secreted protein sce3780 1 None None None 162452756 Common recJ single-stranded-DNA-specific exonuclease RecJ sce4480 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 162455739 Nonpathogen - hypothetical protein sce7457 1 None None None 162453196 Common ssuC aliphatic sulfonate ABC transporter, membrane protein sce4920 197 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162453296 Nonpathogen - hypothetical protein sce5020 5 None None None 162453417 Common - ECF-family RNA polymerase sigma factor sce5141 153 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453969 Common - hypothetical protein sce5693 4 None None None 162448679 Common rplL 50S ribosomal protein L7/L12 sce0409 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 162450391 Common - putative racemase sce2119 54 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 162456274 Nonpathogen - putative secreted protein sce7991 1 None None None 162448725 Common - transcriptional regulator, Cro/CI family sce0455 43 COG1476 COG1476, Predicted transcriptional regulators Transcription 162455949 Common - Transcriptional regulator of the ROK-family sce7667 93 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 162455182 Nonpathogen - hypothetical protein sce6900 1 None None None 162451485 Common - hypothetical protein sce3213 35 COG1647 COG1647, Esterase/lipase General function prediction only 162456300 Nonpathogen - hypothetical protein sce8017 1 None None None 162451590 Common - put. Endoglucanase sce3318 32 COG3693 XynA, Beta-1,4-xylanase Carbohydrate transport and metabolism 162449718 Nonpathogen - putative secreted protein sce1447 1 None None None 162450567 Nonpathogen - hypothetical protein sce2295 1 None None None 162452867 Common xynB2 Endo-1,4-beta-xylanase sce4591 34 COG3693 XynA, Beta-1,4-xylanase Carbohydrate transport and metabolism 162450573 Common - hypothetical protein sce2301 46 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454195 Common - Patatin-related protein sce5918 118 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 162453220 Common - putative monooxygenase sce4944 64 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 162449122 Common - putative oxidoreductase sce0852 27 COG3320 COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162449724 Nonpathogen - Concanavalin A-like lectin/glucanase-domain containing protein sce1453 3 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162450622 Common - hypothetical protein sce2350 8 COG4248 COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains General function prediction only 162450214 Nonpathogen - hypothetical protein sce1942 8 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162456645 Nonpathogen - hypothetical protein sce8362 1 None None None 162453738 Common - Protein kinase sce5462 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450471 Nonpathogen - hypothetical protein sce2199 1 None None None 162453657 Common - transcriptional regulator, MarR family sce5381 118 COG1846 MarR, Transcriptional regulators Transcription 162453119 Common aroC 5-enolpyruvylshikimate-3-phosphate phospholyase sce4843 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 162455017 Nonpathogen - hypothetical membrane-anchored protein sce6735 1 None None None 162448514 Common - hypothetical protein sce0244 8 None None None 162455530 Nonpathogen - putative MglB protein sce7248 12 COG2018 COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid General function prediction only 162450753 Nonpathogen - hypothetical protein sce2481 1 None None None 162455631 Common pgk Phosphoglycerate kinase sce7349 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 162449911 Common lepB1 hypothetical protein sce1640 189 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 162449932 Common mraY phospho-N-acetylmuramoyl-pentapeptide transferase sce1661 212 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 162452499 Common nuoF NADH dehydrogenase (ubiquinone) sce4223 167 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 162449618 Common - putative outer membrane protein sce1347 107 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 162449681 Common - Putative araC-like transcription regulator sce1410 130 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162452533 Nonpathogen - hypothetical protein sce4257 1 COG5252 COG5252, Uncharacterized conserved protein, contains CCCH-type Zn-finger protein General function prediction only 162449346 Nonpathogen - hypothetical protein sce1076 1 None None None 162450190 Common - hypothetical protein sce1918 18 COG5626 COG5626, Uncharacterized small conserved protein Function unknown 162453611 Common - hypothetical protein sce5335 72 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 162453771 Common fdh2 Alcohol dehydrogenase sce5495 208 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162448863 Nonpathogen - cell wall surface anchor family protein sce0593 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162448533 Common moaA1 probable molybdenum cofactor biosynthesis protein A sce0263 2 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 162457471 Nonpathogen - hypothetical protein sce9185 2 None None None 162449006 Common - hypothetical protein-signal peptide prediction sce0736 7 None None None 162452954 Nonpathogen - hypothetical protein sce4678 1 None None None 162455826 Common - hypothetical protein sce7544 137 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 162449933 Common murD UDP-N-acetylmuramoylalanine-D-glutamate ligase sce1662 209 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 162455110 Common - Protein kinase sce6827 224 COG3899 COG3899, Predicted ATPase General function prediction only 162453027 Common - Sigma-54 dependent transcriptional regulator sce4751 177 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162454522 Nonpathogen - cytochrome C-type biogenesis protein sce6242 7 None None None 162454531 Nonpathogen - hypothetical protein sce6251 1 None None None 162452785 Common - LysR-family transcriptional regulator sce4510 157 COG0583 LysR, Transcriptional regulator Transcription 162453076 Common hycD formate hydrogenlyase subunit sce4800 67 COG0650 HyfC, Formate hydrogenlyase subunit 4 Energy production and conversion 162448528 Common - Conserved hypothetical protein 103 sce0258 143 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 162452347 Common - alpha-2-macroglobulin sce4071 49 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 162456101 Nonpathogen - hypothetical protein sce7819 1 None None None 162454865 Common glgA4 glycogen synthase sce6583 138 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453252 Common - hypothetical protein sce4976 8 None None None 162449806 Common - Alcohol dehydrogenase sce1535 175 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162452466 Common - hypothetical protein sce4190 222 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162452705 Nonpathogen - hypothetical protein sce4429 1 None None None 162451563 Common - Biotin/lipoyl attachment domain sce3291 221 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 162454151 Common - hypothetical protein sce5875 21 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162457378 Nonpathogen - hypothetical protein sce9093 1 None None None 162456245 Nonpathogen - hypothetical protein sce7962 1 None None None 162449940 Common - Putative dnaJ protein sce1669 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162454217 Nonpathogen - hypothetical protein sce5940 2 None None None 162448985 Common - probable oxidoreductase sce0715 197 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162452275 Common - hypothetical protein sce4002 71 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162449719 Nonpathogen - putative secreted protein sce1448 2 None None None 162453840 Common - transposase sce5564 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162453632 Common - two-componenthybrid sensor histidine kinase sce5356 217 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162450906 Common - transposase sce2634 14 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162454383 Common - transposase sce6106 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162449562 Common - hypothetical protein sce1291 48 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451206 Common - Protein kinase sce2934 152 COG3899 COG3899, Predicted ATPase General function prediction only 162454666 Common - putative maturase sce6386 16 None None None 162452962 Nonpathogen - hypothetical protein sce4686 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454777 Common - 1-acylglycerol-3-phosphate O-acyltransferase sce6495 31 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162456550 Nonpathogen - hypothetical protein sce8267 1 None None None 162449208 Common panD hypothetical protein sce0938 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 162457579 Common - hypothetical protein sce9293 48 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162455813 Nonpathogen - hypothetical protein sce7531 1 None None None 162451809 Nonpathogen - hypothetical protein sce3536 1 None None None 162453854 Nonpathogen - hypothetical protein sce5578 1 None None None 162450294 Nonpathogen - hypothetical protein sce2022 1 None None None 162451383 Nonpathogen - putative secreted protein sce3111 1 None None None 162453981 Common - hypothetical protein sce5705 11 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 162454130 Nonpathogen - putative type IV pilus assembly protein sce5854 6 COG3215 PilZ, Tfp pilus assembly protein PilZ Cell motility and secretion / Intracellular trafficking and secretion 162456973 Nonpathogen - hypothetical protein sce8689 1 None None None 162452329 Nonpathogen - hypothetical protein sce4055 1 None None None 162457369 Common - transcriptional regulator, AraC family sce9084 43 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162450486 Common - Putative hydrolase, alpha/beta hydrolase superfamily sce2214 13 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162450851 Common fba2 Fructose-bisphosphate aldolase sce2579 79 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 162455584 Nonpathogen - hypothetical protein sce7302 1 None None None 162449696 Nonpathogen - hypothetical protein sce1425 1 None None None 162451027 Common fdxE putative ferredoxin sce2755 39 COG4231 COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Energy production and conversion 162449502 Common pcpB1 Pentachlorophenol 4-monooxygenase sce1232 116 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162452240 Common - hypothetical protein/extracellular protease sce3967 9 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162454374 Nonpathogen - transposase sce6097 3 None None None 162454450 Nonpathogen - putative secreted protein sce6170 1 None None None 162451308 Nonpathogen - hypothetical protein sce3036 1 COG0400 COG0400, Predicted esterase General function prediction only 162456086 Nonpathogen - putative secreted protein sce7804 2 None None None 162450608 Nonpathogen - hypothetical protein sce2336 1 None None None 162451713 Nonpathogen - hypothetical protein sce3441 1 COG5373 COG5373, Predicted membrane protein Function unknown 162452455 Nonpathogen - hypothetical protein sce4179 1 None None None 162450531 Common - hypothetical protein sce2259 41 COG2327 WcaK, Uncharacterized conserved protein Function unknown 162450512 Common - transcriptional regulator, AraC family sce2240 87 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162453243 Common argC N-acetyl-gamma-glutamyl-phosphate reductase sce4967 210 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 162455578 Nonpathogen - hypothetical protein sce7296 1 None None None 162448728 Nonpathogen - hypothetical protein sce0458 1 None None None 162455973 Nonpathogen - hypothetical protein sce7691 4 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162451521 Nonpathogen - hypothetical protein sce3249 2 None None None 162457208 Nonpathogen - hypothetical protein sce8923 1 None None None 162449691 Nonpathogen - hypothetical protein sce1420 1 None None None 162450119 Common - Protein kinase sce1848 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451256 Common surE1 Acid phosphatase sce2984 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 162450380 Common - putative transposase sce2108 20 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 162457298 Nonpathogen - hypothetical protein sce9013 1 None None None 162451674 Common - putative transposase sce3402 5 None None None 162450314 Nonpathogen - hypothetical protein sce2042 1 None None None 162454020 Common - hypothetical protein sce5744 24 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 162451876 Nonpathogen - PE_PGRS family protein sce3603 2 None None None 162452408 Common chiG Methyltransferase sce4132 146 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162453162 Common fabG9 3-oxoacyl-[acyl-carrier-protein] reductase sce4886 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162451405 Common tsf elongation factor EF-Ts sce3133 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 162451774 Nonpathogen - hypothetical protein sce3501 1 None None None 162452945 Common - FHA domain protein sce4669 6 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162455494 Common - Protein kinase sce7212 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457326 Nonpathogen - hypothetical protein sce9041 1 None None None 162448927 Nonpathogen - hypothetical protein sce0657 1 COG4371 COG4371, Predicted membrane protein Function unknown 162450976 Common - hypothetical protein sce2704 20 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162455095 Nonpathogen - hypothetical protein sce6813 7 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 162454741 Common - putative amidohydrolase sce6459 46 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 162454218 Nonpathogen - hypothetical protein sce5941 1 None None None 162449748 Nonpathogen - hypothetical protein sce1477 1 None None None 162451718 Nonpathogen - pseudogene sce_pseudo_03 1 None None None 162453625 Nonpathogen - hypothetical protein sce5349 1 None None None 162456993 Nonpathogen czcC metal ion efflux outer membrane protein,putative sce8709 1 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162452289 Nonpathogen - pseudogene sce_pseudo_04 9 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452561 Common truB probable tRNA pseudouridine 55 synthase sce4285 242 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 162456895 Common - single-stranded DNA binding protein sce8612 215 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 162453778 Common - Protein kinase sce5502 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452744 Common pilT2 twitching motility protein sce4468 223 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 162451820 Common - anti-anti-sigma factor protein sce3547 32 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454830 Common ureA urease, beta/gamma subunit sce6548 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 162455253 Nonpathogen - cysteine-rich secretory protein precursor sce6971 4 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 162450775 Common - helicase, SNF2/RAD54 family sce2503 123 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162450419 Common hflX2 GTP-binding protein HflX sce2147 217 COG2262 HflX, GTPases General function prediction only 162453695 Common - hypothetical protein sce5419 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 162450400 Nonpathogen - putative secreted protein sce2128 1 None None None 162453329 Common fabH4 3-oxoacyl-[acyl-carrier-protein] synthase sce5053 200 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162457575 Common - hypothetical protein sce9289 6 None None None 162452516 Common - glycosyltransferase sce4240 190 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162448323 Common - hypothetical protein sce0054 8 None None None 162452677 Common - hypothetical protein sce4401 44 COG1362 LAP4, Aspartyl aminopeptidase Amino acid transport and metabolism 162456985 Nonpathogen - hypothetical protein sce8701 1 COG4980 GvpP, Gas vesicle protein General function prediction only 162449047 Common - CheA-like hybrid histidine kinase sce0777 208 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162455753 Common - transcriptional regulator, TetR family sce7471 66 COG1309 AcrR, Transcriptional regulator Transcription 162456414 Common - hypothetical protein sce8131 62 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162450883 Common - RNA polymerase sigma factor sce2611 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162452215 Common - Protein kinase sce3942 137 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453125 Nonpathogen - putative secreted protein sce4849 1 None None None 162448478 Common - hypothetical protein sce0208 8 COG2006 COG2006, Uncharacterized conserved protein Function unknown 162452313 Common - hypothetical protein sce4039 13 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162455150 Nonpathogen - hypothetical protein sce6868 1 None None None 162456539 Common - Non-ribosomal peptide synthetase sce8256 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162451450 Nonpathogen - hypothetical protein sce3178 1 None None None 162454782 Common - Protein kinase sce6500 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456030 Nonpathogen - hypothetical protein sce7748 1 None None None 162454427 Nonpathogen - hypothetical protein sce6147 3 None None None 162450792 Common oxaA probable inner-membrane protein sce2519 208 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 162456875 Common - hypothetical protein sce8592 5 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162449273 Common - ABC transporter, ATP-binding protein sce1003 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162449201 Nonpathogen - hypothetical protein sce0931 1 None None None 162449797 Common - putative D-isomer specific 2-hydroxyacid dehydrogenase family protein sce1526 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 162453954 Common - hypothetical protein sce5678 10 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 162457137 Common - Nodulation protein D sce8852 102 COG0583 LysR, Transcriptional regulator Transcription 162451233 Common - probable Na+-driven multidrug efflux pump sce2961 175 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162452639 Common - hypothetical protein sce4363 94 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162457416 Common fumC2 Fumarate hydratase sce9130 209 COG0114 FumC, Fumarase Energy production and conversion 162455374 Common prmA2 ribosomal protein L11 methyltransferase sce7092 173 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 162457098 Nonpathogen - hypothetical protein sce8813 1 None None None 162452162 Common mxcL Glutamate-1-semialdehyde 2,1-aminomutase sce3889 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 162457035 Common - hypothetical protein sce8750 2 None None None 162448493 Common - hypothetical protein sce0223 165 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450221 Common - Protein kinase sce1949 130 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452882 Common - putative PHB depolymerase sce4606 32 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162451030 Common - putative ABC transporter permease protein sce2758 156 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162452419 Common - hypothetical protein sce4143 19 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 162452725 Nonpathogen - hypothetical protein sce4449 3 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 162455086 Nonpathogen - hypothetical protein sce6804 5 None None None 162454586 Common - hypothetical protein sce6306 25 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 162452138 Nonpathogen - hypothetical protein sce3865 2 None None None 162451069 Nonpathogen - hypothetical protein sce2797 1 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 162454598 Common dapE3 Succinyl-diaminopimelate desuccinylase sce6318 104 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 162449336 Nonpathogen - hypothetical protein sce1066 1 COG5373 COG5373, Predicted membrane protein Function unknown 162457568 Nonpathogen - hypothetical protein sce9282 2 None None None 162454394 Nonpathogen - hypothetical protein sce6115 1 None None None 162448582 Common - Protein kinase sce0312 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450373 Nonpathogen - possible Pectine lyase family protein sce2101 10 None None None 162456232 Common rpsH hypothetical protein sce7949 218 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 162451251 Common - hypothetical protein sce2979 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 162449309 Common - hypothetical protein sce1039 16 COG4935 COG4935, Regulatory P domain of the subtilisin-like proprotein convertases and other proteases Posttranslational modification, protein turnover, chaperones 162457496 Nonpathogen gspL putative general secretion pathway protein L sce9210 5 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 162448946 Common astD succinylglutamic semialdehyde dehydrogenase sce0676 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162448333 Common - hypothetical protein sce0064 8 None None None 162457432 Nonpathogen - hypothetical protein sce9146 3 None None None 162448707 Nonpathogen - Acyl carrier protein-like sce0437 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162450647 Nonpathogen - hypothetical protein sce2375 1 None None None 162454802 Nonpathogen - hypothetical protein sce6520 1 COG4192 COG4192, Signal transduction histidine kinase regulating phosphoglycerate transport system Signal transduction mechanisms 162450686 Common - no similarity sce2414 10 None None None 162455172 Common - oxidoreductase, FAD-binding sce6890 31 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162450441 Common - hypothetical protein sce2169 131 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162451648 Common - ABC transport system substrate-binding protein sce3376 136 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162449400 Common - hypothetical protein sce1130 4 COG2886 COG2886, Uncharacterized small protein Function unknown 162451330 Common - Sugar ABC transporter, permease protein sce3058 144 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 162449319 Common - hypothetical protein sce1049 4 None None None 162456902 Common - putative oxidase sce8619 22 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 162454688 Common - two-component response regulator sce6408 35 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449541 Common - hypothetical protein sce1270 5 None None None 162457623 Common - hypothetical protein sce9337 38 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 162454332 Nonpathogen - hypothetical protein sce6055 1 COG4944 COG4944, Uncharacterized protein conserved in bacteria Function unknown 162453705 Common xylA hypothetical protein sce5429 69 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 162455609 Common - glycosyltransferase sce7327 210 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162451105 Nonpathogen - hypothetical protein sce2833 5 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162455743 Nonpathogen - hypothetical protein sce7461 1 None None None 162455137 Nonpathogen - hypothetical protein sce6855 1 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162456631 Common - transcriptional regulator, LysR family sce8348 122 COG0583 LysR, Transcriptional regulator Transcription 162452322 Nonpathogen - putative secreted protein sce4048 1 None None None 162450706 Common - two-component response regulator sce2434 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162453539 Common - lipoprotein, putative sce5263 23 COG5485 COG5485, Predicted ester cyclase General function prediction only 162451783 Nonpathogen - hypothetical protein sce3510 1 None None None 162451540 Common - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) sce3268 99 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 162448461 Common arsC1 possible arsenate reductase sce0191 8 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 162452410 Common chiE Polyketide synthase sce4134 212 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162452088 Common - Short-chain dehydrogenase/reductase sce3815 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162449848 Common - putative beta-galactosidase sce1577 54 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 162450610 Nonpathogen - ECF-family RNA polymerase sigma factor sce2338 3 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452141 Common - alkaline D-peptidase sce3868 126 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162456474 Common - hypothetical protein sce8191 8 None None None 162450626 Nonpathogen - hypothetical protein sce2354 10 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162449776 Common gst4 hypothetical protein sce1505 66 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162450875 Common - hypothetical protein sce2603 13 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162450539 Nonpathogen - hypothetical protein sce2267 1 None None None 162451176 Nonpathogen - hypothetical protein sce2904 1 None None None 162448691 Common - Probable outer membrane protein sce0421 154 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162451827 Common - putative sugar ABC transporter ATP-binding protein sce3554 245 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 162453525 Common - radical SAM domain protein protein sce5249 104 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 162456357 Common - hypothetical protein sce8073 44 None None None 162456767 Common dnaD DNA binding protein sce8484 5 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162448638 Common - Putative iron-sulfur protein, transmembrane protein sce0368 131 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 162451887 Nonpathogen - hypothetical protein sce3614 1 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162453860 Nonpathogen - hypothetical protein sce5584 1 None None None 162456317 Nonpathogen - hypothetical protein sce8034 1 None None None 162456343 Nonpathogen - hypothetical protein sce8060 2 None None None 162450844 Nonpathogen - hypothetical protein sce2572 2 None None None 162456384 Nonpathogen - putative secreted protein sce8101 1 None None None 162452587 Common - 5'-nucleotidase sce4311 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162457014 Common - Protein kinase sce8729 128 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453584 Common deaD3 hypothetical protein sce5308 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 162456379 Common - putative cation efflux system transmembrane protein sce8096 148 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162450228 Nonpathogen - putative secreted protein sce1956 1 None None None 162455248 Common - response regulator sce6966 208 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162456560 Common - probable Inorganic polyphosphate/ATP-NAD kinase sce8277 124 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 162453088 Nonpathogen - FHA domain protein sce4812 3 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162452148 Common nrdA2 Ribonucleoside-diphosphate reductase sce3875 222 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 162452486 Nonpathogen - hypothetical protein sce4210 1 None None None 162456843 Common - Rhs family protein sce8560 68 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162448786 Common - two-component sensor histidine kinase sce0516 219 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162450389 Nonpathogen - type I restriction-modification system endonuclease sce2117 1 COG4243 COG4243, Predicted membrane protein Function unknown 162451182 Nonpathogen cpcE hypothetical protein sce2910 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162448832 Nonpathogen - hypothetical protein sce0562 1 None None None 162457136 Common - putative NADPH:quinone reductase sce8851 157 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162451339 Nonpathogen - hypothetical protein sce3067 1 None None None 162449747 Nonpathogen - hypothetical protein sce1476 1 None None None 162453805 Common - putative SNF2/RAD54 family helicase sce5529 78 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162453104 Nonpathogen - hypothetical protein sce4828 1 None None None 162448578 Nonpathogen - putative secreted protein sce0308 1 None None None 162451538 Common gspC1 general secretion pathway protein C sce3266 5 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 162452794 Common - hypothetical protein sce4518 22 None None None 162450492 Common - LACI-type transcriptional regulator sce2220 92 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162454872 Nonpathogen - hypothetical protein sce6590 1 None None None 162456745 Nonpathogen - hypothetical protein sce8462 1 None None None 162449224 Common - transcriptional regulator, LysR family sce0954 133 COG0583 LysR, Transcriptional regulator Transcription 162448784 Nonpathogen - hypothetical protein sce0514 1 None None None 162449596 Common - Sigma-54 dependent transcriptional regulator sce1325 170 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162448306 Common - Conserved hypothetical protein YfiH sce0037 167 COG1496 COG1496, Uncharacterized conserved protein Function unknown 162448940 Common cysQ Inositol monophosphatase family protein CysQ sce0670 143 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 162455904 Nonpathogen - hypothetical protein sce7622 8 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 162457091 Common - putative ABC-2 type transport system permease protein sce8806 9 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 162455661 Nonpathogen - hypothetical protein sce7379 1 None None None 162453081 Nonpathogen - hypothetical protein sce4805 4 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162449095 Common - hypothetical protein sce0825 41 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454278 Nonpathogen - hypothetical protein sce6001 1 None None None 162449433 Nonpathogen - putative ferritin-like protein sce1163 2 None None None 162457437 Common - Guanylate cyclase sce9151 59 COG3899 COG3899, Predicted ATPase General function prediction only 162455526 Common - RNA polymerase sigma factor sce7244 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162452905 Common - hypothetical protein sce4629 61 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 162453601 Nonpathogen - hypothetical protein sce5325 1 None None None 162453938 Common - hypothetical protein sce5662 5 None None None 162449288 Common - Protein kinase sce1019 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454111 Nonpathogen - hypothetical protein sce5835 1 None None None 162451144 Nonpathogen - hypothetical protein sce2872 4 None None None 162451920 Common - putative oligopeptide ABC transporter integral membrane protein sce3647 219 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 162453666 Nonpathogen - hypothetical protein sce5390 5 None None None 162450502 Nonpathogen - hypothetical protein sce2230 1 None None None 162449876 Nonpathogen - PE_PGRS family protein sce1605 1 None None None 162454722 Nonpathogen - hypothetical protein sce6440 1 None None None 162451168 Nonpathogen - hypothetical protein sce2896 1 None None None 162450663 Common treY Malto-oligosyltrehalose synthase sce2391 101 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 162448758 Common otsA Alpha,alpha-trehalose-phosphate synthase (UDP-forming) sce0488 100 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 162449072 Nonpathogen - hypothetical protein sce0802 1 COG1406 COG1406, Predicted inhibitor of MCP methylation, homolog of CheC Cell motility and secretion 162449957 Common - hypothetical protein sce1686 36 COG4938 COG4938, Uncharacterized conserved protein Function unknown 162450846 Common - Protein kinase sce2574 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452389 Common - hypothetical protein sce4113 60 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162454001 Common - hypothetical protein sce5725 75 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162452540 Nonpathogen - hypothetical protein sce4264 2 None None None 162455715 Common - Protein kinase sce7433 120 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456121 Common - hypothetical protein sce7838 15 None None None 162455327 Nonpathogen - ECF-family RNA polymerase sigma factor sce7045 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450928 Common - two-component response regulator sce2656 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162451726 Common - SAM-dependent methyltransferase sce3453 33 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162452016 Nonpathogen - hypothetical protein sce3743 1 None None None 162453511 Common - hypothetical protein sce5235 3 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 162454960 Nonpathogen - hypothetical protein sce6678 1 None None None 162451261 Common rrpP Inorganic diphosphatase sce2989 98 COG3808 OVP1, Inorganic pyrophosphatase Energy production and conversion 162453448 Nonpathogen - putative secreted protein sce5172 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162456557 Common - hypothetical protein sce8274 67 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 162450715 Nonpathogen - hypothetical protein sce2443 2 None None None 162453308 Nonpathogen - hypothetical protein sce5033 1 None None None 162454027 Common - sulfate adenylyltransferase sce5751 154 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 162455304 Common tfdB 2,4-dichlorophenol 6-monooxygenase sce7022 73 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162451342 Nonpathogen - hypothetical protein sce3070 1 None None None 162452615 Common - hypothetical protein sce4339 73 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448369 Common - probable PPE family protein sce0099 5 None None None 162449164 Common - permease of the major facilitator superfamily sce0894 110 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162456171 Common - membrane-associated protease sce7888 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 162457058 Common - transposase sce8773 83 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 162452124 Nonpathogen - hypothetical protein sce3851 2 None None None 162449188 Nonpathogen - hypothetical protein sce0918 1 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162455311 Common - Probable Lipase sce7029 7 None None None 162457617 Common - hypothetical protein sce9331 5 None None None 162452034 Common yloC hypothetical protein sce3761 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 162457482 Nonpathogen - hypothetical protein sce9196 2 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162457600 Common - putative general secretion pathway protein C sce9314 8 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 162456666 Nonpathogen - hypothetical protein sce8383 1 None None None 162448806 Nonpathogen - hypothetical protein sce0536 3 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 162450279 Common - hypothetical protein sce2007 3 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 162454040 Common ptsI Phosphoenolpyruvate--protein phosphotransferase. sce5764 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 162454892 Common - transcriptional repressor CopY sce6610 39 COG3682 COG3682, Predicted transcriptional regulator Transcription 162453265 Common clpA endopeptidase Clp sce4989 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162455294 Common zwf2 hypothetical protein sce7012 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 162454683 Common moeY possible molybdopterin biosynthesis protein sce6403 21 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 162452422 Common - hypothetical protein sce4146 7 None None None 162454751 Nonpathogen - hypothetical protein sce6469 2 None None None 162451484 Nonpathogen - hypothetical protein sce3212 3 None None None 162454884 Nonpathogen - hypothetical protein sce6602 1 None None None 162454572 Nonpathogen - putative secreted protein sce6292 1 None None None 162456146 Common - hypothetical protein sce7863 3 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 162454639 Nonpathogen - putative secreted protein sce6359 1 COG4278 COG4278, Uncharacterized conserved protein Function unknown 162452318 Nonpathogen - hypothetical protein sce4044 2 None None None 162455317 Common - hypothetical protein sce7035 148 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455610 Common - transcriptional regulator, MerR-family sce7328 127 COG0789 SoxR, Predicted transcriptional regulators Transcription 162457051 Common - ECF-family RNA polymerase sigma factor sce8766 62 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456704 Common - hypothetical protein sce8421 52 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162456197 Common - Protein kinase sce7914 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452382 Common - hypothetical protein sce4106 2 None None None 162456136 Nonpathogen - exported O-glycosyl hydrolase sce7853 2 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162455628 Nonpathogen - hypothetical protein sce7346 1 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162453405 Common - Protein kinase sce5129 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455938 Common msbA10 ABC transporter family carbohydrate exporter sce7656 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162451293 Common - Protein kinase sce3021 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452940 Nonpathogen - hypothetical protein sce4664 3 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162456813 Common - hypothetical protein sce8530 58 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 162449472 Common - hypothetical protein sce1202 23 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162449251 Common - Putative oxidoreductase sce0981 63 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162457554 Nonpathogen - hypothetical protein sce9268 1 None None None 162452291 Common - hypothetical protein-transmembrane prediction sce4017 7 None None None 162452378 Common cga2 Glucan 1,4-alpha-glucosidase sce4102 20 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 162450861 Common - Probable Acetyl-CoA carboxylase sce2589 152 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 162456374 Common catA cation efflux protein sce8091 95 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 162452895 Common - hypothetical protein sce4619 12 None None None 162451613 Common - putative secreted protein sce3341 12 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 162448817 Common - cation efflux system protein sce0547 154 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 162455804 Common - hypothetical protein sce7522 24 COG4832 COG4832, Uncharacterized conserved protein Function unknown 162452371 Common - MATE efflux family protein sce4095 122 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162457388 Nonpathogen - transposase sce9103 1 None None None 162453910 Common - ABC transporter, ATP-binding protein sce5634 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162452632 Common - hypothetical protein sce4356 4 COG2442 COG2442, Uncharacterized conserved protein Function unknown 162449133 Common - hypothetical protein sce0863 86 COG1434 COG1434, Uncharacterized conserved protein Function unknown 162457056 Common - putative old protein sce8771 39 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 162455023 Common gst15 hypothetical protein sce6741 94 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448756 Common - hypothetical protein sce0486 29 None None None 162454823 Common - hypothetical protein sce6541 218 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 162453532 Common - fibronectin/fibrinogen-binding protein,putative sce5256 54 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 162455256 Nonpathogen - hypothetical protein sce6974 10 COG3889 COG3889, Predicted solute binding protein General function prediction only 162449391 Common - hypothetical protein sce1121 6 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162453453 Common - Sigma-54 dependent transcriptional regulator sce5177 189 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162457049 Nonpathogen - partially conserved glycine-rich hypothetical protein sce8764 1 None None None 162451127 Common pp2c5 Phosphoprotein phosphatase sce2855 136 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162451805 Common deaD2 hypothetical protein sce3532 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 162450362 Common - Putative AAA family ATPase sce2090 247 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 162457107 Nonpathogen - hypothetical protein sce8822 1 None None None 162450965 Common - putative beta-xylosidase sce2693 36 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162455984 Common - hypothetical protein sce7702 23 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 162449281 Common - hypothetical protein sce1011 20 COG3150 COG3150, Predicted esterase General function prediction only 162454474 Common cdsA Phosphatidate cytidylyltransferase sce6194 214 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 162452691 Common - similar to sugar ABC transporter, ATP-binding protein sce4415 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 162453508 Common - hypothetical protein sce5232 6 None None None 162455990 Nonpathogen - hypothetical protein sce7708 2 COG1476 COG1476, Predicted transcriptional regulators Transcription 162448531 Nonpathogen - hypothetical protein sce0261 1 COG3911 COG3911, Predicted ATPase General function prediction only 162451619 Common - Protein kinase sce3347 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457009 Common aceB hypothetical protein sce8725 102 COG2225 AceB, Malate synthase Energy production and conversion 162457199 Common - hypothetical protein sce8914 2 None None None 162453075 Nonpathogen hycX hypothetical transmembrane protein, probably involved in the FHL pathway sce4799 2 COG4237 HyfE, Hydrogenase 4 membrane component (E) Energy production and conversion 162451268 Common aglS2 Putative adventurous gliding motility protein AglS sce2996 6 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162451664 Nonpathogen - putative secreted protein sce3392 1 None None None 162453142 Common - integral membrane glycosyltransferase sce4866 102 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162452101 Nonpathogen - hypothetical protein sce3828 2 None None None 162454986 Common - hypothetical protein sce6704 8 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456237 Common rpsQ 30S ribosomal protein S17 sce7954 223 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 162450994 Common ctpA1 carboxyl-terminal protease sce2722 170 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162451289 Nonpathogen - hypothetical protein sce3017 1 None None None 162451638 Common minD septum site-determining protein minD (cell division inhibitor minD) sce3366 145 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 162448384 Nonpathogen - hypothetical protein sce0114 1 None None None 162453363 Common - hypothetical protein sce5087 84 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 162449184 Nonpathogen - hypothetical membrane-anchored protein sce0913 1 None None None 162450833 Common - hypothetical protein sce2561 15 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162448643 Common - putative beta-ketoadipyl CoA thiolase sce0373 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 162448521 Common - hypothetical protein sce0251 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 162455229 Nonpathogen - hypothetical protein sce6947 1 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 162450469 Nonpathogen - hypothetical protein sce2197 1 None None None 162456203 Common - hypothetical protein sce7920 118 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 162450076 Common - hypothetical protein sce1805 11 None None None 162451282 Common - Putative 3-hydroxy-3-methylglutaryl-CoA reductase sce3010 33 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 162453316 Common thuF Trehalose/maltose transporter permease protein sce5040 148 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 162450954 Common - cell surface glycoprotein (s-layer protein) related protein sce2682 46 None None None 162451146 Nonpathogen - hypothetical protein sce2874 1 None None None 162456568 Nonpathogen - putative secreted protein sce8285 3 None None None 162450654 Common - putative secreted protein sce2382 12 None None None 162450356 Nonpathogen - hypothetical protein sce2084 6 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162454648 Common - hypothetical protein sce6368 15 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162456395 Common - putative secreted protein sce8112 87 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162455072 Common - putative glycosyltransferase sce6790 65 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162451317 Common tauD2 hypothetical protein sce3045 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162456365 Common manB Mannan endo-1,4-beta-mannosidase sce8082 10 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162452876 Nonpathogen - hypothetical protein sce4600 1 None None None 162453036 Nonpathogen - hypothetical protein sce4760 1 None None None 162452331 Nonpathogen - hypothetical protein sce4057 1 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162456602 Common - hypothetical protein sce8319 149 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162449061 Common - hypothetical protein sce0791 32 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162450133 Common - putative periplasmic substrate-binding protein sce1862 92 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162452302 Common rbsC2 Ribose transport system permease protein sce4028 149 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162454468 Common pilM Tfp pilus assembly protein, ATPase PilM sce6188 83 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 162449996 Common - putative adenylate cyclase sce1725 86 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 162455379 Nonpathogen - hypothetical protein sce7097 1 None None None 162456012 Common - hypothetical protein sce7730 65 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162450828 Nonpathogen - hypothetical protein sce2556 1 None None None 162455363 Nonpathogen - putative secreted protein sce7081 1 None None None 162450063 Common - hypothetical protein sce1792 22 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162448698 Common - histidine kinase sce0428 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 162449987 Common - Protein kinase sce1716 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450320 Nonpathogen - hypothetical protein sce2048 1 None None None 162455673 Common - hypothetical protein sce7391 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 162453567 Common gph1 Putative phosphoglycolate phosphatase sce5291 23 COG0546 Gph, Predicted phosphatases General function prediction only 162451867 Common - hypothetical protein sce3594 53 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 162451975 Common - tRNA/rRNA methyltransferase sce3702 212 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 162450974 Common - hypothetical protein sce2702 26 COG4104 COG4104, Uncharacterized conserved protein Function unknown 162450010 Nonpathogen - recA recombinase homolog sce1739 7 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 162455032 Common - ABC transporter, ATP-binding protein sce6750 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 162450047 Common ubiE1 quinone methyltransferase sce1776 127 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162454730 Nonpathogen - putative secreted protein sce6448 1 None None None 162455537 Nonpathogen - hypothetical protein sce7255 1 None None None 162452580 Nonpathogen - CG13214 gene product sce4304 1 None None None 162454350 Common - putative thiol-disulfide isomerase sce6073 77 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162448487 Nonpathogen - hypothetical protein sce0217 1 None None None 162450112 Common - hypothetical protein sce1841 68 COG3000 ERG3, Sterol desaturase Lipid metabolism 162454555 Nonpathogen - hypothetical protein sce6275 1 None None None 162455370 Nonpathogen - hypothetical protein sce7088 1 None None None 162454335 Common - hypothetical protein sce6058 39 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 162449540 Common wecD hypothetical protein sce1269 47 COG2808 PaiB, Transcriptional regulator Transcription 162452054 Common - Protein kinase sce3781 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449038 Common - Putative Glucoamylase precursor (Glucan 14-alpha-glucosidase) (14-alpha-D-glucan glucohydrolase) sce0768 6 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 162450219 Nonpathogen - hypothetical protein sce1947 1 None None None 162451956 Common - Protein kinase sce3683 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448394 Common - putative sodium:solute transport protein sce0124 170 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 162450351 Nonpathogen - hypothetical protein sce2079 1 None None None 162454137 Nonpathogen - hypothetical protein sce5861 1 None None None 162453373 Nonpathogen - putative secreted protein sce5097 1 None None None 162451842 Common pp2c8 Phosphoprotein phosphatase sce3569 119 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162449831 Common - hypothetical protein sce1560 16 COG5634 COG5634, Uncharacterized conserved protein Function unknown 162450423 Nonpathogen - hypothetical protein sce2151 6 None None None 162450631 Common trxC1 thioredoxin sce2359 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162456607 Common - hypothetical protein sce8324 99 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162452757 Common secF protein-export membrane protein SecF sce4481 206 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 162451733 Common oppD oligopeptide ABC transporter ATP-binding protein sce3460 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 162451961 Common - hypothetical protein sce3688 120 COG1690 RtcB, Uncharacterized conserved protein Function unknown 162454992 Nonpathogen - hypothetical protein sce6710 1 None None None 162457394 Common gdhA3 Glutamate dehydrogenase (NADP(+)) sce9109 173 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 162451203 Common - hypothetical protein sce2931 7 None None None 162448665 Common - putative outer membrane protein sce0395 45 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 162454098 Common - methylamine utilization protein sce5822 94 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162448406 Common - hypothetical protein sce0136 8 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162454899 Common - transposase sce6617 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162457112 Nonpathogen - putative secreted protein sce8827 5 None None None 162452254 Nonpathogen - Protein Phosphatase sce3981 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162449067 Nonpathogen - hypothetical protein sce0797 4 None None None 162452434 Common - Transposase sce4158 27 None None None 162449235 Common - Glycosyl hydrolase family 11 member sce0965 8 COG3889 COG3889, Predicted solute binding protein General function prediction only 162450497 Common galK hypothetical protein sce2225 84 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 162453688 Nonpathogen - hypothetical protein sce5412 1 None None None 162455956 Nonpathogen - hypothetical protein sce7674 1 None None None 162451657 Nonpathogen - hypothetical protein sce3385 2 None None None 162449484 Common ilvB1 acetolactate synthase large subunit sce1214 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 162456255 Common - hypothetical protein sce7972 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 162454272 Common - response regulator sce5995 95 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 162450332 Common - hypothetical protein sce2060 72 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 162452801 Common - putative Cytochrome-c oxidase sce4525 129 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 162452131 Common moeB1 Molybdopterin synthase sulfurylase sce3858 218 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 162451353 Common lacI1 lactose operon repressor sce3081 126 COG1609 PurR, Transcriptional regulators Transcription 162456618 Nonpathogen - putative ABC transporter ATP-binding protein sce8335 1 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162450007 Common - Citrate synthase . sce1736 188 COG0372 GltA, Citrate synthase Energy production and conversion 162449463 Common - probable oxidoreductase sce1193 184 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162454368 Nonpathogen - PE_PGRS family protein sce6091 1 COG5164 SPT5, Transcription elongation factor Transcription 162457610 Common mobA putative molybdopterin-guanine dinucleotide biosynthesis protein A sce9324 33 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 162455354 Common - putative Sulfate-transporting ATPase sce7072 248 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 162455481 Nonpathogen - hypothetical protein sce7199 1 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 162457511 Common - hypothetical protein sce9225 64 COG3411 COG3411, Ferredoxin Energy production and conversion 162449258 Common - putative secreted protein sce0988 12 None None None 162450580 Nonpathogen - hypothetical protein sce2308 1 None None None 162453693 Nonpathogen - hypothetical protein sce5417 1 None None None 162450818 Common - putative regulatory protein sce2546 225 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 162455795 Common tauD3 Taurine dioxygenase sce7513 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162456832 Common - putative short-chain dehydrogenase sce8549 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162454237 Nonpathogen sixA2 Phosphohistidine phosphatase sce5960 2 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 162450821 Common - hypothetical protein sce2549 42 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 162450985 Common - hypothetical protein sce2713 21 None None None 162455468 Nonpathogen - hypothetical protein sce7186 3 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162448360 Nonpathogen - transposase sce0090 2 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162452609 Nonpathogen - hypothetical protein sce4333 1 None None None 162455236 Common - putative ABC-2 type transport system permease protein sce6954 20 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 162450200 Nonpathogen - hypothetical protein sce1928 1 None None None 162455948 Nonpathogen - putative membrane spanning transport protein sce7666 1 None None None 162450932 Common - hypothetical protein sce2660 34 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162448794 Common nuoC1 NADH dehydrogenase (ubiquinone) sce0524 167 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 162449639 Nonpathogen - PE-PGRS family protein sce1368 1 COG4907 COG4907, Predicted membrane protein Function unknown 162454357 Common yedO hypothetical protein sce6080 67 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 162456496 Common galM1 Aldose 1-epimerase sce8213 96 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 162451631 Common minC septum site-determining protein MinC sce3359 82 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 162450593 Common - Phosphoserine phosphatase sce2321 162 COG1609 PurR, Transcriptional regulators Transcription 162450866 Common - hypothetical protein sce2594 2 None None None 162457517 Common - heat-shock protein, HSP90 family sce9231 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 162452392 Common - hypothetical protein sce4116 3 None None None 162453241 Common gst11 Glutathione transferase sce4965 92 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162453647 Common - hypothetical protein sce5371 56 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 162454441 Nonpathogen - hypothetical protein sce6161 12 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162457031 Common - probable sulfate transporter, SulP family sce8746 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 162454360 Nonpathogen - hypothetical protein sce6083 1 None None None 162451536 Common - sigma-54 dependent DNA-binding response regulator sce3264 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162456563 Nonpathogen - hypothetical protein sce8280 1 None None None 162449866 Common cheW3 purine-binding chemotaxis protein CheW sce1595 128 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 162454815 Nonpathogen - hypothetical protein sce6533 1 None None None 162456015 Common metH2 Methionine synthase sce7733 176 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 162451512 Common - no similarity sce3240 3 None None None 162453703 Common - Putative sugar regulator sce5427 40 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162457304 Nonpathogen - hypothetical protein sce9019 1 None None None 162452779 Nonpathogen - hypothetical protein sce4503 3 None None None 162453782 Common celY Cellulase sce5506 9 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 162457607 Common - Alkyldihydroxyacetonephosphate synthase,putative sce9321 191 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162455167 Nonpathogen - hypothetical protein sce6885 1 COG3340 PepE, Peptidase E Amino acid transport and metabolism 162450197 Nonpathogen - hypothetical protein sce1925 1 None None None 162450053 Common rsbR1 positive regulator of sigma-B sce1782 88 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454478 Nonpathogen - hypothetical protein sce6198 1 None None None 162457360 Common - hypothetical protein sce9075 32 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 162450503 Nonpathogen - Probable Lipase sce2231 3 None None None 162448764 Common purU Formyltetrahydrofolate deformylase sce0494 216 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 162455659 Common - NDP-sugar oxidoreductase sce7377 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455941 Nonpathogen - hypothetical protein sce7659 1 None None None 162449706 Common - transcriptional regulator, LacI family sce1435 125 COG1609 PurR, Transcriptional regulators Transcription 162457580 Nonpathogen - hypothetical protein sce9294 2 COG0400 COG0400, Predicted esterase General function prediction only 162448354 Nonpathogen - hypothetical protein sce0084 1 COG4907 COG4907, Predicted membrane protein Function unknown 162448745 Common adh1 Alcohol dehydrogenase sce0475 206 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162450542 Nonpathogen - hypothetical protein sce2270 1 None None None 162449306 Common - glycosyltransferase sce1036 118 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453186 Common celB Cellulase sce4910 22 COG2730 BglC, Endoglucanase Carbohydrate transport and metabolism 162452520 Nonpathogen - hypothetical protein sce4244 4 None None None 162454591 Common - hypothetical protein sce6311 40 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 162456217 Nonpathogen - hypothetical protein sce7934 1 COG5373 COG5373, Predicted membrane protein Function unknown 162448966 Nonpathogen - hypothetical protein sce0696 2 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 162454527 Nonpathogen - hypothetical protein sce6247 1 None None None 162455655 Nonpathogen - hypothetical protein sce7374 1 None None None 162450529 Common pfp Diphosphate-fructose-6-phosphate 1-phosphotransferase sce2257 153 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 162451917 Common - hypothetical protein sce3644 4 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162455380 Common eriL chloride channel sce7098 129 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 162452209 Nonpathogen - hypothetical protein sce3936 1 None None None 162456438 Common dapF hypothetical protein sce8155 201 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 162448918 Common - ompA-family exported protein sce0648 111 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452194 Common - hypothetical protein sce3921 68 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 162456333 Common - Glycosyl hydrolase sce8050 68 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 162451193 Common - tetratricopeptide repeat protein sce2921 67 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 162456302 Common - putative methyltransferase sce8019 38 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162452833 Common - Protein kinase sce4557 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456852 Nonpathogen - hypothetical protein sce8569 1 None None None 162451382 Common - hypothetical protein sce3110 2 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 162456304 Nonpathogen - hypothetical protein sce8021 1 None None None 162454628 Nonpathogen - hypothetical protein sce6348 1 None None None 162450021 Common - putative glycosyltransferase sce1750 89 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162451776 Common - truncated anti-anti sigma factor protein sce3503 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455974 Nonpathogen - putative secreted protein sce7692 4 None None None 162449253 Nonpathogen - hypothetical protein sce0983 1 None None None 162448277 Nonpathogen - hypothetical protein sce0008 1 None None None 162448508 Common cobH hypothetical protein sce0238 119 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 162452658 Common - hypothetical protein sce4382 7 None None None 162453826 Common - Sigma-54 dependent transcriptional regulator sce5550 173 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162457609 Nonpathogen - hypothetical protein sce9323 1 COG3527 AlsD, Alpha-acetolactate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 162453293 Nonpathogen - hypothetical protein sce5017 1 None None None 162452579 Common - probable extracellular nuclease sce4303 6 None None None 162450075 Common - myo-inositol 1-phosphate synthase A1 sce1804 20 COG1260 INO1, Myo-inositol-1-phosphate synthase Lipid metabolism 162452478 Common - Protein kinase sce4202 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451721 Common oppA2 periplasmic oligopeptide-binding protein precursor sce3448 180 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 162457539 Nonpathogen - hypothetical protein sce9253 9 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 162451751 Common - fatty acid desaturase sce3478 10 COG3239 DesA, Fatty acid desaturase Lipid metabolism 162451941 Common - hypothetical protein sce3668 2 None None None 162451425 Common - hypothetical protein sce3153 51 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 162454510 Nonpathogen - hypothetical protein sce6230 1 None None None 162454632 Nonpathogen - pathogenesis-related protein, putative sce6352 4 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 162453425 Common - probable sigma-70 factor, ECF subfamily sce5149 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 162456725 Nonpathogen - hypothetical protein sce8442 1 None None None 162454257 Common - Homogentisate 1,2-dioxygenase sce5980 47 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162457082 Common - sensor histidine kinase sce8797 159 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453184 Common - putative pectate lyase sce4908 19 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 162449378 Common - ABC transporter, ATP-binding protein sce1108 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162448270 Common dnaA chromosomal replication initiator protein DnaA sce0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 162450880 Nonpathogen - hypothetical protein sce2608 1 None None None 162448299 Common secA preprotein translocase SecA subunit sce0030 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 162450425 Common - transcriptional regulator, TetR family sce2153 50 COG1309 AcrR, Transcriptional regulator Transcription 162452643 Nonpathogen - hypothetical protein sce4367 1 None None None 162455706 Nonpathogen - hypothetical protein sce7424 1 None None None 162455181 Nonpathogen - hypothetical protein sce6899 1 COG3305 COG3305, Predicted membrane protein Function unknown 162456210 Common acs Acetyl-coenzyme A synthetase sce7927 215 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 162451059 Common - putative secreted protein sce2787 12 None None None 162457359 Common - ABC transporter, ATP-binding protein sce9074 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 162451389 Nonpathogen - hypothetical protein sce3117 1 None None None 162454564 Common - transposase sce6284 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455106 Common - hypothetical protein sce6824 11 COG1204 COG1204, Superfamily II helicase General function prediction only 162453635 Nonpathogen - hypothetical protein sce5359 6 None None None 162453284 Common deoC putative Deoxyribose-phosphate aldolase sce5008 137 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 162448456 Common - two-component histidine kinase sce0186 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 162455570 Common - hypothetical protein sce7288 162 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 162449085 Nonpathogen - hypothetical protein sce0815 2 None None None 162455284 Nonpathogen - hypothetical protein sce7002 2 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 162452432 Common - putative secreted protein sce4156 7 None None None 162450561 Nonpathogen - hypothetical protein sce2289 1 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162455446 Common - hypothetical protein sce7164 76 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162449368 Common - hypothetical protein sce1098 14 COG5276 COG5276, Uncharacterized conserved protein Function unknown 162457582 Common xylB Xylulokinase sce9296 184 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 162451222 Nonpathogen - hypothetical protein sce2950 1 None None None 162450257 Common - no hits sce1985 4 None None None 162450474 Common mcp putative methyl-accepting chemotaxis protein sce2202 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 162457449 Nonpathogen - hypothetical protein sce9163 1 None None None 162456135 Common - fumarylacetoacetate hydrolase family protein sce7852 165 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 162456393 Nonpathogen - metal ion efflux outer membrane protein family protein, putative sce8110 2 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162450327 Common - hypothetical protein sce2055 12 COG3055 COG3055, Uncharacterized protein conserved in bacteria Function unknown 162448838 Common - probable bacterial hemoglobin sce0568 62 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 162457288 Common - hypothetical protein sce9003 17 None None None 162454193 Common - hypothetical protein sce5916 67 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 162455306 Common mauG hypothetical protein sce7024 43 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162451691 Common - outer membrane protein sce3419 145 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162448951 Common - ECF-family RNA polymerase sigma factor sce0681 12 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450766 Nonpathogen - hypothetical protein sce2494 8 None None None 162455547 Nonpathogen - hypothetical protein sce7265 3 None None None 162454007 Nonpathogen - hypothetical glycine-rich protein sce5731 5 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162456289 Nonpathogen - putative secreted protein sce8006 1 None None None 162451103 Nonpathogen - hypothetical protein sce2831 7 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 162455931 Nonpathogen - putative heat shock protein DnaJ, N-terminal sce7649 1 None None None 162456623 Nonpathogen - hypothetical protein sce8341 1 None None None 162455015 Common - Glycosyl hydrolase sce6733 70 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 162454737 Common - Hsp70 heat shock protein sce6455 75 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162456782 Nonpathogen - hypothetical protein sce8499 1 None None None 162455512 Common rpsA3 hypothetical protein sce7230 210 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 162457141 Common - Putative Glycine cleavage system regulatory protein sce8856 45 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 162456934 Common - outer membrane protein, putative sce8651 35 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 162455238 Common - anti-anti sigma factor protein sce6956 131 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455220 Common rpsR hypothetical protein sce6938 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 162457212 Common - esterase sce8927 33 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162449763 Common - gliding motility protein sce1492 18 COG2229 COG2229, Predicted GTPase General function prediction only 162449756 Common - Putative Beta-xylosidase sce1485 41 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162457408 Common - putative binding-protein-dependent transport protein sce9122 36 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 162451622 Common crtI3 putative phytoene dehydrogenase sce3350 92 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162451728 Common bglA1 Beta-glucosidase sce3455 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 162450135 Common - hypothetical protein sce1864 37 None None None 162450301 Nonpathogen - hypothetical protein sce2030 1 None None None 162450527 Common - hypothetical protein sce2255 20 COG2170 COG2170, Uncharacterized conserved protein Function unknown 162448541 Common - hypothetical protein sce0272 32 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 162450780 Common - putative cation/hydrogen exchanger sce2508 192 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 162455555 Common gpsA1 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) sce7273 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 162449608 Common - hypothetical protein sce1337 10 COG4278 COG4278, Uncharacterized conserved protein Function unknown 162452354 Common uxuA Mannonate dehydratase sce4078 58 COG1312 UxuA, D-mannonate dehydratase Carbohydrate transport and metabolism 162451756 Common - N-terminal domain intergin-like repeats and c-terminal-cell wall-associated hydrolase domain sce3483 25 None None None 162457190 Common - putative secreted protein sce8905 6 COG5276 COG5276, Uncharacterized conserved protein Function unknown 162450642 Common - hypothetical protein sce2370 41 COG3000 ERG3, Sterol desaturase Lipid metabolism 162451924 Common - hypothetical protein sce3651 27 COG4260 COG4260, Putative virion core protein (lumpy skin disease virus) Function unknown 162452604 Nonpathogen - hypothetical membrane-associated protein sce4328 1 None None None 162448953 Nonpathogen - hypothetical protein sce0683 1 None None None 162449448 Common - two-component response regulator sce1178 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162451865 Common yfgL Hypothetical protein yfgL. sce3592 95 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162452051 Common - putative deoxyribonuclease, TatD family sce3778 235 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 162448435 Common - ABC-type transporter substrate-binding protein sce0165 67 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162451341 Nonpathogen - hypothetical protein sce3069 1 None None None 162449909 Common astA Arginine N-succinyltransferase sce1638 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 162451553 Common norB nitric oxide reductase sce3281 72 COG3256 NorB, Nitric oxide reductase large subunit Inorganic ion transport and metabolism 162453644 Nonpathogen - lanthionine synthetase C-like family protein sce5368 3 None None None 162449110 Common fusA2 Elongation factor (EF) sce0840 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 162454678 Common gltB2 Glutamate synthase [NADPH] sce6398 185 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 162455455 Common - putative secretion protein sce7173 73 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162451528 Nonpathogen - hypothetical protein sce3256 1 None None None 162452399 Nonpathogen - hypothetical protein sce4123 1 None None None 162450104 Nonpathogen - hypothetical protein sce1833 6 None None None 162452933 Common - hypothetical protein sce4657 13 COG4329 COG4329, Predicted membrane protein Function unknown 162452262 Common - Protein kinase sce3989 228 COG3899 COG3899, Predicted ATPase General function prediction only 162455668 Common - hypothetical protein sce7386 21 COG0392 COG0392, Predicted integral membrane protein Function unknown 162449466 Nonpathogen - hypothetical protein sce1196 1 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 162450451 Nonpathogen - hypothetical protein sce2179 1 None None None 162456429 Common - hypothetical protein sce8146 19 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162451375 Common - putative secreted protein sce3103 12 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162456861 Common phaC pH adaptation potassium efflux protein PhaC sce8578 57 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 162451355 Nonpathogen - hypothetical protein sce3083 1 None None None 162449056 Nonpathogen - hypothetical protein sce0786 1 None None None 162449410 Common - transcriptional regulator, GntR family sce1140 181 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162449371 Common trpC indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase sce1101 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 162449449 Common phoD putative alkaline phosphatase sce1179 61 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 162456280 Common gloB Hydroxyacylglutathione hydrolase sce7997 214 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162453560 Common - acriflavin resistance protein sce5284 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 162449594 Common - ABC transporter permease protein sce1323 171 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162453421 Nonpathogen - putative secreted protein sce5145 1 None None None 162457567 Common - reverse transcriptase/maturase sce9281 92 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 162453947 Common - hypothetical protein sce5671 32 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 162454847 Common serS1 hypothetical protein sce6565 21 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 162452874 Common xynD Endo-1,4-beta-xylanase sce4598 40 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162454265 Common grp RNA-binding protein sce5988 66 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 162448892 Common - hypothetical protein sce0622 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453995 Nonpathogen - hypothetical protein sce5719 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162448554 Common - Protein kinase sce0284 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449902 Nonpathogen - hypothetical protein sce1631 2 None None None 162456415 Nonpathogen - hypothetical protein sce8132 2 None None None 162457089 Common asnB3 hypothetical protein sce8804 144 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 162452918 Common - putative nucleotide-binding protein sce4642 25 None None None 162456465 Common - ATPase sce8182 232 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 162452173 Common tatC Sec-independent protein translocase TatC sce3900 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 162454060 Common scoA 3-oxoacid CoA-transferase sce5784 95 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 162453649 Common - hypothetical protein sce5373 23 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162453046 Common - putative aldo/keto reductase family protein sce4770 200 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162452556 Common - probable Glutamyl-tRNA(Gln) amidotransferase subunit C sce4280 117 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 162454320 Common - hypothetical protein sce6043 16 COG3055 COG3055, Uncharacterized protein conserved in bacteria Function unknown 162454015 Nonpathogen - putative secreted protein sce5739 4 None None None 162457077 Nonpathogen - hypothetical protein sce8792 1 None None None 162456541 Common - putative syrP protein sce8258 22 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162449579 Nonpathogen - Terpenoid cylases/protein prenyltransferase-domain containing protein sce1308 2 COG4225 COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins General function prediction only 162452281 Common - hypothetical protein sce4008 10 COG3469 COG3469, Chitinase Carbohydrate transport and metabolism 162448820 Common - hypothetical protein/Zn-dependent dipeptidase (fragment) sce0550 24 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 162455703 Common - PpiC-type peptidyl-prolyl cis-trans isomerase sce7421 128 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162456059 Common - put. Maltose permease sce7777 162 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 162454894 Common - hypothetical protein sce6612 144 COG1741 COG1741, Pirin-related protein General function prediction only 162450947 Nonpathogen - hypothetical protein sce2675 1 None None None 162454167 Common - gamma-glutamyl carboxylase sce5891 7 None None None 162448281 Common - Response regulator sce0012 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457532 Nonpathogen - hypothetical protein sce9246 1 None None None 162450873 Common bglX Beta-glucosidase sce2601 142 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 162450568 Common malQ1 4-alpha-glucanotransferase sce2296 52 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 162453987 Nonpathogen - hypothetical protein sce5711 2 None None None 162454038 Common - hypothetical protein sce5762 3 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 162457480 Common - 4-aminobutyrate transaminase sce9194 236 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 162453335 Common - Metallophosphoesterase sce5059 11 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162449291 Common - conserved exported protein sce1021 7 None None None 162455775 Common - putative hydrolase sce7493 180 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162451572 Common - hypothetical protein sce3300 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 162448693 Nonpathogen - hypothetical protein sce0423 1 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162453354 Common glcD D-lactate dehydrogenase sce5078 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162454403 Common - hypothetical protein sce6124 31 COG4637 COG4637, Predicted ATPase General function prediction only 162453990 Nonpathogen - hypothetical protein sce5714 1 None None None 162452861 Nonpathogen - hypothetical protein sce4585 1 None None None 162449210 Nonpathogen - hypothetical protein sce0940 1 None None None 162448628 Common - hypothetical protein sce0358 36 COG2267 PldB, Lysophospholipase Lipid metabolism 162449177 Common - transcriptional regulator, AraC family sce0907 94 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454101 Nonpathogen - hypothetical protein sce5825 2 None None None 162456971 Common - hypothetical protein sce8687 90 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162449621 Nonpathogen - putative secreted protein sce1350 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162455056 Common - glycosyltransferase sce6774 29 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453456 Common - two-component sensor histidine kinase sce5180 215 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162455736 Nonpathogen - hypothetical protein sce7454 1 None None None 162454809 Common gst14 hypothetical protein sce6527 90 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448877 Common - hypothetical protein sce0607 8 None None None 162451682 Nonpathogen - hypothetical protein sce3410 1 None None None 162455509 Common - ABC transporter, ATP-binding protein sce7227 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162455008 Common - putative exported protein with lectin-like C-terminus sce6726 21 None None None 162456235 Common rplX hypothetical protein sce7952 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 162453068 Nonpathogen - hypothetical protein sce4792 1 None None None 162456824 Common - hypothetical protein sce8541 10 None None None 162457411 Nonpathogen - hypothetical protein sce9125 1 None None None 162454703 Common - transcriptional regulator, MarR family sce6423 73 COG1846 MarR, Transcriptional regulators Transcription 162452009 Nonpathogen - Hypothetical protein C34D4.11 sce3736 1 None None None 162451433 Common glgA2 hypothetical protein sce3161 156 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 162457125 Nonpathogen - hypothetical protein sce8840 1 None None None 162457222 Nonpathogen - putative glycosyltransferase sce8937 20 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453490 Nonpathogen - hypothetical protein sce5214 1 None None None 162452463 Common - putative secreted protein sce4187 4 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 162452634 Common - Protein kinase sce4358 158 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453275 Nonpathogen - hypothetical protein sce4999 1 None None None 162451229 Nonpathogen - hypothetical protein sce2957 5 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162456570 Common - hypothetical protein sce8287 40 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162451662 Common - phenylalanyl-tRNA synthetase, beta subunit sce3390 241 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 162455811 Nonpathogen - hypothetical protein sce7529 1 None None None 162450160 Nonpathogen - hypothetical protein sce1889 4 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162456446 Common - Protein kinase sce8163 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449686 Common - permease of the major facilitator superfamily sce1415 6 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162452988 Common - transcriptional regulator, TetR family sce4712 29 None None None 162449601 Common - putative secreted zinc protease sce1330 166 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162452115 Common - Sigma-54 dependent transcriptional regulator sce3842 91 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162456898 Common - response regulator sce8615 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162452028 Nonpathogen - hypothetical protein sce3755 1 None None None 162451814 Common map2 hypothetical protein sce3541 234 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 162452709 Common - hypothetical protein sce4433 20 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 162455560 Common kbl Glycine C-acetyltransferase sce7278 192 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 162456829 Nonpathogen - hypothetical protein sce8546 1 None None None 162452247 Common - hypothetical protein sce3974 16 COG3506 COG3506, Uncharacterized conserved protein Function unknown 162455790 Nonpathogen - hypothetical protein sce7508 1 None None None 162456574 Nonpathogen - hypothetical protein sce8291 1 None None None 162448936 Common - Sigma-54 dependent transcriptional regulator. sce0666 178 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162453031 Nonpathogen - hypothetical protein sce4755 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162449678 Nonpathogen - hypothetical protein sce1407 1 None None None 162451361 Common - transcriptional regulator, PadR family sce3089 77 COG1695 COG1695, Predicted transcriptional regulators Transcription 162453872 Nonpathogen - hypothetical protein sce5596 1 None None None 162453980 Common - hypothetical protein sce5704 2 None None None 162449169 Common - putative fibronectin-binding protein-like protein A sce0899 43 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 162455423 Common - hypothetical protein sce7141 4 None None None 162454702 Common - transcriptional regulator, ArsR family sce6422 143 COG0640 ArsR, Predicted transcriptional regulators Transcription 162448592 Common - ECF-family RNA polymerase sigma factor sce0322 139 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453808 Nonpathogen - hypothetical protein sce5532 3 None None None 162455644 Nonpathogen - hypothetical protein sce7362 1 None None None 162455888 Common - hypothetical protein sce7606 88 COG0628 PerM, Predicted permease General function prediction only 162449219 Nonpathogen - hypothetical protein sce0949 3 COG4324 COG4324, Predicted aminopeptidase General function prediction only 162454578 Nonpathogen - hypothetical protein sce6298 1 None None None 162456048 Nonpathogen - hypothetical protein sce7766 1 None None None 162449145 Common - UDP-glucose/GDP-mannose dehydrogenase sce0875 204 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 162454621 Common - hypothetical protein sce6341 7 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162452413 Common chiB polyketide synthase sce4137 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162448737 Nonpathogen - putative membrane associated protein sce0467 1 None None None 162452662 Common - hypothetical protein sce4386 29 COG4312 COG4312, Uncharacterized protein conserved in bacteria Function unknown 162453744 Common kefC glutathione-regulated potassium-efflux system protein KefC sce5468 147 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 162453810 Common - Protein kinase sce5534 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456184 Common - ECF-family RNA polymerase sigma factor sce7901 17 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162449551 Nonpathogen - hypothetical protein sce1280 1 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 162454185 Nonpathogen - hypothetical protein sce5908 4 None None None 162449529 Nonpathogen - hypothetical protein sce1258 1 None None None 162455078 Nonpathogen - hypothetical protein sce6796 2 None None None 162451499 Common - hypothetical protein sce3227 15 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 162449731 Common tal1 hypothetical protein sce1460 179 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 162455698 Nonpathogen - hypothetical protein sce7416 2 None None None 162456759 Nonpathogen - hypothetical protein sce8476 1 None None None 162448466 Nonpathogen - hypothetical protein sce0196 1 None None None 162448961 Nonpathogen - hypothetical protein sce0691 1 None None None 162449588 Common - putative positive regulator of sigma-B sce1317 45 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162451703 Nonpathogen - hypothetical protein sce3431 1 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162452765 Nonpathogen - hypothetical protein sce4489 2 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162450085 Common purK Phosphoribosylaminoimidazole carboxylase sce1814 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 162451996 Nonpathogen - no similarity sce3723 1 None None None 162454584 Common ydzA1 hypothetical protein sce6304 16 None None None 162449816 Nonpathogen - hypothetical protein sce1545 1 None None None 162448732 Common - hypothetical protein sce0462 22 COG1403 McrA, Restriction endonuclease Defense mechanisms 162449716 Common - hypothetical protein sce1445 19 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162448923 Nonpathogen - hypothetical protein sce0653 1 None None None 162448599 Nonpathogen - hypothetical protein sce0329 1 None None None 162448907 Nonpathogen - putative secreted protein sce0637 2 None None None 162451983 Common - sensory box/GGDEF family protein sce3710 173 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 162452696 Nonpathogen - hypothetical protein sce4420 1 None None None 162457175 Nonpathogen - hypothetical protein sce8890 6 COG4700 COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats Function unknown 162451403 Common rpsB hypothetical protein sce3132 241 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 162452727 Common - DNA gyrase subunit A sce4451 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 162450167 Common - putative esterase sce1896 10 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162452817 Common pnpA polynucleotide phosphorylase sce4541 239 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 162455784 Common - DNA repair protein RadC sce7502 124 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 162449632 Nonpathogen - hypothetical protein sce1361 1 None None None 162452008 Common leuB1 3-isopropylmalate dehydrogenase sce3735 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 162452047 Common mviN virulence factor MviN homolog sce3774 170 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 162453433 Common kduD gluconate dehydrogenase sce5157 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162455837 Common - 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase sce7555 164 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 162456919 Nonpathogen - putative secreted protein sce8636 1 None None None 162457209 Nonpathogen - hypothetical protein sce8924 1 None None None 162450589 Common - hypothetical protein sce2317 24 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 162450645 Common - putative peroxidase sce2373 27 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 162449426 Nonpathogen - hypothetical protein sce1156 1 None None None 162449810 Common - hypothetical protein sce1539 44 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 162450355 Nonpathogen - hypothetical protein sce2083 1 None None None 162454792 Common - putative ExbD/TolR-like translocation protein sce6510 4 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162450387 Common - Glycogen debranching enzyme (Glycogen debrancher) sce2115 46 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 162454069 Nonpathogen - hypothetical protein sce5793 1 COG5373 COG5373, Predicted membrane protein Function unknown 162457367 Nonpathogen - hypothetical protein sce9082 1 None None None 162449570 Nonpathogen - hypothetical protein sce1299 1 None None None 162454788 Nonpathogen - hypothetical protein sce6506 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162448998 Common - hypothetical protein sce0728 3 None None None 162448887 Common - Probable DnaJ molecular chaperone sce0617 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162448904 Nonpathogen - hypothetical protein sce0634 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162451468 Nonpathogen - hypothetical protein sce3196 1 None None None 162448882 Nonpathogen - hypothetical protein sce0612 1 None None None 162455191 Nonpathogen cobS probable cobalamin synthase sce6909 3 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 162456064 Common - Protein kinase sce7782 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450510 Nonpathogen - hypothetical protein sce2238 1 None None None 162448673 Common rpmG1 hypothetical protein sce0403 46 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 162457551 Common - Probable ABC transporter permease protein y4oQ. sce9265 143 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 162450308 Common appC oligopeptide ABC transporter, permease component sce2036 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162448931 Common - Mannan endo-1,4-beta-mannosidase sce0661 15 COG3934 COG3934, Endo-beta-mannanase Carbohydrate transport and metabolism 162454916 Nonpathogen - hypothetical protein sce6634 1 None None None 162453577 Nonpathogen - hypothetical protein sce5301 1 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 162448853 Common crtZ Beta-carotene hydroxylase sce0583 14 None None None 162449962 Common - sigma-54 dependent DNA-binding response regulator sce1691 217 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450725 Common speA arginine decarboxylase sce2453 153 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 162450915 Common - hypothetical protein sce2643 30 None None None 162451696 Common pitX2 Putative Pit accessory protein sce3424 65 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 162455638 Common - anti-anti sigma factor protein sce7356 39 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162452066 Common - Sigma-54 dependent transcriptional regulator sce3793 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162455196 Nonpathogen - Tat pathway signal sequence sce6914 5 None None None 162455131 Common - hypothetical protein sce6849 41 COG3055 COG3055, Uncharacterized protein conserved in bacteria Function unknown 162455436 Common phlC1 hypothetical protein sce7154 32 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 162450278 Nonpathogen - hypothetical protein sce2006 1 None None None 162454513 Nonpathogen - hypothetical protein sce6233 1 None None None 162454985 Common - hypothetical protein sce6703 14 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162452598 Nonpathogen - hypothetical protein sce4322 4 None None None 162453724 Common - ECF-family RNA polymerase sigma factor sce5448 61 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450150 Common - ECF-family RNA polymerase sigma factor sce1879 83 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450672 Common carA2 Carbamoyl-phosphate synthase sce2400 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 162452572 Common gspE1 general secretion pathway protein E sce4296 208 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 162454673 Nonpathogen - hypothetical protein sce6393 1 COG4907 COG4907, Predicted membrane protein Function unknown 162448864 Common rbsK Ribokinase sce0594 143 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 162454174 Common - putative N6-adenine DNA/RNA methylase sce5898 18 COG1041 COG1041, Predicted DNA modification methylase DNA replication, recombination, and repair 162449851 Common - hypothetical protein sce1580 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 162452315 Common - hypothetical protein sce4041 33 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162456805 Nonpathogen - hypothetical protein sce8522 1 None None None 162453395 Common glpQ Glycerophosphodiester phosphodiesterase sce5119 109 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 162451593 Common - hypothetical protein sce3321 5 None None None 162451001 Common - hypothetical protein sce2729 3 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162448708 Common - Cystathionine beta-synthase sce0438 230 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162449260 Nonpathogen - hypothetical protein sce0990 3 COG5470 COG5470, Uncharacterized conserved protein Function unknown 162453651 Common - hypothetical protein sce5375 176 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 162456943 Common - transcriptional regulator, MerR family sce8660 139 COG0789 SoxR, Predicted transcriptional regulators Transcription 162454713 Common - Putative outer membrane protein sce6431 130 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162453463 Nonpathogen - hypothetical protein sce5187 1 None None None 162455844 Nonpathogen - hypothetical protein sce7562 1 None None None 162452952 Common - probable short-chain dehydrogenase/reductase family protein sce4676 234 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162448569 Common - hypothetical protein sce0299 45 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 162456155 Nonpathogen - hypothetical protein sce7872 1 None None None 162451399 Nonpathogen - hypothetical protein sce3127 1 None None None 162457147 Common - BKRF1 encodes EBNA-1 protein, latent cycle gene sce8862 7 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162456453 Nonpathogen - hypothetical protein sce8170 1 COG5373 COG5373, Predicted membrane protein Function unknown 162457542 Nonpathogen - putative secreted protein sce9256 2 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162451185 Nonpathogen - hypothetical protein sce2913 1 None None None 162451503 Common - hypothetical protein sce3231 6 None None None 162457345 Common nuoC2 NADH dehydrogenase (ubiquinone). sce9060 175 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 162457631 Nonpathogen - hypothetical protein sce9345 3 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 162450612 Common - transcriptional regulator, ArsR family sce2340 8 None None None 162450286 Common gcvT1 Aminomethyltransferase sce2014 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 162450733 Common - two-component system sensor protein sce2461 222 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 162451216 Common pstA phosphate ABC transporter, permease protein PstA sce2944 223 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 162454504 Common - transcriptional regulator, AraC family sce6224 16 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454231 Nonpathogen - hypothetical protein sce5954 1 None None None 162448451 Common - organic hydroperoxide resistance protein sce0181 96 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 162454344 Nonpathogen - Porin P precursor (Outer membrane protein D1) sce6067 4 COG3746 OprP, Phosphate-selective porin Inorganic ion transport and metabolism 162452340 Nonpathogen - hypothetical protein sce4064 1 None None None 162454926 Common - hypothetical protein sce6644 4 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162448987 Common - hypothetical protein sce0717 66 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 162450940 Common - Protein kinase sce2668 207 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162456710 Common rsbU Phosphoserine phosphatase. sce8427 120 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162457261 Nonpathogen - hypothetical protein sce8976 1 None None None 162449242 Common - hypothetical protein sce0972 49 COG2833 COG2833, Uncharacterized protein conserved in bacteria Function unknown 162452542 Nonpathogen - hypothetical protein sce4266 1 None None None 162456702 Common - hypothetical protein sce8419 18 None None None 162457016 Common - Protein kinase sce8731 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457337 Common mutL DNA mismatch repair protein MutL sce9052 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 162448715 Common glyQ Glycine--tRNA ligase alpha chain sce0445 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 162451652 Common - anti-anti sigma factor protein sce3380 103 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162449823 Common - Protein kinase sce1552 160 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453764 Common nrtC2 putative sulfonate transport system ATP-binding protein sce5488 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162456485 Nonpathogen - hypothetical protein sce8202 3 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 162455863 Nonpathogen - hypothetical protein sce7581 1 None None None 162452813 Common ubiG3 3-demethylubiquinone-9 3-O-methyltransferase sce4537 142 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162456677 Common - putative LacI-family transcriptional regulator sce8394 129 COG1609 PurR, Transcriptional regulators Transcription 162454495 Common - hypothetical protein sce6215 91 COG0714 COG0714, MoxR-like ATPases General function prediction only 162455960 Common - hypothetical carbohydrate-binding protein, Rhs family sce7678 73 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162456029 Common - putative protein phosphatase sce7747 20 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162452160 Nonpathogen - hypothetical protein sce3887 3 None None None 162450117 Common - Protein kinase sce1846 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451749 Nonpathogen - hypothetical protein sce3476 2 None None None 162448424 Common - hypothetical protein sce0154 15 None None None 162453940 Common - Pentapeptide repeat hypothetical protein sce5664 102 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162456643 Nonpathogen - hypothetical protein sce8360 1 None None None 162455271 Common - glycosyltransferase sce6989 160 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162457114 Common ydzA2 hypothetical protein sce8829 25 None None None 162449367 Common - hypothetical protein sce1097 23 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162449438 Nonpathogen - hypothetical protein sce1168 1 None None None 162454934 Nonpathogen - hypothetical protein sce6652 2 None None None 162456638 Common - hypothetical protein sce8355 4 None None None 162448372 Common - hypothetical protein sce0102 59 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162453206 Common - hypothetical protein sce4930 5 None None None 162451478 Nonpathogen - predicted subtilisin like protease sce3206 1 None None None 162452106 Common - hypothetical protein sce3833 174 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162453595 Nonpathogen - hypothetical protein sce5319 2 None None None 162453903 Common pta putative acetyltransferase sce5627 117 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 162451366 Common - hypothetical protein sce3094 65 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162448600 Nonpathogen - hypothetical protein sce0330 5 COG2940 COG2940, Proteins containing SET domain General function prediction only 162456145 Common - sigma-54 dependent DNA-binding response regulator sce7862 196 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162451154 Common phoH1 PhoH family protein sce2882 194 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 162454085 Nonpathogen - hypothetical protein sce5809 2 None None None 162454274 Common - transcriptional regulator, ArsR family sce5997 74 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162457590 Common potD spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein sce9304 136 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 162451397 Nonpathogen - hypothetical protein sce3125 1 None None None 162453570 Common - anti-anti sigma factor protein sce5294 32 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162450157 Nonpathogen - hypothetical protein sce1886 6 None None None 162457270 Nonpathogen - putative secreted protein sce8985 1 None None None 162454925 Nonpathogen - hypothetical protein sce6643 1 COG2442 COG2442, Uncharacterized conserved protein Function unknown 162451790 Nonpathogen - hypothetical protein sce3517 2 None None None 162454126 Common - conserved hypothetical protein/ATP-utilizing enzymes of the PP-loop superfamily sce5850 63 COG1606 COG1606, ATP-utilizing enzymes of the PP-loop superfamily General function prediction only 162452367 Common - anti-anti sigma factor protein sce4091 61 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162453097 Nonpathogen - hypothetical protein sce4821 1 None None None 162454485 Common ada putative regulatory protein Ada sce6205 108 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 162453817 Common - hypothetical protein sce5541 5 None None None 162457352 Nonpathogen - hypothetical protein sce9067 1 None None None 162455729 Common capB capsule biosynthesis protein CapB, (pXO2-58) sce7447 11 None None None 162448974 Common marC MarC family integral membrane protein sce0704 67 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 162453842 Nonpathogen - hypothetical protein sce5566 1 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162452976 Nonpathogen - hypothetical protein sce4700 1 None None None 162457242 Common - glycosyltransferase sce8957 98 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162451435 Nonpathogen - hypothetical protein sce3163 1 None None None 162453856 Common - putative branched-chain amino acid ABC transporter, permease protein sce5580 141 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 162454224 Common - ECF-family RNA polymerase sigma factor sce5947 169 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454940 Nonpathogen - hypothetical protein sce6658 1 None None None 162456321 Nonpathogen - hypothetical protein sce8038 1 None None None 162456404 Common - put. Trehalose/maltose hydrolase sce8121 50 COG1554 ATH1, Trehalose and maltose hydrolases (possible phosphorylases) Carbohydrate transport and metabolism 162450799 Common - Probable Acyl-[acyl-carrier protein] desaturase sce2527 12 None None None 162454761 Common - putative carbohydrate-binding exported protein sce6479 56 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 162448682 Common - response regulator sce0412 118 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 162457616 Common - hypothetical protein sce9330 3 None None None 162451390 Common - hypothetical protein sce3118 30 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162453501 Common - Protein kinase sce5225 135 COG3903 COG3903, Predicted ATPase General function prediction only 162448560 Nonpathogen - hypothetical protein sce0290 1 None None None 162454319 Common - two-component sensor histidine kinase sce6042 223 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162456293 Common hutU hypothetical protein sce8010 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 162450268 Common - NADH:flavin oxidoreductase / NADH oxidase family protein sce1996 167 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 162455401 Common - Probable serine protease sce7119 16 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162449457 Nonpathogen - hypothetical protein sce1187 13 None None None 162453345 Common tolR4 tolR protein sce5069 23 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162455347 Nonpathogen - hypothetical protein sce7065 2 None None None 162453540 Common - putative sugar-phosphate dehydrogenase sce5264 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162457442 Common - Amine oxidase (flavin-containing) sce9156 44 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 162448403 Nonpathogen - hypothetical protein sce0133 1 None None None 162452099 Common asnB2 hypothetical protein sce3826 156 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 162456223 Common rpmJ 50S ribosomal protein L36 sce7940 80 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 162449051 Nonpathogen cheW1 putative chemotaxis signal transduction protein sce0781 1 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 162450183 Nonpathogen - hypothetical protein sce1912 4 None None None 162457157 Nonpathogen - PE-PGRS family protein sce8872 3 None None None 162448799 Common gatB glutamyl-tRNA(Gln) amidotransferase, B subunit sce0529 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 162451133 Nonpathogen - dumpy sce2861 3 None None None 162451164 Nonpathogen - probable DnaJ molecular chaperone sce2892 3 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162451080 Common yieA Lysine--tRNA ligase sce2808 224 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 162453461 Nonpathogen - hypothetical protein sce5185 1 None None None 162457152 Common - ECF-family RNA polymerase sigma factor sce8867 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456518 Common yfbL2 Putative aminopeptidases sce8235 52 COG2234 Iap, Predicted aminopeptidases General function prediction only 162451151 Nonpathogen - hypothetical protein sce2879 1 None None None 162456581 Common - Putative NADP-dependent oxidoreductase sce8298 112 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 162452827 Common - Protein kinase sce4551 185 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162457628 Common - hypothetical protein sce9342 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 162448689 Common - Protein kinase sce0419 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451415 Common parB chromosome partitioning protein ParB sce3143 183 COG1475 Spo0J, Predicted transcriptional regulators Transcription 162457070 Nonpathogen - hypothetical protein sce8785 1 None None None 162453303 Common - iron-sulfur cluster-binding protein sce5027 24 COG2006 COG2006, Uncharacterized conserved protein Function unknown 162455741 Nonpathogen - hypothetical protein sce7459 1 None None None 162455783 Common - DNA repair protein sce7501 84 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 162457109 Common - hypothetical protein sce8824 110 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 162449883 Nonpathogen - putative multi-domain regulatory protein sce1612 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162457478 Common - Formate dehydrogenase. sce9192 130 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 162454785 Common - Haloperoxidase-domain containing protein sce6503 3 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162454309 Nonpathogen - hypothetical protein sce6032 2 None None None 162454664 Common hrpA ATP-dependent helicase HrpA sce6384 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 162456674 Common - WD-repeat protein sce8391 94 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162453731 Nonpathogen - hypothetical protein sce5455 1 None None None 162453132 Common - hypothetical protein sce4856 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 162453249 Common yhjG3 putative monooxygenase sce4973 77 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162456952 Nonpathogen - putative secreted protein sce8669 1 None None None 162455212 Nonpathogen - hypothetical protein sce6930 1 None None None 162455851 Nonpathogen - hypothetical protein sce7569 1 COG0562 Glf, UDP-galactopyranose mutase Cell envelope biogenesis, outer membrane 162453041 Common entB putative isochorismatase sce4765 103 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162454433 Common - two-component sensor histidine kinase sce6153 113 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453683 Common - hypothetical protein sce5407 25 COG0433 COG0433, Predicted ATPase General function prediction only 162454724 Common - putative D-tyrosyl-tRNA(Tyr) deacylase sce6442 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 162457317 Common - Methyltransferase sce9032 123 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162457254 Nonpathogen - hypothetical protein sce8969 2 None None None 162451088 Common - hypothetical protein sce2816 10 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451322 Common - putative lyase sce3050 9 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 162452736 Nonpathogen - putative secreted protein sce4460 1 None None None 162456655 Nonpathogen - hypothetical protein sce8372 1 None None None 162448305 Common fbp1 Fructose-2,6-bisphosphate 2-phosphatase sce0036 83 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 162449512 Common yjjN putative alcohol dehydrogenase sce1242 206 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162450822 Common - Aldehyde dehydrogenase sce2550 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162455419 Common ptxR transcriptional regulator, LysR family sce7137 180 COG0583 LysR, Transcriptional regulator Transcription 162452336 Nonpathogen - hypothetical protein sce4062 1 None None None 162455878 Common - putative two component system, histidine kinase sce7596 139 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162457185 Nonpathogen - hypothetical protein sce8900 1 None None None 162450579 Common - hypothetical protein sce2307 16 COG4633 COG4633, Uncharacterized protein conserved in bacteria Function unknown 162451097 Common - Protein kinase sce2825 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453549 Common - hypothetical protein sce5273 20 COG5622 COG5622, Protein required for attachment to host cells Cell motility and secretion 162452852 Common hupD Hydrogenase expression/formation protein hupD. sce4576 10 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 162453475 Nonpathogen - hypothetical protein sce5199 1 COG5439 COG5439, Uncharacterized conserved protein Function unknown 162454950 Nonpathogen - HTH-type transcriptional regulator acrR sce6668 1 COG1309 AcrR, Transcriptional regulator Transcription 162453212 Nonpathogen - hypothetical protein sce4936 1 None None None 162456910 Common - putative amidotransferase sce8627 68 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 162448740 Common - hypothetical protein sce0470 9 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162456084 Nonpathogen - hypothetical protein sce7802 1 None None None 162454302 Common - Protein kinase sce6025 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453320 Common trpE Anthranilate synthase sce5044 233 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 162450458 Nonpathogen - hypothetical protein sce2186 2 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 162450695 Nonpathogen - hypothetical protein sce2423 1 None None None 162450815 Nonpathogen - hypothetical protein sce2543 1 None None None 162453134 Common - hypothetical protein sce4858 60 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 162449045 Nonpathogen - hypothetical protein sce0775 1 None None None 162457331 Common - putative secreted protein sce9046 7 None None None 162455487 Nonpathogen - hypothetical protein sce7205 1 None None None 162449422 Nonpathogen - putative secreted protein sce1152 1 None None None 162453497 Common - hypothetical protein sce5221 17 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162455856 Common - two-component system response regulator sce7574 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162449104 Common tmk putative Thymidylate kinase sce0834 233 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 162450124 Common - hypothetical protein sce1853 8 None None None 162456421 Common - hypothetical protein sce8138 106 COG2135 COG2135, Uncharacterized conserved protein Function unknown 162453019 Nonpathogen - hypothetical glycine-rich protein sce4743 2 COG4907 COG4907, Predicted membrane protein Function unknown 162453518 Common - hypothetical protein sce5242 12 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162457296 Common - FHA domain protein sce9011 51 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162457460 Common devR Fruiting body developmental protein R sce9174 4 None None None 162451219 Common phoR1 phosphate sensory box histidine kinase PhoR sce2947 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 162451452 Common - probable enoyl-CoA hydratase/isomerase sce3180 138 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162453797 Common hsdS subunit S of type I restriction-modification system sce5521 21 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 162454854 Nonpathogen - hypothetical protein sce6572 1 None None None 162455907 Common - putative HDIG domain protein sce7625 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 162449029 Common - hypothetical protein sce0759 68 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 162457170 Common - Protein kinase sce8885 221 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452959 Nonpathogen - hypothetical protein sce4683 1 None None None 162449351 Nonpathogen - hypothetical protein sce1081 1 None None None 162454389 Common - pseudogene sce_pseudo_09 53 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162454035 Common - Acyl-CoA dehydrogenase sce5759 151 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162449581 Common - putative secreted protein sce1310 102 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 162452184 Nonpathogen - hypothetical protein sce3911 2 None None None 162455101 Nonpathogen - hypothetical protein sce6819 1 None None None 162455414 Nonpathogen - hypothetical protein sce7132 1 None None None 162450297 Nonpathogen - hypothetical protein sce2025 1 None None None 162451903 Common - WD-repeat protein sce3630 95 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162452442 Common - hypothetical protein sce4166 131 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 162449795 Common - probable oxidoreductase sce1524 200 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162453952 Common - hypothetical protein sce5676 5 None None None 162448370 Common - putative Carboxymethylenebutenolidase sce0100 81 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162454417 Common - hypothetical protein sce6138 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456094 Nonpathogen - hypothetical protein sce7812 2 COG4715 COG4715, Uncharacterized conserved protein Function unknown 162457290 Common - hypothetical protein sce9005 23 COG4243 COG4243, Predicted membrane protein Function unknown 162449895 Common hemA hypothetical protein sce1624 181 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 162448804 Nonpathogen - hypothetical protein sce0534 1 None None None 162456698 Nonpathogen - hypothetical protein sce8415 1 COG4547 CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) Coenzyme metabolism 162453107 Common - Protein kinase sce4831 162 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456537 Common - Diaminobutyrate--2-oxoglutarate transaminase sce8254 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 162453671 Nonpathogen - Probable Aminoglycoside phosphotransferase sce5395 5 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 162454832 Common ureF hypothetical protein sce6550 65 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 162454546 Common lipX similar to lactonizing lipase precursor sce6266 29 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 162448271 Common - Protein kinase sce0002 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453259 Common - hypothetical protein sce4983 23 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162456908 Common gabT2 4-aminobutyrate transaminase sce8625 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 162451715 Nonpathogen - hypothetical protein sce3443 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455614 Common - putative co-chaperone Hsc20 sce7332 46 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 162449543 Nonpathogen - putative secreted protein sce1272 14 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162457494 Nonpathogen - hypothetical protein sce9208 3 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162454804 Nonpathogen - putative transcriptional regulator sce6522 1 None None None 162451115 Common - hypothetical protein sce2842 40 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 162450241 Common - putative oxidoreductase sce1969 204 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162454139 Common cdd putative Cytidine deaminase sce5863 120 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 162451064 Common - sigma-54 dependent DNA-binding response regulator sce2792 173 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453586 Common menB Naphthoate synthase sce5310 175 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 162456143 Common - hypothetical protein sce7860 7 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162454818 Common - internalin sce6536 23 None None None 162456310 Common dapA Dihydrodipicolinate synthase sce8027 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 162451032 Common - hypothetical protein sce2760 47 COG2259 COG2259, Predicted membrane protein Function unknown 162453722 Common - Protein kinase sce5446 229 COG3899 COG3899, Predicted ATPase General function prediction only 162449213 Common - Putative dipeptidase sce0943 102 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 162457022 Nonpathogen - hypothetical protein sce8737 2 None None None 162451337 Common - Cytochrome P450 CYP110H1 sce3065 87 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162453227 Nonpathogen - FG-GAP repeat hypothetical protein sce4951 1 None None None 162454201 Common - 3-hydroxybutyryl-CoA dehydratase sce5924 184 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162457434 Common - putative NADPH:quinone reductase. sce9148 192 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162457139 Common - putative secreted protein sce8854 5 None None None 162452884 Nonpathogen - hypothetical protein-signal peptide prediction sce4608 6 None None None 162454456 Common - methylpurine-DNA glycosylase family protein sce6176 82 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 162451374 Common - ABC-type sugar transport system, periplasmic component sce3102 95 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162449406 Common modR putative regulator of molybdate uptake sce1136 58 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 162456170 Nonpathogen - hypothetical protein sce7887 1 None None None 162451840 Common mopB3 outer membrane protein sce3567 156 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162457414 Nonpathogen - hypothetical protein sce9128 7 None None None 162448584 Nonpathogen - hypothetical protein sce0314 1 None None None 162450114 Common - transcriptional regulator, LysR family sce1843 91 COG0583 LysR, Transcriptional regulator Transcription 162454048 Common - Protein kinase sce5772 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450923 Common msbA6 ABC transporter family carbohydrate exporter sce2651 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162456854 Common - putative transposase sce8571 47 COG5421 COG5421, Transposase DNA replication, recombination, and repair 162454594 Common - conserved membrane hypothetical protein sce6314 11 None None None 162448463 Nonpathogen - hypothetical protein sce0193 1 None None None 162456873 Common - Prolyl oligopeptidase sce8590 122 COG1505 COG1505, Serine proteases of the peptidase family S9A Amino acid transport and metabolism 162455683 Common - hypothetical protein sce7401 8 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 162453388 Common - hypothetical protein sce5112 11 COG2323 COG2323, Predicted membrane protein Function unknown 162453891 Common - MIP family channel protein sce5615 24 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 162456784 Nonpathogen - hypothetical protein sce8501 1 None None None 162453615 Nonpathogen - hypothetical protein sce5339 3 None None None 162456230 Common rplR 50S ribosomal protein L18 sce7947 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 162448573 Nonpathogen - hypothetical protein sce0303 1 None None None 162449221 Common - hypothetical protein sce0951 42 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 162457220 Common galE6 Probable UDP-glucose 4-epimerase sce8935 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 162453426 Common ychM putative sulfate permease, SulP family sce5150 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 162449737 Common - hypothetical protein sce1466 163 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 162453893 Common arsR2 transcriptional regulator, ArsR family sce5617 65 COG0640 ArsR, Predicted transcriptional regulators Transcription 162449334 Common - hypothetical protein sce1064 5 None None None 162452390 Nonpathogen - hypothetical protein sce4114 1 None None None 162451170 Common ctaB Protoheme IX farnesyltransferase sce2898 151 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 162453523 Common - hypothetical protein sce5247 116 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 162455068 Common - hypothetical protein sce6786 95 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162452078 Common - hypothetical protein sce3806 101 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162456296 Common dfrA dihydrokaempferol 4-reductase sce8013 173 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162457371 Common - thioredoxin family protein sce9086 225 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162449098 Common - Protein kinase sce0828 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453381 Common - hypothetical protein sce5105 93 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162456108 Common - conserved carbohydrate-binding protein, Rhs family sce7825 68 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162454795 Common - hypothetical ATPase-like protein sce6513 93 COG0714 COG0714, MoxR-like ATPases General function prediction only 162451855 Common - glycosyltransferase sce3582 177 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453194 Common ssuD alkanesulfonate monooxygenase sce4918 82 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162453086 Nonpathogen - hypothetical protein sce4810 1 None None None 162453711 Nonpathogen - putative secreted protein sce5435 14 None None None 162450563 Common - Protein kinase sce2291 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457080 Common - hypothetical protein sce8795 15 COG0782 GreA, Transcription elongation factor Transcription 162454867 Nonpathogen - hypothetical protein sce6585 5 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162448825 Common - hypothetical protein-signal peptide and transmembrane prediction sce0555 7 None None None 162451023 Nonpathogen - putative secreted protein sce2751 1 None None None 162448616 Common - hypothetical protein sce0346 10 COG4101 COG4101, Predicted mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162454092 Common - Ras-related GTP-binding protein, putative sce5816 19 COG1100 COG1100, GTPase SAR1 and related small G proteins General function prediction only 162448788 Common - probable lipase sce0518 5 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 162449036 Common - anti-anti sigma factor protein sce0766 27 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162451149 Common - serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member sce2877 29 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162450790 Common - RNA-binding protein sce2518 65 COG1847 Jag, Predicted RNA-binding protein General function prediction only 162450926 Common - two-component response regulator sce2654 148 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450537 Common - hypothetical protein sce2265 4 None None None 162453112 Common accC2 Biotin carboxylase subunit of acetyl-CoA carboxylase sce4836 223 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 162453803 Nonpathogen - hypothetical protein sce5527 1 None None None 162454559 Common - hypothetical protein sce6279 2 None None None 162449454 Common - hypothetical protein sce1184 29 COG5281 COG5281, Phage-related minor tail protein Function unknown 162449196 Common - GTP-binding protein sce0926 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 162448495 Nonpathogen - hypothetical protein sce0225 1 None None None 162453993 Common - hypothetical protein sce5717 30 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162456749 Common - hypothetical protein sce8466 116 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162449644 Common - hypothetical protein sce1373 15 None None None 162450747 Common - exodeoxyribonuclease VII, large subunit sce2475 192 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 162448760 Common - hypothetical protein sce0490 157 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 162450808 Nonpathogen - hypothetical protein sce2536 1 None None None 162452770 Common glgB 1,4-alpha-glucan branching enzyme sce4494 152 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 162453020 Common - conserved carbohydrate-binding protein, Rhs family sce4744 62 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162454939 Nonpathogen - hypothetical protein sce6657 1 None None None 162456747 Common - hypothetical protein sce8464 6 None None None 162448994 Nonpathogen - hypothetical protein sce0724 1 None None None 162452228 Common - Protein kinase sce3955 134 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451177 Nonpathogen - hypothetical protein sce2905 3 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162448316 Common - putative 3-oxoacyl-[acyl-carrier-protein] reductase sce0047 214 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162455337 Common - putative phosphatase sce7055 192 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 162452568 Common - put. Beta-glucosidase sce4292 178 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 162452143 Nonpathogen - hypothetical protein sce3870 1 None None None 162454116 Nonpathogen - hypothetical protein sce5840 2 None None None 162454765 Nonpathogen - hypothetical protein sce6483 3 None None None 162451029 Common - ABC transporter, substrate binding protein sce2757 77 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162451449 Common - hypothetical protein sce3177 11 None None None 162451394 Common ompH hypothetical protein sce3122 36 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 162452841 Common - putative spore coat protein sce4565 65 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162455066 Common - hypothetical protein sce6784 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450500 Common - putative integral membrane protein sce2228 89 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162453009 Nonpathogen - hypothetical protein sce4733 1 None None None 162452787 Common - transcriptional regulator, TetR family sce4511 12 COG1309 AcrR, Transcriptional regulator Transcription 162454681 Common mmsA methylmalonate-semialdehyde dehydrogenase sce6401 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162456810 Nonpathogen - hypothetical protein sce8527 5 None None None 162456243 Common - hypothetical protein sce7960 3 None None None 162452294 Nonpathogen - hypothetical protein sce4020 1 None None None 162450254 Nonpathogen - hypothetical protein sce1982 1 None None None 162455914 Common suhB Inositol-phosphate phosphatase sce7632 195 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 162451245 Common - putative choline dehydrogenase sce2973 102 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 162449812 Nonpathogen - hypothetical protein sce1541 1 None None None 162451672 Common - IstB-like ATP-binding protein sce3400 79 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162449784 Nonpathogen - hypothetical protein sce1513 3 None None None 162453742 Nonpathogen - hypothetical protein sce5466 2 None None None 162454643 Common - Short-chain dehydrogenase/reductase SDR sce6363 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162448916 Common - hypothetical protein sce0646 7 None None None 162449004 Common - hypothetical protein sce0734 110 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162457324 Nonpathogen - hypothetical protein sce9039 1 None None None 162449704 Nonpathogen - hypothetical protein sce1433 1 None None None 162452249 Nonpathogen - hypothetical protein sce3976 2 None None None 162449124 Nonpathogen - hypothetical protein sce0854 1 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 162453750 Nonpathogen - hypothetical protein sce5474 1 None None None 162452707 Nonpathogen - hypothetical protein sce4431 1 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 162450192 Common nucA Endoribonucleases active with either ribo-or deoxyribonucleic acids sce1921 44 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 162453634 Nonpathogen - hypothetical protein sce5358 1 None None None 162455650 Nonpathogen - hypothetical protein sce7368 1 COG4745 COG4745, Predicted membrane-bound mannosyltransferase Posttranslational modification, protein turnover, chaperones 162456859 Nonpathogen - putative secreted protein sce8576 1 None None None 162454081 Nonpathogen - hypothetical protein sce5805 1 COG3577 COG3577, Predicted aspartyl protease General function prediction only 162451871 Common - hypothetical protein sce3598 214 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162457439 Common - spermidine/putrescine transport system substrate-binding protein sce9153 134 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 162448721 Nonpathogen - hypothetical protein sce0451 1 None None None 162449420 Common nasD Nitrite reductase (NAD(P)H) sce1150 204 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 162451568 Common - hypothetical protein sce3296 39 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162456472 Common rpe Ribulose-phosphate 3-epimerase sce8189 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 162452679 Common - hypothetical protein sce4403 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 162454529 Common - sensor histidine kinase sce6249 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450720 Common kamA1 Lysine 2,3-aminomutase sce2448 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 162449129 Common - hypothetical protein sce0859 57 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 162450602 Nonpathogen - rRNA methyltransferase, putative sce2330 1 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162448410 Nonpathogen - putative secreted protein sce0140 1 None None None 162448767 Common - Putative homocysteine S-methyltransferase family protein sce0497 80 COG2040 MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Amino acid transport and metabolism 162453655 Nonpathogen - hypothetical protein sce5379 1 None None None 162454618 Nonpathogen - hypothetical protein sce6338 1 None None None 162450405 Common rppA Naringenin-chalcone synthase sce2133 38 COG3424 BcsA, Predicted naringenin-chalcone synthase Secondary metabolites biosynthesis, transport, and catabolism 162452449 Common - hypothetical protein sce4173 46 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 162450395 Common - transcriptional regulator, LysR family sce2123 151 COG0583 LysR, Transcriptional regulator Transcription 162451199 Common - hypothetical protein sce2927 15 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162453852 Common - hypothetical protein sce5576 24 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162454533 Common - hypothetical protein sce6253 120 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 162449942 Nonpathogen - hypothetical protein sce1671 1 None None None 162450908 Common - hypothetical protein sce2636 39 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162455806 Nonpathogen - hypothetical protein sce7524 1 None None None 162456588 Nonpathogen - hypothetical protein sce8305 1 None None None 162450842 Nonpathogen - hypothetical protein sce2570 1 None None None 162452497 Nonpathogen nuoK putative NADH dehydrogenase (ubiquinone) sce4221 4 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 162452453 Common ppsA1 Phosphoenolpyruvate synthase sce4177 154 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162448705 Common - hypothetical protein sce0435 81 COG2128 COG2128, Uncharacterized conserved protein Function unknown 162449861 Common - hypothetical protein sce1590 33 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162451730 Common - hypothetical protein sce3457 5 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 162449564 Nonpathogen - hypothetical protein sce1293 1 None None None 162451830 Common - putative sodium:sulfate symporter sce3557 51 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 162453962 Nonpathogen - hypothetical protein sce5686 1 None None None 162454407 Nonpathogen - hypothetical protein sce6128 1 None None None 162454687 Common - membrane protein, TerC family sce6407 106 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 162452730 Common - Putative carbon-nitrogen hydrolase sce4454 195 COG0388 COG0388, Predicted amidohydrolase General function prediction only 162452968 Common - hypothetical protein sce4692 4 None None None 162450704 Nonpathogen - hypothetical protein sce2432 1 None None None 162450034 Common - Response regulator sce1763 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162453613 Common - TPR repeat hypothetical protein sce5337 23 None None None 162448335 Common yhjG1 Pentachlorophenol monooxygenase sce0066 129 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162450518 Common yhjG2 putative monooxygenase sce2246 125 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162453773 Common polB DNA-directed DNA polymerase sce5497 64 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 162454243 Common bcp hypothetical protein sce5966 219 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162455583 Common - hypothetical protein sce7301 40 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 162451254 Common - hypothetical protein sce2981 6 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 162451753 Common - hypothetical protein sce3480 8 None None None 162449565 Nonpathogen - hypothetical protein sce1294 1 None None None 162450887 Nonpathogen - hypothetical protein sce2615 1 None None None 162449726 Nonpathogen - hypothetical protein sce1455 1 None None None 162452645 Common - hypothetical protein sce4369 20 COG0433 COG0433, Predicted ATPase General function prediction only 162453916 Nonpathogen - hypothetical protein sce5640 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162452277 Common - Transcriptional regulator, DeoR family sce4004 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 162453979 Nonpathogen - hypothetical protein sce5703 2 None None None 162454415 Common - transposase sce6136 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162451148 Common - putative hydroxylase sce2876 64 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162457235 Common - permease of the major facilitator superfamily sce8951 68 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162449344 Nonpathogen - putative exported alanine-rich protein sce1074 1 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162451584 Nonpathogen - hypothetical protein sce3312 1 None None None 162451722 Common - Alpha-glucosidase family protein sce3449 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 162448779 Common tyrS hypothetical protein sce0509 242 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162457401 Common maeB2 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)). sce9116 191 COG0281 SfcA, Malic enzyme Energy production and conversion 162454171 Common - putative Xanthine dehydrogenase sce5895 112 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 162450761 Common fruB Fructose-specific MTP sce2489 233 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 162451772 Nonpathogen - hypothetical protein sce3499 1 None None None 162455971 Nonpathogen - putative secreted protein sce7689 1 None None None 162452763 Common - Protein kinase sce4487 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453865 Nonpathogen - hypothetical protein sce5589 1 None None None 162451517 Nonpathogen - hypothetical protein sce3245 1 None None None 162455251 Common oruR1 Ornithine utilization regulator. sce6969 63 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162452672 Nonpathogen - hypothetical protein sce4396 2 COG3396 COG3396, Uncharacterized conserved protein Function unknown 162454313 Nonpathogen - hypothetical protein sce6036 1 None None None 162453123 Common - hypothetical protein sce4847 21 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162449377 Common - hypothetical protein sce1107 8 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 162449500 Nonpathogen - hypothetical protein sce1230 1 None None None 162453144 Common - hexose-1-phosphate nucleotidyltransferase sce4868 176 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 162450499 Common - hypothetical protein sce2227 55 COG3781 COG3781, Predicted membrane protein Function unknown 162454400 Nonpathogen - hypothetical protein sce6121 1 None None None 162455097 Common corA probable Mg2+ transporter CorA sce6815 177 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 162453555 Common - hypothetical protein sce5279 21 COG3461 COG3461, Uncharacterized conserved protein Function unknown 162449825 Common - Prolipoprotein diacylglyceryl transferase sce1554 6 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 162453898 Common - putative methyltransferase sce5622 178 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162448535 Nonpathogen - hypothetical protein sce0265 1 None None None 162450040 Nonpathogen - hypothetical protein sce1769 1 None None None 162450526 Common - hypothetical protein sce2254 9 COG2308 COG2308, Uncharacterized conserved protein Function unknown 162455044 Nonpathogen - putative secreted protein sce6762 2 None None None 162456513 Common metS hypothetical protein sce8230 237 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162452510 Common - Arabinose operon regulatory protein. sce4234 51 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162455496 Common - two component sensor kinase sce7214 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162456841 Nonpathogen - hypothetical protein sce8558 1 None None None 162450358 Nonpathogen - hypothetical protein sce2086 24 None None None 162452675 Common alkB Alkane 1-monooxygenase sce4399 18 COG3239 DesA, Fatty acid desaturase Lipid metabolism 162452746 Nonpathogen - hypothetical protein sce4470 2 None None None 162450996 Common - hypothetical protein sce2724 31 COG3148 COG3148, Uncharacterized conserved protein Function unknown 162451561 Nonpathogen - hypothetical protein sce3289 1 None None None 162452773 Nonpathogen - hypothetical protein sce4497 1 None None None 162454779 Common - hypothetical protein sce6497 13 None None None 162452983 Nonpathogen - hypothetical protein sce4707 2 None None None 162453606 Common aao D-amino-acid oxidase sce5330 16 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 162456815 Common - ECF-family RNA polymerase sigma factor sce8532 77 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451896 Common - hypothetical protein sce3623 115 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162457577 Common - two-component sensor histidine kinase sce9291 221 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 162448976 Common - hypothetical protein sce0706 14 COG2202 AtoS, FOG: PAS/PAC domain Signal transduction mechanisms 162456097 Common - hypothetical protein sce7815 63 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162457563 Nonpathogen - hypothetical protein sce9277 1 None None None 162449779 Common - Putative spermidine synthase sce1508 73 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 162455152 Nonpathogen - hypothetical protein sce6870 1 None None None 162450890 Common codB putative cytosine permease sce2618 71 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 162454299 Common - hypothetical protein sce6022 45 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162452074 Common pdhB2 Pyruvate dehydrogenase (acetyl-transferring) sce3801 208 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 162452759 Nonpathogen yajC preprotein translocase YajC subunit sce4483 1 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 162451359 Common - hypothetical protein sce3087 8 COG4284 COG4284, UDP-glucose pyrophosphorylase Carbohydrate transport and metabolism 162452681 Common - hypothetical protein sce4405 176 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449271 Common - hypothetical protein sce1001 6 None None None 162452256 Nonpathogen - hypothetical protein sce3983 1 None None None 162448968 Nonpathogen - hypothetical protein sce0698 1 None None None 162451931 Nonpathogen - hypothetical protein sce3658 1 None None None 162454348 Common - anti-anti sigma factor protein sce6071 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162451231 Nonpathogen - putative secreted protein sce2959 1 None None None 162454429 Nonpathogen - hypothetical protein sce6149 2 None None None 162449989 Nonpathogen - hypothetical protein sce1718 1 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162456265 Common - FHA domain protein sce7982 24 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162451659 Common - Glucosyltransferase-I precursor sce3387 31 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162454036 Nonpathogen - hypothetical protein sce5760 1 None None None 162457364 Nonpathogen - hypothetical protein sce9079 1 None None None 162451274 Common - Protein kinase sce3002 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450972 Common - putative SAM-dependent methyltransferase sce2700 42 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162455372 Nonpathogen - hypothetical protein sce7090 1 COG0400 COG0400, Predicted esterase General function prediction only 162451526 Common - putative short-chain dehydrogenase sce3254 227 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162454466 Common pilO hypothetical protein sce6186 41 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 162456778 Common - hypothetical protein sce8495 220 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453038 Common - hypothetical protein sce4762 8 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 162450055 Common - hypothetical protein sce1784 63 COG3246 COG3246, Uncharacterized conserved protein Function unknown 162453371 Nonpathogen - hypothetical protein sce5095 1 None None None 162449173 Common - hypothetical protein sce0903 209 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 162448330 Common - putative cAMP-binding protein sce0061 8 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162451169 Common - conserved putative secreted protein sce2897 17 None None None 162455084 Nonpathogen - hypothetical protein sce6802 3 None None None 162456363 Common - Protein kinase sce8080 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457534 Nonpathogen - hypothetical protein sce9248 1 None None None 162450121 Nonpathogen - hypothetical protein sce1850 1 None None None 162450785 Nonpathogen - hypothetical protein sce2513 1 None None None 162454308 Nonpathogen - hypothetical protein sce6031 3 None None None 162448283 Common hemD Uroporphyrinogen-III synthase sce0014 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 162451350 Common - Hydrolases acting on phosphorous-containinganhydrides sce3078 55 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 162449575 Common - predicted Acetyltransferase, GNAT family sce1304 16 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 162454431 Common - hypothetical protein sce6151 6 None None None 162456548 Common - putative iron uptake protein sce8265 32 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 162448948 Common - hypothetical protein sce0678 6 None None None 162456834 Common cypA8 Cytochrome P450 CYP264B1 sce8551 85 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162454605 Common - hypothetical protein sce6325 19 None None None 162451963 Common - hypothetical protein sce3690 26 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162452119 Common hemN Coproporphyrinogen oxidase sce3846 202 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 162454270 Common - Sigma-54 dependent transcriptional regulator sce5993 169 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162455356 Common - hypothetical protein sce7074 65 COG4301 COG4301, Uncharacterized conserved protein Function unknown 162451905 Common - Protein kinase sce3632 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451205 Nonpathogen - hypothetical protein sce2933 1 None None None 162448337 Common - Predicted chaperonin (heat shock protein 33) sce0068 118 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 162451253 Nonpathogen - hypothetical protein sce2982 1 None None None 162449286 Nonpathogen - hypothetical protein sce1016 1 COG4907 COG4907, Predicted membrane protein Function unknown 162449063 Common - two-component hisidine kinase sce0793 215 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162451803 Common uvrD ATP-dependent DNA helicase sce3530 234 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 162457273 Common - hypothetical protein sce8988 78 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 162457454 Common - Protein kinase sce9168 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449994 Nonpathogen - hypothetical protein sce1723 1 None None None 162455657 Common cysK7 hypothetical protein sce7375 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162455383 Common - hypothetical protein sce7101 82 COG2307 COG2307, Uncharacterized protein conserved in bacteria Function unknown 162455539 Common - hypothetical protein sce7257 42 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162456177 Nonpathogen - hypothetical protein sce7894 1 None None None 162455376 Common glgC2 Glucose-1-phosphate adenylyltransferase sce7094 170 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 162455740 Common - hypothetical protein sce7458 50 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450768 Common aroG 3-deoxy-7-phosphoheptulonate synthase sce2496 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 162454990 Nonpathogen - hypothetical protein sce6708 1 None None None 162456604 Common - vrgS conserved hypothetical protein sce8321 49 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450088 Nonpathogen - hypothetical protein sce1817 2 None None None 162448362 Common - hypothetical protein sce0092 29 None None None 162449357 Nonpathogen - hypothetical protein sce1087 1 COG4907 COG4907, Predicted membrane protein Function unknown 162453322 Common argG hypothetical protein sce5046 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 162448654 Common thiL Thiamine-phosphate kinase sce0384 12 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 162453170 Common uptA 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase sce4894 92 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 162454438 Nonpathogen - hypothetical protein sce6158 1 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 162451738 Common - putative secreted protein sce3465 5 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162456792 Common - probable type I restriction-modification system,M subunit sce8509 104 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 162448404 Common - alcohol dehydrogenase, zinc-containing sce0134 166 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162457110 Nonpathogen - put.Carbohydrate kinase, PfkB family sce8825 1 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 162455954 Common - hypothetical protein sce7672 14 COG4305 COG4305, Endoglucanase C-terminal domain/subunit and related proteins Carbohydrate transport and metabolism 162455747 Nonpathogen - putative monooxygenase sce7465 5 COG3748 COG3748, Predicted membrane protein Function unknown 162452602 Common - putative secreted protein sce4326 90 COG1430 COG1430, Uncharacterized conserved protein Function unknown 162452461 Common - putative RTX family exoprotein sce4185 37 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162450987 Common epi Methylmalonyl-CoA epimerase sce2715 85 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 162452095 Common pyrB hypothetical protein sce3822 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 162456213 Common - Fe-S oxidoreductase sce7930 56 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 162451969 Common - putative ABC transport system permease protein sce3696 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 162452928 Common - putative transposase sce4652 27 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162448772 Common copB copper tolerance protein sce0502 19 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162454956 Nonpathogen - hypothetical protein sce6674 1 None None None 162456450 Common clpB2 ATPase with chaperone activity, two ATP-bindingdomains sce8167 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162451348 Nonpathogen - hypothetical protein sce3076 1 None None None 162454366 Nonpathogen - ECF-family RNA polymerase sigma factor sce6089 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457302 Common - Protein kinase sce9017 128 COG3899 COG3899, Predicted ATPase General function prediction only 162448942 Nonpathogen - hypothetical protein sce0672 1 None None None 162457612 Common - Protein kinase sce9326 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455216 Common prsA2 Ribose-phosphate diphosphokinase sce6934 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 162450509 Nonpathogen - hypothetical protein sce2237 1 None None None 162451213 Common moaE probably molybdopterin-converting factor chain 2 sce2941 158 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 162454732 Nonpathogen - putative DNA binding protein sce6450 1 COG4103 COG4103, Uncharacterized protein conserved in bacteria Function unknown 162451306 Common xynA1 Endo-1,4-beta-xylanase sce3034 12 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 162452688 Common - putative simple sugar transport system permease protein sce4412 101 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 162455896 Nonpathogen - hypothetical protein sce7614 1 None None None 162457033 Nonpathogen - hypothetical protein sce8748 1 None None None 162452986 Common - mutT/nudix family protein sce4710 86 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162455797 Common - hypothetical protein sce7515 11 None None None 162450202 Common mnhG Na+/H+ antiporter sce1930 89 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 162452858 Nonpathogen - hypothetical protein sce4582 1 None None None 162448345 Nonpathogen - hypothetical protein sce0076 1 None None None 162457020 Nonpathogen - hypothetical protein sce8735 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162450559 Common astR sulfate ester binding protein (ABC superfamily,peri_bind) sce2287 61 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162455466 Nonpathogen - hypothetical protein sce7184 1 None None None 162453547 Common fadD2 long-chain fatty-acid-CoA ligase sce5271 218 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 162450740 Common - hypothetical protein sce2468 45 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 162455230 Common prkA2 Protein kinase sce6948 71 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 162451510 Common - hypothetical protein sce3238 21 None None None 162456616 Common proB hypothetical protein sce8333 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 162450816 Nonpathogen - hypothetical protein sce2544 1 None None None 162453000 Nonpathogen - hypothetical protein sce4724 1 None None None 162455604 Common - hypothetical protein sce7322 42 COG5360 COG5360, Uncharacterized protein conserved in bacteria Function unknown 162456078 Nonpathogen - putative secreted protein sce7796 1 None None None 162450576 Nonpathogen - hypothetical protein sce2304 1 None None None 162452803 Common - hypothetical protein sce4527 2 None None None 162457513 Common - transcriptional regulator, TetR family sce9227 25 COG1309 AcrR, Transcriptional regulator Transcription 162453701 Common - LysR-family transcriptional regulator sce5425 163 COG0583 LysR, Transcriptional regulator Transcription 162452167 Common - hypothetical protein sce3894 8 None None None 162456131 Common - permease of the major facilitator superfamily sce7848 148 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162457518 Nonpathogen - hypothetical protein sce9232 4 None None None 162456498 Common - put. Sugar isomerase domain containing protein sce8215 131 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 162450540 Common - hypothetical protein sce2268 7 None None None 162456448 Common recF RecF protein sce8165 161 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 162449887 Common - TPR domain protein sce1616 85 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 162453238 Nonpathogen - hypothetical protein sce4962 3 None None None 162454967 Common - SDR family short chain oxidoreductase sce6685 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162455034 Common - hypothetical protein sce6752 8 None None None 162449150 Common - putative anti-sigma factor antagonist sce0880 72 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162455362 Nonpathogen - hypothetical protein sce7080 1 None None None 162456436 Nonpathogen - hypothetical protein sce8153 4 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453065 Common - hypothetical protein sce4789 40 COG3002 COG3002, Uncharacterized protein conserved in bacteria Function unknown 162448625 Nonpathogen - hypothetical protein sce0355 1 None None None 162452535 Common - hypothetical protein sce4259 30 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162449300 Common - glycosyltransferase sce1030 18 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162448329 Common - Protein kinase sce0060 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456345 Common truA tRNA pseudouridine synthase A sce8062 233 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 162452522 Common - hypothetical protein sce4246 186 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162451973 Nonpathogen - putative carbohydrate-binding protein, Rhs family sce3700 1 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162449800 Common - hypothetical protein sce1529 23 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 162449461 Nonpathogen - Glutathione transferase sce1191 6 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162456319 Common - hypothetical protein sce8036 62 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450414 Common - ABC transporter, periplasmic-substrate binding protein, putative sce2142 4 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 162451079 Nonpathogen - hypothetical protein sce2807 1 None None None 162448856 Common crtE Farnesyltranstransferase sce0586 239 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 162452405 Nonpathogen - hypothetical protein sce4129 1 None None None 162449381 Common lolC Lipoprotein releasing system transmembrane protein lolC sce1111 213 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162456219 Common rpoA DNA-directed RNA polymerase, alpha subunit sce7936 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 162448762 Nonpathogen - hypothetical protein sce0492 1 None None None 162451919 Common - hypothetical protein sce3646 183 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162454813 Nonpathogen - hypothetical protein sce6531 1 None None None 162456114 Common pheA3 Chorismate mutase sce7831 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 162455708 Nonpathogen - hypothetical protein sce7426 1 None None None 162457119 Common - hypothetical protein sce8834 11 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162452136 Nonpathogen - hypothetical protein sce3863 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162452993 Common - MoxR like ATPase sce4717 42 COG0714 COG0714, MoxR-like ATPases General function prediction only 162453749 Common pacL2 cation-transporting ATPase, E1-E2 family sce5473 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 162448921 Nonpathogen - putative tonB-like protein sce0651 1 None None None 162453301 Common - DUF829 domain hypothetical protein sce5025 22 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162457602 Nonpathogen - hypothetical protein sce9316 1 None None None 162454318 Common - ABC transporter, ATP-binding protein sce6041 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162451045 Common - transcriptional regulator, LysR family sce2773 161 COG0583 LysR, Transcriptional regulator Transcription 162456501 Nonpathogen - hypothetical protein sce8218 2 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162451208 Nonpathogen - hypothetical protein sce2936 1 None None None 162450952 Nonpathogen - hypothetical protein sce2680 1 None None None 162451543 Common - put. Phosphoglycerate mutase sce3271 73 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 162456354 Common - hypothetical protein sce8071 28 None None None 162452387 Common - conserved exported carbohydrate-binding protein,Rhs family sce4111 65 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162454826 Nonpathogen - hypothetical protein sce6544 1 None None None 162457422 Common - Vitamin K-dependent gamma-carboxylase sce9136 7 None None None 162450692 Common - Hsp70 heat shock protein sce2420 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162449712 Common - putative nucleotide-binding protein sce1441 25 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162454395 Common - LysR-family transcriptional regulator sce6116 165 COG0583 LysR, Transcriptional regulator Transcription 162454449 Common metB1 Cystathionine gamma-synthase sce6169 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 162449162 Nonpathogen - hypothetical protein sce0892 1 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 162449479 Nonpathogen - hypothetical protein sce1209 1 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 162457653 Nonpathogen - hypothetical protein sce9367 1 None None None 162449042 Common - hypothetical protein sce0772 75 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 162455227 Nonpathogen - ATP binding protein sce6945 5 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 162457620 Common - hypothetical protein sce9334 12 None None None 162449616 Common - response regulator sce1345 163 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162450283 Common - hypothetical protein sce2011 79 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162452380 Nonpathogen - hypothetical protein sce4104 1 None None None 162452441 Nonpathogen - hypothetical protein sce4165 1 None None None 162453413 Common - hypothetical protein sce5137 16 COG3930 COG3930, Uncharacterized protein conserved in bacteria Function unknown 162455206 Common - Protein kinase sce6924 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455562 Nonpathogen - hypothetical protein sce7280 8 None None None 162450598 Common - Protein kinase sce2326 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453403 Nonpathogen - hypothetical protein sce5127 1 None None None 162455524 Nonpathogen - hypothetical protein sce7242 1 None None None 162455717 Nonpathogen - hypothetical protein sce7435 1 None None None 162451184 Nonpathogen - hypothetical protein sce2912 2 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 162455398 Nonpathogen - hypothetical protein sce7116 1 None None None 162449770 Nonpathogen - putative secreted protein sce1499 6 None None None 162452505 Common - putative exonuclease sce4229 16 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 162455329 Nonpathogen - hypothetical protein sce7047 1 None None None 162456112 Nonpathogen - hypothetical protein sce7829 1 None None None 162453442 Common - two component response regulator sce5166 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449431 Common topI DNA topoisomerase, type I, putative sce1161 45 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 162455115 Common - hypothetical protein sce6833 68 COG2128 COG2128, Uncharacterized conserved protein Function unknown 162456484 Common - hypothetical protein sce8201 2 None None None 162453361 Common fhp putative flavohemoprotein sce5085 63 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 162449074 Nonpathogen - hypothetical protein sce0804 1 None None None 162449972 Nonpathogen - hypothetical protein sce1701 4 None None None 162457586 Common - Dehydrogenases with different specificities (related to short-chain sce9300 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162453254 Common - Oxidoreductase sce4978 211 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162449186 Common - hypothetical protein sce0916 13 COG4762 COG4762, Uncharacterized protein conserved in bacteria Function unknown 162457053 Nonpathogen - hypothetical protein sce8768 1 None None None 162452150 Nonpathogen - putative secreted protein sce3877 1 None None None 162449525 Common - cytochrome C sce1255 10 None None None 162455246 Common - sensor histidine kinase sce6964 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453780 Common - hypothetical protein sce5504 144 COG0344 COG0344, Predicted membrane protein Function unknown 162456024 Nonpathogen - hypothetical protein sce7742 1 None None None 162452549 Nonpathogen pilA1 fimbrial protein pilA sce4273 1 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 162452751 Nonpathogen - Hypothetical protein ZK84.1 sce4475 4 COG5373 COG5373, Predicted membrane protein Function unknown 162451486 Common - transcriptional regulator, TetR family sce3214 31 COG1309 AcrR, Transcriptional regulator Transcription 162454889 Nonpathogen - putative secreted protein sce6607 1 None None None 162450713 Common - omp A family outer membrane protein sce2441 171 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452293 Nonpathogen - hypothetical protein sce4019 1 None None None 162455175 Nonpathogen - hypothetical protein sce6893 1 COG0400 COG0400, Predicted esterase General function prediction only 162449068 Common - multicopper oxidase sce0798 137 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162451819 Common gnd1 Phosphogluconate dehydrogenase sce3546 185 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 162453314 Common - hypothetical protein sce5038 5 None None None 162450885 Nonpathogen - hypothetical protein sce2613 4 None None None 162449139 Common - hypothetical protein sce0869 9 None None None 162455478 Common - cAMP binding protein sce7196 102 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162448386 Common - putative amidase sce0116 209 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162457184 Common - DNA-binding protein sce8899 62 COG1476 COG1476, Predicted transcriptional regulators Transcription 162453073 Common hycE NAD-dependent dehydrogenase subunit sce4797 192 COG3261 HycE, Ni,Fe-hydrogenase III large subunit Energy production and conversion 162455292 Common - hypothetical protein sce7010 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162449329 Nonpathogen - hypothetical protein sce1059 1 None None None 162448814 Nonpathogen - hypothetical protein sce0544 1 None None None 162454324 Common - Protein kinase sce6047 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455025 Common - Protein kinase sce6743 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450028 Nonpathogen - hypothetical protein sce1757 2 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162452373 Nonpathogen - hypothetical protein sce4097 6 None None None 162454215 Nonpathogen - hypothetical protein sce5938 2 None None None 162452424 Nonpathogen - hypothetical protein sce4148 2 None None None 162456975 Nonpathogen - hypothetical protein sce8691 1 None None None 162451640 Common - hypothetical protein sce3368 37 COG4279 COG4279, Uncharacterized conserved protein Function unknown 162455576 Common traM SAM-dependent methyltransferases sce7294 162 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 162453983 Nonpathogen - DnaJ-class molecular chaperone sce5707 2 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162452617 Common - hypothetical protein sce4341 139 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 162450384 Nonpathogen - hypothetical protein sce2112 1 None None None 162452923 Common - hypothetical protein sce4647 11 None None None 162449979 Nonpathogen - hypothetical protein sce1708 2 None None None 162450019 Common hrpB ATP-dependent RNA helicase sce1748 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 162456323 Nonpathogen - hypothetical protein sce8040 1 None None None 162454717 Nonpathogen - Smr family protein sce6435 4 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 162456199 Common - hypothetical protein sce7916 8 None None None 162450312 Common pp2c2 Phosphoprotein phosphatase sce2040 136 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162454295 Common - Protein kinase sce6018 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456138 Nonpathogen - hypothetical protein sce7855 2 None None None 162448897 Nonpathogen - hypothetical protein sce0627 1 None None None 162456668 Common - hypothetical protein sce8385 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 162448468 Nonpathogen - hypothetical protein sce0198 1 None None None 162450207 Common mnhB Na+/H+ antiporter sce1935 50 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 162453164 Common - probable glycolipid synthase sce4888 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162453455 Nonpathogen - hypothetical protein sce5179 1 COG3207 DIT1, Pyoverdine/dityrosine biosynthesis protein Secondary metabolites biosynthesis, transport, and catabolism 162448485 Common cobM Precorrin-3B C(17)-methyltransferase sce0215 202 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 162450943 Nonpathogen - hypothetical protein sce2671 1 None None None 162451958 Common - 3-deoxy-7-phosphoheptulonate synthase sce3685 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 162450644 Nonpathogen - hypothetical protein sce2372 3 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162457007 Common - two-component response regulator sce8723 129 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457556 Nonpathogen - hypothetical protein sce9270 1 None None None 162450835 Nonpathogen - putative ABC transporter ATP-binding protein sce2563 7 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162456456 Common ccmF cytochrome c-type biogenesis protein sce8173 149 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 162455751 Common - hypothetical protein sce7469 10 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162454329 Common - hypothetical protein sce6052 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 162448769 Common - probable protease sce0499 24 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 162454890 Common - hypothetical protein sce6608 6 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162450893 Common huyB N-methylhydantoinase B, alpha subunit sce2621 94 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162452159 Common mxcH probable TonB-dependent receptor sce3886 95 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162452406 Nonpathogen - hypothetical protein sce4130 1 None None None 162449182 Common - hypothetical calcium-binding protein sce0912 54 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162451125 Common - Acyl-CoA dehydrogenase sce2853 164 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162454292 Common ilvE3 Branched-chain-amino-acid transaminase sce6015 198 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 162449980 Nonpathogen - putative secreted proline rich protein sce1709 1 COG5373 COG5373, Predicted membrane protein Function unknown 162448506 Common cobI Precorrin-2-C20-methyltransferase sce0236 175 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 162454882 Common - leucine-rich protein sce6600 13 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 162453664 Common - hypothetical protein sce5388 70 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 162454132 Common - hypothetical protein sce5856 10 COG2846 COG2846, Regulator of cell morphogenesis and NO signaling Cell division and chromosome partitioning 162452397 Common - cytosine/adenosine deaminase sce4121 180 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 162451615 Nonpathogen - Hypothetical protein AQ_1349. sce3343 1 COG3766 COG3766, Predicted membrane protein Function unknown 162450001 Common - hypothetical protein sce1730 150 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162451287 Common menE o-succinylbenzoate-CoA ligase sce3015 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162455982 Common - hypothetical protein sce7700 43 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 162456651 Nonpathogen - hypothetical protein sce8368 1 None None None 162456380 Common - outer membrane efflux protein sce8097 20 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162451985 Common - putative Nicotinate phosphoribosyltransferase sce3712 116 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 162456376 Common - putative oxidoreductase sce8093 231 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162453483 Common - Protein kinase sce5207 99 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450629 Nonpathogen - hypothetical protein sce2357 3 None None None 162457427 Common sucD Succinate--CoA ligase (ADP-forming) sce9141 212 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 162450865 Nonpathogen - hypothetical protein sce2593 1 None None None 162452017 Nonpathogen - hypothetical protein sce3744 1 None None None 162454452 Common rrf hypothetical protein sce6172 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 162450727 Common - putative NADH dehydrogenase sce2455 26 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 162452950 Common - Protein kinase sce4674 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450375 Nonpathogen - hypothetical protein sce2103 2 None None None 162456032 Nonpathogen - hypothetical protein sce7750 1 None None None 162449518 Nonpathogen - Putative feruloyl esterase B precursor sce1248 1 None None None 162453788 Common - ABC transport system substrate-binding protein sce5512 85 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162450364 Nonpathogen - hypothetical protein sce2092 11 None None None 162454421 Nonpathogen - hypothetical protein sce6141 1 None None None 162451295 Nonpathogen - hypothetical protein sce3023 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162449278 Common - putative transport protein sce1008 53 COG2985 COG2985, Predicted permease General function prediction only 162456720 Nonpathogen - hypothetical protein sce8437 1 None None None 162449320 Common mdh Malate dehydrogenase sce1050 193 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 162450177 Nonpathogen - hypothetical protein sce1906 1 None None None 162452251 Common - hypothetical protein sce3978 9 None None None 162453493 Nonpathogen - hypothetical protein sce5217 1 None None None 162454013 Common - hypothetical protein sce5737 62 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 162453415 Common - Protein kinase sce5139 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452037 Common - Carbohydrate kinase, PfkB family sce3764 87 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 162452577 Common - peptide ABC transporter, permease protein sce4301 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162455781 Nonpathogen - hypothetical protein sce7499 1 None None None 162449592 Common - ABC transporter substrate-binding protein sce1321 78 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162455141 Nonpathogen - hypothetical protein sce6859 1 None None None 162455438 Common rtcB rtcb protein sce7156 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 162455758 Nonpathogen - hypothetical protein sce7476 1 None None None 162457079 Nonpathogen - hypothetical protein sce8794 1 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 162449212 Nonpathogen - hypothetical protein sce0942 1 COG3339 COG3339, Uncharacterized conserved protein Function unknown 162450185 Common - RNA-directed DNA polymerase sce1914 40 None None None 162457244 Common - putative monooxygenase sce8959 72 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162454352 Nonpathogen - hypothetical protein sce6075 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162456075 Common yhdJ Site-specific DNA-methyxltransferase (adenine-specific) sce7793 21 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 162454226 Nonpathogen - hypothetical protein sce5949 4 COG3215 PilZ, Tfp pilus assembly protein PilZ Cell motility and secretion / Intracellular trafficking and secretion 162454447 Nonpathogen - hypothetical protein sce6167 1 None None None 162454553 Nonpathogen - hypothetical protein sce6273 3 None None None 162449788 Nonpathogen - hypothetical protein sce1517 1 None None None 162456572 Common - putative secreted protein sce8289 44 COG4805 COG4805, Uncharacterized protein conserved in bacteria Function unknown 162449293 Nonpathogen - hypothetical protein sce1023 1 None None None 162455666 Nonpathogen - hypothetical protein sce7384 1 None None None 162457087 Common - probable transaminase protein sce8802 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 162454044 Common - Nitrogen regulatory IIA protein homolog sce5768 130 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 162453806 Nonpathogen - hypothetical protein sce5530 1 None None None 162451873 Common - enzyme with glycosyltransferase and SAM-binding domains sce3600 157 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162456467 Common - conserved hypothetical protein UPF0001 sce8184 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 162453337 Common gltD Glutamate synthase (NADPH) sce5061 196 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 162457483 Common - Protein kinase sce9197 134 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453161 Common cyc3 Cytochrome P450 CYP263A1 sce4885 79 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162456980 Common - putative long-chain fatty-acid--CoA ligase sce8696 217 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 162457522 Common - putative secreted protein sce9236 26 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162448739 Common - Protein kinase sce0469 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451938 Common - putative transcriptional regulator (DeoR family) sce3665 75 COG2378 COG2378, Predicted transcriptional regulator Transcription 162453174 Common mhpT permease of the major facilitator superfamily,putative 3-hydroxyphenylpropionate transporter sce4898 118 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162451135 Nonpathogen - hypothetical protein sce2863 1 None None None 162456042 Common - probable cytochrome oxidase (cbb3-type) sce7760 15 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 162455766 Nonpathogen - putative exported glycine-rich protein sce7484 1 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162454828 Common cfa2 cyclopropane-fatty-acyl-phospholipid synthase sce6546 128 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 162456717 Common - two-component hybrid sensor and regulator sce8434 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451481 Common - WD-40 repeat protein sce3209 36 COG4249 COG4249, Uncharacterized protein containing caspase domain General function prediction only 162454503 Common - putative Alcohol dehydrogenase sce6223 176 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162454845 Common - hypothetical protein sce6563 205 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 162453534 Nonpathogen - hypothetical protein sce5258 1 None None None 162451431 Common rluD2 Pseudouridylate synthase/ribosomal large subunit pseudouridine synthase D sce3159 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 162449684 Common otsB Trehalose-phosphatase sce1413 70 COG1877 OtsB, Trehalose-6-phosphatase Carbohydrate transport and metabolism 162457546 Nonpathogen - hypothetical protein sce9260 1 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162456041 Nonpathogen - hypothetical protein sce7759 1 None None None 162455076 Common - Nucleotidyltransferase sce6794 21 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 162456225 Common adk Adenylate kinase sce7942 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 162453312 Nonpathogen - hypothetical protein sce5036 1 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162456591 Common sdhA2 Succinate dehydrogenase sce8308 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 162456579 Common - Probable Anion-transporting ATPase sce8296 27 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 162455142 Common - transposase sce6860 108 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455602 Nonpathogen - hypothetical protein sce7320 2 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162454267 Nonpathogen - hypothetical protein sce5990 1 None None None 162453489 Nonpathogen - hypothetical protein sce5213 3 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 162454519 Common - conserved hypothetical protein / putative transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs sce6239 50 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162454165 Common - hypothetical protein sce5889 10 COG4907 COG4907, Predicted membrane protein Function unknown 162449904 Common prfB1 peptide chain release factor 2 sce1633 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 162448413 Common - hypothetical protein sce0143 5 None None None 162449623 Common kdpA Potassium-transporting ATPase A chain sce1352 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 162456341 Nonpathogen - hypothetical protein sce8058 1 None None None 162457229 Common - hypothetical protein sce8944 16 None None None 162451709 Nonpathogen - putative secreted protein sce3437 1 None None None 162452264 Common - hypothetical protein sce3992 70 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455953 Common - (S)-2-hydroxy-acid oxidase. sce7671 113 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 162450087 Nonpathogen - hypothetical protein sce1816 7 None None None 162451642 Nonpathogen - hypothetical protein sce3370 5 None None None 162450914 Common - hypothetical protein sce2642 24 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162449298 Common - glycosyltransferase sce1028 185 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162454726 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase sce6444 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 162455169 Nonpathogen - hypothetical protein sce6887 1 None None None 162454050 Common - two-component sensor histidine kinase sce5774 218 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162457120 Nonpathogen - hypothetical protein sce8835 2 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 162453277 Nonpathogen - hypothetical protein sce5001 2 COG4907 COG4907, Predicted membrane protein Function unknown 162452562 Common - hypothetical protein sce4286 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 162448340 Common sodA hypothetical protein sce0071 174 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 162453874 Common - Protein kinase sce5598 126 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457440 Common speB2 Agmatinase sce9154 157 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 162454405 Nonpathogen - hypothetical protein sce6126 1 None None None 162454576 Nonpathogen - hypothetical protein sce6296 1 None None None 162452648 Nonpathogen - hypothetical protein sce4372 4 None None None 162452480 Common - Geranyltranstransferase sce4204 228 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 162448356 Common leuC1 Isopropylmalate isomerase, large subunit sce0086 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 162452117 Nonpathogen - hypothetical protein sce3844 2 None None None 162448292 Common - hypothetical protein sce0023 25 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 162448473 Nonpathogen - hypothetical protein sce0203 1 None None None 162450805 Common - putative ABC-2 type transport system permease protein sce2533 86 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 162454983 Nonpathogen - hypothetical membrane protein sce6701 1 None None None 162450347 Nonpathogen - putative secreted protein sce2075 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451680 Nonpathogen - hypothetical protein sce3408 1 None None None 162457040 Common ilvG2 Acetolactate synthase sce8755 219 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 162457622 Common - hypothetical protein sce9336 22 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162452636 Common - hypothetical protein sce4360 12 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162454879 Common - related S23 ribosomal protein sce6597 7 None None None 162454880 Common - hypothetical protein sce6598 37 None None None 162454700 Nonpathogen - hypothetical protein sce6420 1 None None None 162455054 Common - sugar nucleotide epimerase sce6772 225 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 162457127 Common - Hypothetical protein T07A9.5a sce8842 18 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 162456633 Nonpathogen - hypothetical protein sce8350 3 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162451074 Common lhr1 putative ATP-dependent helicase, N-terminal fragment sce2802 207 COG1201 Lhr, Lhr-like helicases General function prediction only 162455443 Nonpathogen - hypothetical protein sce7161 3 None None None 162449586 Common - hypothetical phosphotransferase sce1315 11 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 162452345 Common - hypothetical protein sce4069 189 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162452415 Common - hypothetical protein sce4139 30 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162455728 Common - hypothetical protein sce7446 24 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162455929 Nonpathogen - putative secreted protein sce7647 11 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 162448899 Common - RNA polymerase sigma factor sce0629 3 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 162451092 Common - Hypothetical 27.5 kDa protein in SPO1-SIS1 intergenic region. sce2820 11 COG4359 COG4359, Uncharacterized conserved protein Function unknown 162454187 Common - GroES-like protein sce5910 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 162454141 Common pfk hypothetical protein sce5865 159 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 162456233 Common - Ribosomal protein S14, probable sce7950 200 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 162457354 Common - hypothetical protein sce9069 7 None None None 162451812 Common - hypothetical protein sce3539 11 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 162448963 Common bioA Adenosylmethionine--8-amino-7-oxononanoate transaminase sce0693 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 162456826 Nonpathogen - hypothetical protein sce8543 6 None None None 162451227 Common - two-component response regulator sce2955 126 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 162457173 Nonpathogen - hypothetical protein sce8888 1 None None None 162452089 Common fabD3 Malonyl CoA-acyl carrier protein transacylase sce3816 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 162456150 Common - Cytochrome P450 CYP124E1 sce7867 81 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162453379 Nonpathogen - hypothetical protein sce5103 1 None None None 162454709 Common - Protein kinase sce6427 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448874 Common - putative acteyltransferase sce0604 20 COG0456 RimI, Acetyltransferases General function prediction only 162454067 Common - sigma-54 dependent DNA-binding response regulator sce5791 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162448822 Common - putative secreted protein sce0552 11 COG4245 TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain General function prediction only 162449269 Nonpathogen - hypothetical protein sce0999 1 None None None 162451666 Nonpathogen - hypothetical protein sce3394 1 None None None 162454033 Common cysK6 hypothetical protein sce5757 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162454630 Common - Vitelline membrane outer layer protein I-like Hypothetical protein sce6350 2 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 162449856 Nonpathogen - hypothetical protein sce1585 1 None None None 162456331 Common - hypothetical protein sce8048 147 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162456511 Nonpathogen - hypothetical protein sce8228 2 None None None 162451654 Common - tra sce3382 87 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454566 Nonpathogen - hypothetical protein sce6286 1 None None None 162451606 Common - hypothetical protein sce3334 58 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 162451758 Common - hypothetical protein sce3485 73 COG2898 COG2898, Uncharacterized conserved protein Function unknown 162451555 Nonpathogen - hypothetical protein sce3283 1 None None None 162453436 Common - anti-anti sigma factor protein sce5160 88 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162456546 Common - tonB family protein sce8263 95 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162453182 Nonpathogen - hypothetical protein sce4906 2 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 162455999 Nonpathogen - hypothetical protein sce7717 1 None None None 162453883 Nonpathogen - hypothetical protein sce5607 1 None None None 162456727 Nonpathogen - hypothetical protein sce8444 1 None None None 162452403 Nonpathogen - hypothetical protein sce4127 4 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162452304 Common rbsB1 Ribose transporter, periplasmic binding protein sce4030 97 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162456750 Common tkt2 hypothetical protein sce8467 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 162450934 Common cheR4 Chemotaxis response regulator sce2662 199 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 162453828 Nonpathogen - Putative PE-PGRS family protein sce5552 2 COG4907 COG4907, Predicted membrane protein Function unknown 162451380 Nonpathogen - hypothetical protein sce3108 2 None None None 162455090 Common - transposase, IS4 family sce6808 27 None None None 162455889 Common - putative membrane protein with TM2 domain sce7607 14 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162449083 Common - transglutaminase-like enzymes, putative cysteine proteases sce0813 82 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162450023 Common - transcription regulator Fur family homolog sce1752 68 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 162451003 Nonpathogen - hypothetical protein sce2731 1 None None None 162450453 Nonpathogen - hypothetical protein sce2181 1 None None None 162456161 Nonpathogen - hypothetical protein sce7878 3 None None None 162450476 Common cheD putative chemotaxis protein CheD sce2204 87 COG1871 CheD, Chemotaxis protein; stimulates methylation of MCP proteins Cell motility and secretion / Signal transduction mechanisms 162455920 Nonpathogen - hypothetical protein sce7638 1 COG3815 COG3815, Predicted membrane protein Function unknown 162448955 Nonpathogen - hypothetical protein sce0685 1 None None None 162449175 Common - putative peroxiredoxin 2 family protein/glutaredoxin sce0905 103 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162454936 Nonpathogen - hypothetical protein sce6654 1 None None None 162452458 Nonpathogen - hypothetical protein sce4182 1 None None None 162454601 Common - anti-anti sigma factor protein sce6321 38 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162452213 Common - sensory box histidine kinase/response regulator hybrid sce3940 213 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162454306 Common - putative aminopeptidase sce6029 159 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 162454180 Nonpathogen - hypothetical protein sce5903 12 None None None 162452036 Common mtaP 5'-methyl-5-thioadenosine phosphorylase sce3763 159 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 162449089 Common - polyketide synthase sce0819 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162449573 Nonpathogen - hypothetical protein sce1302 3 None None None 162457339 Common - RNA polymerase sigma factor rpoD sce9054 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162453154 Common - two-component response regulator sce4878 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162457286 Common - hypothetical protein sce9001 30 COG2516 COG2516, Biotin synthase-related enzyme General function prediction only 162451049 Common dam site-specific DNA-methyltransferase sce2777 102 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 162454375 Common - transposase sce6098 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162453458 Common - hypothetical protein sce5182 25 COG0778 NfnB, Nitroreductase Energy production and conversion 162451943 Nonpathogen - hypothetical protein sce3670 1 None None None 162455569 Nonpathogen - hypothetical protein sce7287 1 COG5373 COG5373, Predicted membrane protein Function unknown 162454523 Nonpathogen - hypothetical protein sce6243 1 None None None 162452026 Nonpathogen - hypothetical protein sce3753 2 None None None 162452186 Common - Protein kinase sce3913 95 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452126 Common marR transcriptional regulator, MarR family sce3853 18 COG1846 MarR, Transcriptional regulators Transcription 162452334 Common - hypothetical protein sce4060 20 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 162454548 Common - hypothetical protein sce6268 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 162448866 Common - transcriptional regulatory protein, Sir2 family sce0596 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 162450073 Nonpathogen - hypothetical protein sce1802 3 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 162454160 Nonpathogen - hypothetical protein sce5884 1 None None None 162456789 Nonpathogen - hypothetical protein sce8506 1 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 162457202 Common capK2 putative capK related-protein sce8917 114 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 162448611 Nonpathogen - hypothetical protein sce0341 4 None None None 162448458 Common - hypothetical protein sce0188 17 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162456809 Nonpathogen - hypothetical protein sce8526 1 None None None 162452196 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein sce3923 170 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 162456212 Common - sensor histidine kinase sce7929 219 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162450216 Nonpathogen - hypothetical protein sce1944 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162450699 Nonpathogen - hypothetical protein sce2427 1 None None None 162450693 Nonpathogen - no similarity sce2421 3 None None None 162454970 Nonpathogen - glycosyltransferase sce6688 1 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162457166 Nonpathogen - putative secreted protein sce8881 4 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162449102 Nonpathogen - hypothetical protein sce0832 1 None None None 162454901 Nonpathogen - transposase sce6619 1 None None None 162450137 Common - put. Glucosyltransferase sce1866 39 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 162452722 Common dnaG DNA primase sce4446 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 162453066 Common - putative sulfate transporter, SulP family sce4790 162 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 162449960 Common - hypothetical protein sce1689 159 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455099 Common - hypothetical protein sce6817 62 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162450153 Common - putative secreted hydrolase sce1882 147 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162452476 Common - cation efflux protein sce4200 189 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 162451889 Nonpathogen - hypothetical protein sce3616 1 None None None 162454205 Common sixA1 Phosphohistidine phosphatase sce5928 80 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 162456946 Nonpathogen - hypothetical protein sce8663 6 None None None 162448347 Common - ATP-dependent deoxyribonuclease subunit A sce0078 131 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 162456153 Nonpathogen - hypothetical protein sce7870 1 None None None 162452856 Common hypD Hydrogenase expression/formation protein hypD2. sce4580 109 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 162448890 Common - Probable anthranilate synthase component I sce0620 106 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 162450255 Nonpathogen - hypothetical protein sce1983 1 None None None 162453880 Nonpathogen - hypothetical protein sce5604 1 None None None 162452430 Common - Probable serine protease sce4154 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162457474 Common - hypothetical protein sce9188 9 COG3652 COG3652, Predicted outer membrane protein Function unknown 162451214 Common phoU phosphate transport system regulatory protein PhoU sce2942 199 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 162456270 Nonpathogen - hypothetical protein sce7986 3 None None None 162451497 Common - putatvie Dehydrogenase sce3225 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162452839 Common - hypothetical protein sce4563 7 COG2044 COG2044, Predicted peroxiredoxins General function prediction only 162456391 Common - sensor histidine kinase sce8108 222 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162449634 Nonpathogen - hypothetical protein sce1363 15 None None None 162449496 Common cheA2 chemotaxis protein CheA sce1226 155 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162451220 Common phoB Phosphate regulon transcriptional regulatory protein phoB. sce2948 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162453637 Common - Putative oxidoreductase sce5361 174 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 162448797 Common nuoH NADH dehydrogenase (ubiquinone) sce0527 181 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 162454626 Nonpathogen - hypothetical protein sce6346 2 None None None 162451629 Nonpathogen - hypothetical protein sce3357 4 None None None 162449754 Common - permease of the major facilitator superfamily sce1483 204 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162454928 Nonpathogen - hypothetical protein sce6646 1 None None None 162449554 Common - Integrase-like protein sce1283 35 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162450276 Common - Dihydrolipoyl dehydrogenase sce2004 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 162455013 Common - hypothetical protein sce6731 41 COG1656 COG1656, Uncharacterized conserved protein Function unknown 162455146 Common - hypothetical protein sce6863 43 COG2846 COG2846, Regulator of cell morphogenesis and NO signaling Cell division and chromosome partitioning 162453836 Common - general secretion pathway protein A fragment sce5560 19 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 162453057 Nonpathogen - hypothetical protein sce4781 1 None None None 162455286 Common dys hypothetical protein sce7004 20 COG1899 DYS1, Deoxyhypusine synthase Posttranslational modification, protein turnover, chaperones 162452554 Nonpathogen - hypothetical protein sce4278 2 COG5373 COG5373, Predicted membrane protein Function unknown 162457319 Common - hypothetical protein sce9034 88 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 162454059 Common - putative exported endopeptidase sce5783 19 COG3770 MepA, Murein endopeptidase Cell envelope biogenesis, outer membrane 162450199 Nonpathogen - hypothetical protein sce1927 1 None None None 162450288 Common - putative pilin biogenesis protein sce2016 27 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 162448607 Common - oxidoreductase, short chain dehydrogenase/reductase family sce0337 225 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162456010 Nonpathogen - hypothetical protein sce7728 1 None None None 162454191 Nonpathogen - hypothetical protein sce5914 2 COG5038 COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain General function prediction only 162449923 Common tgt Queuine tRNA-ribosyltransferase sce1652 230 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 162450447 Common - PE_PGRS family protein sce2175 8 None None None 162451054 Common - hypothetical protein sce2782 78 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162454009 Common - hypothetical protein sce5733 74 COG1801 COG1801, Uncharacterized conserved protein Function unknown 162453469 Common - hypothetical protein sce5193 43 COG0439 AccC, Biotin carboxylase Lipid metabolism 162449402 Common - regulator protein, FUR family sce1132 189 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 162451488 Nonpathogen - hypothetical protein sce3216 2 None None None 162449014 Nonpathogen - hypothetical protein sce0744 1 COG2127 COG2127, Uncharacterized conserved protein Function unknown 162449753 Common - hypothetical protein sce1482 10 None None None 162450172 Nonpathogen - putative transposase sce1901 7 None None None 162454739 Nonpathogen - hypothetical protein sce6457 1 COG4907 COG4907, Predicted membrane protein Function unknown 162454690 Common - hypothetical protein sce6410 4 None None None 162456964 Common - ECF-family RNA polymerase sigma factor sce8680 169 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162449534 Common - hypothetical protein sce1263 29 COG3899 COG3899, Predicted ATPase General function prediction only 162454858 Nonpathogen - hypothetical protein sce6576 2 None None None 162456352 Nonpathogen - hypothetical protein sce8069 3 COG5373 COG5373, Predicted membrane protein Function unknown 162449112 Common rpsJ 30S ribosomal protein S10 sce0842 246 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 162450329 Common - Putative sphingosine kinase enzyme sce2057 10 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 162451284 Common menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase sce3012 152 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 162450093 Nonpathogen - hypothetical protein sce1822 1 None None None 162452868 Common abfB Alpha-L-arabinofuranosidase precursor sce4592 22 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162448433 Common - hypothetical protein sce0163 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 162450935 Nonpathogen - hypothetical protein sce2663 6 None None None 162450735 Common - hypothetical protein with FHA domain sce2463 72 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162452830 Nonpathogen - hypothetical protein sce4554 3 None None None 162451847 Nonpathogen - hypothetical protein sce3574 1 None None None 162449572 Common - glycosyltransferase sce1301 181 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162452272 Nonpathogen - hypothetical protein sce3999 1 None None None 162452669 Nonpathogen - hypothetical protein sce4393 2 None None None 162455553 Common - Transcriptional regulator sce7271 177 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162456566 Nonpathogen - hypothetical protein sce8283 1 None None None 162455898 Common - Adenylate cyclase sce7616 109 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 162457447 Common - Protein kinase sce9161 135 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457068 Common - hypothetical protein sce8783 97 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 162457596 Common - hypothetical protein sce9310 34 COG3759 COG3759, Predicted membrane protein Function unknown 162450145 Nonpathogen - hypothetical protein sce1874 1 None None None 162451760 Nonpathogen - hypothetical protein sce3487 6 None None None 162449606 Nonpathogen - hypothetical protein sce1335 5 None None None 162453291 Nonpathogen - hypothetical protein sce5015 6 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 162449522 Nonpathogen - hypothetical protein sce1252 1 None None None 162452356 Common - Pectinesterase 2 precursor sce4080 5 None None None 162455204 Nonpathogen - hypothetical protein sce6922 1 None None None 162454744 Nonpathogen - hypothetical protein sce6462 1 None None None 162455978 Common - predicted subtilisin like protease sce7696 32 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162449446 Common msbA5 ABC transporter family carbohydrate exporter sce1176 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162457197 Nonpathogen - transcriptional regulator, AraC family sce8912 1 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162448523 Common ilvE2 Branched-chain-amino-acid transaminase sce0253 177 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 162456168 Common - putative dehydrogenase sce7885 5 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162450032 Common idi hypothetical protein sce1761 81 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 162455412 Common - ECF-family RNA polymerase sigma factor sce7130 76 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448713 Common eriC chloride channel sce0443 141 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 162448989 Nonpathogen - hypothetical protein sce0719 1 None None None 162449455 Nonpathogen - hypothetical protein sce1185 1 None None None 162449664 Common - hypothetical protein sce1393 29 COG1714 COG1714, Predicted membrane protein/domain Function unknown 162456921 Common - probable cysteine desulfurase sce8638 229 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162457467 Nonpathogen - hypothetical protein sce9181 1 None None None 162453356 Common - hypothetical protein sce5080 104 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162449786 Common - Putative endopeptidase sce1515 13 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162452821 Common hisS hypothetical protein sce4545 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162452872 Common gfo Glucose--fructose oxidoreductase precursor sce4596 176 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 162457061 Nonpathogen - putative secreted protein sce8776 1 None None None 162455732 Nonpathogen - putative secreted protein sce7450 2 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162457462 Common - hypothetical protein sce9176 95 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 162451365 Common - hypothetical protein sce3093 59 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162455331 Common - hypothetical protein sce7049 26 COG4244 COG4244, Predicted membrane protein Function unknown 162450667 Common - putative cation-transporting ATPase sce2395 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 162450656 Common - putative hydrolase sce2384 171 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 162449147 Nonpathogen - hypothetical protein sce0877 1 None None None 162454359 Common hutH hypothetical protein sce6082 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 162449817 Nonpathogen - hypothetical protein sce1546 1 None None None 162456676 Common - Probable L-fucose isomerase sce8393 11 COG2407 FucI, L-fucose isomerase and related proteins Carbohydrate transport and metabolism 162449885 Common gcp putative glycoprotease sce1614 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 162453017 Common - hypothetical protein sce4741 36 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 162451395 Common - Protein kinase sce3123 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453846 Common - hypothetical protein sce5570 224 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 162451417 Nonpathogen - probable transcriptional regulator sce3145 1 None None None 162455214 Nonpathogen - hypothetical alanine-rich protein sce6932 1 COG3330 COG3330, Uncharacterized protein conserved in bacteria Function unknown 162450571 Common - Putative decarboxylase sce2299 108 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 162454856 Nonpathogen - hypothetical protein sce6574 1 None None None 162455420 Common - hypothetical protein sce7138 94 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452097 Common acpP4 putative acyl carrier protein sce3824 10 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162452969 Common - hypothetical protein sce4693 9 None None None 162456368 Common feoB ferrous iron transport protein B sce8085 162 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 162452551 Common pilA3 pilin sce4275 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 162449914 Nonpathogen - hypothetical protein sce1643 1 None None None 162454071 Common aat leucyl/phenylalanyl-tRNA--protein transferase sce5795 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 162449485 Nonpathogen - putative secreted protein sce1215 1 None None None 162451471 Nonpathogen - hypothetical protein sce3199 4 None None None 162457072 Common - anti-anti sigma factor protein sce8787 106 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162449365 Common - putative secreted protein sce1095 19 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162449231 Common sdeB putative chlorohydrolase sce0961 130 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 162455425 Nonpathogen - hypothetical protein sce7142 1 None None None 162457214 Common - hypothetical protein sce8929 35 None None None 162450813 Nonpathogen - hypothetical protein sce2541 1 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 162452324 Common - putative secreted protein sce4050 37 None None None 162452825 Nonpathogen - hypothetical protein sce4549 4 None None None 162452365 Nonpathogen - hypothetical protein sce4089 1 None None None 162453737 Common glgA3 glycogen synthase sce5461 219 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453503 Nonpathogen - putative secreted protein sce5227 1 None None None 162457346 Common nuoD2 NADH dehydrogenase (ubiquinone). sce9061 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 162457376 Nonpathogen - putative secreted protein sce9091 1 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 162454381 Nonpathogen - transposase sce6104 3 None None None 162452949 Nonpathogen - hypothetical protein sce4673 1 None None None 162452973 Common - Endonuclease/Exonuclease/phosphatase sce4697 20 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 162453014 Nonpathogen - hypothetical protein sce4738 2 None None None 162455820 Nonpathogen - hypothetical protein sce7538 1 None None None 162456004 Common - putative nitroreductase sce7722 82 COG0778 NfnB, Nitroreductase Energy production and conversion 162455830 Common - ABC-type dipeptide transport system, periplasmic component sce7548 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 162456686 Common - hypothetical protein sce8403 14 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162448401 Nonpathogen - hypothetical protein sce0131 1 None None None 162451853 Nonpathogen - hypothetical protein sce3580 3 None None None 162457150 Common - putative transferase sce8865 33 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448980 Nonpathogen - hypothetical protein sce0710 1 None None None 162456091 Common - sensor histidine kinase sce7809 206 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162456433 Common - two-component response regulator sce8150 195 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162452090 Common fabH3 3-oxoacyl-(acyl-carrier-protein) synthase III sce3817 203 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162457130 Common - hypothetical protein sce8845 47 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162450945 Common - RNA-directed DNA polymerase sce2673 44 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 162454483 Nonpathogen - hypothetical protein sce6203 4 None None None 162452234 Nonpathogen - hypothetical protein sce3961 1 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162454246 Nonpathogen - Calcineurin-like phosphoesterase sce5969 3 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162456050 Nonpathogen - hypothetical protein sce7768 12 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 162449358 Common - ABC transporter, permease protein sce1088 137 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162454910 Nonpathogen - putative secreted protein sce6628 5 None None None 162452711 Common - hypothetical protein sce4435 20 COG4752 COG4752, Uncharacterized protein conserved in bacteria Function unknown 162449194 Common had haloacetate dehalogenase sce0923 65 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 162455871 Common - hypothetical protein sce7589 23 None None None 162453945 Common pgi hypothetical protein sce5669 210 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 162452175 Common lspA1 Signal peptidase II sce3902 187 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162455598 Nonpathogen - hypothetical protein sce7316 1 None None None 162456625 Common - Uncharacterized flavoprotein sce8342 12 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 162448602 Nonpathogen - putative Cytochrome-c oxidase sce0332 4 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 162456295 Common - AMP-binding enzyme family protein sce8012 224 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 162453924 Common aspB2 Aspartate transaminase sce5648 233 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 162450436 Common - Dehydrogenase sce2164 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162456584 Common - putative ABC transport system permease protein sce8301 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 162451951 Nonpathogen - hypothetical protein sce3678 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162451238 Common nifM Foldase protein prsA precursor . sce2966 57 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162451118 Common ctaA Cytochrome aa3 controlling protein sce2846 21 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 162455417 Nonpathogen - hypothetical protein sce7135 2 COG5502 COG5502, Uncharacterized conserved protein Function unknown 162456848 Common - peptide ABC transporter ATP-binding protein sce8565 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 162453473 Common - put. Pyruvate kinase sce5197 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 162453232 Common - two-component hybrid sensor and regulator sce4956 223 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162451600 Nonpathogen - hypothetical protein sce3328 1 None None None 162449326 Nonpathogen - hypothetical protein sce1056 1 None None None 162450670 Nonpathogen - hypothetical protein sce2398 2 None None None 162453130 Nonpathogen - hypothetical protein sce4854 1 None None None 162455485 Common - Metalloprotease MEP1 homolog sce7203 10 None None None 162453214 Common yvpA similar to pectate lyase sce4938 14 None None None 162456066 Nonpathogen - putative secreted protein sce7784 1 None None None 162449171 Common - hypothetical protein sce0901 6 None None None 162451314 Nonpathogen - hypothetical protein sce3042 1 None None None 162457256 Nonpathogen - hypothetical protein sce8971 1 None None None 162454311 Nonpathogen - hypothetical protein sce6034 1 None None None 162449954 Common - oxidoreductase, short-chain dehydrogenase/reductase family sce1683 234 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162450318 Nonpathogen - hypothetical protein sce2046 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451095 Common hisH amidotransferase sce2823 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 162456521 Common rbsC4 Ribose ABC transporter permease protein sce8238 102 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162453590 Nonpathogen - hypothetical protein sce5314 1 None None None 162454979 Common - putative transcriptional regulator sce6697 20 COG1309 AcrR, Transcriptional regulator Transcription 162448308 Common pbp1 penicillin-binding protein sce0039 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 162453239 Nonpathogen - putative signal transduction protein sce4963 4 None None None 162449745 Common - two-component sensor histidine kinase sce1474 218 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453972 Common mukF MukF protein sce5696 20 COG3006 MukF, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 162454238 Common - hypothetical protein sce5961 10 None None None 162449841 Common pdhB1 Pyruvate dehydrogenase (acetyl-transferring) sce1570 196 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 162451324 Common - Glycoside hydrolase family 2 sce3052 68 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 162452595 Nonpathogen - hypothetical protein sce4319 1 None None None 162454653 Common - methionyl-tRNA formyltransferase sce6373 48 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 162448594 Common - transcriptional regulator sce0324 124 COG1476 COG1476, Predicted transcriptional regulators Transcription 162453699 Nonpathogen - hypothetical protein sce5423 1 None None None 162451589 Common lacI2 HTH-type transcriptional repressor purR sce3317 126 COG1609 PurR, Transcriptional regulators Transcription 162455403 Common - hypothetical protein sce7121 17 COG0433 COG0433, Predicted ATPase General function prediction only 162455049 Common pssA3 hypothetical protein sce6767 139 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 162449969 Nonpathogen - hypothetical protein sce1697 1 None None None 162457140 Common hisC3 Histidinol-phosphate transaminase sce8855 226 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 162450155 Common - hypothetical protein sce1884 75 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 162454550 Nonpathogen - putative transcriptional regulator sce6270 1 None None None 162450126 Common - hypothetical protein sce1855 101 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 162451466 Common - MATE efflux family protein sce3194 146 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162456355 Common - hypothetical protein sce8072 202 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162456881 Nonpathogen - hypothetical protein sce8598 1 None None None 162448848 Nonpathogen - hypothetical protein sce0578 2 COG3054 COG3054, Predicted transcriptional regulator General function prediction only 162453685 Nonpathogen - hypothetical protein sce5409 1 None None None 162452738 Common prlC1 oligopeptidase A sce4462 124 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 162456258 Common rph ribonuclease PH sce7975 184 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 162452716 Nonpathogen - hypothetical protein sce4440 2 None None None 162456937 Common panE4 2-dehydropantoate 2-reductase sce8654 86 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 162456423 Common - hypothetical protein sce8140 13 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 162448642 Common - hypothetical protein sce0372 86 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162453247 Common ama putatuve Metallocarboxypeptidase sce4971 170 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 162451458 Common fabD1 malonyl CoA-acyl carrier protein transacylase sce3186 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 162457382 Common - hypothetical protein sce9097 4 None None None 162455548 Common ribC Riboflavin synthase sce7266 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 162455126 Common - Protein kinase sce6844 226 COG3899 COG3899, Predicted ATPase General function prediction only 162450797 Common - hypothetical protein sce2525 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 162455858 Nonpathogen - hypothetical protein sce7576 1 None None None 162454637 Common - transcriptional regulator, AraC family sce6357 66 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162455349 Nonpathogen - hypothetical protein sce7067 1 None None None 162457265 Common - hypothetical protein sce8980 89 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 162452222 Nonpathogen - hypothetical protein sce3949 1 None None None 162455475 Common - putative DNA-binding protein sce7193 75 COG1396 HipB, Predicted transcriptional regulators Transcription 162448938 Common - putative Oxidoreductase sce0668 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162452981 Common - molybdopterin oxidoreductase, iron-sulfur binding subunit sce4705 168 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 162457642 Nonpathogen - hypothetical protein sce9356 1 None None None 162453575 Nonpathogen - hypothetical protein sce5299 1 None None None 162452082 Common - probable pilus assembly ATPAse sce3809 116 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 162456945 Common - hypothetical protein-transmembrane prediction sce8662 7 None None None 162451372 Common - Sugar transport system permease sce3100 148 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162454583 Nonpathogen - hypothetical protein sce6303 1 None None None 162457103 Common - Mau operon transcriptional activator. sce8818 69 COG0583 LysR, Transcriptional regulator Transcription 162454887 Nonpathogen - hypothetical protein sce6605 1 None None None 162456528 Common rpmG3 50S ribosomal protein L33 sce8245 127 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 162452006 Common leuA1 2-isopropylmalate synthase sce3733 212 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 162454671 Nonpathogen - putative secreted protein sce6391 1 None None None 162448792 Common nuoA1 NADH dehydrogenase (ubiquinone) sce0522 158 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 162452819 Common - Protein kinase sce4543 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452903 Common - putative DeoR-family transcriptional regulator sce4627 61 COG2378 COG2378, Predicted transcriptional regulator Transcription 162455818 Nonpathogen - hypothetical protein sce7536 1 COG4252 COG4252, Predicted transmembrane sensor domain Signal transduction mechanisms 162456926 Common - putative ABC transporter ATP-binding protein sce8643 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162449408 Common - acetyltransferase sce1138 123 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162451123 Nonpathogen - hypothetical protein sce2851 1 None None None 162450755 Nonpathogen - hypothetical protein sce2483 1 None None None 162449868 Nonpathogen - hypothetical protein sce1597 2 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162448902 Common - Protein kinase sce0632 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449140 Common - hypothetical protein sce0870 16 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 162454342 Nonpathogen - hypothetical protein sce6065 1 None None None 162455636 Common - hypothetical protein sce7354 213 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 162452886 Nonpathogen - hypothetical protein sce4610 2 None None None 162456687 Common - hypothetical protein sce8404 49 COG2912 COG2912, Uncharacterized conserved protein Function unknown 162450273 Common - putative 3-oxoacyl-[acyl-carrier-protein] reductase sce2001 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162452104 Nonpathogen - putative secreted protein sce3831 1 None None None 162452931 Common - hypothetical protein sce4655 37 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 162457553 Nonpathogen - hypothetical protein sce9267 3 None None None 162452317 Nonpathogen - hypothetical protein sce4043 1 None None None 162454515 Common guaA2 putative GMP synthase sce6235 222 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 162449375 Common - hypothetical protein sce1105 88 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 162453435 Common gudD Glucarate dehydratase sce5159 117 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 162457561 Nonpathogen - hypothetical protein sce9275 1 None None None 162452045 Nonpathogen - hypothetical protein sce3772 1 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 162457504 Common gspE2 general secretion pathway protein E sce9218 219 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 162450169 Common - transposase sce1898 98 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162451086 Nonpathogen - hypothetical protein sce2814 1 None None None 162455194 Common - thiosulfate sulfurtransferase sce6912 146 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 162457310 Common dnaK2 chaperone protein dnaK sce9025 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162451599 Common - probable extracellular nuclease sce3327 12 None None None 162450164 Common - hypothetical protein sce1893 43 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 162455323 Common - hypothetical protein sce7041 29 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 162451062 Nonpathogen - Subtilisin-like serine protease sce2790 1 None None None 162455003 Common - hypothetical protein sce6721 20 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 162454592 Common - transcriptional regulator, ArsR family sce6312 173 COG0640 ArsR, Predicted transcriptional regulators Transcription 162455828 Nonpathogen - PE-PGRS family protein sce7546 3 COG4907 COG4907, Predicted membrane protein Function unknown 162453653 Common - hypothetical protein sce5377 29 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162455112 Nonpathogen - hypothetical protein sce6830 1 None None None 162453944 Common - hypothetical protein sce5668 81 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162448559 Common - putative Oxidoreductase sce0289 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162455511 Common salY hypothetical protein sce7229 160 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 162449160 Common ddlA2 D-alanine-D-alanine ligase / aminopeptidase sce0890 212 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449276 Common - hypothetical protein sce1006 173 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 162448552 Nonpathogen - hypothetical protein sce0282 1 None None None 162451427 Nonpathogen - hypothetical protein sce3155 1 None None None 162455434 Nonpathogen - hypothetical protein sce7152 5 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 162449155 Nonpathogen - hypothetical protein sce0885 3 None None None 162454715 Nonpathogen - hypothetical protein sce6433 1 None None None 162450306 Common - hypothetical protein sce2034 64 COG1641 COG1641, Uncharacterized conserved protein Function unknown 162452570 Common - hypothetical protein sce4295 17 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 162454943 Common - putative thrombospondin family protein sce6661 28 None None None 162451263 Common aglS1 putative adventurous gliding motility protein sce2991 6 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162452044 Common - Sigma-54 dependent transcriptional regulator sce3771 190 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450162 Common - transposase, IS4 family sce1891 27 None None None 162452748 Nonpathogen - hypothetical protein sce4472 1 None None None 162456442 Nonpathogen - hypothetical protein sce8159 1 None None None 162448855 Common crtD putative methoxyneurosporene dehydrogenase sce0585 65 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162453820 Common paiB hypothetical protein sce5544 60 COG2808 PaiB, Transcriptional regulator Transcription 162455518 Nonpathogen - hypothetical protein sce7236 1 None None None 162453141 Nonpathogen - hypothetical protein sce4865 1 None None None 162455133 Nonpathogen - hypothetical protein sce6851 1 None None None 162456417 Common - hypothetical protein sce8134 5 None None None 162452063 Common amiC hypothetical protein sce3789 179 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 162456648 Common - hypothetical protein sce8365 4 None None None 162455006 Nonpathogen - hypothetical protein sce6724 2 None None None 162450841 Common - SmpB-like protein sce2569 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 162456282 Common msrA2 hypothetical protein sce7999 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 162449020 Nonpathogen - hypothetical protein sce0750 1 None None None 162450065 Common - Protein kinase sce1794 139 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448992 Nonpathogen - hypothetical protein sce0722 2 None None None 162452628 Common thrS hypothetical protein sce4352 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162456641 Common - putative 3-oxoacyl-[acyl-carrier-protein] synthase domain protein sce8358 10 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162453428 Common coaA Pantothenate kinase sce5152 79 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 162450233 Common - glycosyltransferase sce1961 192 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162454768 Nonpathogen - hypothetical protein sce6486 1 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162456995 Common czcA2 RND divalent metal cation efflux transporter CzcA sce8711 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 162455861 Nonpathogen - putative secreted protein sce7579 3 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162449109 Common rpsG 30S ribosomal protein S7 sce0839 239 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 162454646 Nonpathogen - probable endo-1,4-beta-glucanase sce6366 1 None None None 162455933 Common czcD cation efflux family protein sce7651 177 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 162449436 Common - acyl-Coenzyme A dehydrogenase, short/branched chain sce1166 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162454658 Common - hypothetical protein sce6378 3 None None None 162456449 Common - DNA gyrase subunit B sce8166 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 162453222 Nonpathogen - hypothetical protein sce4946 1 COG4278 COG4278, Uncharacterized conserved protein Function unknown 162452071 Nonpathogen - hypothetical protein sce3798 1 None None None 162457436 Common - Protein kinase sce9150 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455273 Common - Protein kinase sce6991 178 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162455480 Common - hypothetical protein sce7198 217 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452741 Common - Protein kinase sce4465 105 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448453 Nonpathogen gst1 hypothetical protein sce0183 2 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162450338 Nonpathogen - putative LysE type translocator sce2066 1 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 162448581 Nonpathogen dnaJ DnaJ domain sce0311 4 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162448885 Common - uncharacterized membrane protein sce0615 139 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 162453909 Nonpathogen - hypothetical protein sce5633 10 None None None 162454557 Nonpathogen - hypothetical protein sce6277 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456679 Nonpathogen - hypothetical protein sce8396 1 None None None 162455842 Nonpathogen - hypothetical protein sce7560 1 None None None 162453597 Common - hypothetical protein sce5321 17 None None None 162455900 Common - hypothetical protein sce7618 5 None None None 162456410 Common ilvG1 putative Acetolactate synthase sce8127 220 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 162456735 Nonpathogen - hypothetical protein sce8452 1 None None None 162456027 Common - hypothetical protein sce7745 6 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162454072 Common rbfA hypothetical protein sce5796 128 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 162456700 Common - hypothetical protein sce8417 5 None None None 162452806 Common - Putative acetyltransferase sce4530 97 COG3153 COG3153, Predicted acetyltransferase General function prediction only 162453565 Nonpathogen - hypothetical protein sce5289 2 None None None 162455541 Common pyrH Phosphotransfease with a phosphate group as acceptor sce7259 230 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 162450595 Common - hypothetical protein sce2323 101 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162457037 Common - uncharaterized conserved protein sce8752 25 COG3482 COG3482, Uncharacterized conserved protein Function unknown 162448649 Common nrdA1 putative Ribonucleoside-diphosphate reductase sce0379 210 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 162451447 Common - hypothetical protein sce3175 19 None None None 162451926 Nonpathogen - hypothetical protein sce3653 7 None None None 162451187 Common ybgF hypothetical protein sce2915 4 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162457459 Common - hypothetical protein sce9173 4 None None None 162457424 Common - hypothetical protein sce9138 10 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 162451632 Common - ABC-type dipeptide transport system, periplasmic component sce3360 204 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 162451747 Common - hypothetical protein sce3474 24 COG3239 DesA, Fatty acid desaturase Lipid metabolism 162453964 Nonpathogen - hypothetical protein sce5688 1 None None None 162449878 Nonpathogen - PE_PGRS family protein sce1607 1 None None None 162455391 Common - hypothetical protein sce7109 10 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 162452242 Common - hypothetical protein sce3969 10 None None None 162452815 Common - Protein kinase sce4539 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453766 Common ybiT putative ATP-binding component of a transport system sce5490 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162452586 Nonpathogen - hypothetical protein sce4310 1 None None None 162449893 Nonpathogen - hypothetical protein sce1622 3 None None None 162450361 Nonpathogen - hypothetical protein sce2089 10 None None None 162448548 Common - hypothetical protein sce0278 23 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 162450556 Common - hypothetical protein sce2284 6 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 162457145 Common - hypothetical protein sce8860 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 162457210 Nonpathogen - hypothetical protein sce8925 1 None None None 162454793 Common - putative transcriptional regulator sce6511 123 COG1396 HipB, Predicted transcriptional regulators Transcription 162452715 Common rpsP 30S ribosomal protein S16 sce4439 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 162456917 Common - Methylenetetrahydrofolate reductase family protein sce8634 174 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 162454077 Common - hypothetical protein sce5801 149 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 162449531 Nonpathogen - erythrocyte membrane protein 1 (PfEMP1) sce1262 1 COG4907 COG4907, Predicted membrane protein Function unknown 162451860 Common - hypothetical protein sce3587 68 COG2170 COG2170, Uncharacterized conserved protein Function unknown 162448444 Common - hypothetical protein sce0174 45 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162457544 Common - hypothetical protein sce9258 16 None None None 162454146 Common - hypothetical protein sce5870 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 162455453 Common - ABC transporter ATP-binding protein sce7171 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162453204 Common pyrG1 putative CTP synthase sce4928 245 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 162450969 Nonpathogen - hypothetical protein sce2697 1 None None None 162453279 Common lon5 ATP-dependent protease La sce5003 205 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 162456007 Common - hypothetical protein sce7725 7 None None None 162449661 Nonpathogen - hypothetical protein sce1390 1 None None None 162455276 Nonpathogen - hypothetical protein sce6994 3 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162453957 Nonpathogen - hypothetical protein sce5681 1 COG1769 COG1769, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 162457584 Nonpathogen - hypothetical protein sce9298 2 None None None 162453930 Nonpathogen - hypothetical protein sce5654 1 None None None 162453272 Common - hypothetical protein DUF 1316 domain sce4996 13 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 162454728 Common tldD Peptidase U62 sce6446 169 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 162454668 Common - hypothetical protein sce6388 27 COG0622 COG0622, Predicted phosphoesterase General function prediction only 162449635 Common dinP DNA polymerase IV sce1364 183 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 162454158 Common - hypothetical protein sce5882 9 COG2225 AceB, Malate synthase Energy production and conversion 162451408 Common crcB crcB protein sce3136 171 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 162450690 Nonpathogen - hypothetical protein sce2418 1 None None None 162449009 Common - hypothetical protein sce0739 61 COG0730 COG0730, Predicted permeases General function prediction only 162452369 Nonpathogen - hypothetical protein sce4093 3 None None None 162449764 Nonpathogen - hypothetical protein sce1493 1 None None None 162450806 Common - putative ABC-2 type transport system ATP-binding protein sce2534 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162454385 Nonpathogen - putative transposase sce6108 3 None None None 162457178 Common - hypothetical protein sce8893 31 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162451795 Common - hypothetical protein sce3522 5 None None None 162454980 Common - hypothetical protein sce6698 4 None None None 162455932 Nonpathogen - hypothetical protein sce7650 1 None None None 162452575 Common - peptide ABC transporter, ATP-binding protein sce4299 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 162454953 Nonpathogen xlyA N-acetylmuramoyl-L-alanine amidase sce6671 3 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 162449533 Nonpathogen - hypothetical protein sce1264 1 None None None 162456740 Nonpathogen - hypothetical protein sce8457 1 None None None 162449510 Common - Carbohydrate kinase, pfkB family sce1240 94 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 162454005 Nonpathogen - hypothetical protein sce5729 17 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162453901 Common ubiE4 Ubiquinone/menaquinone biosynthesis methyltransferase sce5625 174 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162456901 Nonpathogen - hypothetical protein sce8618 3 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162449625 Common kdpC Potassium-transporting ATPase C chain sce1354 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 162454234 Common - hypothetical protein sce5957 18 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 162453935 Nonpathogen - hypothetical protein sce5659 2 None None None 162453042 Common - LysR-family transcriptional regulator sce4766 156 COG0583 LysR, Transcriptional regulator Transcription 162451126 Nonpathogen - hypothetical protein sce2854 2 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162454189 Common - hypothetical protein sce5912 40 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162457387 Common - transposase sce9102 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455793 Nonpathogen - hypothetical protein sce7511 2 None None None 162451249 Nonpathogen - hypothetical protein sce2977 1 None None None 162449820 Common - put.Sugar aldolase sce1549 129 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 162450590 Nonpathogen - putative secreted protein sce2318 1 None None None 162453339 Nonpathogen - hypothetical protein sce5063 1 None None None 162456586 Common - hypothetical protein sce8303 11 None None None 162455177 Nonpathogen - hypothetical protein sce6895 1 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162452955 Nonpathogen - hypothetical protein sce4679 4 None None None 162452829 Nonpathogen - hypothetical protein sce4553 1 None None None 162453476 Nonpathogen - hypothetical protein sce5200 2 COG5381 COG5381, Uncharacterized protein conserved in bacteria Function unknown 162453262 Common - hypothetical protein sce4986 24 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 162450166 Nonpathogen - hypothetical protein sce1895 3 None None None 162456458 Nonpathogen - hypothetical protein sce8175 5 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162449302 Common guaB2 IMP dehydrogenase sce1032 238 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 162455876 Common - putative Cytochrome-c oxidase sce7594 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 162452352 Common - similar to putative transposase sce4076 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 162455244 Common - transcriptional regulator, LysR family sce6961 110 COG0583 LysR, Transcriptional regulator Transcription 162450149 Nonpathogen - hypothetical protein sce1878 1 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 162456022 Nonpathogen - hypothetical protein sce7740 2 None None None 162456277 Common yfbL1 hypothetical protein sce7994 36 COG2234 Iap, Predicted aminopeptidases General function prediction only 162456691 Common algI membrane-bound polysaccharide acetyltransferase sce8408 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 162451547 Common - Hypothetical serine rich protein sce3275 6 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162452042 Common - putative L-asparaginase sce3769 76 COG1446 COG1446, Asparaginase Amino acid transport and metabolism 162449872 Nonpathogen - hypothetical protein sce1601 9 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 162448447 Common - transcriptional regulator, LysR family sce0177 93 COG0583 LysR, Transcriptional regulator Transcription 162452919 Common - probable cysteine desulfurase sce4643 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162453965 Nonpathogen - hypothetical protein sce5689 6 COG1746 CCA1, tRNA nucleotidyltransferase (CCA-adding enzyme) Translation, ribosomal structure and biogenesis 162452937 Common - pobable short chain dehydrogenase/reductase SDR family sce4661 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162457475 Common - Aldehyde dehydrogenase (NAD(+)). sce9189 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162456506 Common - hypothetical protein sce8223 2 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 162451464 Common - polyketide synthase sce3192 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162457338 Nonpathogen - hypothetical protein sce9053 1 None None None 162455515 Common - thioredoxin family protein sce7233 3 None None None 162448734 Nonpathogen - hypothetical protein sce0464 1 None None None 162455757 Nonpathogen - hypothetical protein sce7475 1 None None None 162454147 Common metH1 Methionine synthase sce5871 178 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 162451138 Common - Protein kinase sce2866 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456954 Common polA1 DNA polymerase I sce8671 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 162457429 Nonpathogen - hypothetical protein sce9143 1 None None None 162451786 Common - putative hydrolase sce3513 98 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162452980 Nonpathogen - hypothetical protein sce4704 3 None None None 162454079 Nonpathogen - hypothetical protein sce5803 1 None None None 162450159 Nonpathogen - hypothetical protein sce1888 1 None None None 162448777 Common - hypothetical protein sce0507 4 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162453504 Nonpathogen - hypothetical protein sce5228 1 None None None 162450067 Nonpathogen - hypothetical protein sce1796 2 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162453914 Nonpathogen - putative secreted protein sce5638 1 None None None 162452238 Common - putative two-component system response regulator sce3965 195 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 162454094 Nonpathogen - hypothetical protein sce5818 7 None None None 162449519 Common - hypothetical protein sce1249 56 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162451651 Common - putative Isochorismatase hydrolase sce3379 149 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162448575 Nonpathogen - hypothetical protein sce0305 1 None None None 162452504 Common - Protein kinase sce4228 138 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452023 Common dnaE2 DNA polymerase III, alpha subunit sce3750 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 162454022 Nonpathogen - hypothetical protein sce5746 1 None None None 162455193 Common - arginase/agmatinase/formimionoglutamate hydrolase, arginase family sce6911 92 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 162448562 Nonpathogen - hypothetical protein sce0291 1 COG4907 COG4907, Predicted membrane protein Function unknown 162452402 Nonpathogen - hypothetical protein sce4126 1 None None None 162453628 Common - hypothetical protein sce5352 6 COG0398 COG0398, Uncharacterized conserved protein Function unknown 162448901 Common - Protein kinase sce0631 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456544 Common - polyketide synthase type I sce8261 208 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162456681 Nonpathogen - hypothetical protein sce8398 5 None None None 162453437 Nonpathogen - hypothetical protein sce5161 1 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 162453621 Common - putative beta-lactamase sce5345 112 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162452584 Common - Dehydrogenase sce4308 194 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162454074 Common infB translation initiation factor IF-2 sce5798 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 162451531 Common - hypothetical protein sce3259 18 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 162450031 Nonpathogen - hypothetical protein sce1760 1 None None None 162450049 Common - hypothetical protein sce1778 9 COG5439 COG5439, Uncharacterized conserved protein Function unknown 162453515 Common - hypothetical protein sce5239 77 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 162454975 Common - O-Glycosyl hydrolase sce6693 34 COG3693 XynA, Beta-1,4-xylanase Carbohydrate transport and metabolism 162449024 Common - ABC transporter, ATP-binding protein sce0754 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162454644 Nonpathogen - hypothetical protein sce6364 1 COG1572 COG1572, Uncharacterized conserved protein Function unknown 162450584 Common - two-component hybrid sensor and regulator sce2312 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162451418 Common tig trigger factor sce3146 215 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 162456707 Common - ABC-type dipeptide transport system, periplasmic component sce8424 212 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 162457269 Nonpathogen - hypothetical protein sce8984 1 None None None 162448417 Nonpathogen - hypothetical protein sce0147 1 None None None 162449722 Nonpathogen - hypothetical protein sce1451 1 None None None 162448978 Common - probable phenazine biosynthesis protein sce0708 15 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 162451480 Common - sigma-54 dependent DNA-binding response regulator sce3208 169 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453563 Common - transcriptional regulator, AraC family sce5287 115 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162451891 Nonpathogen - hypothetical protein sce3618 1 None None None 162449819 Common - glycosyltransferase sce1548 162 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162451462 Common - polyketide synthase sce3190 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162455918 Common trxB Thioredoxin-disulfide reductase sce7636 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 162448423 Nonpathogen - putative secreted protein sce0153 1 None None None 162452332 Common - putative Methyltransferase sce4058 42 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 162456524 Common ilvD3 Dihydroxy-acid dehydratase sce8241 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 162453553 Common - hypothetical protein sce5277 2 None None None 162452891 Common - Protein kinase sce4615 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453330 Common nth3 putative endonuclease III sce5054 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 162456923 Nonpathogen - ECF-family RNA polymerase sigma factor sce8640 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455042 Common - hypothetical exported protein with glycosyltransferase signatures sce6760 169 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162451744 Common lipH putative lipase activator protein sce3471 10 COG5380 LimK, Lipase chaperone Posttranslational modification, protein turnover, chaperones 162450335 Nonpathogen - hypothetical protein sce2063 1 None None None 162452076 Common - putative ATP/GTP-binding protein sce3803 80 COG0457 NrfG, FOG: TPR repeat General function prediction only 162456722 Nonpathogen - hypothetical protein sce8439 1 None None None 162452187 Common - hypothetical protein sce3914 32 COG3177 COG3177, Uncharacterized conserved protein Function unknown 162456817 Common goxB Glycine oxidase sce8534 145 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 162455161 Nonpathogen - hypothetical protein sce6879 1 None None None 162457636 Nonpathogen - hypothetical protein sce9350 1 None None None 162450072 Nonpathogen - hypothetical protein sce1801 1 None None None 162448412 Nonpathogen - hypothetical protein sce0142 1 None None None 162448991 Nonpathogen - hypothetical protein sce0721 1 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162451455 Common acpP2 hypothetical protein sce3183 5 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162450433 Nonpathogen - hypothetical protein sce2161 1 None None None 162451327 Common - hypothetical protein with NDP-sugar oxidoreductase domain sce3055 171 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 162449330 Common yfcX Isomerases acting on hydroxy acids and derivatives sce1060 16 COG3396 COG3396, Uncharacterized conserved protein Function unknown 162457237 Common - hypothetical protein sce8952 18 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162448908 Common pp2c1 Phosphoprotein phosphatase sce0638 77 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162455157 Common - hypothetical protein sce6875 15 COG1708 COG1708, Predicted nucleotidyltransferases General function prediction only 162455829 Nonpathogen - putative secreted protein sce7547 1 None None None 162449203 Common - Protein kinase sce0933 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451736 Common bolA BolA-like protein sce3463 95 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 162449916 Common fabG3 3-oxoacyl-[acyl-carrier-protein] reductase sce1646 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162448818 Common yebN hypothetical protein sce0548 67 COG1971 COG1971, Predicted membrane protein Function unknown 162448870 Common - putative hydroxylase sce0600 43 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162452539 Common - Protein kinase sce4263 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452344 Nonpathogen - hypothetical protein sce4068 1 None None None 162453485 Common - Protein kinase sce5209 150 COG3899 COG3899, Predicted ATPase General function prediction only 162454930 Common - hypothetical protein sce6648 50 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 162453823 Nonpathogen - hypothetical protein sce5547 1 None None None 162456385 Common - multicopper oxidase sce8102 134 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162455415 Nonpathogen - hypothetical protein sce7133 4 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 162456889 Nonpathogen - hypothetical protein sce8606 1 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455410 Common - hypothetical protein sce7128 7 None None None 162450949 Common - hypothetical protein sce2677 163 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455001 Nonpathogen - hypothetical protein sce6719 1 None None None 162450343 Nonpathogen - putative secreted protein sce2071 1 None None None 162455860 Nonpathogen - hypothetical protein sce7578 1 None None None 162451091 Common - putative Oxidoreductase sce2819 199 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162456039 Common - similar to ABC transporter (permease proteins) sce7757 106 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 162452687 Nonpathogen - putative secreted protein sce4411 1 None None None 162453236 Nonpathogen - hypothetical protein sce4960 1 None None None 162457469 Nonpathogen - hypothetical protein sce9183 1 None None None 162450549 Nonpathogen - hypothetical protein sce2277 1 None None None 162454271 Nonpathogen - hypothetical protein sce5994 1 None None None 162456141 Common - hypothetical protein sce7858 6 COG3889 COG3889, Predicted solute binding protein General function prediction only 162451695 Common - sensory box histidine kinase similar to PhoR sce3423 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 162449363 Common ygfP putative guanine deaminase sce1093 160 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 162454920 Common - Hypothetical protein yijF precursor sce6638 17 COG3738 COG3738, Uncharacterized protein conserved in bacteria Function unknown 162449493 Common - permease of the major facilitator superfamily sce1223 108 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162450921 Common - hypothetical protein sce2649 11 None None None 162453471 Common - putative ABC-transport protein sce5195 220 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162448798 Common nuoI NADH dehydrogenase I chain I sce0528 187 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 162449157 Common - oxidoreductase sce0887 181 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 162454516 Common - transcriptional regulator, TetR family sce6236 44 COG1309 AcrR, Transcriptional regulator Transcription 162448703 Nonpathogen - hypothetical protein sce0433 1 None None None 162454551 Common - putative recombinase sce6271 137 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 162454919 Common - reverse transcriptase sce6637 26 None None None 162457129 Common - hypothetical protein sce8844 26 None None None 162452594 Common - cAMP-binding protein Probable transcriptional regulatory protein. sce4318 122 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162449888 Common - Protein kinase sce1617 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457215 Nonpathogen - hypothetical protein sce8930 1 None None None 162448843 Common gltX2 hypothetical protein sce0573 247 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 162448911 Common - hypothetical protein sce0641 10 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 162455857 Common - hypothetical protein sce7575 32 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 162451113 Nonpathogen - hypothetical protein sce2841 1 None None None 162457646 Common atpG H(+)-transporting two-sector ATPase sce9360 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 162454859 Nonpathogen - hypothetical protein sce6577 2 None None None 162453139 Nonpathogen - hypothetical protein sce4863 2 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 162457405 Nonpathogen - hypothetical protein sce9119 1 None None None 162449480 Common - hypothetical protein sce1210 227 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162452719 Common ksgA dimethyladenosine transferase sce4443 245 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 162450323 Common - two component response regulator sce2051 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162451863 Nonpathogen - hypothetical protein sce3590 1 None None None 162450230 Nonpathogen - putative secreted protein sce1958 1 None None None 162451131 Common fabZ (3R)-hydroxymyristoyl- sce2859 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 162451311 Common - hypothetical protein sce3039 40 COG1146 COG1146, Ferredoxin Energy production and conversion 162454676 Nonpathogen - hypothetical protein sce6396 14 None None None 162448711 Common - hypothetical protein sce0441 4 None None None 162454481 Nonpathogen - putative secreted protein sce6201 2 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452050 Common - hypothetical secreted protein sce3777 4 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 162448675 Common nusG transcription antitermination protein NusG sce0405 215 COG0250 NusG, Transcription antiterminator Transcription 162448889 Common - Protein kinase sce0619 97 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454220 Common - TPR domain protein sce5943 95 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 162455727 Nonpathogen - hypothetical protein sce7445 6 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162457503 Common gspF general secretion pathway protein F sce9217 150 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 162456298 Common - hypothetical protein sce8015 22 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162455551 Common - N utilization substance protein B sce7269 196 COG0781 NusB, Transcription termination factor Transcription 162457611 Common - hypothetical protein sce9325 82 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 162451276 Common - Protein kinase sce3004 105 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450910 Nonpathogen - transcriptional regulator, TetR family sce2638 1 None None None 162451096 Common hisB hypothetical protein sce2824 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 162448432 Common - hypothetical protein sce0162 107 COG2353 COG2353, Uncharacterized conserved protein Function unknown 162453357 Nonpathogen - hypothetical protein containing TPR like repeat sce5081 1 None None None 162450786 Common pp2c3 Phosphoprotein phosphatase sce2514 130 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162453169 Common hppD1 4-hydroxyphenylpyruvate dioxygenase sce4893 74 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 162454032 Common - putative adenylyltransferase sce5756 200 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 162457064 Nonpathogen - hypothetical protein sce8779 1 None None None 162452170 Nonpathogen - hypothetical protein sce3897 1 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 162454947 Nonpathogen - hypothetical protein sce6665 2 None None None 162455218 Common pth hypothetical protein sce6936 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 162455772 Common gst17 glutathione S-transferase family protein sce7490 87 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162454229 Common - GTP-binding protein sce5952 235 COG1160 COG1160, Predicted GTPases General function prediction only 162453160 Common xynB4 Xylan 1,4-beta-xylosidase sce4884 42 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162454046 Nonpathogen - hypothetical protein sce5770 1 None None None 162452231 Nonpathogen - hypothetical protein sce3958 2 None None None 162455945 Common bglA3 Beta-glucosidase sce7663 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 162455762 Common - hypothetical protein sce7480 30 COG3148 COG3148, Uncharacterized conserved protein Function unknown 162453153 Common - two-component histidine kinase sce4877 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451946 Nonpathogen - hypothetical protein sce3673 1 None None None 162449106 Common ppk hypothetical protein sce0836 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 162454969 Common rmlB1 dTDP-glucose 4,6-dehydratase sce6687 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162450662 Common - Putative dehydrogenases sce2390 65 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 162451083 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase sce2811 206 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 162452920 Common - rhodanese-like domain-containing protein sce4644 98 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 162454287 Nonpathogen - hypothetical protein of unknown function sce6010 4 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 162454850 Nonpathogen - hypothetical protein sce6568 3 None None None 162456402 Common - DNA-binding response regulator sce8119 216 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 162452129 Common - hypothetical protein sce3856 131 COG2096 COG2096, Uncharacterized conserved protein Function unknown 162451156 Nonpathogen - hypothetical protein sce2884 1 None None None 162449152 Common - glycosyltransferase sce0882 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 162457523 Common chrA chromate transport protein sce9237 115 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 162455595 Nonpathogen - hypothetical protein sce7313 1 None None None 162453343 Common - hypothetical protein sce5067 24 COG4907 COG4907, Predicted membrane protein Function unknown 162448302 Common rpoN RNA polymerase sigma-54 factor sce0033 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 162451034 Common - putative membrane bound zinc metallopeptidase sce2762 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 162452547 Nonpathogen - putative secreted protein sce4271 1 None None None 162455821 Common - helicase, Snf2 family sce7539 160 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162453942 Nonpathogen - hypothetical protein sce5666 1 None None None 162456582 Common rimI4 acetyltransferase sce8299 8 COG0456 RimI, Acetyltransferases General function prediction only 162454989 Common - transposase sce6707 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162456658 Common - conserved hypothetical protein with a vWF type A domain sce8375 42 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162453593 Common - Protein kinase sce5317 123 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451157 Common recQ ATP-dependent DNA helicase RecQ sce2885 191 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 162456981 Common - Probable Putative HAD-hydrolase sce8697 51 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 162452822 Common - hypothetical protein sce4546 2 None None None 162455839 Nonpathogen - hypothetical protein sce7557 1 None None None 162448770 Nonpathogen - hypothetical protein sce0500 1 None None None 162452211 Common - hypothetical protein sce3938 8 None None None 162457117 Common - putative AraC-family transcriptional regulator sce8832 128 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162452912 Common - hypothetical protein sce4636 8 COG1657 SqhC, Squalene cyclase Lipid metabolism 162448813 Common - Sigma-54 dependent transcriptional regulator sce0543 166 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453734 Nonpathogen - hypothetical protein sce5458 5 None None None 162452057 Common - hypothetical protein sce3784 23 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454356 Common - putative nucleotidyl transferase sce6079 68 COG1213 COG1213, Predicted sugar nucleotidyltransferases Cell envelope biogenesis, outer membrane 162455965 Common pgaA hypothetical protein sce7683 42 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 162454497 Common - hypothetical protein sce6217 69 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162457463 Common - hypothetical protein sce9177 12 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 162450811 Nonpathogen - hypothetical protein sce2539 1 None None None 162452093 Nonpathogen - hypothetical protein sce3820 3 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162457349 Nonpathogen - hypothetical protein sce9064 1 None None None 162449356 Common napG putative ferredoxin sce1086 95 COG0348 NapH, Polyferredoxin Energy production and conversion 162453307 Nonpathogen - Putative secreted protein sce5031 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162452654 Common lspA3 Signal peptidase II. sce4378 135 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162449509 Common kdgA1 hypothetical protein sce1239 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 162450750 Common - FHA domain protein sce2478 28 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162455343 Nonpathogen - hypothetical protein sce7061 1 None None None 162455120 Nonpathogen - hypothetical protein sce6838 1 None None None 162451626 Common fabG7 3-oxoacyl-[acyl-carrier protein] reductase sce3354 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162451799 Common srpH1 hypothetical protein sce3526 188 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 162452848 Nonpathogen - putative cyclic nucleotide-binding protein sce4572 13 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162456836 Common - Protein kinase sce8553 154 COG3899 COG3899, Predicted ATPase General function prediction only 162450127 Nonpathogen - hypothetical protein sce1856 1 None None None 162456169 Common - ECF-family RNA polymerase sigma factor sce7886 80 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457013 Common - Protein kinase sce8728 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450275 Common - hypothetical protein sce2003 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162454654 Nonpathogen - probable carboxylesterase sce6374 5 COG0400 COG0400, Predicted esterase General function prediction only 162456320 Nonpathogen - hypothetical protein sce8037 1 None None None 162457312 Common - hypothetical protein sce9027 31 COG3872 COG3872, Predicted metal-dependent enzyme General function prediction only 162455427 Nonpathogen - hypothetical protein sce7145 11 COG3541 COG3541, Predicted nucleotidyltransferase General function prediction only 162450942 Common - hypothetical protein sce2670 10 None None None 162456947 Common - hypothetical protein sce8664 35 COG3247 HdeD, Uncharacterized conserved protein Function unknown 162450676 Nonpathogen - hypothetical protein sce2404 1 None None None 162450757 Common ctpF cation-transporting P-type ATPase sce2485 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 162452362 Common - conserved carbohydrate-binding protein, Rhs family sce4086 65 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162452528 Common tolR3 biopolymer transport protein, ExbD/TolR family sce4252 17 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162449668 Common - Response regulator sce1397 51 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 162452068 Common pp2c9 Phosphoprotein phosphatase sce3795 138 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162454087 Common - hypothetical protein sce5811 69 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162455544 Common - Protein kinase sce7262 164 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448867 Common - hypothetical protein sce0597 13 COG2155 COG2155, Uncharacterized conserved protein Function unknown 162456913 Common - amidohydrolase sce8630 165 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 162449966 Common - peptidyl-prolyl cis-trans isomerase sce1695 75 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162449881 Nonpathogen - PE_PGRS family protein sce1610 3 None None None 162452929 Nonpathogen - hypothetical protein sce4653 2 None None None 162455047 Nonpathogen - hypothetical protein sce6765 3 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 162457374 Common - hypothetical protein sce9089 69 COG2234 Iap, Predicted aminopeptidases General function prediction only 162451763 Common - Protein kinase sce3490 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453605 Common - hypothetical protein sce5329 94 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162449527 Common - Protein kinase sce1257 124 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457074 Common - pyridine nucleotide-disulphide oxidoreductase,class II sce8790 228 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 162449906 Common - integral membrane protein sce1635 226 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162453921 Common msbA8 ABC transporter family carbohydrate exporter sce5645 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162457536 Nonpathogen - hypothetical protein sce9250 1 None None None 162450218 Common - transcriptional regulator, AraC family sce1946 49 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162450252 Common - hypothetical protein sce1980 106 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162453588 Common - hypothetical protein sce5312 3 None None None 162452837 Common - hypothetical protein sce4561 7 None None None 162455148 Common - hypothetical protein sce6866 6 None None None 162452851 Common hoxH hypothetical protein sce4575 98 COG3259 FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit Energy production and conversion 162455529 Common - hypothetical protein sce7247 24 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162448724 Nonpathogen - hypothetical protein sce0454 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453887 Nonpathogen - hypothetical protein sce5611 2 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 162455865 Common pahx hypothetical protein sce7583 16 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 162450042 Nonpathogen - keratin associated protein 5-4 sce1771 3 None None None 162457435 Common - Protein kinase sce9149 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456418 Common - two component hybrid sensor kinase/response regulator sce8135 218 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162452273 Common - Putative hydrolase sce4000 69 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162456492 Nonpathogen - hypothetical protein sce8209 1 None None None 162453877 Nonpathogen - hypothetical protein sce5601 1 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 162456857 Common - putative oxidoreductase sce8574 184 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162449011 Common - hypothetical protein sce0741 9 None None None 162456626 Common dkgB putative 2,5-didehydrogluconate reductase sce8343 154 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 162455564 Nonpathogen - hypothetical protein sce7282 4 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162455581 Nonpathogen - hypothetical protein sce7299 1 COG4449 COG4449, Predicted protease of the Abi (CAAX) family General function prediction only 162457487 Nonpathogen - hypothetical protein sce9201 1 None None None 162452559 Common galE4 hypothetical protein sce4283 35 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452180 Common - Protein kinase sce3907 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448683 Common rimJ1 Ribosomal-protein-alanine N-acetyltransferase sce0413 98 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162451550 Common sndH L-sorbosone dehydrogenase sce3278 83 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162454142 Nonpathogen - hypothetical protein sce5866 17 COG0392 COG0392, Predicted integral membrane protein Function unknown 162449555 Common - Integrase-like protein sce1284 19 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162449444 Common - response regulator sce1174 51 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454543 Common - putative inner membrane protein sce6263 14 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 162454322 Nonpathogen - hypothetical protein sce6045 2 None None None 162450730 Common - hypothetical protein sce2458 31 COG5495 COG5495, Uncharacterized conserved protein Function unknown 162457085 Common - hypothetical protein sce8800 90 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450772 Nonpathogen - hypothetical protein sce2500 1 None None None 162449752 Nonpathogen - TRP-like protein sce1481 1 None None None 162456390 Common - hypothetical protein sce8107 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454011 Nonpathogen - hypothetical protein sce5735 2 None None None 162455923 Common fadD4 putative Long-chain-fatty-acid--CoA ligase sce7641 219 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449877 Nonpathogen - hypothetical protein sce1606 2 None None None 162450024 Common rubY hypothetical protein sce1753 79 COG1592 COG1592, Rubrerythrin Energy production and conversion 162451018 Common - Protein kinase sce2746 149 COG3899 COG3899, Predicted ATPase General function prediction only 162451179 Nonpathogen - hypothetical protein sce2907 3 None None None 162453464 Nonpathogen - hypothetical protein sce5188 2 None None None 162451236 Common - transcriptional regulator, ArsR family sce2964 33 COG0640 ArsR, Predicted transcriptional regulators Transcription 162450259 Common - hypothetical protein sce1987 13 COG4633 COG4633, Uncharacterized protein conserved in bacteria Function unknown 162451197 Nonpathogen - hypothetical protein sce2925 1 None None None 162454560 Nonpathogen - putative transposase sce6280 1 None None None 162448847 Common - Heat shock protein, HSP20 family sce0577 146 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 162451050 Nonpathogen - hypothetical protein sce2778 1 None None None 162455309 Common - putative secreted tripeptidyl aminopeptidase sce7027 7 COG4907 COG4907, Predicted membrane protein Function unknown 162452157 Nonpathogen - hypothetical protein sce3884 1 COG3295 COG3295, Uncharacterized protein conserved in bacteria Function unknown 162451215 Common pstB phosphate ABC transporter, ATP-binding protein PstB sce2943 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 162450144 Nonpathogen - putative secreted protein sce1873 1 None None None 162451039 Common - Protein kinase sce2767 138 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450310 Common - putative protease sce2038 17 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162450470 Common - hypothetical protein sce2198 9 None None None 162451008 Common czcB1 heavy metal efflux pump, CzcB family sce2736 152 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162451048 Nonpathogen - hypothetical protein sce2776 1 None None None 162453450 Nonpathogen - hypothetical protein sce5174 1 None None None 162456283 Common pdhD pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase) sce8000 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 162454409 Nonpathogen - putative secreted protein sce6130 1 None None None 162454763 Common - hypothetical protein sce6481 206 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 162454031 Common - hypothetical protein sce5755 47 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 162454636 Nonpathogen - hypothetical protein sce6356 1 None None None 162449445 Common glpD hypothetical protein sce1175 133 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 162451817 Nonpathogen - hypothetical protein sce3544 1 None None None 162457400 Common fumC1 Fumarate hydratase sce9115 202 COG0114 FumC, Fumarase Energy production and conversion 162455185 Nonpathogen - hypothetical protein sce6903 1 None None None 162451591 Nonpathogen - putative secreted protein sce3319 1 None None None 162451778 Common - hypothetical protein sce3505 3 None None None 162454154 Common - hypothetical protein sce5878 8 None None None 162451014 Common - hypothetical protein sce2742 128 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 162448441 Nonpathogen - hypothetical protein sce0171 2 None None None 162456718 Nonpathogen - hypothetical protein sce8435 1 None None None 162450274 Nonpathogen - hypothetical protein sce2002 1 None None None 162452647 Common - hypothetical protein sce4371 17 COG3744 COG3744, Uncharacterized protein conserved in bacteria Function unknown 162448286 Nonpathogen - hypothetical protein sce0017 1 None None None 162450697 Nonpathogen - hypothetical protein sce2425 1 None None None 162454202 Nonpathogen - ECF-family RNA polymerase sigma factor sce5925 4 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455635 Common - Protein kinase sce7353 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450235 Common kptA probable RNA 2'-phosphotransferase sce1963 40 COG1859 KptA, RNA:NAD 2'-phosphotransferase Translation, ribosomal structure and biogenesis 162456599 Common - competence protein sce8316 120 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 162448718 Common - hypothetical protein sce0448 47 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 162456337 Nonpathogen - hypothetical protein sce8054 2 None None None 162451845 Nonpathogen - hypothetical protein sce3572 1 None None None 162455189 Common - Acyl-CoA dehydrogenase sce6907 156 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162455642 Common - hypothetical protein sce7360 88 COG0391 COG0391, Uncharacterized conserved protein Function unknown 162449390 Nonpathogen - hypothetical protein sce1120 1 None None None 162453690 Common - hypothetical protein ybaA sce5414 39 COG5507 COG5507, Uncharacterized conserved protein Function unknown 162453640 Common - hypothetical protein sce5364 5 None None None 162456327 Nonpathogen - putative secreted protein sce8044 1 None None None 162452326 Common - transposase sce4052 75 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 162457552 Common - put. ABC transporter sugar permease sce9266 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 162456306 Nonpathogen - hypothetical protein sce8023 1 None None None 162450877 Nonpathogen - hypothetical protein sce2605 1 None None None 162454182 Common moxR1 methanol dehydrogenase regulator (moxR) homolog sce5905 180 COG0714 COG0714, MoxR-like ATPases General function prediction only 162454056 Common - hypothetical protein sce5780 74 COG3899 COG3899, Predicted ATPase General function prediction only 162448895 Common - electron transfer flavoprotein alpha-subunit sce0625 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 162455028 Common - Sigma-54 dependent transcriptional regulator. sce6746 179 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162456515 Nonpathogen - hypothetical protein sce8232 2 None None None 162449294 Common - exported nucleotide-binding protein sce1024 48 None None None 162449082 Common - Fatty acid desaturase sce0812 60 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 162453100 Common macA putative HlyD family secretion protein sce4824 178 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162455463 Nonpathogen - hypothetical protein sce7181 4 COG2149 COG2149, Predicted membrane protein Function unknown 162456504 Common - putative FkbH-protein sce8221 31 COG3882 FkbH, Predicted enzyme involved in methoxymalonyl-ACP biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162448558 Nonpathogen - hypothetical protein sce0288 1 None None None 162454789 Common - hypothetical protein sce6507 9 None None None 162455817 Common - kumamolisin sce7535 26 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 162451879 Nonpathogen - collagen sce3606 1 None None None 162456729 Nonpathogen - hypothetical protein sce8446 1 None None None 162454624 Nonpathogen - hypothetical protein sce6344 1 None None None 162454663 Common - hypothetical protein sce6382 37 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455986 Common - hypothetical protein sce7704 71 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 162453882 Common ppx2 hypothetical protein sce5606 179 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 162450455 Common ubiG2 3-demethylubiquinone-9 3-O-methyltransferase sce2183 18 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162448879 Nonpathogen - hypothetical protein sce0609 3 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 162454929 Common - probable transcriptional regulator sce6647 122 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162449364 Nonpathogen - hypothetical protein sce1094 1 None None None 162454734 Nonpathogen tatA putative sec-independent protein translocase protein sce6452 1 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 162456865 Common phaG pH adaptation potassium efflux protein PhaG sce8582 17 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 162457245 Nonpathogen - hypothetical protein sce8960 1 None None None 162455261 Common phlC2 phosphoesterase precursor sce6979 33 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 162451998 Common - ChaC-like family protein sce3725 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 162448956 Common - Sigma-54 dependent transcriptional regulator sce0686 177 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162453159 Common leuA2 2-isopropylmalate synthase sce4883 210 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 162456071 Common - sulfatase family protein sce7789 74 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 162456595 Common - branched-chain amino acid ABC transporter, amino acid-binding protein sce8312 154 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 162450180 Nonpathogen - hypothetical protein sce1909 5 None None None 162454169 Common ygeT putative Xanthine dehydrogenase sce5893 82 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 162455334 Common acp hypothetical protein sce7052 42 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162448553 Nonpathogen - hypothetical protein sce0283 2 None None None 162451824 Common - cartilage oligomeric matrix protein sce3551 8 None None None 162457155 Nonpathogen - hypothetical protein sce8870 1 None None None 162449672 Common - anti-anti-sigma factor protein sce1401 51 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162448438 Common - monooxygenase sce0168 66 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162451422 Common purH IMP cyclohydrolase sce3150 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 162455359 Common - hypothetical protein sce7077 68 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162449193 Common - transcriptional regulator, LysR family sce0924 145 COG0583 LysR, Transcriptional regulator Transcription 162452081 Common - cold shock protein sce3808 175 COG1278 CspC, Cold shock proteins Transcription 162457230 Nonpathogen - hypothetical protein sce8945 6 None None None 162451574 Nonpathogen - hypothetical protein sce3302 1 None None None 162453224 Common - putative Oxidoreductase sce4948 87 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162449033 Nonpathogen - putative exported peptidase / protease sce0763 3 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 162449413 Common - hypothetical protein sce1143 27 None None None 162456099 Common - flavoprotein oxygenases, DIM6/NTAB family sce7817 70 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 162456855 Nonpathogen - hypothetical protein sce8572 2 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162456906 Nonpathogen putA Proline dehydrogenase sce8623 1 None None None 162455951 Nonpathogen - hypothetical protein sce7669 1 COG4907 COG4907, Predicted membrane protein Function unknown 162448580 Common - Predicted acetyltransferase involved in intracellular survival and related acetyltransferases/conserved hypothetical protein sce0310 20 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 162453908 Common - hypothetical protein sce5632 87 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 162449018 Common - Ricin precursor and Poly(3-hydroxybutyrate) depolymerase fusion sce0748 45 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162454906 Common - hypothetical protein sce6624 2 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 162456443 Common bioF2 putative 8-amino-7-oxononanoate synthase sce8160 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 162452627 Common glk hypothetical protein sce4351 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 162453795 Nonpathogen - hypothetical protein sce5519 1 None None None 162457333 Common - hypothetical protein sce9048 10 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 162450737 Nonpathogen - hypothetical protein sce2465 1 None None None 162453109 Common - Protein kinase sce4833 124 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455500 Common - sensor histidine kinase sce7218 199 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162456216 Common - acylphosphatase sce7933 146 COG1254 AcyP, Acylphosphatases Energy production and conversion 162449227 Common - hypothetical protein sce0957 32 COG3812 COG3812, Uncharacterized protein conserved in bacteria Function unknown 162454114 Common - Protein kinase sce5838 219 COG3899 COG3899, Predicted ATPase General function prediction only 162453248 Common - globin-like protein sce4972 66 COG2346 COG2346, Truncated hemoglobins General function prediction only 162453393 Nonpathogen - no similarity sce5117 1 None None None 162454500 Common - hypothetical protein sce6220 7 None None None 162453350 Common - Putative serineacetyltransferase sce5074 198 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 162450477 Nonpathogen - hypothetical protein sce2205 4 None None None 162449239 Nonpathogen - hypothetical protein sce0969 4 None None None 162457203 Common - glycosyltransferase sce8918 224 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162448452 Common - anti-anti sigma factor protein sce0182 115 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162457194 Nonpathogen - hypothetical protein sce8909 1 COG4850 COG4850, Uncharacterized conserved protein Function unknown 162457003 Nonpathogen - hypothetical protein sce8719 1 None None None 162448824 Common - putative secreted protein sce0554 7 None None None 162452472 Nonpathogen - hypothetical protein sce4197 1 None None None 162453467 Common - hypothetical protein sce5191 41 COG0439 AccC, Biotin carboxylase Lipid metabolism 162451689 Common - putative short chain dehydrogenase sce3417 230 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162457251 Nonpathogen - hypothetical protein sce8966 1 None None None 162448488 Nonpathogen - hypothetical protein sce0218 1 None None None 162456847 Nonpathogen - hypothetical protein sce8564 1 COG4907 COG4907, Predicted membrane protein Function unknown 162450081 Common - putative phosphohydrolase sce1810 36 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162448320 Common - hypothetical protein sce0051 41 COG0517 COG0517, FOG: CBS domain General function prediction only 162450152 Nonpathogen - hypothetical protein sce1881 1 None None None 162453172 Common - hypothetical protein sce4896 14 None None None 162455074 Nonpathogen - hypothetical protein sce6792 12 COG3664 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162448342 Common argB1 hypothetical protein sce0073 210 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 162454241 Nonpathogen - hypothetical protein sce5964 1 None None None 162456360 Common cbhA Cellulose 1,4-beta-cellobiosidase sce8077 18 COG5297 CelA, Cellobiohydrolase A (1,4-beta-cellobiosidase A) Carbohydrate transport and metabolism 162456051 Nonpathogen - hypothetical protein sce7769 1 None None None 162457122 Common - sigma-54 dependent DNA-binding response regulator sce8837 214 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457492 Common thrC hypothetical protein sce9206 116 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 162452218 Common - hypothetical protein sce3945 32 COG2261 COG2261, Predicted membrane protein Function unknown 162452943 Common - hypothetical protein sce4667 2 None None None 162455209 Nonpathogen - hypothetical protein sce6927 1 None None None 162456825 Common - hypothetical protein sce8542 36 COG4938 COG4938, Uncharacterized conserved protein Function unknown 162456054 Common - carboxylesterase sce7772 56 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162454602 Nonpathogen - hypothetical protein sce6322 1 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162456185 Common - hypothetical protein sce7902 19 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 162457018 Nonpathogen - putative secreted protein sce8733 4 None None None 162451601 Nonpathogen - hypothetical secreted protein sce3329 1 None None None 162452003 Common ilvB2 Acetolactate synthase sce3730 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 162456801 Nonpathogen - hypothetical protein sce8518 1 None None None 162449584 Common - putative carbonate hydratase sce1313 44 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 162455506 Nonpathogen - hypothetical protein sce7224 1 None None None 162452038 Nonpathogen - putative secreted protein sce3765 1 None None None 162453418 Common - hypothetical protein sce5142 43 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 162456118 Nonpathogen - putative secreted protein sce7835 1 None None None 162455123 Nonpathogen - hypothetical protein sce6841 1 None None None 162454268 Common - Protein kinase sce5991 188 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162456969 Common leuC2 3-isopropylmalate dehydratase sce8685 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 162456820 Nonpathogen - hypothetical protein sce8537 1 None None None 162454124 Common speE2 Probable spermidine synthase sce5848 27 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 162451392 Nonpathogen - hypothetical protein sce3120 1 None None None 162454164 Common - hypothetical protein sce5888 2 None None None 162451644 Common ansB L-asparaginase sce3372 119 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 162452834 Nonpathogen - hypothetical protein sce4558 12 None None None 162453787 Common - ABC transport system permease protein sce5511 90 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162456043 Common - sensor histidine kinase sce7761 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453063 Common ndhM1 probable NADH dehydrogenase subunit sce4787 206 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 162450557 Common - transcriptional regulator, MerR family sce2285 6 COG0789 SoxR, Predicted transcriptional regulators Transcription 162451057 Common - hypothetical protein sce2785 11 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 162455649 Nonpathogen - hypothetical protein sce7367 1 None None None 162457227 Nonpathogen - Tyrosinase sce8942 2 None None None 162448614 Common - Protein kinase sce0344 154 COG3899 COG3899, Predicted ATPase General function prediction only 162453832 Common - hypothetical protein sce5556 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 162451172 Common - Protein kinase sce2900 177 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162454397 Nonpathogen - hypothetical protein sce6118 1 COG4907 COG4907, Predicted membrane protein Function unknown 162449087 Common - two-component hybrid histidine kinase sce0817 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451700 Common - Protein kinase sce3428 128 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450393 Common fabG4 putative 3-oxoacyl-[acyl-carrier-protein] reductase sce2121 207 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162448648 Common sppA1 protease IV sce0378 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162452966 Common - Putative sugar regulator sce4690 68 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162454454 Common - sigma-54 dependent DNA-binding response regulator sce6174 215 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162451191 Common - tetratricopeptide repeat family protein sce2919 58 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162452552 Nonpathogen - hypothetical protein sce4276 1 None None None 162453760 Common - two component sensor kinase sce5484 138 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453768 Common xylG ABC transporter, nucleotide binding/ATPase protein sce5492 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162449265 Nonpathogen - exported protein with glycine-rich C-terminal domain sce0995 3 None None None 162451587 Nonpathogen - hypothetical conserved secreted protein sce3315 5 None None None 162453709 Nonpathogen - hypothetical protein sce5433 1 COG4907 COG4907, Predicted membrane protein Function unknown 162453054 Common - Protein kinase sce4778 112 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448981 Common - hypothetical protein sce0711 65 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162455422 Common - hypothetical protein sce7140 27 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162449117 Nonpathogen - hypothetical protein sce0847 1 None None None 162449859 Common - Cytochrome P450 CYP260A1 sce1588 83 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162455144 Nonpathogen - glycine-rich protein sce6862 1 None None None 162453178 Common - hypothetical protein sce4902 7 None None None 162448297 Common - hypothetical protein sce0028 139 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 162449591 Nonpathogen - putative secreted protein sce1320 3 COG5373 COG5373, Predicted membrane protein Function unknown 162454018 Nonpathogen - hypothetical protein sce5742 1 None None None 162454805 Nonpathogen - ECF-family RNA polymerase sigma factor sce6523 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456578 Common cysH Phosphoadenylyl-sulfate reductase (thioredoxin) sce8295 116 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 162456367 Nonpathogen feoA ferrous iron transport protein A sce8084 1 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 162455282 Common - probable beta-lactam antibiotic acylase family protein sce7000 75 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 162453757 Nonpathogen - hypothetical protein sce5480 1 None None None 162454312 Common gnd2 Phosphogluconate dehydrogenase (decarboxylating) sce6035 142 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 162455558 Nonpathogen - hypothetical protein sce7276 1 None None None 162449927 Common mraZ MraZ protein sce1656 148 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 162452202 Common betC choline sulfatase sce3929 92 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 162454740 Nonpathogen - hypothetical protein sce6458 1 None None None 162454843 Common gor Glutathione-disulfide reductase sce6561 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 162451357 Nonpathogen - hypothetical protein sce3085 1 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 162453201 Common - hypothetical protein sce4925 3 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 162453558 Common - Butyryl-CoA dehydrogenase sce5282 139 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162455789 Nonpathogen - hypothetical protein sce7507 1 None None None 162451364 Nonpathogen - hypothetical protein sce3092 1 None None None 162452620 Common - hypothetical protein, similar to thioredoxin reductase sce4344 39 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 162455935 Common - oligoribonuclease sce7653 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 162451960 Nonpathogen - hypothetical protein sce3687 1 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 162455847 Common - hypothetical protein sce7565 65 COG5394 COG5394, Uncharacterized protein conserved in bacteria Function unknown 162449148 Common - hypothetical protein sce0878 67 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162448933 Common serB hypothetical protein sce0663 154 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 162456786 Nonpathogen - hypothetical protein sce8503 1 None None None 162453095 Common - anti-anti sigma factor protein sce4819 38 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162449214 Common - Protein kinase sce0944 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457162 Nonpathogen - hypothetical protein sce8877 9 None None None 162449655 Common - putative secreted protein sce1384 5 None None None 162450038 Nonpathogen - hypothetical protein sce1767 1 None None None 162452134 Common - transcriptional regulator, MerR family sce3861 110 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162455911 Common - hypothetical protein sce7629 5 COG2006 COG2006, Uncharacterized conserved protein Function unknown 162455780 Common fabG12 putative 3-oxoacyl-[acyl-carrier-protein] reductase sce7498 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162452865 Nonpathogen - putative secreted protein sce4589 1 None None None 162450106 Nonpathogen - hypothetical protein sce1835 1 None None None 162451810 Common gltP proton glutamate symport protein sce3537 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 162449249 Common - Metallothiol transferase fosB sce0979 21 None None None 162454346 Nonpathogen - hypothetical protein sce6069 1 COG2425 COG2425, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162455894 Common - predicted GTP-binding protein sce7612 173 COG0218 COG0218, Predicted GTPase General function prediction only 162456960 Nonpathogen - pseudogene sce_pseudo_14 3 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 162456348 Common - putative Metal-dependent phosphohydrolase sce8065 187 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 162452761 Nonpathogen - hypothetical protein sce4485 1 None None None 162449407 Common - two-component sensor histidine kinase sce1137 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162456812 Common - Nudix/MutT family protein sce8529 153 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162455059 Common - hypothetical protein sce6777 16 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162449452 Common - hypothetical protein sce1182 9 None None None 162450859 Common resA1 Thiol-disulfide oxidoreductase resA. sce2587 165 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162450416 Common - hypothetical protein sce2144 23 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162448704 Common - transcriptional regulator, GntR family sce0434 203 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162450009 Nonpathogen - hypothetical protein sce1737 1 None None None 162451265 Common aglR1 adventurous gliding motility protein R sce2993 121 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 162448381 Common - conserved exported carbohydrate-binding protein,Rhs family sce0111 47 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162450728 Nonpathogen - hypothetical protein sce2456 2 None None None 162455473 Nonpathogen - PE-PGRS family protein sce7191 2 COG4907 COG4907, Predicted membrane protein Function unknown 162450886 Common - hypothetical protein sce2614 36 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162455679 Common uvrC excinuclease ABC, subunit C sce7397 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 162455207 Nonpathogen - hypothetical protein sce6925 13 COG4325 COG4325, Predicted membrane protein Function unknown 162455675 Common - DNA/pantothenate metabolism flavoprotein sce7393 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 162451005 Common - Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) sce2733 93 COG4639 COG4639, Predicted kinase General function prediction only 162452283 Common - Protein kinase sce4010 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449132 Common - glycosyltransferase sce0862 155 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162451972 Common - hypothetical protein sce3699 173 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 162456709 Common - hypothetical protein sce8426 4 None None None 162457005 Common - hypothetical protein sce8721 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162453398 Common - hypothetical protein sce5122 7 None None None 162449267 Common - putative SAM-dependent methyltransferse sce0997 6 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162452396 Common - LysR-family transcriptional regulator sce4120 124 COG0583 LysR, Transcriptional regulator Transcription 162453070 Common pckA2 hypothetical protein sce4794 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 162455587 Common pepM Phosphoenolpyruvate mutase sce7305 139 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 162449254 Nonpathogen - hypothetical protein sce0984 1 None None None 162456459 Nonpathogen - hypothetical protein sce8176 1 None None None 162448379 Common - hypothetical protein sce0109 18 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162450383 Nonpathogen - hypothetical protein sce2111 1 None None None 162454328 Nonpathogen - hypothetical protein sce6051 1 COG5373 COG5373, Predicted membrane protein Function unknown 162449983 Common - exonuclease sce1712 140 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 162451959 Nonpathogen - hypothetical protein sce3686 1 None None None 162449985 Common coaD Pantetheine-phosphate adenylyltransferase sce1714 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 162455724 Common - dehydrogenase of unknown specificity sce7442 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162455377 Nonpathogen - hypothetical protein sce7095 1 None None None 162450582 Nonpathogen - Alanine/aginine-rich protein sce2310 1 None None None 162457055 Nonpathogen - hypothetical protein sce8770 1 None None None 162457452 Nonpathogen - hypothetical protein sce9165 1 None None None 162455981 Common - hypothetical protein sce7699 17 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 162455297 Nonpathogen - hypothetical protein sce7015 1 None None None 162454796 Common - hypothetical protein sce6514 58 COG3825 COG3825, Uncharacterized protein conserved in bacteria Function unknown 162448633 Common - Protein kinase sce0363 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450995 Nonpathogen - hypothetical protein sce2723 1 None None None 162449711 Nonpathogen - putative terpene cyclase sce1440 10 None None None 162454581 Nonpathogen - hypothetical protein sce6301 4 None None None 162452926 Common yjdI EbsC protein sce4650 118 COG2606 EbsC, Uncharacterized conserved protein Function unknown 162448357 Common - transcriptional regulator, LysR family sce0087 174 COG0583 LysR, Transcriptional regulator Transcription 162449829 Common - transcriptional regulator, LysR family sce1558 109 COG0583 LysR, Transcriptional regulator Transcription 162455224 Nonpathogen - hypothetical protein sce6942 1 None None None 162455325 Common pheA2 P-protein (prephenate dehydratase / chorismate mutase) sce7043 203 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 162448729 Nonpathogen - hypothetical protein sce0459 1 None None None 162452306 Nonpathogen - glycine-rich protein sce4032 3 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 162457639 Nonpathogen - hypothetical protein sce9353 1 None None None 162451861 Nonpathogen - hypothetical protein sce3588 1 None None None 162452427 Common - permease of the major facilitator superfamily sce4151 106 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162449237 Nonpathogen - hypothetical protein sce0967 4 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 162450777 Nonpathogen - hypothetical protein sce2505 3 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162452808 Nonpathogen - hypothetical protein sce4532 1 None None None 162454296 Common - Amidohydrolase family protein sce6019 63 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 162453520 Nonpathogen - PE_PGRS family protein sce5244 1 None None None 162450721 Nonpathogen - hypothetical protein sce2450 1 None None None 162456477 Nonpathogen - hypothetical protein sce8194 5 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 162449771 Common - hypothetical protein-signal peptide sce1500 7 None None None 162450428 Common - hypothetical protein sce2156 97 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 162454471 Nonpathogen - hypothetical protein sce6191 1 None None None 162448454 Common - Protein kinase sce0184 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455908 Common - Acyl-CoA dehydrogenase sce7626 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162449197 Common - TonB-dependent receptor, putative sce0927 27 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162449137 Common - hypothetical protein sce0867 29 COG1099 COG1099, Predicted metal-dependent hydrolases with the TIM-barrel fold General function prediction only 162449310 Common rnhA Ribonuclease H sce1040 163 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 162451740 Common - hypothetical protein sce3467 146 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 162457490 Nonpathogen - hypothetical protein sce9204 1 None None None 162450359 Nonpathogen - hypothetical protein sce2087 11 None None None 162456774 Common narB2 Nitrate reductase sce8491 186 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 162454885 Common - ECF-family RNA polymerase sigma factor sce6603 10 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455163 Nonpathogen yfiM hypothetical protein sce6881 1 COG5544 COG5544, Predicted periplasmic lipoprotein General function prediction only 162449229 Common - hypothetical protein sce0959 118 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 162453416 Common - Protein kinase sce5140 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449077 Nonpathogen - hypothetical protein sce0807 1 None None None 162457603 Common - hypothetical protein sce9317 18 None None None 162450016 Common - hypothetical protein sce1745 67 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 162448388 Nonpathogen - hypothetical protein sce0118 1 None None None 162450586 Nonpathogen - hypothetical protein sce2314 1 None None None 162453032 Common - aldo/keto reductase sce4756 202 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 162451848 Common - Butyryl-CoA dehydrogenase sce3575 152 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162453289 Common - Protein kinase sce5013 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455382 Common - hypothetical protein sce7100 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 162452164 Nonpathogen - trypsin sce3891 1 None None None 162450399 Common - hypothetical protein sce2127 13 None None None 162450014 Nonpathogen - hypothetical protein sce1743 1 None None None 162453409 Common - Protein kinase sce5133 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455231 Nonpathogen - hypothetical protein sce6949 1 None None None 162450371 Common - hypothetical protein sce2099 38 None None None 162456646 Common - glycosyl transferase, group 2 family protein sce8363 132 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 162449478 Common - hypothetical protein sce1208 50 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162450950 Common - two-component histidine kinase sce2678 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162448722 Nonpathogen - hypothetical protein sce0452 1 None None None 162452612 Nonpathogen - hypothetical protein sce4336 1 None None None 162452316 Nonpathogen - hypothetical protein sce4042 1 None None None 162448483 Common cbiA Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolyzing) sce0213 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 162452743 Common pilB type IV pilus biogenesis protein PilB sce4467 206 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 162449030 Nonpathogen - hypothetical protein sce0761 1 None None None 162457115 Nonpathogen - hypothetical protein sce8830 1 None None None 162451016 Nonpathogen - mucin sce2744 2 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 162449277 Nonpathogen - Photoactive yellow protein (PYP) sce1007 6 None None None 162455083 Common - hypothetical protein sce6801 35 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 162449180 Nonpathogen - hypothetical protein sce0910 1 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 162455623 Common - hypothetical protein sce7341 135 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 162457589 Common potC2 spermidine/putrescine ABC transporter, permease protein sce9303 183 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 162452684 Common pbp2 penicillin-binding protein sce4408 200 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 162453090 Nonpathogen - hypothetical protein sce4814 1 None None None 162451124 Nonpathogen - hypothetical protein sce2852 1 None None None 162457649 Common atpF1 H(+)-transporting two-sector ATPase sce9363 24 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 162449917 Nonpathogen - hypothetical protein sce1645 1 None None None 162452619 Nonpathogen - hypothetical protein sce4343 1 None None None 162454250 Common - Succinate-semialdehyde dehydrogenase (NAD(P)(+)) sce5973 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162449992 Common - hypothetical protein sce1721 11 COG4870 COG4870, Cysteine protease Posttranslational modification, protein turnover, chaperones 162449065 Common - hypothetical protein sce0795 7 None None None 162449978 Nonpathogen - probable histone H1 protein sce1707 1 None None None 162452375 Common - transcriptional regulator, LuxR family sce4099 102 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 162456159 Common - Sensor histidine kinase sce7876 152 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454134 Nonpathogen - hypothetical protein sce5858 1 None None None 162456564 Common cis2 hypothetical protein sce8281 194 COG0372 GltA, Citrate synthase Energy production and conversion 162456035 Nonpathogen - hypothetical protein sce7753 1 None None None 162451438 Common - GTP-binding protein HflX sce3166 214 COG2262 HflX, GTPases General function prediction only 162456886 Common - putative ABC transport protein, permease component sce8603 140 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 162455997 Common - hypothetical protein sce7715 69 COG1738 COG1738, Uncharacterized conserved protein Function unknown 162456111 Nonpathogen - hypothetical protein sce7828 1 None None None 162456164 Nonpathogen - hypothetical protein sce7881 1 None None None 162448685 Nonpathogen - hypothetical protein sce0415 4 None None None 162456770 Common - ECF-family RNA polymerase sigma factor sce8487 80 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452439 Common - LysR-family transcriptional regulator sce4163 175 COG0583 LysR, Transcriptional regulator Transcription 162455574 Common - putative membrane bound zinc metallopeptidase sce7292 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 162450376 Nonpathogen - hypothetical protein sce2104 1 None None None 162451244 Nonpathogen - hypothetical protein sce2972 1 None None None 162451801 Common mgtE putative cation transport protein sce3528 13 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 162450712 Common - hypothetical protein sce2440 31 None None None 162454390 Nonpathogen - hypothetical protein sce6111 1 None None None 162455652 Nonpathogen - hypothetical protein-transmembrane prediction sce7370 5 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 162457594 Common - hypothetical protein sce9308 27 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162456060 Common - Maltose/maltodextrin transport permease homologue sce7778 140 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 162455686 Common rpsI hypothetical protein sce7404 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 162449728 Nonpathogen - hypothetical protein sce1457 1 None None None 162451913 Nonpathogen - hypothetical protein sce3640 2 None None None 162453544 Common - hypothetical protein sce5268 60 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 162455712 Common - ribonuclease R sce7430 192 COG0557 VacB, Exoribonuclease R Transcription 162452581 Common gdhA1 Glutamate dehydrogenase sce4305 180 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 162455037 Common - methyltransferase sce6755 159 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162453310 Common - ECF-family RNA polymerase sigma factor sce5034 146 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448995 Common - hypothetical protein sce0725 31 COG3812 COG3812, Uncharacterized protein conserved in bacteria Function unknown 162450461 Nonpathogen - hypothetical protein sce2189 3 None None None 162452651 Nonpathogen - hypothetical protein sce4375 2 None None None 162454697 Common - RNA polymerase sigma-70 factor, ECF subfamily sce6417 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 162452155 Common mxcB iron utilization protein sce3882 64 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 162455588 Common comD hypothetical protein sce7306 35 COG4032 COG4032, Predicted thiamine-pyrophosphate-binding protein General function prediction only 162456263 Common atpC2 H(+)-transporting two-sector ATPase sce7980 16 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 162450187 Common - pseudogene sce_pseudo_02 34 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162450508 Common - putative two-component system sensor kinase sce2236 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162450113 Common - Oxidoreductase sce1842 149 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 162454756 Nonpathogen - hypothetical protein sce6474 1 None None None 162456382 Common - hypothetical protein sce8099 9 None None None 162451669 Common - IstB-like ATP-binding protein sce3397 38 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162457457 Common - hypothetical protein sce9171 6 None None None 162451965 Common - probable glutathione S-transferase sce3692 67 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162450562 Common - hypothetical protein sce2290 109 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162453536 Common - hypothetical protein sce5260 14 COG4305 COG4305, Endoglucanase C-terminal domain/subunit and related proteins Carbohydrate transport and metabolism 162455969 Common - ATP-dependent helicase sce7687 236 COG1201 Lhr, Lhr-like helicases General function prediction only 162448505 Common cbiG Uroporphyrin-III C-methyltransferase sce0235 89 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 162452753 Common aspB1 Aspartate transaminase sce4477 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 162452524 Common pilT1 putative twitching motility protein PilT sce4248 186 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 162451036 Nonpathogen - hypothetical protein sce2764 8 COG0456 RimI, Acetyltransferases General function prediction only 162451907 Nonpathogen - hypothetical protein sce3634 1 None None None 162456325 Nonpathogen - putative secreted protein sce8042 1 None None None 162451635 Nonpathogen - putative secreted protein sce3363 1 None None None 162454461 Common - Electron-transferring-flavoprotein dehydrogenase sce6181 25 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 162455543 Common kamA2 Lysine 2,3-aminomutase sce7261 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 162456406 Common - hypothetical protein sce8123 91 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 162449944 Common - Probable serine protease sce1673 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162451041 Common adh2 Class III alcohol dehydrogenase sce2769 211 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 162453759 Nonpathogen - putative two-component system response regulator sce5483 3 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450317 Common - hypothetical protein sce2045 35 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 162457274 Nonpathogen - hypothetical protein sce8989 8 None None None 162457526 Nonpathogen - putative secreted protein sce9240 1 None None None 162449955 Common - hypothetical protein sce1684 20 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162453376 Common - two-component hybrid histidine kinase sce5100 222 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 162449041 Common - hypothetical protein sce0771 3 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 162451603 Common pitX1 Putative Pit accessory protein sce3331 70 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 162454810 Common - ABC transporter, ATP-binding protein sce6528 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162454122 Common - hypothetical protein sce5846 9 None None None 162450639 Common - transcriptional regulator, LacI family sce2367 129 COG1609 PurR, Transcriptional regulators Transcription 162454997 Common - putative secreted protein sce6715 117 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162455647 Nonpathogen - hypothetical protein sce7365 1 None None None 162452236 Common - putative ABC transport system ATP-binding protein sce3963 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 162457426 Common - putative oxidoreductase sce9140 160 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 162457515 Common - Putative esterase/lipase sce9229 121 COG0657 Aes, Esterase/lipase Lipid metabolism 162456929 Nonpathogen - hypothetical protein sce8646 1 None None None 162449172 Common celG Cellulase sce0902 10 COG2730 BglC, Endoglucanase Carbohydrate transport and metabolism 162456378 Common - probable cation efflux system transmembrane protein sce8095 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 162454106 Common - Putative peptidase sce5830 100 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 162456976 Common pilD Prepilin peptidase sce8692 121 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162457362 Common - transcriptional regulator, ArsR family sce9077 59 COG0640 ArsR, Predicted transcriptional regulators Transcription 162453377 Common - hypothetical protein sce5101 53 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162448858 Common - Probable MaoC family protein sce0588 61 COG2030 MaoC, Acyl dehydratase Lipid metabolism 162450770 Common - ECF-family RNA polymerase sigma factor sce2498 38 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452508 Common - Predicted phosphatase/putative hydrolase sce4232 126 COG0546 Gph, Predicted phosphatases General function prediction only 162453325 Common - BON domain hypothetical protein sce5050 3 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 162456431 Common - hypothetical protein sce8148 9 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162454289 Common - two-component sensor histidine kinase sce6012 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 162450980 Nonpathogen - hypothetical protein sce2708 1 None None None 162452258 Common - positive regulator of sigma-B activity sce3985 118 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454042 Common - putative P-loop ATPase sce5766 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 162448943 Common - pectinacetylesterase, putative sce0673 14 None None None 162450336 Common - Asparagine synthetase sce2064 151 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 162455516 Common resA2 resA protein sce7234 126 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162450635 Nonpathogen - hypothetical protein sce2363 3 None None None 162454465 Nonpathogen pilP putative typeIV pilus assembly protein pilP sce6185 1 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 162448577 Common - Protein kinase sce0307 204 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162454354 Common - hypothetical protein sce6077 20 COG3007 COG3007, Uncharacterized paraquat-inducible protein B Function unknown 162455734 Nonpathogen - hypothetical protein sce7452 2 None None None 162450979 Common - hypothetical protein sce2707 3 None None None 162456663 Nonpathogen - hypothetical protein sce8380 1 None None None 162452700 Nonpathogen - hypothetical protein sce4424 2 None None None 162452780 Common lon4 ATP-dependent protease La sce4504 202 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 162449703 Common - Protein kinase sce1432 206 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162455257 Nonpathogen - hypothetical protein sce6975 1 None None None 162451988 Common - ABC transporter, ATP-binding protein sce3715 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162450421 Nonpathogen - hypothetical protein sce2149 1 None None None 162454606 Common - hypothetical protein sce6326 28 COG3817 COG3817, Predicted membrane protein Function unknown 162455159 Common cmk hypothetical protein sce6877 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 162453556 Common - Uncharacterized protein, linocin/CFP29 homolog sce5280 19 COG1659 COG1659, Uncharacterized protein, linocin/CFP29 homolog Function unknown 162450203 Common mnhF Na+/H+ antiporter sce1931 37 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 162454733 Common prc1 C-terminal processing peptidase. sce6451 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162456268 Nonpathogen - hypothetical protein sce7985 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162456603 Nonpathogen - hypothetical protein sce8320 4 COG1510 COG1510, Predicted transcriptional regulators Transcription 162457045 Common - hypothetical protein sce8760 2 None None None 162450769 Nonpathogen - ECF-family RNA polymerase sigma factor sce2497 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450803 Nonpathogen - putative secreted protein sce2531 2 None None None 162450620 Nonpathogen - hypothetical protein sce2348 3 None None None 162456990 Nonpathogen - hypothetical protein sce8706 1 None None None 162453813 Common - transposase-like protein sce5537 8 None None None 162448949 Nonpathogen - none sce0679 1 None None None 162452971 Nonpathogen - hypothetical protein sce4695 1 None None None 162450862 Common - predicted subtilisin like protease sce2590 29 None None None 162457308 Common dksA2 putative dnaK suppressor protein sce9023 142 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 162448914 Common fusA1 Elongation factor (EF) sce0644 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 162457258 Common ycaQ hypothetical protein sce8973 60 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 162448749 Nonpathogen - hypothetical protein sce0479 3 None None None 162450668 Nonpathogen - hypothetical protein sce2396 1 None None None 162452121 Common - beta-alanine synthetase sce3848 143 COG0388 COG0388, Predicted amidohydrolase General function prediction only 162449324 Nonpathogen - hypothetical protein sce1054 1 None None None 162449715 Common pepN1 aminopeptidase sce1444 137 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 162452843 Common pacL1 cation-transporting ATPase, E1-E2 family sce4567 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 162449667 Common - CheA-like histidine kinase sce1396 157 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162450060 Common thiE1 Thiamine-phosphate diphosphorylase sce1789 205 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 162455959 Nonpathogen - hypothetical protein sce7677 3 None None None 162455881 Common cysI sulfite reductase (ferredoxin) sce7599 175 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 162448768 Nonpathogen - hypothetical protein sce0498 1 None None None 162450825 Common uppS1 Undecaprenyl pyrophosphate synthetase sce2553 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 162455360 Common - transcriptional regulator, TetR family sce7078 54 COG1309 AcrR, Transcriptional regulator Transcription 162451304 Nonpathogen - hypothetical protein sce3032 1 None None None 162448431 Common - transcriptional regulator, AraC family sce0161 42 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162452601 Common - putative peptidyl-prolyl cis-trans isomerase sce4325 195 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 162455104 Common - serine protease sce6822 15 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162450982 Common rnk regulator of nucleoside diphosphate kinase sce2710 104 COG0782 GreA, Transcription elongation factor Transcription 162454422 Common - IstB-like ATP-binding protein sce6142 33 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162456526 Common faa Fumarylacetoacetase family protein sce8243 122 COG3970 COG3970, Fumarylacetoacetate (FAA) hydrolase family protein General function prediction only 162449167 Common lon1 ATP-dependent protease La sce0897 214 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 162453255 Common - DNA-binding protein sce4979 102 COG1476 COG1476, Predicted transcriptional regulators Transcription 162450463 Common cyc2 Cytochrome P450 CYP262A1 sce2191 79 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162455988 Common - hypothetical protein sce7706 63 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 162455523 Nonpathogen - hypothetical protein sce7241 1 None None None 162456738 Common - transcriptional regulator, LysR family sce8454 111 COG0583 LysR, Transcriptional regulator Transcription 162457047 Nonpathogen - hypothetical protein sce8762 1 None None None 162455171 Common - putative sulfate transporter, SulP family sce6889 160 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 162448327 Common - hypothetical protein sce0058 45 None None None 162454819 Common - hypothetical protein sce6537 3 None None None 162456452 Common - hypothetical protein sce8169 19 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454954 Nonpathogen - hypothetical protein sce6672 2 None None None 162450789 Common rplS hypothetical protein sce2517 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 162451077 Common acrB probable membrane protein sce2805 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 162456628 Common bsaA glutathione peroxidase sce8345 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 162449481 Common ggt1 Gamma-glutamyltransferase sce1211 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 162451312 Common - hypothetical protein sce3040 12 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162457446 Common potA1 spermidine/putrescine transport system ATP-binding protein sce9160 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 162448497 Common - hypothetical protein sce0227 39 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162450056 Common crt putative enoyl-CoA hydratase/isomerase family protein sce1786 172 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162450367 Common - hypothetical protein sce2095 36 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162456205 Common rplU 50S ribosomal protein L21 sce7922 200 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 162457629 Common - hypothetical protein sce9343 17 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 162456502 Common - AMP-dependent synthetase and ligase sce8219 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162448655 Common - two-component sensor histidine kinase sce0385 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162451410 Common - hypothetical protein sce3138 2 None None None 162449343 Nonpathogen - hypothetical protein sce1073 1 None None None 162453319 Common pabB Para-aminobenzoate synthase sce5043 238 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 162455290 Common - hypothetical protein sce7008 116 COG1690 RtcB, Uncharacterized conserved protein Function unknown 162450577 Nonpathogen - hypothetical protein sce2305 1 None None None 162455611 Common yfhO cysteine desulfurase sce7329 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 162457570 Common - putative cytochrome c peroxidase sce9284 11 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162456872 Common - transcriptional regulator, AraC family sce8589 72 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162450884 Common - hypothetical protein sce2612 168 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 162456339 Common hemK putative methyltransferase HemK sce8056 224 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 162453894 Common pyrG2 CTP synthase sce5618 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 162454674 Common - putative Hydroxymethylglutaryl-CoA synthase sce6394 94 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 162450269 Common - putative Acyl-CoA dehydrogenase sce1997 151 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162451716 Common - hypothetical protein sce3444 114 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162457323 Nonpathogen - hypothetical protein sce9038 3 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162457277 Common - FHA domain protein sce8992 43 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162450795 Common rpmH 50S ribosomal protein L34 sce2523 192 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 162453199 Nonpathogen - hypothetical secreted protein sce4923 1 None None None 162449497 Common cheW2 purine-binding chemotaxis protein CheW sce1227 114 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 162457640 Common - Protein kinase sce9354 134 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454773 Common - moaA/nifB/pqqE family protein sce6491 113 COG1964 COG1964, Predicted Fe-S oxidoreductases General function prediction only 162457301 Common - Nif-specific regulatory protein sce9016 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162456127 Common - putative capK; capsular polysaccharide biosynthesis protein sce7844 172 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 162455012 Nonpathogen - putative exported protease precursor sce6730 2 None None None 162450246 Common - hypothetical protein sce1974 24 COG0730 COG0730, Predicted permeases General function prediction only 162450762 Common dak2 Glycerone kinase, DAK2 domain sce2490 75 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 162453800 Nonpathogen - putative secreted protein sce5524 1 None None None 162449205 Nonpathogen - hypothetical protein sce0935 1 None None None 162457106 Common - hypothetical protein sce8821 5 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 162455179 Common - hypothetical protein sce6897 123 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 162449742 Nonpathogen - hypothetical protein sce1471 2 None None None 162453752 Nonpathogen - hypothetical protein sce5476 1 None None None 162456554 Common - hypothetical protein sce8271 81 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162454746 Common - Hsp70 heat shock protein sce6464 41 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162452788 Common - Protein kinase sce4512 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450617 Nonpathogen - hypothetical protein sce2345 1 None None None 162452733 Common - DNA ligase sce4457 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 162453114 Nonpathogen - hypothetical protein sce4838 1 COG3253 COG3253, Uncharacterized conserved protein Function unknown 162451189 Nonpathogen - hypothetical protein sce2917 1 None None None 162454862 Nonpathogen - membrane protein patially similar to DPM glycosyltransferases sce6580 1 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162457232 Common - hypothetical protein sce8947 2 None None None 162451420 Common clpX ATP-dependent Clp protease, ATP-binding subunit ClpX sce3148 223 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 162453410 Common valS hypothetical protein sce5134 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162454876 Common - probabla enoyl-CoA hydratase sce6594 12 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162448624 Nonpathogen - hypothetical protein sce0354 3 None None None 162450515 Common - hypothetical protein sce2243 23 None None None 162450964 Common - sigma-54 dependent transcriptional regulator/response regulator sce2692 213 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162452205 Nonpathogen - putative secreted protein sce3932 1 None None None 162454401 Common - hypothetical protein sce6122 4 None None None 162453774 Common pgm3 hypothetical protein sce5498 225 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 162452564 Nonpathogen - formin sce4288 1 None None None 162454613 Common - putative aldehyde dehydrogenase sce6333 101 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 162448800 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase sce0530 122 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162448720 Common - putative oxidoreductase sce0450 19 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162452459 Common - Protein kinase sce4183 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454641 Common - putative monooxygenase sce6361 72 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162452113 Common rluB Pseudouridine synthase sce3840 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 162452278 Common - Glycosyl hydrolases family 11 member sce4005 8 None None None 162453976 Nonpathogen - no similarity sce5700 1 None None None 162451515 Common - hypothetical protein sce3243 128 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162457239 Nonpathogen - hypothetical protein sce8954 1 COG3826 COG3826, Uncharacterized protein conserved in bacteria Function unknown 162451788 Nonpathogen - hypothetical protein sce3515 1 None None None 162452111 Common - hypothetical protein sce3838 4 COG5373 COG5373, Predicted membrane protein Function unknown 162449613 Nonpathogen - hypothetical protein sce1342 1 None None None 162451781 Common ydgG putative transport protein sce3508 105 COG0628 PerM, Predicted permease General function prediction only 162452287 Nonpathogen - putative secreted protein sce4014 1 None None None 162455663 Nonpathogen - putative PE-PGRS family protein sce7381 1 None None None 162454410 Nonpathogen - hypothetical protein sce6131 3 None None None 162455618 Common - hypothetical protein sce7336 39 COG3652 COG3652, Predicted outer membrane protein Function unknown 162449507 Common - hypothetical protein sce1237 19 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162454282 Common - ranscriptional regulator, PadR family sce6005 44 COG1695 COG1695, Predicted transcriptional regulators Transcription 162456887 Common - branched-chain amino acid ABC transporter, ATP-binding protein sce8604 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 162451505 Nonpathogen - hypothetical protein sce3233 1 None None None 162454112 Nonpathogen - hypothetical protein sce5836 2 None None None 162451725 Nonpathogen - hypothetical protein sce3452 4 None None None 162450523 Nonpathogen - hypothetical protein sce2251 3 None None None 162454458 Common - hypothetical protein sce6178 34 COG4805 COG4805, Uncharacterized protein conserved in bacteria Function unknown 162456426 Nonpathogen - hypothetical protein sce8143 1 None None None 162451141 Common - putative secreted protein sce2869 8 COG4907 COG4907, Predicted membrane protein Function unknown 162456284 Common - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) sce8001 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 162453443 Common - sensor histidine kinase sce5167 224 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162454363 Nonpathogen - hypothetical protein sce6086 1 None None None 162451560 Common - two-component response regulator sce3288 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162449629 Nonpathogen - hypothetical protein sce1358 1 None None None 162453748 Common pspA similar to chloroplast membrane-associated 30 kD protein sce5472 73 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 162456636 Common - hypothetical protein sce8353 64 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162453151 Nonpathogen - hypothetical protein sce4875 1 None None None 162452146 Nonpathogen - WD-repeat protein sce3873 5 None None None 162455963 Nonpathogen - HTH-type transcriptional regulator cueR sce7681 7 COG0789 SoxR, Predicted transcriptional regulators Transcription 162450597 Common - hypothetical protein sce2325 125 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 162455155 Nonpathogen - hypothetical protein sce6873 1 None None None 162455091 Common - hypothetical protein sce6809 128 COG1678 COG1678, Putative transcriptional regulator Transcription 162448694 Common - hypothetical protein sce0424 50 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162454377 Common - hypothetical protein sce6100 4 None None None 162449648 Nonpathogen - hypothetical protein sce1377 1 None None None 162455725 Common - hypothetical protein sce7443 53 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162456807 Common purM Phosphoribosylformylglycinamidine cyclo-ligase sce8524 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 162449766 Common - putative beta-lactamase sce1495 141 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162450937 Common - Isochorismatase sce2665 111 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162451928 Common - hypothetical protein sce3655 6 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 162448743 Nonpathogen - hypothetical protein sce0473 4 None None None 162452512 Common ileS isoleucyl-tRNA synthetase Ia sce4236 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162454003 Common - glycosyltransferase sce5727 24 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162457403 Nonpathogen - hypothetical protein sce9117 1 None None None 162450901 Nonpathogen - putative secreted protein sce2629 1 None None None 162456096 Nonpathogen - hypothetical protein sce7814 1 None None None 162455396 Common - Protein kinase sce7114 160 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449863 Nonpathogen - hypothetical protein sce1592 6 None None None 162455062 Common - hypothetical protein sce6780 18 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162453716 Common - putative secreted protein sce5440 3 None None None 162456311 Common dapB hypothetical protein sce8028 216 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 162456731 Nonpathogen - putative secreted protein sce8448 1 None None None 162450630 Common - hypothetical protein sce2358 69 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162450554 Common - transposase sce2282 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162449403 Common modC ABC-type molybdate transporter, ATP-binding protein sce1133 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 162449935 Common murG UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase sce1664 204 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 162448868 Common - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase sce0598 78 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162452804 Nonpathogen - hypothetical protein sce4528 1 None None None 162453192 Common - putative amino acid permease sce4916 45 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 162455533 Common alr hypothetical protein sce7251 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 162451544 Common - transcriptional regulator, AraC family sce3272 92 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162452871 Common - hypothetical protein sce4595 7 None None None 162455114 Common - Beta-lactamase-like protein sce6832 14 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162449999 Common - hypothetical protein sce1728 127 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162450493 Common - hypothetical protein sce2221 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162452792 Common - putative oxidoreductase, iron-sulfur binding sce4516 127 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 162457497 Common gspK general secretion pathway protein K sce9211 5 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 162448815 Common - helicase, putative sce0545 226 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162449002 Nonpathogen - transcriptional regulator, AraC family sce0732 4 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162453837 Common - putative transposase sce5561 53 None None None 162454904 Common - transposase sce6622 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162457097 Common - probable short-chain dehydrogenase sce8812 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162449398 Common - hypothetical protein sce1128 11 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162450613 Common - hypothetical protein sce2341 7 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162452494 Common nuoN1 NADH dehydrogenase (ubiquinone) sce4218 203 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 162449070 Nonpathogen - hypothetical protein sce0800 1 None None None 162452269 Common - transcriptional regulator, Cro/CI family sce3996 31 COG1396 HipB, Predicted transcriptional regulators Transcription 162456104 Nonpathogen - pseudogene sce_pseudo_13 1 None None None 162456178 Nonpathogen - putative secreted protein sce7895 1 COG5373 COG5373, Predicted membrane protein Function unknown 162450409 Common - hypothetical protein sce2137 17 None None None 162449418 Common - Probable BNR/Asp-box repeat domain sce1148 57 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162455691 Common nhaA2 hypothetical protein sce7409 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 162451577 Common - put. Sugar transport system permease sce3305 111 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162453573 Nonpathogen - hypothetical protein sce5297 1 None None None 162454617 Nonpathogen - TPR-like hypothetical protein sce6337 1 None None None 162454797 Nonpathogen - hypothetical protein sce6515 2 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 162451833 Nonpathogen - hypothetical protein sce3560 4 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454199 Common - oxoacyl-(acyl-carrier-protein) synthase II sce5922 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162453176 Common adh5 Alcohol dehydrogenase sce4900 200 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 162453706 Common - hypothetical protein sce5430 10 None None None 162451767 Common - ECF-family RNA polymerase sigma factor sce3494 66 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456769 Nonpathogen - ECF-family RNA polymerase sigma factor sce8486 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457132 Common - transcriptional regulator, AraC family sce8847 66 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162453079 Common mazG hypothetical protein sce4803 158 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 162456796 Nonpathogen - putative secreted protein sce8513 1 None None None 162453986 Nonpathogen - hypothetical protein sce5710 1 None None None 162454836 Common sdhA1 Succinate dehydrogenase sce6554 223 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 162451676 Nonpathogen - hypothetical protein sce3404 6 None None None 162457066 Common - DNA polymerase lambda sce8781 69 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 162454526 Common lysC2 Aspartate kinase sce6246 232 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 162448837 Common - probable uvrD/Rep helicase family protein sce0567 52 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 162450402 Common - hypothetical protein sce2130 34 COG2425 COG2425, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162448668 Common lgt1 prolipoprotein diacylglyceryl transferase sce0398 28 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 162456534 Common - ECF-family RNA polymerase sigma factor sce8251 52 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451442 Nonpathogen - hypothetical protein sce3170 1 None None None 162454064 Common - hypothetical protein sce5788 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162448319 Nonpathogen - hypothetical protein sce0050 1 None None None 162449685 Nonpathogen - hypothetical protein sce1414 1 None None None 162449794 Common - Glycogen debranching enzyme (Glycogen debrancher) sce1523 49 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 162457419 Common - putative secreted protein sce9133 4 COG5180 PBP1, Protein interacting with poly(A)-binding protein RNA processing and modification 162453495 Nonpathogen - hypothetical protein sce5219 1 COG5373 COG5373, Predicted membrane protein Function unknown 162452775 Common - hypothetical protein sce4499 5 None None None 162448775 Common - hypothetical protein sce0505 28 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162452446 Common - transcriptional regulator, ArsR family sce4170 113 COG0640 ArsR, Predicted transcriptional regulators Transcription 162454206 Nonpathogen - hypothetical protein sce5929 3 None None None 162449141 Common - hypothetical protein sce0871 10 None None None 162451334 Nonpathogen - hypothetical protein sce3062 1 None None None 162452118 Common rel GTP diphosphokinase sce3845 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 162453481 Nonpathogen - hypothetical protein sce5205 1 None None None 162453715 Nonpathogen - hypothetical protein sce5439 1 None None None 162450836 Nonpathogen - hypothetical protein sce2564 1 None None None 162453005 Nonpathogen - hypothetical protein sce4729 10 None None None 162451882 Common rsbT1 positive regulator of sigma-B activity (switch protein/serine-threonine kinase) sce3609 11 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 162453219 Common cobT1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase sce4943 127 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 162448596 Common subI periplasmic sulfate binding protein sce0326 92 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 162453527 Nonpathogen - hypothetical protein sce5251 4 COG5649 COG5649, Uncharacterized conserved protein Function unknown 162452914 Nonpathogen - putative membrane protein (CBS domain) sce4638 6 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 162453697 Common - hypothetical protein-signal peptide and transmembrane prediction sce5421 7 None None None 162451440 Nonpathogen - hypothetical protein sce3167 1 None None None 162453217 Common - hypothetical protein sce4941 25 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 162448587 Common - hypothetical protein sce0317 8 None None None 162453267 Common - FHA domain protein sce4991 7 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 162448621 Common - 4-alpha-glucanotransferase homolog sce0351 103 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 162449750 Common parA1 chromosome partitioning protein sce1479 225 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162450305 Common - hypothetical protein sce2033 65 COG1691 COG1691, NCAIR mutase (PurE)-related proteins General function prediction only 162456130 Common ppsA3 Pyruvate, water dikinase sce7847 142 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162456781 Common - hypothetical protein sce8498 34 COG5483 COG5483, Uncharacterized conserved protein Function unknown 162448376 Common - hypothetical protein sce0106 22 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162448570 Common - hypothetical protein sce0300 23 None None None 162452298 Common - putative cobalamin binding protein sce4024 43 COG5012 COG5012, Predicted cobalamin binding protein General function prediction only 162452301 Common cga1 Glucan 1,4-alpha-glucosidase sce4027 26 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 162453401 Nonpathogen - hypothetical protein sce5125 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162454912 Common - putative cytochrome P450 sce6630 25 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162456346 Common - hypothetical protein sce8063 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 162450000 Common - hypothetical protein sce1729 18 COG2105 COG2105, Uncharacterized conserved protein Function unknown 162456234 Common rplE 50S ribosomal protein L5 sce7951 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 162449843 Nonpathogen - hypothetical protein sce1572 1 COG3793 TerB, Tellurite resistance protein Inorganic ion transport and metabolism 162454190 Common spoU SpoU rRNA methylase family protein sce5913 86 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 162453741 Nonpathogen - hypothetical protein sce5465 1 None None None 162453367 Common amyA Alpha-amylase sce5091 28 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 162453603 Nonpathogen - hypothetical protein sce5327 1 None None None 162453029 Common - hypothetical protein sce4753 5 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 162448609 Common - hypothetical protein sce0339 8 None None None 162449469 Nonpathogen - hypothetical protein sce1199 2 None None None 162452018 Common - sugar phosphate nucleotidyltransferase sce3745 164 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 162451022 Common - hypothetical protein sce2750 21 COG1403 McrA, Restriction endonuclease Defense mechanisms 162454244 Nonpathogen - hypothetical protein sce5967 1 None None None 162448789 Nonpathogen - putative secreted protein sce0519 6 None None None 162449546 Common - Protein kinase sce1275 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451661 Nonpathogen - hypothetical protein sce3389 1 None None None 162454024 Common trxC2 thioredoxin sce5748 235 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162448829 Nonpathogen - hypothetical protein sce0559 1 None None None 162449576 Common - Protein kinase sce1305 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451196 Nonpathogen - hypothetical protein sce2924 1 None None None 162452253 Common - hypothetical protein sce3980 21 None None None 162452888 Common - hypothetical protein sce4612 7 None None None 162450044 Common spoVR stage V sporulation protein R sce1773 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 162449314 Common pgm1 Phosphoglycerate mutase sce1044 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 162451658 Common - Protein kinase sce3386 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451278 Nonpathogen - hypothetical protein sce3006 1 None None None 162457384 Nonpathogen - hypothetical protein sce9099 2 None None None 162456279 Common plsB hypothetical protein sce7996 46 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 162453051 Nonpathogen - hypothetical protein sce4775 1 COG0795 COG0795, Predicted permeases General function prediction only 162449694 Common - transcriptional regulator, LysR family sce1423 191 COG0583 LysR, Transcriptional regulator Transcription 162454439 Common - histone deacetylase family protein sce6159 157 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 162449383 Common - hypothetical protein sce1113 61 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 162450854 Nonpathogen - hypothetical protein sce2582 1 None None None 162457501 Nonpathogen gspG general secretion pathway protein G sce9215 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 162450262 Common rrmJ hypothetical protein sce1990 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 162450535 Common - hypothetical protein sce2263 220 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162451140 Nonpathogen - putative secreted protein sce2868 1 None None None 162457328 Nonpathogen - hypothetical protein sce9043 1 None None None 162448780 Common ihfB integration host factor beta-subunit sce0510 204 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 162457062 Nonpathogen - hypothetical protein sce8777 1 None None None 162454261 Nonpathogen - hypothetical protein sce5985 1 None None None 162449174 Nonpathogen - hypothetical protein sce0904 3 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 162454972 Common - hypothetical protein sce6690 17 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 162454570 Common nodD Nodulation protein D 1 sce6290 34 None None None 162454757 Nonpathogen - hypothetical protein sce6475 6 None None None 162455441 Nonpathogen - hypothetical protein sce7160 3 None None None 162455682 Nonpathogen - putative DNA binding protein sce7400 1 None None None 162457291 Common add putative Adenosine deaminase sce9006 112 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 162449487 Common oar1 Oar protein sce1217 27 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162453551 Nonpathogen - hypothetical protein sce5275 1 None None None 162453848 Common - putative integral membrane transport protein sce5572 29 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 162456939 Nonpathogen - hypothetical protein sce8656 1 None None None 162454685 Nonpathogen - hypothetical protein sce6405 2 COG4776 Rnb, Exoribonuclease II Transcription 162448393 Common - hypothetical protein sce0123 139 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162456399 Common xthA exodeoxyribonuclease III sce8116 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 162449643 Common - hypothetical protein sce1372 17 None None None 162455139 Common ligB DNA ligase sce6857 107 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 162456193 Common - putative esterase sce7910 3 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 162448310 Nonpathogen - hypothetical protein sce0041 1 COG0457 NrfG, FOG: TPR repeat General function prediction only 162453146 Common - NDP-sugar oxidoreductase sce4870 190 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162456124 Common - spore coat protein H sce7841 17 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 162453869 Common - DUF323 domain conserved hypothetical protein sce5593 79 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162448516 Common cbiO cobalt transport system, ATP-binding protein CbiO sce0246 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 162450223 Nonpathogen - hypothetical protein sce1951 2 None None None 162449128 Common - RNA polymerase sigma factor sce0858 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162448465 Common - two-component sensor histidine kinase sce0195 221 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 162451492 Common xynB1 Endo-1,4-beta-glucanase sce3220 22 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 162449781 Common - putative transposase sce1510 21 None None None 162456068 Common - putative membrane protein/putative transporter sce7786 103 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 162456254 Common fmt2 hypothetical protein sce7971 213 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 162456930 Common - Sigma-54 dependent transcriptional regulator sce8647 171 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162454104 Common - Monooxygenase family protein sce5828 18 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 162451671 Nonpathogen - Putative O-Glycosyl hydrolase sce3399 1 COG5520 COG5520, O-Glycosyl hydrolase Cell envelope biogenesis, outer membrane 162452177 Nonpathogen - putative secreted protein sce3904 1 None None None 162453677 Nonpathogen - hypothetical protein sce5401 1 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 162453085 Common - hypothetical protein sce4809 15 None None None 162454898 Common - transposase sce6616 55 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162453023 Common ung uracil-DNA glycosylase sce4747 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 162457267 Common - transcriptional regulator, MarR family sce8982 10 COG1846 MarR, Transcriptional regulators Transcription 162456997 Common - two-component hybrid sensor histidine kinase/response regulator sce8713 220 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162456387 Common - transcriptional regulator, TetR family sce8104 34 COG1309 AcrR, Transcriptional regulator Transcription 162448965 Common - ECF-family RNA polymerase sigma factor sce0695 145 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450349 Nonpathogen - Probable serine protease sce2077 1 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 162451429 Common - molybdopterin-containing oxidoreductase catalytic subunit sce3157 185 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 162457038 Common - hypothetical protein sce8753 42 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162451837 Common - putative secreted protein sce3564 13 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451344 Nonpathogen - hypothetical protein sce3072 1 None None None 162456838 Common - Protein kinase sce8555 133 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450547 Common qor1 NADPH:quinone reductase sce2275 184 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162450752 Common - SAM-dependent methyltransferases sce2480 34 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162453137 Common - hypothetical protein sce4861 11 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 162449143 Common wza1 outer membrane polysaccharide exporter sce0873 119 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 162453798 Common - hypothetical protein sce5522 114 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162454062 Common accD hypothetical protein sce5786 217 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 162454780 Common - hypothetical protein sce6498 30 None None None 162452014 Common rsbX2 Phosphoserine phosphatase rsbX sce3741 24 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162453681 Nonpathogen - hypothetical protein sce5405 1 None None None 162448500 Common - WD-repeat protein sce0230 9 None None None 162454488 Common fabG11 putative 3-oxoacyl-[acyl-carrier-protein] reductase sce6208 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162456845 Common - putative NADPH quinone oxidoreductase sce8562 169 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162457583 Common - Putative zinc-binding dehydrogenase sce9297 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162454736 Common - hypothetical protein sce6454 19 None None None 162456286 Nonpathogen - hypothetical protein sce8003 1 None None None 162454222 Common - 533aa long hypothetical protein sce5945 5 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162449323 Nonpathogen - hypothetical protein sce1053 1 None None None 162455946 Nonpathogen - putative Heavy metal transport/detoxification protein sce7664 2 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 162455859 Common - putative integral membrane protein sce7577 105 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162451734 Common oppF oligopeptide ABC transporter ATP-binding protein sce3461 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 162449191 Common - Protein kinase sce0921 158 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454053 Common - putative lyase sce5777 9 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 162455345 Nonpathogen - hypothetical protein sce7063 1 None None None 162449159 Nonpathogen - glycosyltransferase sce0889 2 None None None 162455854 Common - DNA polymerase III, epsilon subunit sce7572 193 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 162453491 Common - putative transposase sce5215 23 None None None 162456291 Common - Protein kinase sce8008 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454120 Common - hypothetical protein sce5844 27 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162452360 Common - hypothetical protein sce4084 63 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162451412 Common cheR5 Chemotaxis protein methyltransferase sce3140 149 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162452689 Common - ABC transporter, permease protein sce4413 109 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 162454711 Common - putative SAM-dependent methyltransferase sce6429 128 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162455458 Common - hypothetical protein sce7176 22 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 162451107 Nonpathogen - hypothetical protein sce2835 2 None None None 162450272 Common - translation initiation inhibitor sce2000 154 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 162450826 Common - two-component system sensor protein sce2554 181 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450696 Common - two-component response regulator sce2424 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162451902 Nonpathogen - hypothetical protein sce3629 1 None None None 162450759 Nonpathogen - Type II secretory pathway pseudopilin sce2487 1 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 162450129 Nonpathogen - hypothetical protein sce1858 1 None None None 162450484 Common - Putative topoisomerase sce2212 8 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162455424 Common - hypothetical protein sce7143 5 None None None 162449361 Nonpathogen - hypothetical protein sce1091 1 None None None 162457181 Common hisZ ATP phosphoribosyltransferase regulatory subunit sce8896 162 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162457644 Common - DNA methyltransferase sce9358 113 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 162455840 Nonpathogen - hypothetical protein sce7558 1 None None None 162456925 Nonpathogen - putative ABC transporter integral membrane protein sce8642 1 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162448556 Nonpathogen - hypothetical protein sce0286 1 None None None 162450345 Common - hypothetical protein sce2073 106 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 162455483 Nonpathogen - hypothetical protein sce7201 1 None None None 162451909 Nonpathogen - hypothetical protein sce3636 16 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162451453 Common - probable Hydroxymethylglutaryl-CoA synthase sce3181 27 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 162454783 Common - hypothetical protein sce6501 180 COG0714 COG0714, MoxR-like ATPases General function prediction only 162455135 Nonpathogen - hypothetical protein sce6853 1 None None None 162455809 Common - BNR repeat domain protein sce7527 35 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162453950 Common - hypothetical protein sce5674 79 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 162456597 Common - putative periplasmic substrate-binding protein sce8314 101 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 162453776 Common - hypothetical protein sce5500 15 None None None 162449305 Nonpathogen - hypothetical protein sce1035 1 None None None 162457506 Nonpathogen - hypothetical protein sce9220 1 None None None 162456694 Nonpathogen - hypothetical protein sce8411 1 None None None 162451636 Common - hypothetical protein sce3364 30 COG3236 COG3236, Uncharacterized protein conserved in bacteria Function unknown 162452233 Nonpathogen - hypothetical protein sce3960 5 COG3744 COG3744, Uncharacterized protein conserved in bacteria Function unknown 162451693 Common - Foldase protein prsA 4 precursor . sce3421 99 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162451436 Common - hypothetical protein sce3164 10 None None None 162450237 Common - hypothetical protein sce1965 12 None None None 162454923 Common yfeW putative beta-lactamase precursor sce6641 154 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162450084 Common purE Phosphoribosylaminoimidazole carboxylase sce1813 231 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 162452591 Common - biopolymer transport protein, putative sce4315 46 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 162454908 Common - hypothetical protein sce6626 9 None None None 162452713 Common rimM 16S rRNA processing protein sce4437 158 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 162457540 Common - putative secreted protein sce9254 56 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 162456262 Common atpB H(+)-transporting two-sector ATPase sce7979 176 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 162451159 Nonpathogen - hypothetical protein sce2887 1 None None None 162452998 Common - anti-anti sigma factor protein sce4722 103 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454949 Nonpathogen - hypothetical protein sce6667 1 None None None 162454337 Common - hypothetical protein sce6060 6 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162455834 Nonpathogen - hypothetical protein sce7552 2 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162456940 Common - hypothetical protein sce8657 102 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 162453348 Nonpathogen tonB2 putative TonB protein sce5072 2 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 162451585 Nonpathogen - putative secreted protein sce3313 1 None None None 162455892 Common nuoM2 NADH dehydrogenase I chain M sce7610 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 162454800 Nonpathogen - hypothetical protein sce6518 1 None None None 162452879 Common - putative secreted protein sce4603 7 None None None 162457011 Common - pseudogene sce_pseudo_15 86 None None None 162456983 Nonpathogen - hypothetical protein sce8699 1 None None None 162454089 Nonpathogen - high-affinity nickel-transport family protein sce5813 8 COG3376 HoxN, High-affinity nickel permease Inorganic ion transport and metabolism 162456957 Nonpathogen - hypothetical protein sce8674 1 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 162457465 Nonpathogen - hypothetical protein sce9179 1 None None None 162455270 Nonpathogen - permease of the major facilitator superfamily sce6988 4 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162457521 Nonpathogen - hypothetical protein sce9235 1 None None None 162448973 Nonpathogen - hypothetical protein sce0703 7 None None None 162451099 Nonpathogen - putative secreted protein sce2827 1 None None None 162449247 Nonpathogen - hypothetical protein sce0977 3 None None None 162455596 Common - hypothetical protein sce7314 15 COG3382 COG3382, Uncharacterized conserved protein Function unknown 162452846 Common ppsA2 Phosphoenolpyruvate synthase sce4570 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162457372 Common - hypothetical protein sce9087 14 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162453341 Common - Sigma-54 dependent transcriptional regulator sce5065 165 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162451954 Common - ECF-family RNA polymerase sigma factor sce3681 7 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453542 Common phhA Phenylalanine 4-monooxygenase sce5266 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 162449022 Common - putative glycolate oxidase sce0752 197 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162450140 Common - hypothetical protein sce1869 35 COG2259 COG2259, Predicted membrane protein Function unknown 162457217 Common - Glucose-resistance amylase regulator sce8932 128 COG1609 PurR, Transcriptional regulators Transcription 162452182 Common - hypothetical protein sce3909 12 None None None 162452832 Nonpathogen - hypothetical protein sce4556 1 None None None 162456671 Nonpathogen - hypothetical protein sce8388 1 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162451874 Nonpathogen - hypothetical protein sce3601 1 None None None 162454634 Common - two-component system histidine kinase sce6354 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450960 Nonpathogen - putative methyltransferase sce2688 6 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162449354 Common - Protein kinase sce1084 122 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453281 Common fmt1 hypothetical protein sce5005 216 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 162453913 Nonpathogen - TPR repeat hypothetical protein sce5637 2 None None None 162452728 Common gyrB DNA gyrase subunit B sce4452 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 162448747 Nonpathogen - hypothetical protein sce0477 1 None None None 162454435 Common - exported transglycosylase sce6155 159 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 162453926 Common - hypothetical protein sce5650 27 COG5579 COG5579, Uncharacterized conserved protein Function unknown 162455902 Nonpathogen - hypothetical protein sce7620 1 None None None 162454358 Nonpathogen - Putative secreted protein sce6081 1 None None None 162454608 Common - hypothetical protein sce6327 28 COG3819 COG3819, Predicted membrane protein Function unknown 162449055 Nonpathogen - PE-PGRS family protein sce0785 3 COG4907 COG4907, Predicted membrane protein Function unknown 162455760 Common - small membrane protein sce7478 4 None None None 162452179 Common yprA Nucleotidyltransferase sce3906 138 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 162453011 Nonpathogen - hypothetical protein sce4735 3 None None None 162448603 Nonpathogen - hypothetical protein sce0333 3 None None None 162451797 Nonpathogen - hypothetical protein sce3524 2 None None None 162449959 Nonpathogen - hypothetical protein sce1688 1 None None None 162450490 Common - hypothetical protein sce2218 9 COG4907 COG4907, Predicted membrane protein Function unknown 162457392 Nonpathogen - hypothetical protein sce9107 1 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 162454097 Nonpathogen - putative secreted protein sce5821 2 None None None 162457144 Nonpathogen - hypothetical protein sce8859 1 None None None 162448664 Nonpathogen - hypothetical protein sce0394 2 None None None 162448841 Common - permease of the major facilitator superfamily sce0571 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162452339 Common - pseudogene sce_pseudo_06 11 COG3378 COG3378, Predicted ATPase General function prediction only 162457549 Common - Sugar ABC transporter, ATP-binding protein sce9263 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 162450353 Common - hypothetical protein sce2081 15 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 162450784 Common - hypothetical protein sce2512 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162449080 Nonpathogen - hypothetical protein sce0810 1 None None None 162451081 Common - hypothetical protein sce2809 6 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 162454852 Common - predicted subtilisin like protease sce6570 101 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162456430 Nonpathogen - hypothetical protein sce8147 1 None None None 162456517 Common - hypothetical protein sce8234 35 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 162456148 Common - hypothetical protein sce7865 76 COG3189 COG3189, Uncharacterized conserved protein Function unknown 162455913 Common murC2 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase sce7631 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 162451793 Nonpathogen - hypothetical protein sce3520 1 None None None 162454285 Common xylF xylose binding protein transport system sce6008 96 COG4213 XylF, ABC-type xylose transport system, periplasmic component Carbohydrate transport and metabolism 162455786 Nonpathogen - hypothetical protein sce7504 1 None None None 162455019 Nonpathogen - hypothetical protein sce6737 3 None None None 162452401 Nonpathogen - hypothetical protein sce4125 1 None None None 162448304 Nonpathogen - hypothetical protein sce0035 1 None None None 162449611 Common - RNA polymerase ECF-type sigma factor sce1340 145 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455769 Common ftsI3 pencillin-binding transpeptidase with putative regulatory N-terminal domain sce7487 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 162452537 Common - hypothetical protein sce4261 76 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 162455832 Nonpathogen - putative secreted protein sce7550 1 None None None 162456481 Common - hypothetical protein sce8198 6 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 162456714 Common sodC superoxide dismutase, secreted sce8431 87 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 162453069 Common - Sigma-54 dependent transcriptional regulator sce4793 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162454509 Nonpathogen - Putative secreted protein sce6229 3 None None None 162455770 Common - hypothetical protein sce7488 29 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162453933 Nonpathogen - hypothetical protein sce5657 1 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162452656 Nonpathogen - hypothetical protein sce4380 1 None None None 162453906 Common - hypothetical protein sce5630 34 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 162456017 Nonpathogen - hypothetical protein sce7735 1 None None None 162450289 Nonpathogen - hypothetical protein sce2017 1 None None None 162450920 Common - PE-PGRS family protein sce2648 35 COG5651 COG5651, PPE-repeat proteins Cell motility and secretion 162449339 Common map1 hypothetical protein sce1069 246 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 162456154 Common - hypothetical protein sce7871 33 COG4938 COG4938, Uncharacterized conserved protein Function unknown 162457176 Nonpathogen - hypothetical protein sce8891 1 None None None 162451815 Common - transcriptional regulator, LysR family sce3542 179 COG0583 LysR, Transcriptional regulator Transcription 162456009 Nonpathogen - hypothetical protein sce7727 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457100 Nonpathogen - hypothetical protein sce8815 1 None None None 162454841 Nonpathogen - hypothetical protein sce6559 3 COG3534 AbfA, Alpha-L-arabinofuranosidase Carbohydrate transport and metabolism 162455278 Nonpathogen - putative secreted protein sce6996 1 None None None 162453332 Common - hypothetical protein sce5056 26 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162451161 Common kamD Beta-lysine 5,6-aminomutase, alpha subunit sce2889 17 None None None 162450793 Common - hypothetical protein sce2521 174 COG0759 COG0759, Uncharacterized conserved protein Function unknown 162453462 Common - putative alkaline protease sce5186 83 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162454977 Common cadA FAD-binding monooxygenase, PheA/TfdB family sce6695 85 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162453263 Common - hypothetical protein sce4987 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 162452947 Common - Rhs element Vgr protein sce4671 62 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162453670 Common gldA Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) sce5394 82 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 162451490 Common pilR1 Nitrogen regulation protein NR(I). sce3218 171 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162448421 Nonpathogen - hypothetical protein sce0151 1 None None None 162450674 Common moeA1 probable molybdopterin biosynthesis protein sce2402 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 162450967 Common - anti-anti sigma factor protein sce2695 84 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162449026 Nonpathogen - hypothetical protein sce0756 2 None None None 162449822 Common masA enolase-phosphatase sce1551 31 COG4229 COG4229, Predicted enolase-phosphatase Energy production and conversion 162456684 Common - hypothetical protein sce8401 3 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 162457389 Nonpathogen - hypothetical protein sce9104 2 None None None 162455336 Common glpT Glycerol-3-phosphate transporter sce7054 43 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 162449975 Common - putative transcription factor sce1704 85 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 162448414 Nonpathogen - hypothetical protein sce0144 7 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 162450832 Common - sigma-54 dependent DNA-binding response regulator sce2560 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454771 Common - exodeoxyribonuclease VII small subunit sce6489 97 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 162450445 Nonpathogen - hypothetical protein sce2173 1 COG0457 NrfG, FOG: TPR repeat General function prediction only 162453226 Common - hypothetical protein sce4950 5 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162456508 Common - putative SAM-dependent methyltransferase sce8225 9 COG0500 SmtA, SAM-dependent methyltransferases Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162453446 Common - WD-repeat protein sce5170 65 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162455779 Common - hypothetical protein sce7497 143 COG1733 COG1733, Predicted transcriptional regulators Transcription 162456559 Common - ADP-ribose pyrophosphatase sce8276 7 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 162454315 Nonpathogen - putative membrane/secreted protein sce6038 1 None None None 162457275 Common - putative two-component sensor kinase sce8990 221 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 162454869 Common glyA Glycine hydroxymethyltransferase sce6587 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 162449677 Nonpathogen - hypothetical protein sce1406 1 None None None 162451160 Nonpathogen fsxA conserved hypothetical membrane protein, FxsA-like sce2888 1 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 162452907 Common - Extracellular elastinolytic metalloproteinase precursor sce4631 24 None None None 162453905 Common - putative NADH-dependent flavin oxidoreductase sce5629 117 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 162450800 Common acpM hypothetical protein sce2528 3 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162451482 Common - Hypothetical WD-repeat protein all2124. sce3210 20 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162453932 Nonpathogen - putative secreted protein sce5656 2 None None None 162452049 Nonpathogen - hypothetical protein sce3776 7 None None None 162455180 Nonpathogen - hypothetical protein sce6898 1 None None None 162457314 Nonpathogen - hypothetical protein sce9029 1 None None None 162455791 Nonpathogen - hypothetical protein sce7509 1 None None None 162456949 Common - probable dehydrogenase sce8666 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162448678 Common rplJ 50S ribosomal protein L10 sce0408 206 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 162449804 Nonpathogen - put. membrane protein sce1533 1 None None None 162454511 Nonpathogen - putative secreted protein sce6231 1 None None None 162448526 Common - putative translation initiation inhibitor sce0256 193 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 162451247 Nonpathogen - hypothetical protein sce2975 3 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 162453012 Nonpathogen - hypothetical protein sce4736 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451234 Common - putative oxidoreductase sce2962 180 COG3347 COG3347, Uncharacterized conserved protein Function unknown 162450732 Nonpathogen - hypothetical protein sce2460 1 None None None 162451923 Common - Protein kinase sce3650 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457380 Nonpathogen - putative transposase sce9095 7 None None None 162448971 Nonpathogen - hypothetical protein sce0701 1 None None None 162450147 Common - RNA-binding protein sce1876 66 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 162451166 Common - Putetive secreted protein sce2894 2 COG5373 COG5373, Predicted membrane protein Function unknown 162451990 Nonpathogen - hypothetical protein sce3716 1 None None None 162452573 Common bglA2 Beta-glucosidase sce4297 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 162456951 Common - predicted subtilisin like protease sce8668 125 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162450723 Common - hypothetical protein sce2451 7 None None None 162450849 Common - radical activating enzyme sce2577 149 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 162457191 Common - hypothetical protein sce8906 91 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162449473 Common - hypothetical protein sce1203 59 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162452321 Common - putative secreted protein sce4047 3 None None None 162455021 Common - putative lipase sce6739 29 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162453967 Common - Protein kinase sce5691 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455198 Common - TPR domain protein sce6916 80 COG3914 Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family Posttranslational modification, protein turnover, chaperones 162448845 Nonpathogen - hypothetical protein sce0575 1 None None None 162455993 Common - hypothetical protein sce7711 42 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 162450481 Nonpathogen - Transposon Ty1 protein B. sce2209 1 COG5373 COG5373, Predicted membrane protein Function unknown 162448471 Common - putative trypsin precursor sce0201 24 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 162449263 Common - hypothetical protein-transmembrane prediction sce0993 7 None None None 162454445 Common - hypothetical protein sce6165 11 COG1238 COG1238, Predicted membrane protein Function unknown 162457083 Common - sensor histidine kinase sce8798 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162455119 Nonpathogen - hypothetical protein sce6837 6 None None None 162456167 Common - hypothetical DNA-binding ferritin-like protein,Dps family sce7884 134 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 162449113 Common rplD hypothetical protein sce0843 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 162454248 Common - hypothetical protein sce5971 24 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162449535 Common - hypothetical protein sce1265 24 None None None 162455566 Nonpathogen - hypothetical protein sce7283 1 None None None 162451020 Nonpathogen - hypothetical protein sce2748 1 None None None 162453385 Common - Protein kinase sce5109 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448929 Common natA sodium ABC transporter ATP-binding protein sce0659 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162449296 Common - Protein kinase sce1026 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451401 Common mutS1 DNA mismatch repair protein sce3129 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 162450182 Nonpathogen - hypothetical protein sce1911 1 None None None 162451301 Common - Aminotransferase sce3029 227 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 162452048 Common - hypothetical protein sce3775 25 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 162449434 Nonpathogen - hypothetical protein sce1164 1 None None None 162453297 Common - putative Hydrolase sce5021 41 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162452103 Nonpathogen - hypothetical protein sce3830 1 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 162457455 Nonpathogen - hypothetical protein sce9169 1 None None None 162455405 Common - hypothetical protein sce7123 25 COG3482 COG3482, Uncharacterized conserved protein Function unknown 162456428 Nonpathogen - hypothetical protein sce8145 1 None None None 162449627 Common kdpE two component system transcriptional regulatory protein sce1356 205 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162448810 Common - hypothetical protein sce0540 47 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162453430 Common kdgA2 KDPG and KHG aldolase sce5154 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 162449517 Common - hypothetical protein sce1247 7 None None None 162453439 Common - putative acetyltransferase sce5163 29 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 162453571 Common mutS2 DNA mismatch repair protein sce5295 198 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 162448564 Common bhuU putative hemin permease sce0294 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 162449241 Nonpathogen - hypothetical protein sce0971 1 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 162450071 Common - sensory box hybrid histidine kinase sce1800 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162448906 Nonpathogen - hypothetical protein sce0636 1 None None None 162453365 Nonpathogen - putative Protein tyrosine/serine phosphatase sce5089 16 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 162450115 Common - hypothetical protein sce1844 11 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162448736 Nonpathogen - putative secreted protein sce0466 1 None None None 162455591 Common - hypothetical protein sce7309 19 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 162455498 Common ruvB holliday junction DNA helicase sce7216 220 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 162448925 Common - Protein kinase sce0655 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455321 Common - putative 5'-nucleotidase family protein sce7039 139 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 162454175 Common - pseudogene sce_pseudo_07 29 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457076 Nonpathogen - putative secreted protein sce8791 1 None None None 162450078 Common - hypothetical protein sce1807 50 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 162455222 Common - put. Sugar kinase sce6940 90 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 162449931 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase sce1660 209 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 162456661 Common ribD3 Riboflavin biosynthesis protein ribD sce8378 195 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 162453581 Common - hypothetical protein sce5305 8 None None None 162451893 Common paaZ aldehyde dehydrogenase sce3620 208 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162453327 Common - transposase, IS4 family sce5051 27 None None None 162452445 Common - hypothetical protein sce4169 9 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162457153 Nonpathogen - hypothetical protein sce8868 1 None None None 162452811 Common - hypothetical protein sce4535 11 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 162453245 Common - ECF-family RNA polymerase sigma factor sce4969 113 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448598 Common cysW sulfate transport system permease protein sce0328 208 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 162455479 Common - hypothetical protein sce7197 36 None None None 162451260 Common - outer membrane efflux protein sce2988 53 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162452693 Nonpathogen - lectin-like glycine/serine-rich protein sce4417 4 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162453650 Common gutB hypothetical protein sce5374 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162455755 Common - hypothetical protein sce7473 5 COG1474 CDC6, Cdc6-related protein, AAA superfamily ATPase DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones 162455000 Common - efflux transporter, RND family, MFP subunit sce6718 139 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162451424 Nonpathogen - hypothetical protein sce3152 1 None None None 162449792 Common - hypothetical protein sce1521 64 COG3247 HdeD, Uncharacterized conserved protein Function unknown 162453208 Common - hypothetical protein sce4932 99 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162457149 Nonpathogen - hypothetical protein sce8864 1 None None None 162448566 Common - FHA domain protein sce0296 24 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162451469 Common - conserved carbohydrate-binding protein, Rhs family sce3197 55 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162449813 Common - putative protease inhibitor sce1542 10 None None None 162454178 Nonpathogen - putative Methionine synthase. sce5901 1 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 162454209 Nonpathogen - hypothetical protein sce5932 5 None None None 162450292 Common - hypothetical protein sce2020 2 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 162455445 Common - hypothetical protein sce7163 4 None None None 162457340 Common - tetrapyrrole methylase family protein sce9055 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 162450168 Common - hypothetical protein sce1897 7 None None None 162451742 Common - Protein kinase sce3469 131 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448419 Common - hypothetical protein sce0149 4 None None None 162457634 Nonpathogen - hypothetical protein sce9348 1 None None None 162456705 Common - hypothetical protein sce8422 19 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162451473 Nonpathogen - hypothetical protein sce3201 1 None None None 162456081 Nonpathogen - hypothetical protein sce7799 1 None None None 162455572 Nonpathogen - hypothetical protein sce7290 1 None None None 162456090 Common - hypothetical protein sce7808 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450857 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase sce2585 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 162456056 Nonpathogen - Putative HTH-type transcriptional regulator ycfQ. sce7774 1 None None None 162454326 Nonpathogen - hypothetical protein sce6049 1 None None None 162452342 Nonpathogen - hypothetical protein sce4066 1 None None None 162456180 Common - ECF-family RNA polymerase sigma factor sce7897 172 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451687 Common topB DNA topoisomerase III sce3415 240 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 162454706 Common - Cytochrome P450 CYP110J1 sce6424 87 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162456460 Common - hypothetical protein sce8177 4 COG0546 Gph, Predicted phosphatases General function prediction only 162451119 Common - response regulator/GGDEF domain protein sce2847 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162457430 Common hisG hypothetical protein sce9144 212 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 162449226 Common - hypothetical protein sce0956 22 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162453793 Nonpathogen - hypothetical protein sce5517 1 None None None 162455070 Common - hypothetical protein sce6788 9 None None None 162451754 Nonpathogen - hypothetical protein sce3481 2 COG4944 COG4944, Uncharacterized protein conserved in bacteria Function unknown 162453746 Common - Protein kinase sce5470 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448696 Common - rhodanese-like domain-containing protein sce0426 68 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 162451704 Common plsC3 1-acylglycerol-3-phosphate O-acyltransferase sce3432 192 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162452311 Common nrtA nitrate/nitrite ABC transporter substrate-binding protein sce4037 85 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162450189 Common - hypothetical protein sce1917 15 COG3831 COG3831, Uncharacterized conserved protein Function unknown 162448280 Common rluD1 ribosomal large subunit pseudouridine synthase D sce0011 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 162452108 Nonpathogen - hypothetical protein sce3835 1 None None None 162453188 Common amtR transcriptional regulator, tetR family sce4912 52 COG1309 AcrR, Transcriptional regulator Transcription 162451576 Common - put. Xylosidase/arabinosidase sce3304 39 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162453052 Common fkpA Peptidylprolyl isomerase sce4776 145 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 162455886 Nonpathogen - putative secreted protein sce7604 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 162457253 Common - Predicted nucleotide-diphosphate-sugar epimerase sce8968 101 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162453871 Nonpathogen - hypothetical protein sce5595 3 None None None 162455502 Nonpathogen - hypothetical protein sce7220 1 None None None 162452989 Nonpathogen - hypothetical protein sce4713 1 None None None 162450012 Common dnaE1 DNA polymerase III, alpha subunit sce1741 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 162454820 Nonpathogen - hypothetical protein sce6538 2 None None None 162457284 Common - hypothetical protein sce8999 145 COG2144 COG2144, Selenophosphate synthetase-related proteins General function prediction only 162451025 Common - Protein kinase sce2753 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449108 Common rpsL 30S ribosomal protein S12 sce0838 246 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 162450411 Common - hypothetical protein sce2139 66 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162452957 Nonpathogen - hypothetical protein sce4681 1 None None None 162449630 Nonpathogen - hypothetical protein sce1359 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450552 Common - Hypothetical WD-repeat protein alr2800. sce2280 36 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 162453103 Common - hypothetical protein sce4827 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454162 Common hisF Imidazoleglycerol phosphate synthase, cyclase subunit sce5886 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 162451385 Common - hypothetical protein sce3113 57 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162457335 Nonpathogen - hypothetical protein sce9050 1 None None None 162455125 Common - 23S rRNA-like protein sce6843 8 None None None 162449854 Nonpathogen - hypothetical protein sce1583 1 None None None 162451398 Common pp2c7 Phosphoprotein phosphatase sce3126 138 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162453391 Common topA DNA topoisomerase I sce5115 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 162448476 Common - two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') sce0206 224 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 162456542 Common - Penicillin amidase sce8259 74 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 162448930 Common - putative ABC transporter sodium permease sce0660 17 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 162450739 Nonpathogen - hypothetical protein sce2467 1 None None None 162450005 Common - putative DNA polymerase related protein sce1734 144 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 162454119 Nonpathogen - hypothetical protein sce5843 1 None None None 162456157 Nonpathogen - hypothetical protein sce7874 1 COG3378 COG3378, Predicted ATPase General function prediction only 162448448 Nonpathogen - hypothetical protein sce0178 3 None None None 162453973 Nonpathogen - putative secreted protein sce5697 3 None None None 162450131 Common cyc1 hypothetical protein sce1860 85 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162456397 Common - hypothetical protein sce8114 21 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162456053 Common - transcriptional regulator, MarR family sce7771 10 COG1846 MarR, Transcriptional regulators Transcription 162457240 Common - hypothetical protein sce8955 106 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 162456187 Nonpathogen - hypothetical protein sce7904 1 None None None 162454061 Common scoB 3-oxoacid CoA-transferase sce5785 106 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 162455730 Common - putative neutral zinc metallopeptidase. sce7448 86 COG2321 COG2321, Predicted metalloprotease General function prediction only 162457225 Nonpathogen - hypothetical protein sce8940 1 None None None 162453948 Nonpathogen - putative secreted protein sce5672 2 None None None 162456292 Nonpathogen - hypothetical protein sce8009 1 None None None 162453762 Common - hypothetical protein sce5486 50 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162456221 Common rpsK hypothetical protein sce7938 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 162450083 Nonpathogen - hypothetical protein sce1812 1 None None None 162450174 Nonpathogen - hypothetical protein sce1903 5 None None None 162451052 Common - GroES-like protein sce2780 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 162448796 Common nuoG NADH dehydrogenase (ubiquinone) sce0526 182 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 162449409 Nonpathogen - hypothetical protein sce1139 1 None None None 162451646 Common - hypothetical protein sce3374 10 None None None 162450069 Nonpathogen - putative secreted protein sce1798 3 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162448344 Nonpathogen - hypothetical protein sce0075 2 None None None 162453561 Common - Putative multidrug resistance protein precursor sce5285 139 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162449653 Common rimI1 hypothetical protein sce1382 96 COG2153 ElaA, Predicted acyltransferase General function prediction only 162450606 Common - hypothetical protein sce2334 10 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162451173 Nonpathogen - hypothetical glycine rich transmembrane protein sce2901 4 None None None 162451240 Nonpathogen - hypothetical protein sce2968 1 None None None 162456967 Common glpA hypothetical protein sce8683 164 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 162453274 Common - hypothetical protein sce4998 47 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 162457027 Common - hypothetical protein sce8742 7 None None None 162456116 Common - ECF-family RNA polymerase sigma factor sce7833 5 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448935 Common - hypothetical protein sce0665 162 COG1162 COG1162, Predicted GTPases General function prediction only 162449233 Nonpathogen - hypothetical protein sce0963 1 None None None 162456322 Common - peptidase, M48 family sce8039 194 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 162452935 Nonpathogen - hypothetical protein sce4659 1 None None None 162449582 Common - monooxygenase sce1311 72 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162456228 Nonpathogen rpmD 50S ribosomal protein L30 sce7945 1 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 162456827 Nonpathogen - PE_PGRS family protein sce8544 1 COG4907 COG4907, Predicted membrane protein Function unknown 162452172 Common tatB Sec-independent protein translocase TatB sce3899 19 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 162452622 Common - hypothetical protein sce4346 184 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 162449759 Nonpathogen - hypothetical protein sce1488 1 None None None 162453359 Common pdxH hypothetical protein sce5083 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 162448851 Common crtB Phytoene synthase sce0581 99 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 162449387 Common - transcriptional regulator, LysR family sce1117 100 COG0583 LysR, Transcriptional regulator Transcription 162453992 Common arsR3 transcriptional regulator, ArsR family sce5716 54 COG0640 ArsR, Predicted transcriptional regulators Transcription 162449659 Common - hypothetical protein sce1388 111 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 162452550 Nonpathogen pilA2 fimbiral protein pilA sce4274 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 162452031 Common - myrcene/ocimene synthase, putative sce3758 5 COG2952 COG2952, Uncharacterized protein conserved in bacteria Function unknown 162451093 Common - hypothetical protein sce2821 29 COG3871 COG3871, Uncharacterized stress protein (general stress protein 26) General function prediction only 162451362 Common - O-methyltransferase-related protein sce3090 19 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162455937 Nonpathogen - transcriptional regulator sce7655 1 COG1396 HipB, Predicted transcriptional regulators Transcription 162454016 Common - Predicted aminopeptidase sce5740 56 COG2234 Iap, Predicted aminopeptidases General function prediction only 162452200 Common - hypothetical protein sce3927 11 COG4026 COG4026, Uncharacterized protein containing TOPRIM domain, potential nuclease General function prediction only 162457444 Common potC1 spermidine/putrescine ABC transporter, permease protein sce9158 188 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 162448826 Nonpathogen - putative secreted protein sce0556 2 None None None 162449650 Common - hypothetical protein sce1379 34 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 162456045 Common - hypothetical protein sce7763 28 COG3506 COG3506, Uncharacterized conserved protein Function unknown 162456580 Nonpathogen - hypothetical protein sce8297 1 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 162451290 Common - hypothetical protein sce3018 186 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162449688 Nonpathogen - sensor histidine kinase sce1418 6 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162450303 Common - hypothetical protein sce2031 7 None None None 162451378 Common - hypothetical protein sce3106 7 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449598 Common - thioredoxin sce1327 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162453093 Nonpathogen - hypothetical protein sce4817 1 None None None 162454149 Common - lignin degradation protein sce5873 25 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162454870 Nonpathogen - hypothetical protein sce6588 1 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 162450036 Common - hypothetical protein sce1765 27 COG0622 COG0622, Predicted phosphoesterase General function prediction only 162454212 Common - thrombospondin-like alanine-rich exported protein sce5935 9 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162456822 Nonpathogen - hypothetical protein sce8539 1 None None None 162450108 Nonpathogen - hypothetical protein sce1837 4 None None None 162453834 Nonpathogen - hypothetical protein sce5558 1 None None None 162457598 Common - tonB family protein sce9312 11 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162455010 Common - hypothetical protein sce6728 3 None None None 162455057 Nonpathogen - hypothetical protein sce6775 10 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162449216 Nonpathogen - hypothetical protein sce0946 1 COG3748 COG3748, Predicted membrane protein Function unknown 162450438 Nonpathogen - hypothetical protein sce2166 1 None None None 162456021 Common - conserved hypothetical protein with a signal sequence sce7739 7 None None None 162456576 Common - hypothetical protein sce8293 23 COG3875 COG3875, Uncharacterized conserved protein Function unknown 162452625 Common kefX putative potassium-efflux system protein, Kef-family sce4349 3 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 162453691 Common - transcriptional regulator, AraC family sce5415 32 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162457160 Nonpathogen - hypothetical protein sce8875 1 None None None 162454402 Nonpathogen - hypothetical protein sce6123 1 None None None 162449016 Nonpathogen - hypothetical protein sce0746 1 None None None 162454958 Common - Hypothetical protein with NAD binding domain sce6676 10 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162456046 Common - transcriptional regulator, LysR family sce7764 136 COG0583 LysR, Transcriptional regulator Transcription 162455007 Common - hypothetical sulphur-carrier protein sce6725 18 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 162450545 Nonpathogen - hypothetical protein sce2274 1 None None None 162457169 Common - Sigma-54 dependent transcriptional regulator sce8884 185 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162449604 Common fabG1 3-oxoacyl-[acyl-carrier-protein] reductase sce1333 229 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162449950 Common recO DNA repair protein RecO (recombination protein O) sce1679 43 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 162454197 Common - 3-oxoacyl-(acyl-carrier-protein)-synthase II sce5920 202 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162451765 Common - Epoxide hydrolase sce3492 126 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162448726 Common - Integrase/recombinase sce0456 213 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162453879 Common maeB1 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) sce5603 189 COG0281 SfcA, Malic enzyme Energy production and conversion 162448543 Common - hypothetical protein sce0273 27 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 162450179 Common - transcriptional regulator, MerR family sce1908 102 COG0789 SoxR, Predicted transcriptional regulators Transcription 162451624 Nonpathogen - hypothetical protein sce3352 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449769 Nonpathogen - putative Endoglucanase A, secreted sce1498 6 None None None 162450957 Nonpathogen - hypothetical protein sce2685 3 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162456494 Common - Adenylattransferase sce8211 48 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 162449154 Nonpathogen - hypothetical protein sce0884 1 None None None 162450522 Nonpathogen - hypothetical protein sce2250 4 COG0392 COG0392, Predicted integral membrane protein Function unknown 162456273 Nonpathogen - hypothetical protein sce7990 1 None None None 162448852 Common - hypothetical protein sce0582 14 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 162452468 Common - anti-anti sigma factor protein sce4192 82 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162453732 Nonpathogen - hypothetical protein sce5456 1 None None None 162450090 Common - Hypothetical protein yfeS. sce1819 3 COG4884 COG4884, Uncharacterized protein conserved in bacteria Function unknown 162452899 Nonpathogen - hypothetical protein sce4623 2 None None None 162450195 Common fba1 Fructose-bisphosphate aldolase sce1923 171 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 162449920 Common - sigma-54 dependent DNA-binding response regulator sce1649 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162448958 Common - endonuclease/exonuclease/phosphatase family sce0688 52 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 162449411 Common - Short chain dehydrogenase sce1141 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162452845 Common - hypothetical protein sce4569 8 COG1945 COG1945, Uncharacterized conserved protein Function unknown 162457093 Common fecA probable TonB-dependent receptor sce8808 60 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162454520 Nonpathogen - hypothetical protein sce6240 11 None None None 162452271 Common - hypothetical protein sce3998 224 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 162454371 Nonpathogen - putative secreted protein sce6094 1 None None None 162448436 Common - ABC transporter permease protein sce0166 161 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162454424 Nonpathogen - hypothetical protein sce6144 1 None None None 162451707 Common - hypothetical protein sce3435 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 162451822 Nonpathogen - hypothetical protein sce3549 1 None None None 162453889 Common - hypothetical protein sce5613 40 None None None 162448288 Common msbA2 ABC transporter family carbohydrate exporter sce0019 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162454499 Nonpathogen - hypothetical protein sce6219 1 None None None 162449119 Nonpathogen - hypothetical protein sce0849 1 None None None 162455925 Nonpathogen - hypothetical protein sce7643 1 None None None 162457124 Common tam2 hypothetical protein sce8839 69 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 162455556 Nonpathogen - hypothetical protein sce7274 1 None None None 162450450 Nonpathogen - hypothetical protein sce2178 1 None None None 162449683 Nonpathogen - hypothetical protein sce1412 2 None None None 162449908 Common - GMC oxidoreductase sce1637 73 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 162453884 Nonpathogen - hypothetical protein sce5608 1 None None None 162453197 Common ssuB aliphatic sulfonate ABC transporter, nucleotide binding/ATPase protein sce4921 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162451523 Common - transcriptional regulator, LysR family sce3251 151 COG0583 LysR, Transcriptional regulator Transcription 162448912 Common ychJ Hypothetical UPF0225 protein ychJ. sce0642 79 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 162452866 Common - hypothetical protein sce4590 22 COG4907 COG4907, Predicted membrane protein Function unknown 162448834 Common ddlA1 D-alanine-D-alanine ligase sce0564 210 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 162450431 Nonpathogen - hypothetical protein sce2159 1 None None None 162452328 Common - Protein kinase sce4054 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449879 Nonpathogen - hypothetical protein sce1608 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162450099 Nonpathogen - hypothetical protein sce1828 2 None None None 162450026 Common - hypothetical protein sce1755 14 None None None 162455050 Common - hypothetical protein sce6768 11 None None None 162448671 Common - Protein kinase sce0401 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450472 Nonpathogen - hypothetical protein sce2200 1 None None None 162457593 Nonpathogen - hypothetical protein sce9307 1 COG4402 COG4402, Uncharacterized protein conserved in bacteria Function unknown 162450390 Common - putative oxidoreductase sce2118 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162454562 Nonpathogen - hypothetical protein sce6282 1 None None None 162455102 Common - ABC transporter, ATP-binding protein sce6820 248 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162456173 Common - Protein kinase sce7890 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454574 Nonpathogen - hypothetical protein sce6294 1 None None None 162451007 Nonpathogen - hypothetical protein sce2735 3 None None None 162454935 Nonpathogen - hypothetical protein sce6653 1 None None None 162451552 Common - Sigma-54 dependent transcriptional regulator sce3280 172 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162455802 Common - putative hydrolase sce7520 114 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162455307 Common - putative nuclease sce7025 15 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 162453728 Common - conserved hypothetical protein with a signal peptide sce5452 8 None None None 162454860 Common - hypothetical protein sce6578 6 None None None 162450325 Nonpathogen - hypothetical protein sce2053 1 None None None 162456335 Common - sensor histidine kinase sce8052 178 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162449709 Common - small subunit of cytochrome c nitrite reductase sce1438 33 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 162452191 Nonpathogen - hypothetical protein sce3918 1 COG4907 COG4907, Predicted membrane protein Function unknown 162457591 Common potB2 spermidine/putrescine ABC transporter, permease protein sce9305 199 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 162456933 Common - Protein kinase sce8650 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457489 Nonpathogen - hypothetical protein sce9203 1 None None None 162453190 Common - hypothetical protein sce4914 52 COG3665 COG3665, Uncharacterized conserved protein Function unknown 162456863 Common phaE pH adaptation potassium efflux protein PhaE sce8580 50 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 162456329 Common - Putative neutral zinc metallopeptidases sce8046 65 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 162451948 Common - hypothetical protein sce3675 192 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 162451580 Common - put.Periplasmic protein precursor sce3308 94 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162453578 Common fabG10 3-oxoacyl-[acyl-carrier-protein] reductase sce5302 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162453661 Nonpathogen - hypothetical protein sce5385 1 None None None 162452021 Common - sugar phosphatase sce3748 97 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 162452083 Common def1 Polypeptide deformylase sce3810 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 162455183 Common - hypothetical protein sce6901 14 None None None 162448645 Nonpathogen - hypothetical protein sce0375 1 None None None 162450457 Common - ECF-family RNA polymerase sigma factor sce2185 23 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454258 Nonpathogen - putative secreted protein sce5981 1 None None None 162450879 Common - hypothetical protein sce2607 2 None None None 162452567 Common hutI Imidazolonepropionase sce4291 98 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 162452630 Common opcA Putative OxPPCycle protein OpcA sce4354 6 COG3429 COG3429, Glucose-6-P dehydrogenase subunit Carbohydrate transport and metabolism 162456757 Common - pentapeptide repeats hypothetical protein sce8474 100 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162448443 Common - hypothetical protein sce0173 27 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162454629 Nonpathogen - hypothetical protein sce6349 1 None None None 162451012 Nonpathogen - hypothetical protein sce2740 1 None None None 162457247 Common - hypothetical protein sce8962 3 COG1754 COG1754, Uncharacterized C-terminal domain of topoisomerase IA General function prediction only 162452198 Nonpathogen - hypothetical protein sce3925 5 COG2018 COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid General function prediction only 162453181 Nonpathogen - putative secreted protein sce4905 1 None None None 162455413 Common fpgX DNA-formamidopyrimidine glycosylase sce7131 168 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 162453422 Common - hypothetical protein sce5146 7 None None None 162454369 Nonpathogen - PE-PGRS family protein sce6092 2 None None None 162452768 Common - hypothetical protein sce4492 16 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 162449558 Nonpathogen - hypothetical protein sce1287 1 None None None 162455432 Common - predicted subtilisin like protease sce7150 101 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162449442 Nonpathogen - hypothetical protein sce1172 1 None None None 162449990 Common - ADP-ribose pyrophosphatase sce1719 163 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162449948 Common - hypothetical protein sce1677 70 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162455187 Common fadB enoyl-CoA hydratase sce6905 155 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162451329 Common - Multiple sugar transport system substrate-binding protein sce3057 79 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162454152 Common allB Allantoinase sce5876 211 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 162455249 Common - probable two-component response regulator sce6967 23 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449663 Common - hypothetical protein sce1392 34 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 162450467 Common gst7 putative glutathione transferase sce2195 103 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162454951 Nonpathogen - hypothetical protein sce6669 1 None None None 162452557 Common gatA4 glutamyl-tRNA(Gln) amidotransferase subunit A sce4281 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162453460 Nonpathogen - transposase sce5184 9 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162454707 Nonpathogen - hypothetical protein sce6425 1 None None None 162449459 Common - two-component histidine kinase sce1189 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450743 Common - hypothetical protein sce2471 60 None None None 162454762 Common - putative exported peptidase sce6480 181 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 162456239 Common rplP 50S ribosomal protein L16 sce7956 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 162454699 Common gabT1 4-aminobutyrate transaminase sce6419 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 162456593 Nonpathogen - putative secreted protein sce8310 1 None None None 162455640 Nonpathogen - hypothetical protein sce7358 1 None None None 162453949 Common - probable S-adenosylmethionine decarboxylase sce5673 26 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 162456308 Common - putative NADH dehydrogenase (ubiquinone) sce8025 159 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 162454622 Nonpathogen - hypothetical protein sce6342 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451604 Common - transcriptional regulator, AraC family sce3332 67 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162455288 Common - hypothetical protein sce7006 31 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162452417 Common - hypothetical protein sce4141 3 None None None 162451598 Nonpathogen - putative secreted protein sce3326 1 None None None 162449674 Common - anti-anti-sigma factor protein sce1403 85 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162452260 Common tkt1 hypothetical protein sce3987 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 162448290 Nonpathogen kpH Pseudouridylate synthase sce0021 7 None None None 162451460 Common - Polyketide synthase sce3188 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162450992 Common - hypothetical protein sce2720 83 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162452471 Common - putative Fe-S oxidoreductase sce4195 121 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162455263 Common - conserved carbohydrate-binding protein, Rhs family sce6981 67 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162449921 Common - two-component response regulator sce1650 217 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455654 Nonpathogen - hypothetical protein sce7372 1 None None None 162452941 Common - Rhs element Vgr protein sce4665 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450465 Nonpathogen - hypothetical protein sce2193 1 None None None 162451570 Nonpathogen - PE-PGRS family protein sce3298 6 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162453704 Common - hypothetical protein sce5428 3 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451122 Common - heme exporter protein C sce2850 155 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 162454276 Nonpathogen - hypothetical protein sce5999 1 None None None 162450232 Common ubiG1 3-demethylubiquinone-9 3-O-methyltransferase sce1960 176 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162450870 Nonpathogen - stigma-specific Stig1 family protein sce2598 3 None None None 162452123 Common - Protein kinase sce3850 153 COG3899 COG3899, Predicted ATPase General function prediction only 162455883 Common - hypothetical protein sce7601 8 None None None 162456561 Common - histone-like protein sce8278 27 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 162455052 Common - hypothetical protein sce6770 29 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 162449189 Nonpathogen - hypothetical protein sce0919 2 COG0388 COG0388, Predicted amidohydrolase General function prediction only 162456176 Common - hypothetical protein sce7893 27 None None None 162451175 Common - cytochrome c family protein sce2903 23 None None None 162450955 Common - hypothetical protein sce2683 109 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162453060 Common galE5 hypothetical protein sce4784 236 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162450838 Nonpathogen - hypothetical protein sce2566 2 None None None 162450637 Common - ECF-family RNA polymerase sigma factor sce2365 27 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451915 Nonpathogen - hypothetical protein sce3642 1 None None None 162454896 Common - transposase sce6614 9 None None None 162455242 Common - alkyl hydroperoxide reductase subunit F sce6960 245 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 162448751 Common - hypothetical protein sce0481 18 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162450051 Nonpathogen - hypothetical protein sce1780 1 None None None 162450097 Common gnl1 hypothetical protein sce1826 67 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162454995 Common - DNA integration/recombination/invertion protein sce6713 9 COG0582 XerC, Integrase DNA replication, recombination, and repair 162456408 Common - two-component hybrid histidine kinase sce8125 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451620 Nonpathogen - hypothetical protein sce3348 2 None None None 162454108 Common - Probable pectate lyase precursor sce5832 14 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 162451038 Common - hypothetical protein sce2765 55 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 162453305 Common - hypothetical protein sce5029 32 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 162451043 Nonpathogen - hypothetical protein sce2771 1 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 162449997 Common - Probable oxidoreductase sce1726 9 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162451967 Common - hypothetical protein sce3694 54 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 162450002 Nonpathogen - hypothetical protein sce1731 1 None None None 162452056 Common - cell wall surface anchor family protein sce3783 13 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162453352 Common lolA1 hypothetical protein sce5076 55 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 162450977 Nonpathogen - hypothetical protein sce2705 1 None None None 162455621 Nonpathogen - hypothetical protein sce7339 1 None None None 162456562 Common - hypothetical protein sce8279 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 162451368 Common pp2c6 Phosphoprotein phosphatase sce3096 138 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162453608 Nonpathogen - hypothetical protein sce5332 1 None None None 162457614 Nonpathogen - hypothetical protein sce9328 1 None None None 162449838 Nonpathogen - hypothetical protein sce1567 1 None None None 162455039 Common - hypothetical protein sce6757 36 COG1479 COG1479, Uncharacterized conserved protein Function unknown 162452070 Nonpathogen - hypothetical protein sce3797 1 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 162452153 Common mxcE (2,3-dihydroxybenzoyl)adenylate synthase sce3880 222 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 162455030 Common - hypothetical protein sce6748 36 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 162448499 Common - hypothetical protein sce0229 10 None None None 162451911 Common - hypothetical protein sce3638 8 COG1520 COG1520, FOG: WD40-like repeat Function unknown 162452385 Common - hypothetical protein sce4109 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450896 Common recA1 RecA protein sce2624 229 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 162449170 Nonpathogen - hypothetical protein sce0900 1 None None None 162457187 Nonpathogen - hypothetical protein sce8902 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162450990 Nonpathogen - hypothetical protein sce2718 1 None None None 162451616 Nonpathogen - hypothetical protein sce3344 1 None None None 162452755 Common - putative ABC transport system ATP-binding protein sce4479 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 162456621 Nonpathogen - hypothetical protein sce8338 1 None None None 162449749 Nonpathogen - hypothetical protein sce1478 1 None None None 162450633 Nonpathogen - hypothetical protein sce2361 1 None None None 162456600 Common - hypothetical protein sce8317 68 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162450566 Nonpathogen - putative secreted protein sce2294 6 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162454963 Common - glycosyltransferase sce6681 110 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 162452501 Nonpathogen - hypothetical protein sce4225 1 COG5180 PBP1, Protein interacting with poly(A)-binding protein RNA processing and modification 162449953 Common hemH2 Ferrochelatase sce1682 172 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 162451857 Common - glycosyltransferase sce3584 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 162451272 Common - hypothetical protein sce3000 86 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 162454361 Common - probable integrase/recombinase sce6084 27 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162452091 Common - ribosomal protein L32 sce3818 82 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 162456978 Nonpathogen - hypothetical protein sce8694 1 None None None 162448408 Nonpathogen - hypothetical protein sce0138 4 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 162451769 Nonpathogen - hypothetical protein sce3496 1 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451297 Nonpathogen - hypothetical protein sce3025 1 None None None 162455601 Nonpathogen - hypothetical protein sce7319 1 None None None 162448325 Common - hypothetical protein sce0056 43 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 162449637 Common - permease of the major facilitator superfamily sce1366 35 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162452970 Nonpathogen - hypothetical protein sce4694 5 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162452132 Nonpathogen - hypothetical protein sce3859 1 None None None 162451066 Nonpathogen - putative secreted protein sce2794 16 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162455351 Nonpathogen - ECF-family RNA polymerase sigma factor sce7069 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457306 Nonpathogen - hypothetical protein sce9021 1 COG0824 FcbC, Predicted thioesterase General function prediction only 162454184 Common - hypothetical protein sce5907 203 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162449353 Nonpathogen - hypothetical protein sce1083 2 None None None 162455357 Nonpathogen - hypothetical protein sce7075 1 None None None 162456605 Nonpathogen - hypothetical protein sce8322 1 None None None 162451112 Nonpathogen - hypothetical protein sce2840 7 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 162450666 Nonpathogen - hypothetical protein sce2394 1 None None None 162457102 Common - putative Zn-dependent hydrolases, including glyoxylases sce8817 31 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162456755 Common - hypothetical protein sce8472 6 None None None 162454437 Nonpathogen - hypothetical protein sce6156 1 None None None 162453105 Nonpathogen - hypothetical protein sce4829 1 None None None 162454874 Nonpathogen - hypothetical protein sce6592 5 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 162456803 Nonpathogen - putative phytoene dehydrogenase sce8520 3 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162452530 Nonpathogen tonB1 putative TonB protein sce4254 4 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 162453785 Nonpathogen - hypothetical protein sce5509 1 None None None 162450787 Nonpathogen - hypothetical protein sce2515 4 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162449836 Nonpathogen - hypothetical protein sce1565 1 None None None 162453668 Common msrA1 peptide methionine sulfoxide reductase sce5392 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 162450058 Nonpathogen - hypothetical protein sce1785 1 None None None 162449285 Common - conserved hypothetical protein yfbK-containing vWFA domain sce1015 29 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162450895 Common - Predicted ATPase with chaperone activity, ComM homolog sce2623 188 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 162455301 Common - put. Polysaccharide deacetylase sce7019 31 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162450211 Common - two-component hybrid sensor and regulator sce1939 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451302 Nonpathogen - hypothetical protein sce3030 1 None None None 162452776 Common - hypothetical protein sce4500 19 None None None 162449385 Common - hypothetical protein sce1115 39 COG2323 COG2323, Predicted membrane protein Function unknown 162454817 Nonpathogen - putative exported peptidase sce6535 9 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 162453819 Nonpathogen - hypothetical protein sce5543 1 None None None 162455800 Common - hypothetical protein sce7518 27 COG3744 COG3744, Uncharacterized protein conserved in bacteria Function unknown 162449701 Common - hypothetical protein sce1430 30 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 162451075 Nonpathogen - putative secreted protein sce2803 1 None None None 162450248 Nonpathogen - hypothetical protein sce1976 1 None None None 162452526 Common thiC thiamin biosynthesis protein sce4250 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 162453286 Common - putative hydrolase sce5010 36 COG2267 PldB, Lysophospholipase Lipid metabolism 162453257 Common - hypothetical protein sce4981 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 162450331 Nonpathogen - putative alanine/arginine/proline-rich membrane protein sce2059 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162450745 Common - hypothetical protein sce2473 7 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 162455088 Common - Nucleic acid-binding protein sce6806 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 162455670 Common - hypothetical protein sce7388 10 COG3463 COG3463, Predicted membrane protein Function unknown 162455521 Common pyrG3 CTP synthase sce7239 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 162453374 Common - G/U mismatch-specific DNA glycosylase sce5098 29 COG3663 Mug, G:T/U mismatch-specific DNA glycosylase DNA replication, recombination, and repair 162448618 Nonpathogen - putative secreted protein sce0348 1 None None None 162456248 Common phoH2 PhoH family protein sce7965 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 162451698 Common - Phosphofructokinase-domain containing protein sce3426 126 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 162451806 Common - peptidase, M23/M37 family sce3533 187 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 162455366 Nonpathogen - hypothetical protein sce7084 1 None None None 162456464 Nonpathogen - hypothetical protein sce8181 6 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162448351 Nonpathogen - hypothetical protein sce0082 2 None None None 162450520 Nonpathogen - hypothetical protein sce2248 1 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 162450984 Nonpathogen - hypothetical protein sce2712 1 None None None 162450205 Common mnhD Putative Na(+)/H(+) antiporter subunit D sce1933 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 162455967 Common - SC4G2.10, pglZ; bacteriophage (phiC31) resistance gene pglZ sce7685 9 None None None 162448312 Common - hypothetical protein sce0043 9 COG3608 COG3608, Predicted deacylase General function prediction only 162456776 Common nirD Nitrite reductase (NAD(P)H) sce8493 47 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 162451970 Common - ABC transporter ATP-binding protein sce3697 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 162457180 Common purA hypothetical protein sce8895 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 162449245 Nonpathogen - hypothetical protein sce0975 3 None None None 162454131 Nonpathogen - putative secreted protein sce5855 1 None None None 162448635 Common petB cytochrome b6 sce0365 145 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 162448996 Nonpathogen - hypothetical protein sce0726 1 COG5328 COG5328, Uncharacterized protein conserved in bacteria Function unknown 162451771 Nonpathogen - hypothetical protein sce3498 1 None None None 162449733 Common - hypothetical protein sce1462 62 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162454451 Common pp2c11 Phosphoprotein phosphatase sce6171 139 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162448809 Nonpathogen - hypothetical protein sce0539 1 None None None 162454569 Nonpathogen - hypothetical protein sce6289 1 None None None 162455585 Common - Putative Dehyrogenase sce7303 49 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 162448383 Nonpathogen - hypothetical protein sce0113 1 None None None 162454144 Common proC hypothetical protein sce5868 213 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 162450970 Nonpathogen - hypothetical protein sce2698 1 None None None 162456487 Common - putative helicase sce8204 104 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 162457057 Common - IstB-like ATP-binding protein sce8772 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162451978 Common cutE hypothetical protein sce3705 166 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 162452545 Common pyrC Dihydroorotase sce4269 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 162455688 Common - putative histidine kinase sce7406 142 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 162449130 Nonpathogen - hypothetical protein sce0860 1 COG1434 COG1434, Uncharacterized conserved protein Function unknown 162450710 Common qxtB Probable terminal oxidase subunit II sce2438 125 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 162456614 Nonpathogen - probable serine protease sce8331 1 None None None 162453499 Common - putative DeoR-family transcriptional regulator sce5223 60 COG2378 COG2378, Predicted transcriptional regulator Transcription 162454280 Common - Protein kinase sce6003 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453978 Nonpathogen - putative proteinase inhibitor precursor. sce5702 1 None None None 162454473 Common uppS2 Undecaprenyl diphosphate synthase sce6193 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 162457605 Common - Alcohol dehydrogenase. sce9319 175 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162452377 Common - put. Polysaccharide deacetylase sce4101 39 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162456712 Common - Protein kinase sce8429 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455045 Nonpathogen - hypothetical protein sce6763 1 None None None 162454150 Common - hypothetical protein sce5874 7 None None None 162450378 Nonpathogen - hypothetical protein sce2106 1 None None None 162455108 Common - two-component hybrid sensor and regulator sce6826 226 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162449136 Common - hypothetical protein sce0866 8 None None None 162453726 Nonpathogen - hypothetical protein sce5450 1 None None None 162455116 Common - ECF-family RNA polymerase sigma factor sce6834 65 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453516 Nonpathogen - hypothetical protein sce5240 5 None None None 162451542 Common - hypothetical protein sce3270 2 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 162456656 Common - hypothetical protein sce8373 45 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162448880 Common - hypothetical protein sce0610 13 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162452189 Nonpathogen - hypothetical protein sce3916 1 None None None 162457565 Nonpathogen - hypothetical protein sce9279 1 None None None 162450868 Common - hypothetical protein sce2596 27 None None None 162452484 Nonpathogen - hypothetical protein sce4208 1 None None None 162457391 Nonpathogen - putative secreted protein with fibro-slime domain sce9106 4 None None None 162453143 Common celH Cellulase sce4867 23 COG4124 ManB, Beta-mannanase Carbohydrate transport and metabolism 162450845 Nonpathogen - hypothetical protein sce2573 1 None None None 162449827 Nonpathogen - hypothetical protein sce1556 2 None None None 162455233 Common - hypothetical protein sce6951 26 COG4398 COG4398, Uncharacterized protein conserved in bacteria Function unknown 162456371 Nonpathogen - hypothetical protein sce8088 1 None None None 162452394 Nonpathogen - hypothetical protein sce4118 1 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 162456037 Common - sugar ABC transporter, ATP-binding protein sce7755 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 162455341 Nonpathogen - no similarity sce7059 1 None None None 162455849 Nonpathogen - hypothetical protein sce7567 1 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 162456814 Common - hypothetical protein sce8531 7 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 162449312 Nonpathogen - hypothetical protein sce1042 2 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162450505 Common - hypothetical protein sce2233 3 None None None 162450779 Common - oxidoreductase sce2507 27 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162451933 Nonpathogen - hypothetical protein sce3660 1 None None None 162450718 Nonpathogen - hypothetical protein sce2446 1 COG5373 COG5373, Predicted membrane protein Function unknown 162453531 Nonpathogen - hypothetical protein sce5255 1 None None None 162457637 Nonpathogen - hypothetical protein sce9351 3 None None None 162451921 Common dppB ABC transporter permease protein sce3648 203 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162452429 Common serA1 Phosphoglycerate dehydrogenase sce4153 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 162450588 Common - MutT/nudix family protein, probable sce2316 79 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 162451595 Common - Sugar ABC transporter ATP-binding protein sce3323 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162454290 Common - hypothetical protein sce6013 198 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457450 Common gcvP2 Glycine dehydrogenase (decarboxylating) sce9164 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 162451145 Common yihX haloacid dehalogenase-like hydrolase family protein sce2873 37 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 162452745 Common lexA LexA repressor sce4469 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 162456251 Nonpathogen - hypothetical protein sce7968 1 None None None 162449079 Nonpathogen - hypothetical protein sce0809 1 None None None 162449428 Common - hypothetical protein sce1158 140 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 162448511 Nonpathogen vrrB hypothetical protein sce0241 1 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 162453099 Common - ABC transporter, ATP-binding protein sce4823 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162454587 Nonpathogen - putative dehydrogenase sce6307 1 None None None 162451242 Common yoaA ATP-dependent helicase sce2970 130 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 162457398 Nonpathogen - putative secreted protein sce9113 8 None None None 162450604 Common - hypothetical protein sce2332 4 COG2433 COG2433, Uncharacterized conserved protein Function unknown 162456772 Nonpathogen - hypothetical protein sce8489 1 None None None 162448359 Common - transcriptional regulator, AraC family sce0089 84 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 162455461 Nonpathogen - hypothetical protein sce7179 1 None None None 162457355 Nonpathogen - hypothetical protein sce9070 3 None None None 162450927 Common - two-component hybrid sensor and regulator sce2655 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162452909 Common cypA2 Cytochrome P450 CYP109D1 sce4633 87 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162454790 Nonpathogen - hypothetical protein sce6508 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162450678 Common - RNA-binding protein sce2406 38 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 162449514 Common dgoT permease of the major facilitator superfamily,putative D-galactonate transporter sce1244 194 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 162454682 Nonpathogen - hypothetical protein sce6402 2 None None None 162457113 Common - two-component hybrid sensor and regulator sce8828 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162450397 Common - hypothetical protein sce2125 15 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162452139 Common - hypothetical protein sce3866 9 None None None 162457029 Common ndhF2 probable NADH dehydrogenase subunit sce8744 198 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 162449897 Common - hypothetical protein sce1626 35 COG1543 COG1543, Uncharacterized conserved protein Function unknown 162452610 Nonpathogen - hypothetical protein sce4334 1 None None None 162454233 Common - transcriptional regulator (TetR/AcrR family) sce5956 98 COG1309 AcrR, Transcriptional regulator Transcription 162453407 Common - hypothetical protein sce5132 5 None None None 162449275 Common - Macrolide-specific ABC-type efflux carrier. sce1005 136 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 162449476 Nonpathogen - hypothetical protein sce1206 2 None None None 162452614 Common - Protein kinase sce4338 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457524 Common ugcG ceramide glucosyltransferase sce9238 29 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162450543 Nonpathogen - hypothetical protein sce2271 1 None None None 162449874 Common - Protein kinase sce1603 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449256 Nonpathogen - hypothetical protein sce0986 1 None None None 162457059 Nonpathogen - hypothetical protein sce8774 1 None None None 162448545 Nonpathogen - hypothetical protein sce0275 1 None None None 162452437 Nonpathogen - hypothetical protein sce4160 1 None None None 162457368 Nonpathogen - hypothetical protein sce9083 1 None None None 162450764 Common yqjF hypothetical protein yqjF sce2492 18 COG3361 COG3361, Uncharacterized conserved protein Function unknown 162451143 Common - hypothetical protein sce2871 4 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162454252 Nonpathogen - hypothetical protein sce5975 2 COG5649 COG5649, Uncharacterized conserved protein Function unknown 162455625 Common - hypothetical protein sce7343 2 None None None 162453077 Common hyfB hydrogenase-4 component B sce4801 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 162451331 Common - Sugar ABC transporter, permease protein sce3059 161 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 162457192 Nonpathogen - hypothetical protein sce8907 1 None None None 162456162 Common yhjG4 putative FAD-binding monooxygenase sce7879 122 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162448518 Nonpathogen - hypothetical protein sce0248 1 None None None 162455385 Common - hypothetical protein sce7103 6 COG5498 ACF2, Predicted glycosyl hydrolase Cell envelope biogenesis, outer membrane 162455677 Common - putative secreted protein sce7395 38 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 162450831 Nonpathogen - hypothetical protein sce2559 2 COG0457 NrfG, FOG: TPR repeat General function prediction only 162454477 Nonpathogen - hypothetical protein sce6197 1 None None None 162451579 Common - put. ATP-binding component of a transport system sce3307 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162454754 Common - Sigma-54 dependent transcriptional regulator sce6472 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162448661 Nonpathogen - hypothetical protein sce0391 3 None None None 162449007 Common - anti-anti sigma factor protein sce0737 32 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162453215 Common asnH hypothetical protein sce4939 151 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 162455807 Common - putative hydroxylase sce7525 71 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162455995 Nonpathogen - hypothetical protein sce7713 2 None None None 162455081 Common - hypothetical protein sce6799 20 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 162452606 Common - putative 1-acyl-sn-glycerol-3-phosphate acyltransferase sce4330 24 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162452370 Nonpathogen - hypothetical protein sce4094 1 None None None 162456208 Common - Protein kinase sce7925 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448364 Nonpathogen - hypothetical protein sce0094 1 None None None 162453083 Common - probable FAD-dependent monooxygenase sce4807 70 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 162455064 Nonpathogen - hypothetical protein sce6782 15 None None None 162449620 Nonpathogen - hypothetical protein sce1349 1 None None None 162448589 Common - probable DNA modification methyltransferase sce0319 49 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 162448773 Common copA multicopper oxidase sce0503 124 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162451732 Common oppC oligopeptide transport permease protein sce3459 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162454136 Common - ECF-family RNA polymerase sigma factor sce5860 157 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456532 Common nolG AcrB/AcrD/AcrF family protein sce8249 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 162450495 Common - put. Sugar transport system permease sce2223 89 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162454334 Common gidB putative glucose-inhibited division protein sce6057 155 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 162457417 Nonpathogen - hypothetical protein sce9131 1 None None None 162452766 Common - putative secreted protein sce4490 17 COG5373 COG5373, Predicted membrane protein Function unknown 162453538 Nonpathogen - hypothetical protein sce5262 1 COG4907 COG4907, Predicted membrane protein Function unknown 162457159 Nonpathogen - putative secreted protein sce8874 1 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 162448701 Common - Protein kinase sce0431 147 COG3899 COG3899, Predicted ATPase General function prediction only 162448503 Common - hypothetical protein sce0233 2 None None None 162449845 Common - translation initiation factor IF-2B alpha subunit sce1574 130 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 162451829 Nonpathogen - LPXTG-motif cell wall anchor domain protein sce3556 1 None None None 162453003 Nonpathogen - hypothetical protein sce4727 1 None None None 162449548 Nonpathogen - hypothetical protein sce1277 1 None None None 162449094 Nonpathogen - hypothetical protein sce0824 1 None None None 162456742 Common - hypothetical protein sce8459 4 None None None 162455714 Nonpathogen - putative S-layer-like protein sce7432 6 COG0457 NrfG, FOG: TPR repeat General function prediction only 162449468 Nonpathogen - hypothetical protein sce1198 2 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 162455452 Common - Alpha-amylase-family protein sce7170 160 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 162450702 Common - hypothetical protein sce2430 47 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 162456878 Nonpathogen - putative secreted protein sce8595 2 None None None 162453844 Common nrd nitrilotriacetate monooxygenase component A sce5568 74 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 162456383 Common - multicopper oxidase sce8100 140 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162456480 Nonpathogen - hypothetical protein sce8197 1 None None None 162454538 Common - hypothetical protein sce6258 60 COG2013 COG2013, Uncharacterized conserved protein Function unknown 162454156 Common - hypothetical protein sce5880 96 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162453148 Common - putative lactoylglutathione lyase and related lyases sce4872 7 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162451663 Common pheS Phenylalanyl-tRNA synthetase, alpha subunit sce3391 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 162449316 Nonpathogen - hypothetical protein sce1046 1 None None None 162451320 Common - hypothetical protein sce3048 42 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162453839 Common - transposase sce5563 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162452799 Common - Cytochrome-c oxidase sce4523 161 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 162449946 Nonpathogen - Putative peptidase sce1675 1 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 162449801 Common gst5 hypothetical protein sce1530 3 None None None 162452790 Common - hypothetical protein sce4515 26 None None None 162448945 Common - Cytochrome P450 CYP267A1 sce0675 77 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162452698 Common - putative ABC-2 type transport system permease protein sce4422 46 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 162451880 Nonpathogen - hypothetical protein sce3607 13 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162457608 Common - transcriptional regulator, MarR family sce9322 33 COG1846 MarR, Transcriptional regulators Transcription 162455701 Common - hypothetical protein sce7419 19 COG3417 FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) General function prediction only 162456798 Nonpathogen - hypothetical protein sce8515 1 None None None 162452359 Common - hypothetical protein sce4083 6 None None None 162452930 Nonpathogen - hypothetical protein sce4654 1 None None None 162448322 Nonpathogen - hypothetical protein sce0053 1 None None None 162450852 Common pepA1 hypothetical protein sce2580 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 162449919 Common - bacterioferritin sce1648 108 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 162454649 Common - putative Pentalenene synthase sce6369 12 None None None 162448983 Common - two-component hybrid sensor and regulator sce0713 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451332 Nonpathogen - hypothetical protein sce3060 2 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 162451101 Nonpathogen - hypothetical protein sce2829 1 None None None 162454834 Common - response regulator sce6552 177 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162448537 Nonpathogen - hypothetical protein sce0267 3 None None None 162449179 Common - nucleotide-binding enzyme sce0909 19 COG2413 COG2413, Predicted nucleotidyltransferase General function prediction only 162453858 Common - Putative ABC transporter ATP-binding protein sce5582 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 162453129 Common - hypothetical protein sce4853 28 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 162457272 Nonpathogen - hypothetical protein sce8987 6 None None None 162455165 Common - hypothetical protein sce6883 186 COG0628 PerM, Predicted permease General function prediction only 162456530 Common - transcriptional regulator, TetR family sce8247 55 COG1309 AcrR, Transcriptional regulator Transcription 162448731 Nonpathogen - hypothetical protein sce0461 1 None None None 162449890 Common - hypothetical protein sce1619 88 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162448491 Common - hypothetical protein sce0221 39 COG4748 COG4748, Uncharacterized conserved protein Function unknown 162453025 Common gst10 glutathione S-transferase, putative sce4749 115 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448893 Nonpathogen - hypothetical protein sce0623 1 None None None 162449577 Common - assimilatory nitrite reductase small subunit sce1306 64 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 162454391 Nonpathogen - hypothetical protein sce6112 1 None None None 162453867 Nonpathogen - hypothetical protein sce5591 1 None None None 162448374 Common - hypothetical protein sce0104 3 None None None 162453383 Common - two-component hybrid sensor and regulator sce5107 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162456195 Nonpathogen - hypothetical protein sce7912 1 None None None 162448467 Common - hypothetical protein sce0197 16 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 162454807 Nonpathogen - hypothetical protein sce6525 5 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 162451850 Common gloA Lactoylglutathione lyase sce3577 126 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162454506 Common - hypothetical protein sce6226 7 None None None 162456760 Common - rhs family protein sce8477 49 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162456884 Common capK1 capK related-protein sce8601 112 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 162452245 Nonpathogen - hypothetical protein sce3972 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162451839 Nonpathogen - hypothetical protein sce3566 1 COG4907 COG4907, Predicted membrane protein Function unknown 162450917 Nonpathogen - hypothetical protein sce2645 1 None None None 162453568 Nonpathogen - hypothetical protein sce5292 1 None None None 162450564 Common - hypothetical protein sce2292 3 COG2391 COG2391, Predicted transporter component General function prediction only 162455977 Nonpathogen - putative RNA lariat debranching enzyme sce7695 3 COG2129 COG2129, Predicted phosphoesterases, related to the Icc protein General function prediction only 162456389 Common copF cation-transporting ATPase sce8106 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 162448651 Nonpathogen - hypothetical protein sce0381 1 None None None 162454419 Nonpathogen - transposase pseudogene sce_pseudo_10 1 None None None 162449521 Common - hypothetical protein sce1251 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 162448398 Nonpathogen - hypothetical protein sce0128 2 None None None 162452421 Nonpathogen - probable PE_PGRS family protein sce4145 1 COG0400 COG0400, Predicted esterase General function prediction only 162456794 Common - conserved hypothetical protein Vgr sce8511 70 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162453702 Nonpathogen - hypothetical protein sce5426 1 None None None 162451545 Common - putative short chain dehydrogenase sce3273 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162450225 Common - hypothetical protein sce1953 52 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162449774 Common - hypothetical protein sce1503 2 None None None 162450641 Common - putative oxidoreductase sce2369 25 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 162450627 Nonpathogen - ECF-family RNA polymerase sigma factor sce2355 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162456987 Nonpathogen - hypothetical protein sce8703 2 COG5373 COG5373, Predicted membrane protein Function unknown 162454541 Common - hypothetical protein sce6261 57 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162452011 Common - Dihydrouridine synthase TIM-barrel protein nifR3 sce3738 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 162449483 Common fabH1 3-oxoacyl-[acyl-carrier-protein] synthase sce1213 199 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162453048 Nonpathogen - transcriptional regulator, TetR family sce4772 1 COG1309 AcrR, Transcriptional regulator Transcription 162452086 Common - Beta-ketoacyl-ACP synthase sce3813 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162456999 Common - two-component hybrid sensor and regulator sce8715 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162452020 Common gmhA Sedoheptulose 7-phosphate isomerase sce3747 117 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 162448314 Common plsC1 1-acylglycerol-3-phosphate O-acyltransferase sce0045 74 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162456475 Common - hypothetical protein sce8192 110 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 162449692 Common - MFP family efflux transporter sce1421 167 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162454824 Common lolA2 outer-membrane lipoprotein carrier protein precursor sce6542 12 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 162455315 Nonpathogen - hypothetical protein sce7033 4 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162448391 Nonpathogen - hypothetical protein sce0121 1 None None None 162450062 Common holB DNA polymerase III delta' subunit sce1791 217 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 162451981 Common - hypothetical protein sce3708 17 COG3359 COG3359, Predicted exonuclease DNA replication, recombination, and repair 162455295 Common - hypothetical protein sce7013 72 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 162457626 Common - hypothetical protein sce9340 39 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 162450264 Common - similar to glycine-rich protein sce1992 24 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162456122 Common - hypothetical protein sce7839 22 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162453997 Nonpathogen - hypothetical protein sce5721 3 None None None 162448782 Nonpathogen - hypothetical protein sce0512 1 None None None 162452670 Nonpathogen - hypothetical protein sce4394 4 None None None 162448331 Common dlhH1 putative carboxymethylenebutenolidase sce0062 114 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162451962 Common - predicted subtilisin like protease sce3689 110 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162454055 Common - Acyl-CoA thioester hydrolase sce5779 119 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 162454387 Common - transposase sce6109 9 None None None 162455606 Common - glycosyltransferase sce7324 227 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 162449217 Common - two-component histidine kinase sce0947 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162455957 Common - Protein kinase sce7675 101 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450295 Common ppiD Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 sce2023 113 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 162453896 Common - putative low-affinity phosphate transport protein sce5620 150 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 162450930 Common cheW6 purine-binding chemotaxis protein CheW sce2658 127 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 162452881 Common - hypothetical protein sce4605 11 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162453988 Common - hypothetical protein sce5712 38 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 162452169 Nonpathogen - hypothetical protein sce3896 1 None None None 162455440 Common argF2 hypothetical protein sce7158 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 162452664 Common glgP Phosphorylase sce4388 140 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 162455750 Common - anti-anti simga factor protein sce7468 34 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162448766 Common - Putative glutathione transferase sce0496 98 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162456313 Common - hypothetical protein sce8030 10 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162450615 Common - putative sodium:sulfate symporter sce2343 82 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 162457572 Nonpathogen - hypothetical protein sce9286 1 None None None 162456419 Common serS2 hypothetical protein sce8136 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 162456315 Common - hypothetical protein sce8032 13 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162449538 Common - hypothetical protein sce1267 51 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 162453630 Nonpathogen - hypothetical protein sce5354 1 None None None 162453646 Common - fibronectin type III domain protein sce5370 18 COG1572 COG1572, Uncharacterized conserved protein Function unknown 162456831 Common - ABC transporter, ATP-binding protein sce8548 209 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 162453110 Nonpathogen cgeB hypothetical protein sce4834 15 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162448861 Common - Probable SAM-dependent methyltransferases sce0591 16 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162449865 Common cheA3 chemotaxis sensor histidine kinase CheA sce1594 152 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162449341 Nonpathogen - hypothetical protein sce1071 1 None None None 162453955 Nonpathogen - hypothetical protein sce5679 7 COG1367 COG1367, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 162450709 Common cydA cytochrome d ubiquinol oxidase, subunit I sce2437 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 162456733 Common - hypothetical protein sce8450 15 None None None 162455633 Common trxA3 thioredoxin sce7351 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162449165 Common - putative exported sugar-binding protein with thrombospondin-like C-terminal domain sce0895 17 None None None 162450533 Common - sensor histidine kinase sce2261 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454611 Nonpathogen - hypothetical protein sce6331 2 None None None 162454775 Nonpathogen - hypothetical protein sce6493 1 None None None 162455616 Common - putative ferredoxin, 2Fe-2S sce7334 62 COG0633 Fdx, Ferredoxin Energy production and conversion 162450888 Nonpathogen - hypothetical protein sce2616 1 None None None 162449964 Nonpathogen - hypothetical protein sce1693 1 None None None 162449740 Nonpathogen - hypothetical protein sce1469 1 None None None 162450651 Common - Protein kinase sce2379 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452924 Common - putative secreted protein sce4648 22 None None None 162453911 Nonpathogen - hypothetical protein sce5635 3 COG2191 COG2191, Formylmethanofuran dehydrogenase subunit E Energy production and conversion 162456850 Nonpathogen - hypothetical protein sce8567 1 None None None 162448275 Common - cation-translocating P-type ATPase sce0006 210 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 162456868 Common - transcriptional regulator, LysR family sce8585 87 COG0583 LysR, Transcriptional regulator Transcription 162457133 Common gst19 hypothetical protein sce8848 95 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162450619 Common - hypothetical protein sce2347 4 None None None 162453486 Nonpathogen - hypothetical protein sce5210 6 None None None 162449349 Common - universal stress protein family sce1079 138 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162456102 Nonpathogen - hypothetical protein sce7820 1 None None None 162454615 Common - cytochrome c-type protein sce6335 13 None None None 162451513 Common - hypothetical protein sce3241 33 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 162452702 Common - Protein kinase sce4426 111 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449773 Common mopB1 outer membrane protein sce1502 149 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452996 Nonpathogen - hypothetical protein sce4720 6 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162450903 Nonpathogen - hypothetical protein sce2631 1 None None None 162452207 Nonpathogen - hypothetical protein sce3934 1 None None None 162452457 Nonpathogen - hypothetical protein sce4181 1 None None None 162453116 Common - hypothetical protein sce4840 6 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 162455926 Common - putative hydrolase sce7644 57 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162456133 Nonpathogen - Alpha-L-arabinofuranosidase precursor sce7850 2 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162457321 Nonpathogen - hypothetical protein sce9036 1 None None None 162456891 Common - glycosyltransferase sce8608 160 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162452308 Common nrtD nitrate/nitrite ABC transporter ATP-binding protein sce4034 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162452349 Common folD2 Methylenetetrahydrofolate dehydrogenase (NAD(+)) sce4073 212 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 162452782 Nonpathogen - hypothetical protein sce4506 1 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 162455815 Nonpathogen - hypothetical protein sce7533 1 None None None 162457206 Common - hypothetical protein sce8922 60 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 162449307 Common - NDP-sugar oxidoreductase sce1037 231 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162449505 Common - hypothetical protein sce1235 15 COG5373 COG5373, Predicted membrane protein Function unknown 162451710 Nonpathogen - hypothetical protein sce3438 2 None None None 162452465 Common - hypothetical protein sce4189 3 None None None 162454090 Common - hypothetical protein sce5814 219 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162453034 Nonpathogen - hypothetical protein sce4758 3 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 162452513 Common - hypothetical protein sce4237 23 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162455722 Nonpathogen - putative secreted protein sce7440 1 COG4907 COG4907, Predicted membrane protein Function unknown 162450418 Common - putative Methyltransferase sce2146 60 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 162455093 Common - DNA repair protein sce6811 122 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 162456201 Common recD putative exodeoxyribonuclease V sce7918 148 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 162457343 Common nuoA2 NADH dehydrogenase (ubiquinone). sce9058 160 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 162454083 Common - Protein kinase sce5807 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454588 Common - transcriptional regulator, TetR family sce6308 56 COG1309 AcrR, Transcriptional regulator Transcription 162455630 Common tpi Triose-phosphate isomerase sce7348 220 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 162456074 Common - hypothetical protein sce7792 4 COG5031 COQ4, Uncharacterized protein involved in ubiquinone biosynthesis Coenzyme metabolism 162452489 Common - hypothetical carbohydrate-binding protein, Rhs family sce4213 65 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162456552 Common aspS hypothetical protein sce8269 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162453287 Common - hypothetical protein sce5011 13 COG2886 COG2886, Uncharacterized small protein Function unknown 162455447 Nonpathogen - hypothetical protein sce7165 1 None None None 162457095 Common - oxidoreductase, short-chain dehydrogenase/reductase family sce8810 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162451207 Common - positive regulator of sigma-B sce2935 124 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162450513 Nonpathogen syrM transcriptional regulator syrM sce2241 1 None None None 162449938 Common ftsA cell division protein FtsA sce1667 189 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 162450282 Nonpathogen - hypothetical protein sce2010 1 None None None 162450997 Common - probable phosphotransferase sce2725 19 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 162449567 Common - two-component sensor histidine kinase sce1296 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162449091 Common - hypothetical protein sce0821 2 None None None 162450407 Common - hypothetical protein sce2135 3 None None None 162450658 Nonpathogen - hypothetical protein sce2386 6 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 162451507 Common - hypothetical protein sce3235 52 COG4637 COG4637, Predicted ATPase General function prediction only 162449000 Nonpathogen - hypothetical protein sce0730 1 None None None 162451500 Common - Sigma-54 dependent transcriptional regulator sce3228 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162452285 Common cadD cadmium resistance transporter, putative sce4012 17 COG4300 CadD, Predicted permease, cadmium resistance protein Inorganic ion transport and metabolism 162450142 Common - transcriptional regulator, AraC family sce1871 39 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162450683 Common ftsI2 Peptidoglycan glycosyltransferase sce2411 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 162453445 Common - hypothetical protein sce5169 14 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162450340 Nonpathogen - putative secreted protein sce2068 2 None None None 162452653 Nonpathogen - putative secreted protein sce4377 1 None None None 162457647 Common atpA H(+)-transporting two-sector ATPase sce9361 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 162451557 Nonpathogen - hypothetical protein sce3285 4 None None None 162455491 Common - Protein kinase sce7209 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451835 Common - Protein kinase sce3562 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450962 Common - putative secreted protein sce2691 16 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162449424 Nonpathogen - hypothetical protein sce1154 1 None None None 162455693 Nonpathogen - hypothetical protein sce7411 1 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 162454463 Common - LysR-family transcriptional regulator sce6183 113 COG0583 LysR, Transcriptional regulator Transcription 162457263 Common - hypothetical protein sce8978 18 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162455975 Nonpathogen - hypothetical protein sce7693 1 None None None 162455040 Nonpathogen - hypothetical protein sce6758 1 None None None 162450847 Common nadC Nicotinate-nucleotide diphosphorylase (carboxylating) sce2575 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 162448551 Nonpathogen - probable signal peptide protein sce0281 6 None None None 162452225 Common gbd alcohol dehydrogenase sce3952 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 162456819 Nonpathogen - hypothetical protein sce8536 1 None None None 162457531 Nonpathogen - hypothetical protein sce9245 1 None None None 162454932 Common - recombinase sce6650 32 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 162455255 Common prlC2 Oligopeptidase A sce6973 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 162450575 Common - hypothetical protein sce2303 18 None None None 162449910 Common aroE1 hypothetical protein sce1639 201 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 162453610 Common - hypothetical protein sce5334 15 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 162450443 Nonpathogen - hypothetical protein sce2171 1 None None None 162450623 Nonpathogen - hypothetical protein sce2351 6 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162451109 Nonpathogen - Putative secreted protein sce2837 1 None None None 162452216 Nonpathogen - hypothetical protein sce3943 1 None None None 162449720 Nonpathogen - putative secreted protein sce1449 1 None None None 162451533 Common trkH potassium uptake protein, TrkH family sce3261 85 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 162451843 Common ycdO hypothetical protein sce3570 7 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 162451444 Common - hypothetical protein sce3172 19 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162454799 Common - hypothetical protein sce6517 68 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162448474 Common pflA2 pyruvate formate-lyase activating enzyme sce0204 95 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 162449416 Nonpathogen - hypothetical protein sce1146 1 COG2732 COG2732, Barstar, RNAse (barnase) inhibitor Transcription 162450782 Nonpathogen - hypothetical protein sce2510 1 None None None 162451259 Nonpathogen - hypothetical protein sce2987 12 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162453440 Nonpathogen - hypothetical protein sce5164 2 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 162455201 Nonpathogen - hypothetical protein sce6919 4 None None None 162448481 Common cobD Adenosylcobinamide-phosphate synthase sce0211 146 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 162452492 Nonpathogen - hypothetical protein sce4216 1 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162448658 Common - hypothetical protein sce0388 79 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 162452517 Common - glycosyltransferase sce4241 205 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162453851 Nonpathogen - TPR domain hypothetical protein sce5575 1 None None None 162452686 Common - hypothetical protein sce4410 17 COG4354 COG4354, Predicted bile acid beta-glucosidase Carbohydrate transport and metabolism 162457538 Common - putative phospholipase D family protein sce9252 110 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162457499 Nonpathogen gspI putative general secretion pathway protein I sce9213 3 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 162454099 Common - hypothetical protein sce5823 10 None None None 162454864 Common - hypothetical protein sce6582 2 None None None 162453120 Common murI glutamate racemase sce4844 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 162452963 Nonpathogen - hypothetical protein sce4687 1 None None None 162449973 Common cspR rRNA methylase (SpoU class) sce1702 160 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 162451280 Common - hypothetical protein sce3008 40 COG1510 COG1510, Predicted transcriptional regulators Transcription 162453269 Nonpathogen - hypothetical protein sce4993 2 None None None 162451318 Common coxB probable cytochrome c precursor sce3046 65 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 162453718 Common dmpA Aminopeptidase sce5442 43 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162448366 Nonpathogen - hypothetical protein sce0096 5 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 162455367 Nonpathogen - hypothetical protein sce7085 1 None None None 162449396 Common - hypothetical protein sce1126 42 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162455823 Common - similar to chloroplast membrane-associated 30 kD protein sce7541 74 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 162456412 Nonpathogen - putative secreted protein sce8129 1 COG5373 COG5373, Predicted membrane protein Function unknown 162453928 Nonpathogen - putative secreted protein sce5652 1 None None None 162456870 Common - transcriptional regulator, LysR family sce8586 185 COG0583 LysR, Transcriptional regulator Transcription 162448831 Nonpathogen - hypothetical protein sce0561 1 None None None 162453754 Nonpathogen - hypothetical protein sce5478 1 None None None 162449738 Common - putative Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II sce1467 210 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162452735 Common rocA 1-pyrroline-5-carboxylate dehydrogenase sce4459 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162455221 Common rplI 50S ribosomal protein L9 sce6939 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 162448950 Nonpathogen - hypothetical protein sce0680 1 None None None 162451872 Common - probable Transaldolase sce3599 104 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 162448854 Nonpathogen crtC Hydroxyneurosporene dehydrogenase sce0584 11 None None None 162450459 Nonpathogen - hypothetical protein sce2187 1 None None None 162448952 Common - Protein kinase sce0682 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449787 Common - hypothetical protein sce1516 17 None None None 162453694 Common - hypothetical protein sce5418 14 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162451487 Common - hypothetical protein sce3215 52 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162454404 Nonpathogen - hypothetical protein sce6125 1 None None None 162455305 Common - transcriptional regulator, TetR family sce7023 14 None None None 162453098 Common macB hypothetical protein sce4822 193 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 162450452 Nonpathogen - hypothetical protein sce2180 2 None None None 162455024 Common - hypothetical protein sce6742 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162454909 Nonpathogen - hypothetical protein sce6627 1 None None None 162454204 Common moxR2 methanol dehydrogenase regulator (moxR) homolog sce5927 172 COG0714 COG0714, MoxR-like ATPases General function prediction only 162457316 Common - Putative alkyl-dihydroxyacetonephosphate synthase sce9031 170 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162449687 Common - ABC transport system substrate-binding protein sce1416 65 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162451623 Common - Putative beta-ketoacyl synthase sce3351 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449757 Common - ECF-family RNA polymerase sigma factor sce1486 59 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454491 Common - hypothetical protein sce6211 19 None None None 162451729 Common qor2 NADPH:quinone reductase sce3456 180 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162450326 Nonpathogen - hypothetical protein sce2054 1 None None None 162453242 Common - LysR-family transcriptional regulator sce4966 160 COG0583 LysR, Transcriptional regulator Transcription 162457241 Nonpathogen - hypothetical protein sce8956 2 None None None 162449059 Nonpathogen - hypothetical protein sce0789 5 COG0456 RimI, Acetyltransferases General function prediction only 162451340 Common - putative secreted protein sce3068 110 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 162450657 Nonpathogen - hypothetical protein sce2385 4 None None None 162457525 Common - Isovaleryl-CoA dehydrogenase sce9239 160 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162452193 Common - hypothetical protein sce3920 98 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 162457287 Common nitA nitrilase sce9002 47 COG0388 COG0388, Predicted amidohydrolase General function prediction only 162450258 Common - hypothetical protein sce1986 82 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 162450473 Common cheW5 Chemotaxis protein sce2201 122 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 162449440 Common - hypothetical protein sce1170 30 COG1359 COG1359, Uncharacterized conserved protein Function unknown 162456622 Common - conserved hypothetical protein with Kelch motif sce8339 28 None None None 162449873 Common - Protein kinase sce1602 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449441 Nonpathogen - hypothetical protein sce1171 1 None None None 162453939 Common - hypothetical protein sce5663 5 None None None 162451053 Common - GroEL like chaperone, HSP60 family sce2781 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 162450136 Common - ABC transporter ATP-binding protein sce1865 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162455100 Common icd2 isocitrate dehydrogenase sce6818 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 162456783 Common - hypothetical protein sce8500 21 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 162450046 Nonpathogen - hypothetical protein sce1775 4 COG5381 COG5381, Uncharacterized protein conserved in bacteria Function unknown 162456163 Common - transcriptional regulator, TetR family sce7880 24 None None None 162456724 Common - endopeptidase ATPase with chaperone activity,two ATP-bindingdomains sce8441 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162454540 Common - hypothetical protein sce6260 67 COG2013 COG2013, Uncharacterized conserved protein Function unknown 162450734 Common - putative Zn-dependent alcohol dehydrogenases and related dehydrogenases sce2462 15 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162454006 Common ribD2 5-amino-6-(5-phosphoribosylamino)uracil reductase sce5730 174 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 162455147 Nonpathogen - hypothetical protein sce6865 1 None None None 162455928 Common - ABC-type organic solvent transporter, solute-binding periplasmic protein sce7646 46 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 162448434 Common - transcriptional regulator, LysR family sce0164 150 COG0583 LysR, Transcriptional regulator Transcription 162448549 Nonpathogen - hypothetical protein sce0279 1 None None None 162451813 Common - hypothetical protein sce3540 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162455667 Common - undecaprenol glycosyltransferase sce7385 196 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162453203 Common - hypothetical protein sce4927 4 None None None 162451527 Common - hypothetical protein sce3255 30 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 162455283 Nonpathogen - put. Polysaccharide deacetylase sce7001 2 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162450528 Nonpathogen - hypothetical protein sce2256 1 None None None 162449015 Nonpathogen - putative secreted protein sce0745 7 COG3889 COG3889, Predicted solute binding protein General function prediction only 162453018 Common pbp3 penicillin-binding protein sce4742 72 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 162451010 Common tlpA thiol:disulfide interchange protein tlpA sce2738 165 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 162452355 Common - hypothetical protein sce4079 13 COG4677 PemB, Pectin methylesterase Carbohydrate transport and metabolism 162449922 Common queA1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase sce1651 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 162456650 Nonpathogen - hypothetical protein sce8367 1 None None None 162451554 Common ethA monooxygenase, flavin-binding family sce3282 70 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 162448823 Common - transcriptional regulator, AraC family sce0553 52 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162456152 Nonpathogen - hypothetical protein sce7869 1 None None None 162449523 Nonpathogen - hypothetical protein sce1253 1 None None None 162451354 Common - transcriptional regulator, AraC family sce3082 89 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162455899 Common glpK hypothetical protein sce7617 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 162456965 Common ctpA2 C-terminal processing peptidase sce8681 183 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162451925 Nonpathogen - hypothetical protein sce3652 1 None None None 162451992 Common - Nucleotidyl transferase sce3719 48 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 162450020 Common gatA2 hypothetical protein sce1749 220 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162454448 Common - Protein kinase sce6168 65 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451475 Nonpathogen - hypothetical protein sce3203 1 None None None 162453643 Common - BNR repeat domain protein sce5367 47 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162456510 Nonpathogen - putative acyl carrier protein sce8227 1 None None None 162448959 Common - hypothetical protein sce0689 90 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162456303 Nonpathogen - hypothetical protein sce8020 1 COG0392 COG0392, Predicted integral membrane protein Function unknown 162449290 Common - putative nucleotide-binding protein sce1020 6 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162449609 Nonpathogen - hypothetical protein sce1338 1 None None None 162451720 Common galE1 hypothetical protein sce3447 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 162455079 Nonpathogen - hypothetical protein sce6797 1 None None None 162457171 Nonpathogen - hypothetical protein sce8886 1 None None None 162454225 Nonpathogen - hypothetical protein sce5948 1 None None None 162453576 Common - Arsenical pump membrane protein sce5300 122 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 162452479 Nonpathogen - hypothetical protein sce4203 4 None None None 162451904 Nonpathogen - hypothetical protein sce3631 1 None None None 162456013 Common atsA arylsulfatase (aryl-sulfate sulphohydrolase) sce7731 80 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 162450178 Common - methyltransferase sce1907 39 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162452855 Common hypC hydrogenase expression/formation protein sce4579 83 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 162456851 Nonpathogen - hypothetical protein sce8568 1 None None None 162457198 Common cypA9 Cytochrome P450 CYP109C2 sce8913 78 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162451281 Common ispB Trans-octaprenyltranstransferase sce3009 237 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 162450746 Nonpathogen - IMP dehydrogenase/GMP reductase sce2474 1 None None None 162451605 Common yqkF oxidoreductase, aldo/keto reductase family sce3333 197 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162456332 Nonpathogen - hypothetical protein sce8049 1 None None None 162448349 Nonpathogen hemH1 ferrochelatase sce0080 3 None None None 162453960 Nonpathogen - hypothetical protein sce5684 21 COG1604 COG1604, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 162451520 Common - hypothetical protein sce3248 39 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 162455392 Common - hypothetical protein sce7110 23 COG3153 COG3153, Predicted acetyltransferase General function prediction only 162453175 Common - anti-anti sigma factor protein sce4899 75 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162448457 Common - transposase sce0187 11 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162448919 Common tolQ1 putative transport transmembrane protein, tolQ sce0649 141 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 162454633 Common - Response regulator sce6353 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162448278 Nonpathogen - hypothetical protein sce0009 1 None None None 162453827 Common - hypothetical protein sce5551 17 COG5297 CelA, Cellobiohydrolase A (1,4-beta-cellobiosidase A) Carbohydrate transport and metabolism 162456490 Common - Sigma-54 dependent transcriptional regulator sce8207 159 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449988 Common pcnB Poly(A) polymerase sce1717 211 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 162456301 Common - Protein kinase sce8018 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452925 Nonpathogen - hypothetical protein sce4649 1 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 162453290 Common - RNA polymerase sigma factor sce5014 17 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 162454256 Common hppD2 4-hydroxyphenylpyruvate dioxygenase sce5979 73 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 162457078 Common - ECF-family RNA polymerase sigma factor sce8793 20 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457383 Nonpathogen - hypothetical protein sce9098 1 None None None 162448282 Common - hypothetical protein sce0013 35 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162452640 Common - Putative ATP-dependent helicase sce4364 114 COG4581 COG4581, Superfamily II RNA helicase DNA replication, recombination, and repair 162452869 Nonpathogen - hypothetical protein sce4593 1 None None None 162457234 Nonpathogen - hypothetical protein sce8949 2 None None None 162449379 Nonpathogen - predicted integral membrane protein sce1109 1 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 162451930 Nonpathogen - hypothetical protein sce3657 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162453396 Common - Protein kinase sce5120 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454168 Common - outer membrane iron(III) dicitrate receptor sce5892 61 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 162452462 Nonpathogen - hypothetical protein sce4186 1 None None None 162453888 Common - Hydrolase sce5612 190 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162456211 Common - Protein kinase sce7928 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453185 Common - GAF domain protein sce4909 46 COG2203 FhlA, FOG: GAF domain Signal transduction mechanisms 162455407 Nonpathogen - hypothetical protein sce7125 1 None None None 162452027 Nonpathogen - hypothetical protein sce3754 1 None None None 162454547 Nonpathogen - hypothetical protein sce6267 1 None None None 162457641 Nonpathogen - Cellulose synthase 1 operon protein C precursor. sce9355 3 COG0457 NrfG, FOG: TPR repeat General function prediction only 162451194 Common - Protein kinase sce2922 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449086 Nonpathogen - hypothetical protein sce0816 1 None None None 162450694 Common - putative metallopeptidase sce2422 40 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 162453791 Common - hypothetical protein sce5515 35 COG5426 COG5426, Uncharacterized membrane protein Function unknown 162449268 Common - hypothetical protein sce0998 18 COG5297 CelA, Cellobiohydrolase A (1,4-beta-cellobiosidase A) Carbohydrate transport and metabolism 162451596 Common - Transport system permease protein sce3324 136 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162455089 Common dps probable DNA-binding stress protein, Dps family sce6807 137 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 162457186 Common - ECF-family RNA polymerase sigma factor sce8901 72 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448298 Common tal2 hypothetical protein sce0029 158 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 162452440 Common - hypothetical protein sce4164 38 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162449495 Nonpathogen - hypothetical protein sce1225 1 None None None 162453607 Common - Delta(12)-fatty acid dehydrogenase sce5331 20 COG3239 DesA, Fatty acid desaturase Lipid metabolism 162453283 Common - putative Aldehyde dehydrogenase (NAD(+)) sce5007 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162452114 Common - AAA ATPases sce3841 159 COG0714 COG0714, MoxR-like ATPases General function prediction only 162457307 Common def3 peptide deformylase sce9022 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 162449101 Nonpathogen - hypothetical protein sce0831 1 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 162456445 Common - ABC transporter, ATP-binding protein sce8162 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162448876 Nonpathogen - hypothetical protein sce0606 1 None None None 162450430 Common - hypothetical protein sce2158 43 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 162454704 Nonpathogen - pseudogene sce_pseudo_11 1 None None None 162450173 Nonpathogen - hypothetical protein sce1902 1 None None None 162456058 Common - two-component hybrid histidine kinase sce7776 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162457412 Nonpathogen - hypothetical protein sce9126 1 None None None 162451070 Common - Protein kinase sce2798 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452412 Common chiC polyketide synthase sce4136 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162457223 Common - hypothetical protein sce8938 13 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 162454579 Nonpathogen - hypothetical protein sce6299 1 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162456092 Common - Putative regulatory protein sce7810 67 COG1733 COG1733, Predicted transcriptional regulators Transcription 162453472 Nonpathogen - hypothetical protein sce5196 1 None None None 162452000 Common - hypothetical protein sce3727 219 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162453067 Common - ECF-family RNA polymerase sigma factor sce4791 164 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451685 Common - hypothetical protein sce3413 31 COG4339 COG4339, Uncharacterized protein conserved in bacteria Function unknown 162457255 Common gtfE Glycosyl transferase sce8970 34 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 162456134 Common - conserved hypothetical enzyme sce7851 25 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 162457028 Common ndhM2 probable NADH dehydrogenase subunit sce8743 209 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 162450913 Nonpathogen - putative secreted protein sce2641 1 COG4371 COG4371, Predicted membrane protein Function unknown 162451225 Common - histidine kinase sce2953 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162448289 Nonpathogen - hypothetical protein sce0020 1 COG0250 NusG, Transcription antiterminator Transcription 162453468 Common - hypothetical protein sce5192 4 None None None 162452623 Nonpathogen - putative secreted protein sce4347 1 COG5373 COG5373, Predicted membrane protein Function unknown 162455430 Common - hypothetical protein sce7148 34 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 162456696 Nonpathogen - hypothetical protein sce8413 1 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 162452661 Nonpathogen - hypothetical protein sce4385 1 None None None 162448346 Nonpathogen - hypothetical protein sce0077 1 None None None 162454738 Common - hypothetical protein sce6456 116 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162448875 Common - hypothetical protein sce0605 68 COG0457 NrfG, FOG: TPR repeat General function prediction only 162454627 Common - putative mechanosensitive channel protein sce6347 45 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162454873 Common - histone-like protein sce6591 22 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 162452246 Nonpathogen - putative secreted protein sce3973 1 None None None 162454620 Common - hypothetical protein sce6340 9 None None None 162455697 Common murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase sce7415 200 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 162453509 Common - PE_PGRS sce5233 14 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 162456181 Nonpathogen - hypothetical protein sce7898 1 None None None 162455127 Common - transcriptional regulator, AraC family sce6845 8 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454812 Nonpathogen - hypothetical protein sce6530 1 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 162450247 Nonpathogen - hypothetical protein sce1975 2 None None None 162449280 Common - putative acetyltransferase protein sce1010 75 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 162450993 Nonpathogen - hypothetical protein sce2721 1 None None None 162454110 Common - Protein kinase sce5834 227 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450270 Common - Enoyl-CoA hydratase sce1998 167 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162455279 Nonpathogen - hypothetical protein sce6997 1 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 162453030 Common pp2c10 Phosphoprotein phosphatase sce4754 95 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162449528 Common - hypothetical protein sce1259 76 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 162449559 Nonpathogen - hypothetical protein sce1288 1 None None None 162456897 Nonpathogen - putative secreted protein sce8614 1 None None None 162454039 Common - hypothetical protein sce5763 134 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 162455450 Common - hypothetical protein sce7168 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162448738 Common - hypothetical protein sce0468 25 COG5426 COG5426, Uncharacterized membrane protein Function unknown 162448605 Common - ATPase with chaperone activity, two ATP-bindingdomains sce0335 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162453809 Common - Protein kinase sce5533 133 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453847 Common - two-component hybrid sensor and regulator sce5571 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453873 Common - cold shock protein sce5597 22 COG1278 CspC, Cold shock proteins Transcription 162456860 Common phaA pH adaptation potassium efflux protein PhaA sce8577 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 162449465 Nonpathogen - hypothetical protein sce1195 1 COG5108 RPO41, Mitochondrial DNA-directed RNA polymerase Transcription 162448937 Nonpathogen - putative secreted protein sce0667 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162457597 Common - hypothetical protein sce9311 12 None None None 162451702 Common - hypothetical protein sce3430 66 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 162448427 Common - hypothetical protein sce0157 16 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 162455561 Nonpathogen - hypothetical protein sce7279 1 None None None 162449587 Nonpathogen - hypothetical protein sce1316 1 None None None 162449730 Common - MutS-like mismatch repair protein, ATPases sce1459 164 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 162455731 Nonpathogen - putative secreted protein sce7449 2 None None None 162451076 Common arcA efflux transporter, RND family, MFP subunit sce2804 153 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162454186 Common - hypothetical protein sce5909 5 None None None 162453047 Common - alpha/beta hydrolase fold sce4771 72 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162454883 Common - putative WD-40 repeat protein sce6601 21 COG4249 COG4249, Uncharacterized protein containing caspase domain General function prediction only 162454109 Common - Sigma-54 dependent transcriptional regulator sce5833 167 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449595 Common - ABC transporter ATP-binding protein sce1324 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162453600 Common pilT4 pilT-like protein sce5324 205 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 162456294 Common nfo hypothetical protein sce8011 104 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 162457545 Nonpathogen - putative secreted protein sce9259 2 None None None 162456966 Nonpathogen - hypothetical protein sce8682 1 COG3075 GlpB, Anaerobic glycerol-3-phosphate dehydrogenase Amino acid transport and metabolism 162455890 Common - hypothetical protein sce7608 25 COG1874 LacA, Beta-galactosidase Carbohydrate transport and metabolism 162449855 Nonpathogen - hypothetical protein sce1584 1 None None None 162451292 Nonpathogen - hypothetical protein sce3020 1 None None None 162448540 Nonpathogen - hypothetical protein sce0270 7 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 162448688 Nonpathogen - hypothetical protein sce0418 1 None None None 162451376 Nonpathogen - hypothetical protein sce3104 1 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162454848 Nonpathogen - hypothetical protein sce6566 1 COG0456 RimI, Acetyltransferases General function prediction only 162455645 Nonpathogen - hypothetical protein sce7363 1 None None None 162456047 Common - probable dehydrogenase/reductase oxidoreductase protein sce7765 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162456076 Common - hypothetical protein sce7794 69 COG0714 COG0714, MoxR-like ATPases General function prediction only 162450101 Common - hypothetical protein sce1830 100 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 162454014 Common - hypothetical protein sce5738 10 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 162453058 Common mpg putative sugar-phosphate nucleotide transferase sce4782 227 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 162457088 Nonpathogen - nicotianamine synthase, putative sce8803 2 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 162456959 Common polA2 DNA polymerase I sce8676 210 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 162453424 Common - hypothetical protein sce5148 24 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 162456466 Common - putative secreted disulfide isomerase sce8183 129 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162455439 Common rtcA RNA 3'-terminal phosphate cyclase sce7157 47 COG0430 RCL1, RNA 3'-terminal phosphate cyclase RNA processing and modification 162454937 Common - Protein kinase sce6655 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452555 Nonpathogen - hypothetical protein sce4279 2 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162456172 Common sun Sun protein sce7889 169 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 162448542 Common - hypothetical protein sce0271 4 None None None 162455966 Common - hypothetical protein sce7684 7 None None None 162452838 Nonpathogen - hypothetical protein sce4562 1 None None None 162455503 Common - ECF-family RNA polymerase sigma factor sce7221 170 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453457 Common - Probable 3-carboxymuconate cyclase sce5181 11 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 162456935 Nonpathogen - hypothetical protein sce8652 1 None None None 162455312 Nonpathogen - putative secreted protein sce7030 1 None None None 162454129 Common fadD3 AMP-dependent synthetase and ligase sce5853 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162455055 Common - hypothetical protein sce6773 74 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162454041 Common ptsH Phosphocarrier protein HPr sce5765 144 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 162449232 Common - two-component sensor histidine kinase sce0962 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162448293 Common - hypothetical protein sce0024 130 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 162452525 Nonpathogen - putative membrane protein involved in thiamine biosynthesis sce4249 1 None None None 162451888 Common - hypothetical protein sce3615 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 162454100 Common - TonB-dependent receptor, putative sce5824 24 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 162450874 Common fabG5 3-oxoacyl-[acyl-carrier-protein] reductase sce2602 231 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162457142 Nonpathogen - hypothetical protein sce8857 1 None None None 162449901 Common - hypothetical protein sce1630 43 COG4805 COG4805, Uncharacterized protein conserved in bacteria Function unknown 162453488 Nonpathogen - hypothetical protein sce5212 2 None None None 162456394 Nonpathogen - hypothetical protein sce8111 1 None None None 162455568 Common - put. Polysaccharide deacetylase sce7286 57 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162448627 Common - hypothetical protein sce0357 147 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 162455704 Common - hypothetical protein sce7422 26 None None None 162453970 Common mukB cell division protein sce5694 20 COG3096 MukB, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 162449392 Nonpathogen - hypothetical protein sce1122 1 None None None 162456137 Common - Protein kinase sce7854 138 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453420 Nonpathogen - hypothetical protein sce5144 3 None None None 162454264 Nonpathogen - hypothetical protein sce5987 1 None None None 162454902 Nonpathogen - hypothetical protein sce6620 1 None None None 162456571 Common purB hypothetical protein sce8288 236 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 162449178 Common - hypothetical protein sce0908 12 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162455140 Common - hypothetical protein sce6858 36 COG3903 COG3903, Predicted ATPase General function prediction only 162455939 Nonpathogen - hypothetical protein sce7657 4 None None None 162449657 Common nodL Galactoside O-acetyltransferase sce1386 206 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 162452033 Common galE3 UDP-glucose 4-epimerase sce3760 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162450227 Common - hypothetical protein sce1955 32 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162456250 Common pbp4 penicillin-binding protein sce7967 163 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 162452812 Nonpathogen - hypothetical protein sce4536 5 None None None 162451186 Common - hypothetical protein sce2914 4 None None None 162450843 Common uvrA1 excinuclease ABC subunit A sce2571 241 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 162450092 Common - hypothetical protein sce1821 52 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162454443 Nonpathogen - putative secreted protein sce6163 1 None None None 162454978 Nonpathogen - hypothetical secreted protein sce6696 5 None None None 162457543 Nonpathogen - hypothetical protein sce9257 1 None None None 162456905 Common ptsP phosphoenolpyruvate-protein phosphotransferase sce8622 91 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 162452341 Nonpathogen - hypothetical protein sce4065 1 None None None 162453730 Nonpathogen - hypothetical protein sce5454 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162452107 Common - hypothetical protein sce3834 188 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162456358 Nonpathogen - hypothetical protein sce8075 1 None None None 162456842 Common bglA4 Beta-glucosidase sce8559 109 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 162455199 Nonpathogen - hypothetical protein sce6917 1 COG4907 COG4907, Predicted membrane protein Function unknown 162448986 Common - hypothetical protein sce0716 197 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162454230 Common - probable anion transporter ATPase sce5953 14 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 162457357 Common - conserved hypothetical protein (YcaO-like family) sce9072 45 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162448418 Nonpathogen - hypothetical protein sce0148 4 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 162452500 Common nuoE NADH dehydrogenase (ubiquinone) sce4224 156 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 162452543 Nonpathogen - hypothetical protein sce4267 1 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 162453765 Common - hypothetical protein sce5489 6 COG1572 COG1572, Uncharacterized conserved protein Function unknown 162449399 Common - transcriptional regulator, ArsR family sce1129 30 COG0640 ArsR, Predicted transcriptional regulators Transcription 162450448 Common - transcriptional regulator, LysR family sce2176 97 COG0583 LysR, Transcriptional regulator Transcription 162456703 Common - hypothetical protein sce8420 22 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162449028 Common ptlR Regulatory protein pocR. sce0758 78 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162452714 Common - hypothetical protein sce4438 46 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 162455812 Common - hypothetical protein sce7530 56 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455519 Common - hypothetical protein sce7237 4 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 162456678 Nonpathogen - hypothetical protein sce8395 3 None None None 162452951 Nonpathogen - hypothetical protein sce4675 1 None None None 162452816 Common pyk hypothetical protein sce4540 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 162449218 Nonpathogen - hypothetical protein sce0948 5 None None None 162448716 Common pyrE putative orotate phosphoribosyltransferase sce0446 203 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 162453904 Nonpathogen - hypothetical protein sce5628 1 None None None 162449818 Common - N-acyl-D-amino-acid deacylase sce1547 51 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 162451134 Common argJ Glutamate N-acetyltransferase sce2862 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 162454239 Common pcnA putative polynucleotide polymerase sce5962 63 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 162456486 Common - putative 5-methylcytosine-specific restriction enzyme B sce8203 51 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 162452161 Common mxcG nonribosomal peptide synthetase sce3888 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162451748 Common - hypothetical protein sce3475 32 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 162452443 Common sodB hypothetical protein sce4167 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 162450594 Nonpathogen - hypothetical protein sce2322 1 COG5439 COG5439, Uncharacterized conserved protein Function unknown 162455961 Nonpathogen - hypothetical protein sce7679 1 None None None 162449840 Common pdhC Dihydrolipoyllysine-residue acetyltransferase sce1569 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 162450191 Common - possible carboxylesterase sce1919 9 COG2267 PldB, Lysophospholipase Lipid metabolism 162454769 Common - DNA repair protein sce6487 171 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 162449437 Common - putative Methyltransferase sce1167 34 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 162453496 Nonpathogen - hypothetical protein sce5220 1 None None None 162453918 Common - putative zinc-binding oxidoreductase sce5642 173 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162451200 Nonpathogen - hypothetical protein sce2928 1 None None None 162451496 Common - hypothetical protein sce3224 105 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 162450339 Nonpathogen - putative secreted protein sce2067 2 None None None 162452046 Common - phosphoesterase sce3773 33 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 162449530 Common - two-component hybrid sensor and regulator sce1260 226 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162456144 Nonpathogen - hypothetical protein sce7861 4 None None None 162453998 Common - hypothetical endo-1,4-beta-glucanase sce5722 14 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162453596 Common cysS2 hypothetical protein sce5320 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162455272 Common - hypothetical protein sce6990 6 COG4927 COG4927, Predicted choloylglycine hydrolase General function prediction only 162457069 Common - Protein kinase sce8784 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453861 Common - hypothetical protein sce5585 4 None None None 162457266 Common - oxidoreductase sce8981 202 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162456639 Common - hypothetical protein sce8356 19 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162453382 Nonpathogen - hypothetical protein sce5106 1 None None None 162452168 Common - hypothetical protein sce3895 16 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 162449115 Common rplB 50S ribosomal protein L2 sce0845 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 162453624 Common - hypothetical protein sce5348 9 None None None 162451895 Common - hypothetical protein sce3622 48 COG1159 Era, GTPase General function prediction only 162455721 Nonpathogen - hypothetical protein sce7439 3 None None None 162450309 Common oppB1 ABC transport protein inner membrane component sce2037 171 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162456083 Common - sigma-54 dependent DNA-binding response regulator sce7801 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455173 Nonpathogen - hypothetical protein sce6891 1 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 162455247 Nonpathogen - hypothetical protein sce6965 1 None None None 162449665 Common - hypothetical protein sce1394 7 COG1714 COG1714, Predicted membrane protein/domain Function unknown 162456806 Common - protein kinase sce8523 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456927 Common - sensor histidine kinase sce8644 218 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162452007 Common - 2-isopropylmalate synthase sce3734 210 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 162452984 Nonpathogen - hypothetical protein sce4708 1 None None None 162452747 Common oprF outer membrane protein sce4471 172 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162455435 Nonpathogen - hypothetical protein sce7153 1 None None None 162456711 Common - hypothetical protein sce8428 33 COG3287 COG3287, Uncharacterized conserved protein Function unknown 162448886 Common cysS1 hypothetical protein sce0616 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162448999 Common - probable reverse transcriptase/maturase family protein sce0729 92 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 162457174 Nonpathogen - hypothetical protein sce8889 1 None None None 162448579 Common - putative hydrolase sce0309 67 COG2267 PldB, Lysophospholipase Lipid metabolism 162449852 Nonpathogen - hypothetical protein sce1581 8 None None None 162456751 Nonpathogen - hypothetical protein sce8468 1 None None None 162457366 Nonpathogen - hypothetical protein sce9081 1 None None None 162452065 Nonpathogen - Mucin and cadherin-like protein precursor sce3792 1 COG5373 COG5373, Predicted membrane protein Function unknown 162449571 Common - glycosyltransferase sce1300 137 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162456065 Common - hypothetical protein sce7783 5 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 162457651 Nonpathogen - hypothetical protein sce9365 1 None None None 162451655 Common - hypothetical protein sce3383 147 COG1741 COG1741, Pirin-related protein General function prediction only 162451434 Nonpathogen - hypothetical protein sce3162 1 None None None 162450386 Common katE hypothetical protein sce2114 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 162454068 Common - hypothetical protein sce5792 168 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162457311 Common rpmE 50S ribosomal protein L31 sce9026 175 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 162449974 Nonpathogen - hypothetical protein sce1703 1 None None None 162453725 Nonpathogen - hypothetical protein sce5449 1 None None None 162452887 Common - hypothetical protein sce4611 7 None None None 162456665 Nonpathogen - hypothetical protein sce8382 1 None None None 162449425 Nonpathogen - hypothetical protein sce1155 1 None None None 162455785 Nonpathogen - Bipartite response regulator related protein sce7503 1 None None None 162456758 Nonpathogen - hypothetical protein sce8475 1 None None None 162450035 Common - FHA and GGDEF domain protein sce1764 189 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 162448905 Nonpathogen - putative secreted protein sce0635 2 None None None 162455164 Common - HIT family protein sce6882 112 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 162449679 Common - Protein kinase sce1408 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449815 Nonpathogen - hypothetical protein sce1543 1 None None None 162456697 Common - hypothetical protein sce8414 9 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 162452902 Common cpo Chloride peroxidase sce4626 19 None None None 162449372 Common trpB hypothetical protein sce1102 226 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 162452323 Nonpathogen - Integrin alpha-V precursor sce4049 15 None None None 162454247 Common - hypothetical protein sce5970 56 COG2267 PldB, Lysophospholipase Lipid metabolism 162457632 Common - hypothetical protein sce9346 43 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 162455324 Nonpathogen - hypothetical protein sce7042 3 None None None 162454585 Nonpathogen - hypothetical protein sce6305 1 None None None 162454942 Nonpathogen - hypothetical protein sce6660 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162455197 Common - hypothetical protein sce6915 7 None None None 162450369 Nonpathogen - hypothetical protein sce2097 10 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 162454984 Common - hypothetical protein sce6702 20 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162453652 Common - similar to serine protease inhibitor sce5376 29 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162452974 Nonpathogen - hypothetical protein sce4698 4 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 162449359 Common - Protein kinase sce1089 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451414 Common - TPR repeat sce3142 59 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162451262 Common - hypothetical protein sce2990 139 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162451467 Common - malonyl CoA-acyl carrier protein transacylase sce3195 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 162453977 Nonpathogen - hypothetical protein sce5701 9 None None None 162449714 Common - hypothetical membrane channel protein sce1443 169 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162457167 Nonpathogen - hypothetical protein sce8882 1 None None None 162448428 Common - hypothetical protein sce0158 2 None None None 162451504 Nonpathogen - hypothetical protein sce3232 1 None None None 162457468 Nonpathogen - hypothetical protein sce9182 1 None None None 162457249 Common - hypothetical protein sce8964 138 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 162449670 Common - hypothetical protein sce1399 107 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162449515 Common - Altronate dehydratase sce1245 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 162454672 Common - Protein kinase sce6392 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456454 Nonpathogen - hypothetical protein sce8171 1 None None None 162450671 Common carA1 Carbamoyl-phosphate synthase sce2399 230 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 162449790 Nonpathogen - hypothetical protein sce1519 1 None None None 162451649 Common - ABC transport system ATP-binding protein sce3377 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162448336 Common - transcriptional regulator, TetR family sce0067 120 COG1309 AcrR, Transcriptional regulator Transcription 162454716 Nonpathogen - hypothetical protein sce6434 1 None None None 162452695 Common - similar to transcription negative regulator ChrR sce4419 31 COG3806 ChrR, Transcriptional activator Transcription 162454173 Common - hypothetical protein sce5897 114 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 162455411 Common - Protein kinase sce7129 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451163 Common kamE Beta-lysine 5,6-aminomutase, beta subunit sce2891 21 COG5012 COG5012, Predicted cobalamin binding protein General function prediction only 162454512 Nonpathogen - hypothetical protein sce6232 1 None None None 162452085 Common - hypothetical protein sce3812 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 162453135 Common - transcriptional regulator, TetR family sce4859 60 COG1309 AcrR, Transcriptional regulator Transcription 162451117 Common - transposase, IS4 family sce2845 27 None None None 162455852 Common - Folic acid synthesis protein sce7570 200 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 162450059 Nonpathogen - hypothetical protein sce1788 1 None None None 162453133 Common - hypothetical protein sce4857 45 COG3686 COG3686, Predicted membrane protein Function unknown 162449222 Nonpathogen - hypothetical protein sce0952 1 None None None 162450086 Nonpathogen - hypothetical protein sce1815 3 None None None 162455211 Common dsbD thiol:disulfide interchange protein DsbD sce6929 175 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 162457282 Common - hypothetical protein sce8997 16 None None None 162453328 Common - Protein kinase sce5052 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449697 Common - hypothetical protein sce1426 2 None None None 162455825 Common ppdK Pyruvate, phosphate dikinase sce7543 230 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162452723 Common rpoD RNA polymerase sigma factor RpoD sce4447 217 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162451087 Common - Protein kinase sce2815 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452737 Nonpathogen - hypothetical protein sce4461 3 None None None 162452072 Common - Protein kinase sce3799 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454303 Nonpathogen - hypothetical protein sce6026 1 None None None 162452337 Nonpathogen - pseudogene sce_pseudo_05 5 COG1948 MUS81, ERCC4-type nuclease DNA replication, recombination, and repair 162448583 Common - hypothetical protein sce0313 62 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162451564 Common - Probable Acyl-CoA carboxylase sce3292 147 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 162456495 Common strE dTDP-glucose 4,6-dehydratase sce8212 28 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162451459 Common asnB1 asparagine synthetase sce3187 169 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 162453295 Nonpathogen - hypothetical protein sce5019 1 None None None 162454965 Nonpathogen wzx3 oligosaccharyltransferase involved in polysaccharide biosynthesis sce6683 2 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 162455776 Common - permease of the major facilitator superfamily sce7494 6 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162455332 Common - Protein kinase sce7050 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456632 Common - glycosyltransferase sce8349 4 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162448568 Nonpathogen - hypothetical protein sce0298 1 None None None 162455737 Common - hypothetical protein sce7455 50 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162455240 Common oxyR activator, hydrogen peroxide-inducible genes sce6958 185 COG0583 LysR, Transcriptional regulator Transcription 162455742 Common - conserved carbohydrate-binding protein, Rhs family sce7460 65 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162453636 Common - hypothetical protein sce5360 22 COG4676 COG4676, Uncharacterized protein conserved in bacteria Function unknown 162457295 Common - hypothetical protein sce9010 7 None None None 162451323 Nonpathogen - putative secreted protein sce3051 2 None None None 162455877 Common - putative cytochrome c oxidase subunit IV sce7595 11 COG5605 COG5605, Predicted small integral membrane protein Function unknown 162456422 Common - hypothetical protein sce8139 39 None None None 162457017 Common - hypothetical protein sce8732 11 None None None 162454051 Common - hypothetical protein sce5775 3 COG2105 COG2105, Uncharacterized conserved protein Function unknown 162448975 Common - anti-anti sigma factor protein sce0705 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162450293 Nonpathogen - hypothetical protein sce2021 1 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 162453233 Common torS hypothetical protein sce4957 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162448926 Common thiD Phosphomethylpyrimidine kinase sce0656 215 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 162449739 Common celA hypothetical protein sce1468 17 COG2730 BglC, Endoglucanase Carbohydrate transport and metabolism 162452560 Common - putative 1-acyl-sn-glycerol-3-phosphate acyltransferase sce4284 37 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162456883 Nonpathogen - permease sce8600 1 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 162448515 Common cbiX sirohydrochlorin cobaltochelatase sce0245 103 COG2138 COG2138, Uncharacterized conserved protein Function unknown 162453684 Common - hypothetical protein sce5408 6 None None None 162455749 Common - Na+/H+|K+/H+antiporter sce7467 72 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 162455853 Nonpathogen - hypothetical protein sce7571 1 None None None 162454558 Nonpathogen - hypothetical protein sce6278 1 None None None 162454219 Nonpathogen - hypothetical protein sce5942 1 None None None 162453796 Common - probable type I restriction-modification system,M subunit sce5520 155 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 162456257 Common - putative exported peptidase sce7974 167 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 162455488 Common - regulator protein, FUR family sce7206 65 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 162449350 Nonpathogen - hypothetical protein sce1080 1 None None None 162449421 Common - hypothetical protein sce1151 4 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162454652 Common - putative AraC-family transcriptional regulator sce6372 137 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162454070 Common - glycosyltransferase sce5794 108 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162451757 Nonpathogen - hypothetical protein sce3484 1 None None None 162455540 Common - putative DNA-directed RNA polymerase, omega subunit sce7258 111 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 162451451 Common - putative polyketide biosynthesis enoyl-coa hydratase sce3179 67 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162457484 Common - Sigma-54 dependent transcriptional regulator sce9198 178 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454076 Common nusA N utilization substance protein A sce5800 216 COG0195 NusA, Transcription elongation factor Transcription 162449490 Common - similar to Xaa-His dipeptidase sce1220 12 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 162456260 Nonpathogen - hypothetical protein sce7977 3 None None None 162456918 Nonpathogen - hypothetical protein sce8635 1 None None None 162450234 Common - hypothetical protein sce1962 3 None None None 162451791 Common - hypothetical protein sce3518 31 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162451950 Nonpathogen - hypothetical protein sce3677 1 None None None 162451218 Common pstS phosphate ABC transporter, substrate-binding protein PstS sce2946 119 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 162454486 Common - Glutamate/leucine/phenylalanine/valine dehydrogenase sce6206 144 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 162456194 Common - hypothetical protein sce7911 4 None None None 162455864 Common - Aldo-keto reductase family 1 sce7582 182 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162448494 Common - Protein kinase sce0224 151 COG3899 COG3899, Predicted ATPase General function prediction only 162452221 Nonpathogen - polysaccharide biosynthesis protein, putative sce3948 8 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 162457379 Common - hypothetical protein sce9094 45 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 162448681 Common rpoC DNA-directed RNA polymerase, beta' subunit sce0411 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 162449537 Common - serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member sce1266 30 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162454159 Common - hypothetical protein sce5883 56 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 162452482 Common - Diphosphomevalonate decarboxylase sce4206 26 COG3407 MVD1, Mevalonate pyrophosphate decarboxylase Lipid metabolism 162452726 Common - probable surface antigen sce4450 158 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 162450123 Nonpathogen - hypothetical protein sce1852 1 None None None 162449053 Nonpathogen - hypothetical protein sce0783 2 None None None 162448593 Common ndh1 NADH dehydrogenase sce0323 204 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 162451367 Common - putative aldehyde dehydrogenase sce3095 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162453118 Common aroB2 3-dehydroquinate synthase sce4842 208 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 162457289 Common pacI ribonuclease R sce9004 192 COG0557 VacB, Exoribonuclease R Transcription 162454275 Common - hypothetical protein sce5998 35 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 162452366 Common - hypothetical protein sce4090 51 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 162454941 Common - ECF-family RNA polymerase sigma factor sce6659 4 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162449347 Common - hypothetical protein sce1077 33 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 162455836 Common - Thiolase sce7554 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 162450946 Common - hypothetical protein sce2674 11 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162456529 Common - CobW/P47K family probable sce8246 128 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 162457477 Nonpathogen - hypothetical protein sce9191 1 None None None 162452995 Nonpathogen - hypothetical protein sce4719 1 None None None 162455767 Common - hypothetical protein sce7485 79 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162448585 Nonpathogen - hypothetical protein sce0315 1 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 162450267 Common - acyl-CoA synthetase sce1995 220 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162451153 Common - sigma-54 dependent DNA-binding response regulator sce2881 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454915 Nonpathogen - proline-rich family protein sce6633 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162457409 Common - putative oxidoreductase sce9123 39 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 162453612 Common - alpha/beta hydrolase fold protein sce5336 112 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162453816 Nonpathogen - hypothetical protein sce5540 1 None None None 162455869 Common - hypothetical protein sce7587 22 None None None 162450158 Nonpathogen - hypothetical protein sce1887 1 COG4907 COG4907, Predicted membrane protein Function unknown 162454924 Common - sigma-54 dependent transcriptional regulator sce6642 171 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162448532 Common - hypothetical protein sce0262 8 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 162453946 Common sucA Oxoglutarate dehydrogenase (succinyl-transferring) sce5670 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 162449458 Common - Glutathione transferase sce1188 37 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448402 Common pflA1 Pyruvate formate lyase activating enzyme sce0132 44 COG1313 PflX, Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins General function prediction only 162457507 Common gspC2 general secretion pathway protein C fragment sce9221 12 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 162449602 Common - putative zinc protease sce1331 183 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162449884 Nonpathogen - hypothetical protein sce1613 1 None None None 162452348 Nonpathogen - hypothetical protein sce4072 1 None None None 162452915 Nonpathogen - hypothetical protein sce4639 1 None None None 162451697 Common pit2 probable low-affinity inorganic phosphate transporter sce3425 164 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 162452826 Common - permease of the major facilitator superfamily sce4550 43 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 162454494 Nonpathogen - hypothetical protein sce6214 1 None None None 162455426 Common - transposase sce7144 10 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 162449589 Nonpathogen - putative secreted protein sce1318 1 None None None 162456519 Common gnl2 hypothetical protein sce8236 74 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162457071 Nonpathogen - putative secreted protein sce8786 1 None None None 162457211 Nonpathogen - hypothetical protein sce8926 5 None None None 162449050 Nonpathogen - hypothetical protein sce0780 1 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162457330 Common - hypothetical protein sce9045 7 None None None 162451470 Nonpathogen - hypothetical protein sce3198 1 None None None 162450346 Nonpathogen - hypothetical protein sce2074 1 None None None 162451270 Common - hypothetical protein sce2998 82 COG2379 GckA, Putative glycerate kinase Carbohydrate transport and metabolism 162454343 Nonpathogen - hypothetical protein sce6066 1 None None None 162456590 Common sdhC2 Succinate dehydrogenase sce8307 15 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 162455348 Nonpathogen - hypothetical protein sce7066 2 None None None 162452064 Nonpathogen - Hypothetical protein K08D12.6 sce3791 1 COG5243 HRD1, HRD ubiquitin ligase complex, ER membrane component Posttranslational modification, protein turnover, chaperones 162450754 Common - glycosyltransferase sce2482 77 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 162450788 Common - FHA domain protein sce2516 10 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162456288 Common - hypothetical protein sce8005 116 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 162457615 Common - hypothetical protein sce9329 64 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162448373 Common - hypothetical protein sce0103 10 None None None 162457370 Nonpathogen - hypothetical protein sce9085 3 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451993 Common - Protein kinase sce3720 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453346 Common tolR5 tolR protein sce5070 20 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162455005 Nonpathogen - hypothetical protein sce6723 1 None None None 162453432 Common exuT permease of the major facilitator superfamily,probably glucarate/galactonate transport sce5156 197 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 162457627 Common - hypothetical protein sce9341 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 162452174 Common - prolipoprotein diacylglyceryl transferase sce3901 179 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 162451150 Nonpathogen - putative secreted protein sce2878 1 None None None 162449156 Common - NDP-sugar oxidoreductase sce0886 194 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162452274 Common - hypothetical protein sce4001 20 None None None 162456942 Common - hypothetical protein sce8659 85 COG1295 Rbn, Predicted membrane protein Function unknown 162449760 Common - probable lysophospholipase L1 and related esterases/probable similar to rhamnogalacturonan acetylesterase sce1489 16 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162455599 Nonpathogen - hypothetical protein sce7317 6 COG4907 COG4907, Predicted membrane protein Function unknown 162456685 Common - sensor histidine kinase sce8402 191 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162454786 Common - hypothetical protein sce6504 74 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 162451768 Nonpathogen - hypothetical protein sce3495 1 None None None 162453500 Nonpathogen - hypothetical protein sce5224 1 None None None 162455402 Common - WD-repeat protein sce7120 56 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162452704 Common - N-formylglutamate amidohydrolase sce4428 59 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 162454507 Nonpathogen - hypothetical protein sce6227 1 None None None 162452452 Common - Protein kinase sce4176 138 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456764 Common - Putative 2-isopropylmalate synthase sce8481 170 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 162454133 Nonpathogen - hypothetical protein sce5857 1 None None None 162448811 Common - hypothetical protein sce0541 25 COG3482 COG3482, Uncharacterized conserved protein Function unknown 162452666 Common - ATPase with chaperone activity, two ATP-bindingdomains sce4390 223 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162452897 Common - hypothetical protein sce4621 65 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 162449699 Nonpathogen - hypothetical protein sce1428 1 None None None 162451446 Common - hypothetical protein sce3174 15 None None None 162451886 Common rsbR2 positive regulator of sigma-B activity sce3613 43 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454210 Nonpathogen - hypothetical protein sce5933 1 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162454414 Nonpathogen - transposase sce6135 1 None None None 162455535 Common rimI2 Ribosomal-protein-alanine N-acetyltransferase sce7253 188 COG0456 RimI, Acetyltransferases General function prediction only 162448928 Nonpathogen - hypothetical protein sce0658 1 None None None 162450511 Common clpP1 Endopeptidase Clp sce2239 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162453825 Common - Probable ferredoxin/ferredoxin--NADP reductase sce5549 119 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 162456589 Nonpathogen - hypothetical protein sce8306 1 None None None 162451518 Nonpathogen - hypothetical protein sce3246 3 None None None 162451808 Nonpathogen - hypothetical protein sce3535 1 None None None 162451675 Common - transposase sce3403 80 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455577 Common - Protein kinase sce7295 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450265 Common - hypothetical protein sce1993 25 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162453631 Common - hypothetical protein containing GAF domain sce5355 65 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 162450406 Common - put. oxidoreductase; aldo-keto family sce2134 198 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162455265 Common - transposase sce6983 17 None None None 162457557 Nonpathogen - hypothetical protein sce9271 1 None None None 162450381 Nonpathogen - hypothetical protein sce2109 1 None None None 162451877 Nonpathogen - hypothetical protein sce3604 1 None None None 162450120 Nonpathogen - putative secreted protein sce1849 1 None None None 162449503 Common ushA puitative 5'-nucleotidase family protein sce1233 124 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 162451775 Common - truncated anti-anti sigma factor protein sce3502 21 None None None 162451257 Common - putative Succinate-semialdehyde dehydrogenase (NAD(P)(+)) sce2985 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162453195 Common ssuA aliphatic sulfonate ABC transporter, substrate-binding protein sce4919 102 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162456003 Common - Protein kinase sce7721 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451147 Nonpathogen - phosphatidylinositol transfer protein, membrane-associated sce2875 3 COG5083 SMP2, Uncharacterized protein involved in plasmid maintenance General function prediction only 162452407 Nonpathogen - hypothetical protein sce4131 2 None None None 162451955 Nonpathogen - hypothetical protein sce3682 1 None None None 162448690 Common - hypothetical protein sce0420 2 None None None 162454021 Common - transcriptional regulator sce5745 221 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162452248 Nonpathogen - hypothetical protein sce3975 1 None None None 162452288 Common - hypothetical protein sce4015 22 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162456612 Common - FHA domain protein sce8329 7 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162455254 Common - Acyl-CoA dehydrogenase sce6972 135 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162455096 Common - conserved hypothetical protein similar to glycosyltransferases sce6814 26 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162457327 Common - hypothetical protein sce9042 72 COG1926 COG1926, Predicted phosphoribosyltransferases General function prediction only 162450239 Common - hypothetical protein sce1967 38 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 162452676 Common - putative agmatinase sce4400 150 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 162450925 Common - two-component system sensor histidine kinase/response regulator, hybrid sce2653 224 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 162449746 Nonpathogen - hypothetical protein sce1475 1 None None None 162454028 Common - hypothetical protein sce5752 4 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 162456816 Common - putative secreted protein sce8533 13 None None None 162449532 Nonpathogen - hypothetical protein sce1261 1 COG5373 COG5373, Predicted membrane protein Function unknown 162455590 Common - sugar nucleotidyltransferase sce7308 35 COG1213 COG1213, Predicted sugar nucleotidyltransferases Cell envelope biogenesis, outer membrane 162453326 Common - putative DNA mismatch repair protein sce5049 199 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 162448272 Common dnaK1 dnaK protein sce0003 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162452892 Nonpathogen - hypothetical protein sce4616 1 None None None 162456063 Common hat WD-40 repeat protein sce7781 62 COG2319 COG2319, FOG: WD40 repeat General function prediction only 162452515 Nonpathogen - hypothetical protein sce4239 1 None None None 162456644 Nonpathogen - hypothetical protein sce8361 1 None None None 162453925 Common ppa vacuolar-type H+-pyrophosphatase sce5649 98 COG3808 OVP1, Inorganic pyrophosphatase Energy production and conversion 162450491 Nonpathogen - hypothetical protein sce2219 1 None None None 162455043 Common - hypothetical protein sce6761 95 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162457361 Common - hypothetical protein sce9076 19 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162454742 Common cbpA hypothetical protein sce6460 44 COG3459 COG3459, Cellobiose phosphorylase Carbohydrate transport and metabolism 162453696 Common - putative glycine-rich protein sce5420 7 None None None 162451894 Common - Protein kinase sce3621 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453124 Common ribA2 hypothetical protein sce4848 194 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 162453864 Common - Protein kinase sce5588 123 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456876 Common - probable outer membrane protein sce8593 119 COG1360 MotB, Flagellar motor protein Cell motility and secretion 162449044 Common gdhB Quinoprotein glucose dehydrogenase sce0774 115 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 162448492 Nonpathogen - hypothetical protein sce0222 3 None None None 162457574 Nonpathogen - hypothetical protein sce9288 1 None None None 162448479 Nonpathogen - hypothetical protein sce0209 1 None None None 162451404 Nonpathogen - hypothetical protein sce3131 3 None None None 162456654 Nonpathogen - hypothetical protein sce8371 1 None None None 162453211 Common - predicted N-formylglutamate amidohydrolase sce4935 45 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 162455335 Common - acyl-CoA synthetase sce7053 221 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162454373 Common - hypothetical protein sce6096 22 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 162451935 Common - hypothetical protein sce3662 2 None None None 162453626 Common - putative secreted protein sce5350 2 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162453770 Nonpathogen - hypothetical protein sce5494 1 COG5637 COG5637, Predicted integral membrane protein Function unknown 162449617 Common - Hybrid histidine kinase sce1346 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162457560 Nonpathogen - ECF-family RNA polymerase sigma factor sce9274 3 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450148 Nonpathogen - hypothetical protein sce1877 1 None None None 162454194 Nonpathogen - hypothetical protein sce5917 1 None None None 162450541 Common - hypothetical protein sce2269 7 None None None 162450572 Common - SmpB-like protein sce2300 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 162457023 Common - Protein kinase sce8738 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454384 Nonpathogen - transposase sce6107 1 None None None 162454866 Common - putative secreted protein sce6584 3 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162456944 Common - probable oxidoreductase sce8661 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 162449725 Common - put. Galactose mutarotase sce1454 62 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 162452295 Nonpathogen - hypothetical protein sce4021 1 None None None 162454680 Common - hypothetical protein sce6400 199 COG0388 COG0388, Predicted amidohydrolase General function prediction only 162455151 Nonpathogen - hypothetical protein sce6869 1 None None None 162455369 Common - ECF-family RNA polymerase sigma factor sce7087 11 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455016 Nonpathogen - hypothetical protein sce6734 3 None None None 162449394 Common panE1 2-dehydropantoate 2-reductase sce1124 37 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 162448513 Common - hypothetical protein sce0243 7 None None None 162457092 Common - hypothetical protein sce8807 10 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 162450648 Common amt1 ammonium transporter sce2376 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 162449662 Nonpathogen - hypothetical protein sce1391 1 None None None 162454539 Common - hypothetical protein sce6259 76 COG2013 COG2013, Uncharacterized conserved protein Function unknown 162449549 Nonpathogen - hypothetical protein sce1278 1 None None None 162455111 Nonpathogen - hypothetical protein sce6829 2 None None None 162454521 Common - probable lactoylglutathione lyase sce6241 61 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162454747 Nonpathogen - hypothetical protein sce6465 3 None None None 162456473 Nonpathogen - hypothetical protein sce8190 8 None None None 162457495 Nonpathogen - conserved hypothetical protein fragment sce9209 1 None None None 162450519 Common - Sigma-54 dependent transcriptional regulator sce2247 170 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162453127 Common - transcriptional regulator, TetR family sce4851 51 COG1309 AcrR, Transcriptional regulator Transcription 162453658 Common - hypothetical protein sce5382 43 COG2128 COG2128, Uncharacterized conserved protein Function unknown 162452467 Nonpathogen - hypothetical protein sce4191 6 COG0392 COG0392, Predicted integral membrane protein Function unknown 162454760 Common - hypothetical protein sce6478 67 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 162457472 Nonpathogen - hypothetical protein sce9186 1 None None None 162452498 Common nuoJ putative NADH dehydrogenase (ubiquinone) sce4222 24 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 162456509 Common - acyl-CoA-ligase/synthetase sce8226 214 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162453264 Common - hypothetical protein sce4988 5 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 162451250 Nonpathogen - putative secreted protein sce2978 1 None None None 162454341 Nonpathogen - hypothetical protein sce6064 1 None None None 162448727 Nonpathogen - hypothetical protein sce0457 1 None None None 162455801 Common - probable ADP-ribosylglycohydrolase sce7519 2 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 162452519 Nonpathogen - hypothetical protein sce4243 3 None None None 162457158 Nonpathogen - putative secreted protein sce8873 1 None None None 162454686 Nonpathogen - hypothetical protein sce6406 1 None None None 162449971 Nonpathogen - hypothetical protein sce1700 1 None None None 162449561 Nonpathogen - hypothetical protein sce1290 1 None None None 162455387 Common pcaF Putative beta-ketoadipyl CoA thiolase sce7105 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 162449209 Nonpathogen - hypothetical protein sce0939 1 None None None 162449539 Common - transcriptional regulator, GntR family sce1268 170 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 162448862 Nonpathogen - hypothetical protein sce0592 1 None None None 162449912 Common - putative membrane bound zinc metallopeptidase sce1641 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 162451611 Nonpathogen - hypothetical protein sce3339 1 COG4907 COG4907, Predicted membrane protein Function unknown 162452346 Common - hypothetical protein sce4070 19 COG3868 COG3868, Uncharacterized conserved protein Function unknown 162449867 Common cheW4 hypothetical protein sce1596 130 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 162453225 Common - hypothetical protein sce4949 13 None None None 162453434 Nonpathogen - hypothetical protein sce5158 5 None None None 162451502 Nonpathogen - putative secreted protein sce3230 1 None None None 162451522 Common adh3 Alcohol dehydrogenase sce3250 182 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162451567 Common - hypothetical protein sce3295 116 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 162450550 Common - hypothetical protein sce2278 90 COG0714 COG0714, MoxR-like ATPases General function prediction only 162453165 Common - transcriptional regulator, MarR family sce4889 44 COG1846 MarR, Transcriptional regulators Transcription 162448368 Common - putative Carboxymethylenebutenolidase sce0098 114 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162449560 Nonpathogen - hypothetical protein sce1289 1 None None None 162449680 Nonpathogen - hypothetical protein sce1409 1 None None None 162449037 Common - hypothetical protein/transglutaminase-like enzyme sce0767 11 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162450621 Common - Amidase sce2349 12 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162455615 Common - putative Heat shock protein Hsp70 sce7333 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162453447 Nonpathogen - putative glycine-rich protein sce5171 1 COG5281 COG5281, Phage-related minor tail protein Function unknown 162455118 Common thiJ ThiJ/PfpI family protein sce6836 114 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 162455493 Common glnB nitrogen regulatory protein P-II sce7211 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 162451712 Common - hypothetical protein sce3440 54 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 162451841 Common - hypothetical protein sce3568 3 COG0622 COG0622, Predicted phosphoesterase General function prediction only 162457578 Common - hypothetical protein sce9292 102 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 162451246 Common - sigma-54 dependent DNA-binding response regulator sce2974 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162450479 Nonpathogen - Slit homolog 3 protein precursor (Slit-3) sce2207 4 None None None 162457111 Nonpathogen - hypothetical protein sce8826 2 None None None 162451530 Nonpathogen - hypothetical protein sce3258 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162454532 Common - hypothetical protein sce6252 17 COG4637 COG4637, Predicted ATPase General function prediction only 162449941 Common - hypothetical protein sce1670 16 COG2339 COG2339, Predicted membrane protein Function unknown 162448527 Common recR DNA repair and genetic recombination protein sce0257 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 162450916 Nonpathogen - hypothetical protein sce2644 1 None None None 162454667 Common - putative secreted protein sce6387 11 None None None 162449107 Nonpathogen - hypothetical protein sce0837 1 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 162450700 Nonpathogen - hypothetical protein sce2428 1 None None None 162452939 Common - hypothetical protein sce4663 19 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162452961 Nonpathogen - hypothetical protein sce4685 1 None None None 162452079 Common - hypothetical protein sce3805 26 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 162452142 Common - hypothetical protein sce3869 147 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162456793 Common - putative positive regulator of sigma-B sce8510 36 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454338 Common - putative Kinase sce6061 12 COG4639 COG4639, Predicted kinase General function prediction only 162451537 Common - sensor histidine kinase sce3265 221 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162457350 Nonpathogen - hypothetical protein sce9065 1 None None None 162453618 Common rhaS transcriptional regulator, AraC family sce5342 54 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162453524 Nonpathogen - hypothetical protein sce5248 6 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162448783 Common - possible Disulfide bond formation protein D precursor sce0513 98 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 162452491 Common hisC2 Histidinol-phosphate aminotransferase sce4215 227 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 162451028 Common - hypothetical protein sce2756 47 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 162449847 Common fabG2 3-oxoacyl-[acyl-carrier-protein] reductase sce1576 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162449234 Common - hypothetical protein sce0964 6 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 162454801 Common - putative tRNA processing ribonuclease BN sce6519 58 COG1295 Rbn, Predicted membrane protein Function unknown 162449308 Common - glycosyltransferase sce1038 163 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162457508 Common - sigma-54 dependent DNA-binding response regulator sce9222 227 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449187 Nonpathogen - hypothetical protein sce0917 2 None None None 162456744 Common - hypothetical protein sce8461 84 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162457260 Common - hypothetical protein sce8975 21 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 162457373 Nonpathogen - hypothetical protein sce9088 1 None None None 162454505 Nonpathogen - hypothetical protein sce6225 5 COG3940 COG3940, Predicted beta-xylosidase General function prediction only 162449860 Nonpathogen - hypothetical protein sce1589 1 None None None 162451586 Nonpathogen - putative secreted protein sce3314 4 COG4371 COG4371, Predicted membrane protein Function unknown 162448753 Nonpathogen - hypothetical protein sce0483 1 None None None 162450625 Common - anti-anti sigma factor protein sce2353 41 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162453244 Nonpathogen - hypothetical protein sce4968 1 None None None 162451120 Common - hypothetical protein sce2848 176 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162456531 Common mdtA2 Multidrug resistance protein sce8248 162 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162452758 Common secD protein-export membrane protein SecD sce4482 221 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 162455887 Nonpathogen - hypothetical protein sce7605 5 None None None 162449690 Common - hypothetical protein sce1419 20 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 162453804 Common - Cytochrome P450 CYP117B1 sce5528 90 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162448620 Common - two-component sensor histidine kinase sce0350 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453543 Common vanW vancomycin resistance gene sce5267 37 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 162448833 Nonpathogen - hypothetical protein sce0563 1 None None None 162449380 Common mdtA1 RND family efflux transporter sce1110 156 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 162452109 Common lepA GTP-binding protein LepA sce3836 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 162456779 Common panE3 putative 2-dehydropantoate 2-reductase sce8496 104 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 162452569 Common adh4 Alcohol dehydrogenase sce4293 203 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 162449121 Common - putative periplasmic protein sce0851 18 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162455768 Common - hypothetical protein sce7486 15 COG3682 COG3682, Predicted transcriptional regulator Transcription 162453835 Common betI HTH-type transcriptional regulator betI. sce5559 55 COG1309 AcrR, Transcriptional regulator Transcription 162453583 Nonpathogen - putative secreted protein sce5307 1 None None None 162450909 Common - Peptidyl-glycine alpha-amidating monooxygenase precursor sce2637 6 None None None 162450953 Common - high-affinity nitrate transporter, putative sce2681 72 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 162451396 Nonpathogen - hypothetical protein sce3124 1 None None None 162456238 Nonpathogen rpmC 50S ribosomal protein L29 sce7955 2 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 162456028 Nonpathogen - hypothetical protein sce7746 1 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 162451061 Nonpathogen - hypothetical protein sce2789 1 None None None 162448785 Nonpathogen - hypothetical GAF domain protein sce0515 2 COG2203 FhlA, FOG: GAF domain Signal transduction mechanisms 162450680 Common mreB rod shape-determining protein MreB sce2408 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 162452771 Common - putative Aldehyde dehydrogenase sce4495 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 162450196 Nonpathogen - put. Membrane protein sce1924 1 None None None 162453113 Common - put. Phosphoglucomutase/Phosphomannomutase sce4837 235 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 162451338 Common - hypothetical protein sce3066 28 COG4312 COG4312, Uncharacterized protein conserved in bacteria Function unknown 162454052 Nonpathogen - hypothetical protein sce5776 1 None None None 162455048 Nonpathogen - putative secreted protein sce6766 1 None None None 162450791 Nonpathogen - hypothetical protein sce2520 1 None None None 162450850 Common fbp2 Fructose-bisphosphatase sce2578 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 162454778 Common - hypothetical protein sce6496 127 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162453554 Nonpathogen - hypothetical protein sce5278 1 COG5319 COG5319, Uncharacterized protein conserved in bacteria Function unknown 162448315 Common - predicted acetyltransferase sce0046 3 COG0456 RimI, Acetyltransferases General function prediction only 162455313 Common - hypothetical protein sce7031 40 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162452411 Common chiD Hybrid polyketide synthase/nonribosomal peptide synthetase sce4135 240 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162453899 Common ubiE3 SAM-dependent methyltransferase sce5623 204 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162455662 Nonpathogen - hypothetical protein sce7380 1 None None None 162449096 Common - hypothetical protein sce0826 37 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162450681 Common mreC rod shape-determining protein MreC sce2409 90 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 162456120 Common - Putative secreted protein sce7837 23 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 162452214 Common - hypothetical protein sce3941 5 None None None 162451828 Common - bmp family protein sce3555 50 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 162448397 Common metG1 hypothetical protein sce0127 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162451416 Common parA2 Partition protein, ParA homolog sce3144 216 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162454331 Common - ECF-family RNA polymerase sigma factor sce6054 144 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454138 Common deoD hypothetical protein sce5862 127 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 162452241 Nonpathogen - hypothetical protein sce3968 2 None None None 162448891 Nonpathogen - hypothetical protein sce0621 2 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 162449337 Common recN recombination protein N sce1067 197 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 162454597 Common - Protein kinase sce6317 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449202 Common - two-component sensor histidine kinase sce0932 178 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162453145 Common - NDP-hexose 4,6-dehydratase sce4869 214 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162456246 Common - UbiE/COQ5 methyltransferase sce7963 180 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162449913 Nonpathogen - hypothetical protein sce1642 1 None None None 162451325 Common - glycosyltransferase sce3053 46 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162454347 Common - hypothetical protein sce6070 13 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162456364 Common metG3 hypothetical protein sce8081 221 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162448371 Common tauD1 putative Taurine dioxygenase sce0101 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 162453686 Common - transcriptional regulator, AraC family sce5410 3 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 162455912 Nonpathogen - putative DNA transport competence protein sce7630 1 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 162449283 Common - Protein kinase sce1013 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449798 Common ilvD1 Dihydroxy-acid dehydratase sce1527 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 162448324 Nonpathogen - hypothetical protein sce0055 1 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 162452001 Nonpathogen - putative secreted protein sce3728 1 None None None 162452977 Common napB diheme cytochrome C precursor sce4701 2 COG3043 NapB, Nitrate reductase cytochrome c-type subunit Energy production and conversion 162449785 Common - hypothetical protein sce1514 124 COG0431 COG0431, Predicted flavoprotein General function prediction only 162457034 Nonpathogen - hypothetical protein sce8749 1 None None None 162452223 Nonpathogen - hypothetical protein sce3950 1 None None None 162452883 Common - hypothetical protein sce4607 7 None None None 162454831 Common ureC urease alpha subunit sce6549 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 162456833 Common - transcriptional regulator, TetR family sce8550 24 COG1309 AcrR, Transcriptional regulator Transcription 162455065 Common - hypothetical protein sce6783 11 None None None 162456896 Common mgtE2 Mg2+ transporter sce8613 193 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 162454416 Common - transposase sce6137 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455608 Common - O-acetyltransferase sce7326 215 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 162453250 Common - transcriptional regulator, TetR family sce4974 89 COG1309 AcrR, Transcriptional regulator Transcription 162450213 Nonpathogen - hypothetical protein sce1941 1 None None None 162452710 Common - hypothetical protein sce4434 137 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 162456992 Nonpathogen - hypothetical protein sce8708 1 None None None 162456989 Nonpathogen - hypothetical protein sce8705 3 None None None 162451964 Common galE2 hypothetical protein sce3691 231 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455130 Nonpathogen - hypothetical protein sce6848 1 None None None 162452149 Common nrdB Ribonucleotide-diphosphate reductase sce3876 148 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 162455872 Nonpathogen - hypothetical protein sce7590 1 COG5373 COG5373, Predicted membrane protein Function unknown 162448385 Nonpathogen - hypothetical protein sce0115 1 None None None 162454457 Nonpathogen - hypothetical protein sce6177 1 None None None 162453089 Common - hypothetical protein sce4813 19 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162457431 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase sce9145 213 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 162448279 Common hrcA heat-inducible transcriptional repressor sce0010 149 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 162456903 Common ygcM3 putative 6-pyruvoyltetrahydropterin synthase sce8620 113 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 162452638 Common - hypothetical protein sce4362 4 COG1633 COG1633, Uncharacterized conserved protein Function unknown 162453982 Nonpathogen - hypothetical protein sce5706 1 None None None 162456853 Nonpathogen - hypothetical protein sce8570 3 None None None 162452571 Common - permease of the drug/metabolite transporter (DMT) superfamily sce4294 59 COG2962 RarD, Predicted permeases General function prediction only 162454835 Common sdhC1 hypothetical protein sce6553 28 None None None 162454370 Nonpathogen - hypothetical protein sce6093 1 None None None 162448334 Common - hypothetical protein sce0065 8 None None None 162454689 Common - putative peptidase sce6409 113 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162457415 Common - putative omega-3 fatty acid desaturase transmembrane protein sce9129 10 COG3239 DesA, Fatty acid desaturase Lipid metabolism 162455672 Common amt2 ammonium transporter sce7390 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 162456785 Nonpathogen - hypothetical protein sce8502 1 None None None 162450442 Nonpathogen - hypothetical protein sce2170 1 None None None 162455955 Nonpathogen - hypothetical protein sce7673 1 None None None 162457624 Common - hypothetical protein sce9338 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 162451784 Common - hypothetical protein sce3511 15 None None None 162457099 Common - putative cytochrome c peroxidase sce8814 19 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162455880 Common metB2 Cystathionine gamma-synthase sce7598 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 162449318 Common - putative acetyltransferase sce1048 88 COG3153 COG3153, Predicted acetyltransferase General function prediction only 162451852 Nonpathogen - hypothetical protein sce3578 1 None None None 162449803 Nonpathogen - hypothetical protein sce1532 2 None None None 162453841 Nonpathogen - transposase sce5565 1 None None None 162453855 Common - putative branched-chain amino acid transport system substrate-binding protein sce5579 132 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 162454393 Nonpathogen - hypothetical protein sce6114 7 COG1510 COG1510, Predicted transcriptional regulators Transcription 162448646 Nonpathogen - hypothetical protein sce0376 1 COG5607 COG5607, Uncharacterized conserved protein Function unknown 162452372 Common - probable secreted serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member sce4096 29 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162449321 Common purC Phosphoribosylaminoimidazolesuccinocarboxamide synthase sce1051 181 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 162452290 Nonpathogen - hypothetical protein-signal peptide prediction sce4016 6 None None None 162451612 Nonpathogen - hypothetical protein sce3340 1 None None None 162452435 Nonpathogen - hypothetical protein sce4159 1 COG5373 COG5373, Predicted membrane protein Function unknown 162451630 Common - hypothetical protein sce3358 2 None None None 162453533 Nonpathogen - endo-1,4-beta-glucanase sce5257 1 None None None 162450919 Nonpathogen - putative secreted protein sce2647 1 None None None 162454822 Common prsA1 putative Ribose-phosphate diphosphokinase sce6540 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 162457126 Common - hypothetical protein sce8841 4 None None None 162457021 Common - Biotin carboxylase related protein sce8736 222 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 162457428 Common sucC Succinate--CoA ligase (ADP-forming) sce9142 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 162452588 Nonpathogen - putative secreted protein sce4312 1 None None None 162457008 Common - transcriptional regulator sce8724 56 COG3800 COG3800, Predicted transcriptional regulator General function prediction only 162450966 Common - hypothetical protein sce2694 3 None None None 162454638 Common - hypothetical protein sce6358 3 None None None 162453917 Nonpathogen - hypothetical protein sce5641 4 COG4907 COG4907, Predicted membrane protein Function unknown 162450394 Common - Putative multicopper oxidase sce2122 48 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 162450424 Common gst6 putative glutathione S-transferase protein sce2152 4 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162448637 Common - probable surface antigen sce0367 81 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 162449250 Common - putative transcriptional regulator sce0980 28 COG2188 PhnF, Transcriptional regulators Transcription 162456667 Common - hypothetical protein sce8384 2 None None None 162449301 Nonpathogen - hypothetical protein sce1031 9 None None None 162453783 Nonpathogen - hypothetical protein sce5507 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162449828 Common - hypothetical protein sce1557 68 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455472 Nonpathogen - hypothetical protein sce7190 2 COG4867 COG4867, Uncharacterized protein with a von Willebrand factor type A (vWA) domain General function prediction only 162451288 Common - hypothetical protein sce3016 60 COG0824 FcbC, Predicted thioesterase General function prediction only 162453008 Common - hypothetical protein sce4732 6 COG5126 FRQ1, Ca2+-binding protein (EF-Hand superfamily) Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only 162450774 Nonpathogen - hypothetical protein sce2502 1 None None None 162452080 Common - putative Metallo-Phosphoesterase sce3807 27 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162453230 Nonpathogen - hypothetical protein sce4955 1 None None None 162454479 Nonpathogen - hypothetical protein sce6200 2 COG4243 COG4243, Predicted membrane protein Function unknown 162454475 Common gdhA2 Glutamate dehydrogenase sce6195 180 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 162452994 Common - hypothetical protein sce4718 20 COG3864 COG3864, Uncharacterized protein conserved in bacteria Function unknown 162456147 Common alkA putative DNA-3-methyladenine glycosidase sce7864 22 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 162452692 Common - putative isochorismatase sce4416 133 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162451511 Common - superfamily II DNA and RNA helicase sce3239 26 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 162453317 Common thuE Trehalose/maltose-binding protein sce5041 111 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162455166 Nonpathogen - hypothetical protein sce6884 1 COG0070 GltB, Glutamate synthase domain 3 Amino acid transport and metabolism 162455267 Nonpathogen - hypothetical protein sce6985 1 None None None 162448630 Nonpathogen - hypothetical protein sce0360 1 None None None 162455361 Common - hypothetical protein sce7079 8 None None None 162454590 Nonpathogen - hypothetical protein sce6310 2 None None None 162451267 Common - putative biopolymer transport protein sce2995 2 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162452100 Nonpathogen - Low-density lipoprotein receptor-related protein sce3827 1 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162450363 Nonpathogen - hypothetical protein sce2091 1 None None None 162453953 Common - hypothetical protein sce5677 3 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 162454814 Nonpathogen - hypothetical protein sce6532 1 None None None 162448960 Common - Fatty acid desaturase sce0690 62 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 162451307 Common aroA1 3-phosphoshikimate 1-carboxyvinyltransferase sce3035 228 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 162452506 Nonpathogen - hypothetical protein sce4230 9 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 162454987 Nonpathogen - transposase sce6705 1 None None None 162456031 Nonpathogen - hypothetical protein sce7749 3 None None None 162450716 Nonpathogen - hypothetical protein sce2444 3 None None None 162456351 Common - similar to putative transposase sce8068 30 COG5464 COG5464, Uncharacterized conserved protein Function unknown 162451181 Nonpathogen - hypothetical protein sce2909 1 None None None 162451299 Common prrA hypothetical protein sce3027 36 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 162455373 Common - hypothetical protein sce7091 175 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 162453362 Common - Sigma-54 dependent transcriptional regulator sce5086 165 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 162452312 Common - hypothetical protein sce4038 170 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 162449951 Nonpathogen - hypothetical protein sce1681 3 None None None 162451228 Common - two-component system sensor protein sce2956 27 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162451212 Common moaC putative molybdenum cofactor biosynthesis protein C sce2940 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 162452379 Common - ABC transporter, periplasmic substrate-binding protein sce4103 20 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 162457135 Common - transcriptional regulator, AraC family sce8850 76 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 162455235 Common - putative ABC-2 type transport system ATP-binding protein sce6953 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 162448353 Common - pseudogene sce_pseudo_01 72 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 162454426 Common - hypothetical protein sce6146 57 COG0433 COG0433, Predicted ATPase General function prediction only 162450091 Nonpathogen - hypothetical protein sce1820 1 None None None 162453700 Nonpathogen - hypothetical protein sce5424 1 None None None 162450898 Common - putative secreted protein sce2626 5 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162454279 Nonpathogen - hypothetical protein sce6002 1 None None None 162452680 Nonpathogen - hypothetical protein sce4404 2 None None None 162452840 Nonpathogen - hypothetical protein sce4564 1 None None None 162451209 Common - Protein kinase sce2937 143 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454721 Common - hypothetical protein sce6439 14 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 162448967 Nonpathogen - hypothetical protein sce0697 1 None None None 162452015 Common rsbT3 Protein kinase sce3742 30 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 162456001 Nonpathogen - hypothetical protein sce7719 1 None None None 162456174 Nonpathogen - hypothetical protein sce7891 2 None None None 162452860 Common - hypothetical protein sce4584 19 COG0657 Aes, Esterase/lipase Lipid metabolism 162451167 Nonpathogen - hypothetical protein sce2895 3 None None None 162450284 Common gcvP1 Glycine dehydrogenase (decarboxylating) sce2012 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 162455328 Nonpathogen - Putative HTH-type transcriptional regulator ydcN. sce7046 1 COG1396 HipB, Predicted transcriptional regulators Transcription 162456373 Nonpathogen - hypothetical protein sce8090 3 None None None 162455571 Nonpathogen - hypothetical protein sce7289 1 None None None 162452904 Common - hypothetical protein sce4628 35 COG4335 COG4335, DNA alkylation repair enzyme DNA replication, recombination, and repair 162450222 Nonpathogen - hypothetical protein sce1950 2 None None None 162455695 Nonpathogen - hypothetical protein sce7413 1 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 162456440 Nonpathogen - hypothetical protein sce8157 1 None None None 162450991 Common - hypothetical protein sce2719 89 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162449005 Common - hypothetical protein sce0735 7 None None None 162455527 Common rplT 50S ribosomal protein L20 sce7245 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 162455716 Common - hypothetical protein sce7434 92 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 162451110 Common lon2 ATP-dependent protease La sce2838 210 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 162450989 Common meaB methylmalonyl-CoA mutase component sce2717 99 COG1703 ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family Amino acid transport and metabolism 162454293 Common - hypothetical protein sce6016 217 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162455087 Nonpathogen - hypothetical protein sce6805 2 None None None 162451727 Common - hypothetical protein sce3454 16 None None None 162457048 Nonpathogen - PE-PGRS family protein sce8763 2 None None None 162457453 Common hemL Glutamate-1-semialdehyde 2,1-aminomutase sce9167 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 162452635 Common plsC4 1-acylglycerol-3-phosphate O-acyltransferase sce4359 168 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162451535 Nonpathogen - hypothetical protein sce3263 5 None None None 162457050 Nonpathogen - hypothetical protein sce8765 1 None None None 162455748 Common trkA2 potassium uptake system protein, TrkA-family sce7466 35 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 162456242 Nonpathogen - hypothetical protein sce7959 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162456540 Common - non-ribosomal peptide synthetase sce8257 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162452383 Common - hypothetical protein sce4107 19 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162454752 Nonpathogen - hypothetical protein sce6470 1 None None None 162453648 Nonpathogen - hypothetical protein sce5372 1 None None None 162455627 Common - NDP-sugar acetyltransferase sce7345 214 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 162456014 Common - transcriptional regulator, ArsR family sce7732 100 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162453452 Common - conserved hypothetical protein DUF181 sce5176 41 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162448807 Common - hypothetical protein sce0537 9 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 162452922 Common - hypothetical protein sce4646 2 None None None 162452616 Nonpathogen - putative secreted protein sce4340 1 None None None 162456556 Common - putative Methanol dehydrogenase regulatory protein sce8273 176 COG0714 COG0714, MoxR-like ATPases General function prediction only 162448470 Common - putative cytochrome P450 CYP261A1 sce0200 72 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162450860 Common - hypothetical protein sce2588 26 COG3552 CoxE, Protein containing von Willebrand factor type A (vWA) domain General function prediction only 162451559 Common - sensor histidine kinase sce3287 36 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453402 Nonpathogen - hypothetical protein sce5126 3 COG5373 COG5373, Predicted membrane protein Function unknown 162449439 Common - Alcohol dehydrogenase sce1169 176 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 162451731 Common oppB2 oligopeptide transport permease protein sce3458 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 162451976 Common nifS Cysteine desulfurase sce3703 224 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 162455203 Nonpathogen - hypothetical protein sce6921 1 None None None 162449834 Common - Alpha-1-antitrypsin-like protein CM55-MS precursor. sce1563 31 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162450372 Nonpathogen - hypothetical protein sce2100 11 None None None 162453155 Nonpathogen - hypothetical protein sce4879 1 None None None 162450707 Common - putative sensor kinase sce2435 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162449069 Common - putative alkaline phosphatase sce0799 56 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 162450605 Nonpathogen - hypothetical protein sce2333 2 None None None 162449899 Common - RND family efflux transporter sce1628 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 162455567 Nonpathogen - putative secreted protein sce7285 1 None None None 162450765 Common yheT hypothetical protein sce2493 65 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 162450905 Common mfd transcription-repair coupling factor sce2633 218 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 162450687 Common - hypothetical protein sce2415 89 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 162455940 Nonpathogen - hypothetical protein sce7658 3 None None None 162456609 Nonpathogen - hypothetical protein sce8326 1 None None None 162448615 Common - NRPS/PKS hybrid sce0345 234 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162449464 Common - transcriptional regulator, LysR family sce1194 159 COG0583 LysR, Transcriptional regulator Transcription 162450986 Common - positive regulator of sigma-B sce2714 49 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162454093 Common - hypothetical protein sce5817 19 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162452797 Nonpathogen - hypothetical protein sce4521 1 None None None 162454367 Nonpathogen - hypothetical protein sce6090 1 None None None 162453280 Common - hypothetical protein sce5004 10 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455546 Common cafA ribonuclease G sce7264 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 162456756 Common - pentapeptide repeats hypothetical protein sce8473 81 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162450592 Common - Protein kinase sce2320 60 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450931 Common - probable chemotaxis sensory transducer sce2659 172 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 162457581 Common - putative protease with a signal peptide sce9295 7 None None None 162450485 Nonpathogen - hypothetical protein sce2213 1 None None None 162455796 Nonpathogen - PE-PGRS family protein sce7514 1 None None None 162457519 Nonpathogen - hypothetical protein sce9233 2 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 162457618 Nonpathogen - hypothetical protein sce9332 2 None None None 162448539 Common - hypothetical protein sce0269 93 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 162450313 Common - FHA domain protein sce2041 14 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162456617 Nonpathogen - hypothetical protein sce8334 1 None None None 162457510 Nonpathogen - hypothetical protein sce9224 1 None None None 162450208 Common - Putative NADH dehydrogenase sce1936 207 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 162457030 Common - hypothetical protein sce8745 40 COG3002 COG3002, Uncharacterized protein conserved in bacteria Function unknown 162454254 Common - putative fumarylacetoacetate hydrolase family protein sce5977 91 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 162452125 Common mltD2 membrane-bound lytic murein transglycosylase D sce3852 133 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162451804 Nonpathogen - hypothetical protein sce3531 2 None None None 162455022 Common - transcriptional regulator, AraC family sce6740 61 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162451621 Nonpathogen - hypothetical protein sce3349 1 None None None 162454846 Nonpathogen - hypothetical protein sce6564 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162450054 Common - transcriptional regulator, MarR family sce1783 125 COG1846 MarR, Transcriptional regulators Transcription 162448763 Common - probable Phosphoglycerate mutase sce0493 135 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 162449689 Common - two-component system, response regulator sce1417 65 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454469 Common - hypothetical protein sce6189 44 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 162454891 Common - hypothetical protein sce6609 11 COG4219 MecR1, Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component Transcription / Signal transduction mechanisms 162450242 Common celD hypothetical protein sce1970 23 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 162451821 Nonpathogen - hypothetical protein sce3548 1 None None None 162451128 Common yqcB Pseudouridylate synthase/tRNA pseudouridine synthase C sce2856 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 162455467 Common - cAMP-binding protein, CRP family of transcriptional regulators sce7185 151 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162448530 Common - hypothetical protein sce0260 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162449183 Nonpathogen - hypothetical protein sce0914 1 None None None 162450437 Nonpathogen - hypothetical protein sce2165 1 None None None 162451509 Common - phospholipase D/transphosphatidylase sce3237 8 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162449956 Nonpathogen - hypothetical protein sce1685 1 None None None 162448509 Common cbiD cobalamin biosynthesis protein CbiD, probable sce0239 84 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 162455228 Common yrdC1 conserved putative translation factor sce6946 221 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 162450975 Common - FHA domain protein sce2703 5 None None None 162452303 Common rbsA1 Ribose transport ATP-binding protein sce4029 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162453294 Common - hypothetical protein sce5018 34 COG1106 COG1106, Predicted ATPases General function prediction only 162455985 Common - heat shock protein, Hsp20 family sce7703 117 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 162453739 Nonpathogen - hypothetical protein sce5463 1 None None None 162449707 Common - hypothetical protein sce1436 54 COG2234 Iap, Predicted aminopeptidases General function prediction only 162456569 Common ggt2 Gamma-glutamyltransferase sce8286 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 162457516 Nonpathogen - hypothetical protein sce9230 1 None None None 162451618 Nonpathogen - hypothetical protein sce3346 1 None None None 162452778 Common pgm2 Phosphoglycerate mutase sce4502 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 162449645 Common yedI hypothetical protein sce1374 61 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 162450468 Nonpathogen - hypothetical protein sce2196 1 None None None 162456762 Nonpathogen - hypothetical protein sce8479 1 None None None 162453200 Nonpathogen - hypothetical protein sce4924 1 None None None 162451283 Common menG ubiquinone/menaquinone biosynthesis methyltransferase sce3011 218 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162452137 Nonpathogen - hypothetical protein sce3864 4 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162454907 Nonpathogen - hypothetical protein sce6625 1 None None None 162451031 Common - ABC transporter ATP-binding protein sce2759 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162455536 Common - hypothetical protein sce7254 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 162450321 Common - two-component system response regulator sce2049 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162449225 Common - hypothetical protein sce0955 91 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 162452330 Nonpathogen - hypothetical protein sce4056 2 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455689 Common glmS Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) sce7407 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 162450653 Common - Riboflavin biosynthesis protein ribD sce2381 66 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 162455656 Common moxR3 methanol dehydrogenase regulator (moxR) homolog sce7373 174 COG0714 COG0714, MoxR-like ATPases General function prediction only 162449060 Common - hypothetical protein sce0790 25 COG3482 COG3482, Uncharacterized conserved protein Function unknown 162456218 Common rplQ 50S ribosomal protein L17 sce7935 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 162457168 Common - putative secreted protein sce8883 4 None None None 162454900 Common - transposase sce6618 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162450669 Nonpathogen - hypothetical protein sce2397 3 None None None 162456608 Common prc2 C-terminal processing peptidase sce8325 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162451068 Nonpathogen - hypothetical protein sce2796 1 None None None 162451316 Common tam1 Trans-aconitate 2-methyltransferase sce3044 156 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162453251 Nonpathogen - putative secreted protein sce4975 5 COG4907 COG4907, Predicted membrane protein Function unknown 162452130 Nonpathogen - hypothetical protein sce3857 1 None None None 162449892 Common pssA1 hypothetical protein sce1621 150 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 162452532 Nonpathogen - putative secreted protein sce4256 1 COG5281 COG5281, Phage-related minor tail protein Function unknown 162451866 Nonpathogen - hypothetical protein sce3593 2 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 162451942 Nonpathogen - regulatory protein FlaEY sce3669 6 None None None 162452605 Common - hypothetical protein sce4329 8 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451044 Nonpathogen - hypothetical protein sce2772 1 None None None 162455513 Common - putative iron sulfur binding protein sce7231 236 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 162449073 Common - chemotaxis protein CheY sce0803 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162455033 Nonpathogen - hypothetical protein sce6751 1 None None None 162455489 Nonpathogen - hypothetical membrane protein sce7207 8 COG0701 COG0701, Predicted permeases General function prediction only 162455210 Nonpathogen - hypothetical protein sce6928 1 None None None 162452158 Nonpathogen mxcI hypothetical protein sce3885 3 None None None 162453414 Common - Protein kinase sce5138 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453037 Nonpathogen - hypothetical protein sce4761 1 None None None 162451108 Nonpathogen - hypothetical protein sce2836 2 None None None 162451529 Nonpathogen - hypothetical protein sce3257 3 None None None 162453506 Common - hypothetical protein sce5230 21 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 162450829 Common - putative secreted protein sce2557 6 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162453687 Nonpathogen - hypothetical protein sce5411 1 None None None 162456924 Nonpathogen - putative secreted protein sce8641 1 None None None 162450504 Nonpathogen - hypothetical protein sce2232 1 None None None 162449163 Common - hypothetical protein sce0893 6 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 162451859 Nonpathogen - hypothetical protein sce3586 6 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 162448486 Common - hypothetical protein sce0216 27 None None None 162457393 Nonpathogen - hypothetical protein sce9108 1 None None None 162451665 Common - Protein kinase sce3393 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449270 Common - hypothetical protein sce1000 5 None None None 162453372 Common - Sigma-54 dependent transcriptional regulator sce5096 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162451343 Nonpathogen - hypothetical protein sce3071 1 None None None 162456437 Nonpathogen - hypothetical protein sce8154 4 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 162456409 Nonpathogen - Putative leucyl aminopeptidase sce8126 4 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 162456522 Common rbsA2 Ribose transport ATP-binding protein sce8239 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162455353 Common - putative ABC-transporter sce7071 132 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 162449066 Common - hypothetical protein-transmembrane prediction sce0796 7 None None None 162455364 Nonpathogen - hypothetical protein sce7083 1 None None None 162457001 Nonpathogen - putative secreted protein sce8717 1 None None None 162450819 Common trmA RNA methyltransferase sce2547 220 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 162451202 Common - hypothetical protein sce2930 7 None None None 162456972 Nonpathogen - putative secreted protein sce8688 1 None None None 162450350 Nonpathogen - Probable Lactoylglutathione lyase and related lyases sce2078 9 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162448407 Nonpathogen - hypothetical protein sce0137 4 None None None 162450973 Common - Rhs element Vgr protein sce2701 62 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162449134 Common - putative secreted protein sce0864 15 None None None 162450333 Common - hypothetical protein sce2061 2 None None None 162455705 Nonpathogen - hypothetical protein sce7423 3 None None None 162455124 Common - Sigma-54 dependent transcriptional regulator. sce6842 170 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162452877 Common xynB3 Endo-1,4-beta-xylanase sce4601 31 COG3693 XynA, Beta-1,4-xylanase Carbohydrate transport and metabolism 162452255 Common - xenobiotic reductase A sce3982 11 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 162453389 Common - hypothetical protein sce5113 6 COG4402 COG4402, Uncharacterized protein conserved in bacteria Function unknown 162453875 Common - hypothetical protein sce5599 96 COG1403 McrA, Restriction endonuclease Defense mechanisms 162452637 Common - hypothetical protein sce4361 17 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 162453033 Nonpathogen - hypothetical protein predicted sce4757 5 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162449585 Common - hypothetical protein sce1314 7 None None None 162452889 Common - Protein kinase sce4613 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451273 Nonpathogen - hypothetical protein sce3001 1 None None None 162456236 Common rplN 50S ribosomal protein L14 sce7953 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 162457621 Common - hypothetical protein sce9335 5 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449600 Nonpathogen - putative secreted protein sce1329 1 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 162450154 Nonpathogen - hypothetical protein sce1883 1 None None None 162449552 Nonpathogen - hypothetical protein sce1281 1 None None None 162448472 Nonpathogen - hypothetical protein sce0202 7 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162449384 Common - transcriptional regulator, LysR family sce1114 190 COG0583 LysR, Transcriptional regulator Transcription 162454440 Nonpathogen - hypothetical protein sce6160 1 None None None 162451347 Common - hypothetical transferase sce3075 6 None None None 162452972 Nonpathogen - hypothetical protein sce4696 7 None None None 162452116 Nonpathogen - hypothetical protein sce3843 33 COG1355 COG1355, Predicted dioxygenase General function prediction only 162454661 Common - hypothetical protein sce6381 8 None None None 162455444 Common - ATP-dependent Clp protease, ATP-binding subunit,two ATP-binding domains sce7162 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 162450643 Common - putative secreted protein sce2371 18 None None None 162451073 Nonpathogen - hypothetical protein sce2801 1 None None None 162454577 Nonpathogen - putative secreted protein sce6297 1 None None None 162449654 Common - two-component sensor histidine kinase sce1383 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453459 Common - LysR-family transcriptional regulator sce5183 88 COG0583 LysR, Transcriptional regulator Transcription 162456186 Common - hypothetical protein sce7903 42 COG3899 COG3899, Predicted ATPase General function prediction only 162456018 Nonpathogen - putative secreted protein sce7736 3 COG4099 COG4099, Predicted peptidase General function prediction only 162454750 Nonpathogen - ECF-family RNA polymerase sigma factor sce6468 4 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455504 Common - serine protease, HtrA/DegQ/DegS family sce7222 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162451818 Common - conserved carbohydrate-binding protein, Rhs family sce3545 44 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162451352 Common phoR2 two-component histidine kinase sce3080 223 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162448839 Common - Protein kinase sce0569 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453260 Nonpathogen - hypothetical protein sce4984 6 COG3913 SciT, Uncharacterized protein conserved in bacteria Function unknown 162452062 Nonpathogen - hypothetical protein sce3790 2 None None None 162456183 Common - hypothetical protein sce7900 126 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162450300 Common - hypothetical protein sce2028 159 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 162452649 Common - hypothetical protein sce4373 162 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162457595 Common moeA2 molybdenum cofactor biosynthesis protein sce9309 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 162457257 Nonpathogen - hypothetical protein sce8972 1 None None None 162454012 Common - AMP-dependent synthetase and ligase sce5736 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162453278 Nonpathogen - FHA domain protein sce5002 2 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162454701 Common - hypothetical protein sce6421 60 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 162453096 Nonpathogen - hypothetical protein sce4820 4 COG3809 COG3809, Uncharacterized protein conserved in bacteria Function unknown 162451688 Common - hypothetical protein sce3416 26 None None None 162456634 Nonpathogen - Putative secreted protein sce8351 1 None None None 162457305 Nonpathogen - hypothetical protein sce9020 1 None None None 162449808 Common - hypothetical protein sce1537 6 None None None 162455643 Common - adenine DNA methyltransferase sce7361 69 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 162454188 Common - heat shock protein groEL sce5911 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 162454679 Common dht Dihydropyrimidinase sce6399 208 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 162449370 Common trpD hypothetical protein sce1100 219 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 162448873 Common rimJ2 acetyltransferase, GNAT family sce0603 82 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162455456 Nonpathogen - hypothetical protein sce7174 2 None None None 162455129 Common - glycosyl hydrolase, family sce6847 126 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 162448348 Nonpathogen chlG putative Octaprenyltransferase sce0079 1 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 162451995 Common - probable restriction endonuclease sce3722 23 COG1403 McrA, Restriction endonuclease Defense mechanisms 162457221 Common - hypothetical protein sce8936 37 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162456151 Common - hypothetical protein sce7868 11 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162449230 Nonpathogen - hypothetical protein sce0960 1 None None None 162453591 Common - Protein kinase sce5315 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450103 Common srfJ glucosylceramidase (O-glycosyl hydrolase) sce1832 23 COG5520 COG5520, O-Glycosyl hydrolase Cell envelope biogenesis, outer membrane 162452414 Common chiA putative acyltransferase/oxidoreductase sce4138 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 162455053 Common - NDP-sugar oxidoreductase similar to UDP-glucose 4-epimerase sce6771 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162453807 Common - hypothetical protein sce5531 17 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162456753 Common - pentapeptide repeats hypothetical protein sce8470 66 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162455589 Common - hypothetical protein sce7307 35 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 162453675 Common xseA exodeoxyribonuclease VII, large subunit sce5399 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 162454127 Common - hypothetical protein sce5851 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 162450609 Common trxA2 thioredoxin sce2337 230 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162455399 Common - hypothetical protein sce7117 13 COG3898 COG3898, Uncharacterized membrane-bound protein Function unknown 162454266 Common bacA undecaprenyl-diphosphatase sce5989 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 162451683 Common - Sigma-54 dependent transcriptional regulator sce3411 182 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162452250 Nonpathogen - hypothetical protein sce3977 1 None None None 162457004 Common - hypothetical protein sce8720 17 None None None 162449593 Common - ABC transporter permease protein sce1322 189 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 162454453 Nonpathogen - putative secreted protein sce6173 1 None None None 162457601 Common - conserved hypothetical protein with a vWF type A domain sce9315 40 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162456447 Common dnaN DNA polymerase III beta subunit sce8164 210 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 162456468 Nonpathogen - putative PE-PGRS family protein sce8185 1 COG4278 COG4278, Uncharacterized conserved protein Function unknown 162455563 Nonpathogen - hypothetical protein sce7281 2 None None None 162450171 Common - transposase sce1900 9 None None None 162455665 Common - hypothetical protein sce7383 139 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451628 Common - putative (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase sce3356 174 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 162454396 Common - hypothetical protein sce6117 7 None None None 162454034 Common - hypothetical protein sce5758 169 COG1959 COG1959, Predicted transcriptional regulator Transcription 162455437 Common rtcR Sigma-54 dependent transcriptional regulator sce7155 165 COG4650 RtcR, Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 162455552 Common mutS3 DNA mismatch repair protein sce7270 202 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 162453996 Common - hypothetical endo-1,4-beta-glucanase sce5720 6 None None None 162456326 Nonpathogen - hypothetical protein sce8043 2 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453767 Common xylH D-xylose ABC transporter, permease protein sce5491 135 COG4214 XylH, ABC-type xylose transport system, permease component Carbohydrate transport and metabolism 162449075 Common - Probable oxidoreductase sce0805 228 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 162453659 Nonpathogen - hypothetical protein sce5383 4 None None None 162456224 Common infA translation initiation factor IF-1 sce7941 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 162455285 Common - NDP-sugar oxidoreductase sce7003 229 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162453056 Nonpathogen - hypothetical protein sce4780 1 None None None 162456040 Common med Lipoprotein, Bmp family sce7758 103 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 162456915 Common - enoyl-CoA hydratase/isomerase family protein sce8632 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 162456340 Common algC hypothetical protein sce8057 239 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 162450944 Common - hypothetical protein sce2672 11 None None None 162454759 Nonpathogen - putative secreted protein sce6477 1 None None None 162451656 Common - Probable multidrug resistance protein sce3384 57 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162453360 Common - hypothetical protein sce5084 136 COG0432 COG0432, Uncharacterized conserved protein Function unknown 162451944 Common - Protein kinase sce3671 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455733 Common - Protein kinase sce7451 118 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449430 Nonpathogen - hypothetical protein sce1160 1 None None None 162449995 Nonpathogen - hypothetical protein sce1724 1 None None None 162452035 Common gmk putative Guanylate kinase sce3762 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 162457547 Common - Aspartate kinase sce9261 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 162457410 Common - transcriptional regulator, TetR family sce9124 88 COG1309 AcrR, Transcriptional regulator Transcription 162449903 Nonpathogen - hypothetical protein sce1632 1 None None None 162450184 Nonpathogen - hypothetical protein sce1913 1 None None None 162453492 Common - Transposase, probable sce5216 70 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 162453830 Nonpathogen - hypothetical protein sce5554 1 None None None 162449211 Common - calcineurin-like phosphoesterase family protein sce0941 6 None None None 162453355 Nonpathogen - hypothetical protein sce5079 1 None None None 162452227 Nonpathogen - hypothetical protein sce3954 1 None None None 162457407 Nonpathogen - hypothetical protein sce9121 2 None None None 162449622 Nonpathogen kdpF putative membrane protein of the Kdp complex sce1351 1 None None None 162452265 Nonpathogen - hypothetical protein sce3991 1 None None None 162455603 Common - glycosyltransferase sce7321 173 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 162457533 Nonpathogen - hypothetical protein sce9247 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162452629 Common pgl 6-phosphogluconolactonase sce4353 105 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 162451430 Nonpathogen - hypothetical protein sce3158 1 None None None 162454993 Nonpathogen - putative exported protein with glycine-rich central und C-terminal region sce6711 1 None None None 162453821 Common - transcriptional regulator, MerR family sce5545 4 COG0789 SoxR, Predicted transcriptional regulators Transcription 162450596 Common - Dihydrolipoyl dehydrogenase sce2324 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 162452460 Common - hypothetical protein sce4184 32 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162453638 Nonpathogen - hypothetical protein sce5362 3 None None None 162450936 Common - hypothetical protein sce2664 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 162450277 Common - hypothetical protein sce2005 45 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162452764 Nonpathogen - hypothetical protein sce4488 1 COG4282 SMI1, Protein involved in beta-1,3-glucan synthesis Carbohydrate transport and metabolism 162452985 Common - putative carboxylesterase sce4709 61 COG2272 PnbA, Carboxylesterase type B Lipid metabolism 162448608 Common - rubredoxin sce0338 123 COG1773 COG1773, Rubredoxin Energy production and conversion 162451223 Common dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase sce2951 126 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 162455989 Nonpathogen - hypothetical protein sce7707 1 None None None 162454058 Nonpathogen - hypothetical protein sce5782 1 None None None 162452553 Nonpathogen - hypothetical protein sce4277 1 None None None 162457318 Common - Putative phosphatidylserine decarboxylase sce9033 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 162457473 Nonpathogen - Tenascin precursor sce9187 3 None None None 162452450 Common - Protein kinase sce4174 126 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455874 Common - putative Cytochrome-c oxidase sce7592 160 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 162449924 Common - hypothetical protein sce1653 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162456160 Common - hypothetical integral membrane protein sce7877 6 None None None 162455930 Common - Hsp70 heat shock protein sce7648 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162449755 Nonpathogen - hypothetical protein sce1484 1 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 162451494 Common - hypothetical protein sce3222 47 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 162454008 Nonpathogen - hypothetical protein sce5732 12 None None None 162454955 Nonpathogen - hypothetical protein sce6673 2 None None None 162451439 Common - hypothetical protein sce3168 5 COG1547 COG1547, Uncharacterized conserved protein Function unknown 162456549 Nonpathogen - hypothetical protein sce8266 1 None None None 162452863 Common - Protein kinase sce4587 142 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453044 Common - ABC-type transporter, ATP-binding protein sce4768 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 162456267 Common - cell division protein fragment sce7984 198 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 162454192 Common asnS asparaginyl-tRNA synthetase sce5915 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 162456011 Common - putative oxidoreductase sce7729 194 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162455014 Nonpathogen - hypothetical protein sce6732 1 None None None 162456416 Common - putative universal stress protein sce8133 86 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 162448954 Nonpathogen - hypothetical protein sce0684 1 None None None 162454944 Nonpathogen - putative secreted protein sce6662 1 None None None 162450328 Common - Protein kinase sce2056 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456652 Nonpathogen - hypothetical protein sce8369 1 None None None 162456963 Nonpathogen - hypothetical protein sce8679 1 None None None 162450146 Nonpathogen - putative secreted protein sce1875 1 None None None 162450176 Common - hypothetical protein sce1905 100 COG3844 COG3844, Kynureninase Amino acid transport and metabolism 162452357 Common - Acyl-activating enzyme sce4081 191 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 162455026 Nonpathogen - hypothetical protein sce6744 1 None None None 162454446 Nonpathogen - hypothetical protein sce6166 1 None None None 162448962 Common - hypothetical protein sce0692 63 COG3791 COG3791, Uncharacterized conserved protein Function unknown 162453478 Nonpathogen - hypothetical protein sce5202 1 None None None 162452668 Nonpathogen - rhomboid family membrane protein sce4392 5 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 162453074 Common hyfF hydrogenase-4 component F sce4798 209 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 162450256 Common - transposase, IS4 family sce1984 27 None None None 162450475 Common cheA4 putative chemotaxis protein CheA sce2203 148 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 162455394 Common - transcriptional regulator, LysR family sce7112 187 COG0583 LysR, Transcriptional regulator Transcription 162451489 Common - serine/threonine-protein kinase sce3217 101 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448969 Nonpathogen - hypothetical protein sce0699 1 None None None 162453177 Common - ECF-family RNA polymerase sigma factor sce4901 99 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162454536 Nonpathogen - hypothetical protein sce6256 1 None None None 162457128 Common - transcriptional regulator, MarR family sce8843 5 COG1846 MarR, Transcriptional regulators Transcription 162449553 Common - hypothetical protein sce1282 10 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 162453394 Common - hypothetical protein sce5118 7 None None None 162454351 Common - hypothetical protein sce6074 38 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 162453937 Nonpathogen - hypothetical protein sce5661 1 None None None 162454552 Nonpathogen - Crossover junction endodeoxyribonuclease ruvC sce6272 1 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 162451607 Common - hypothetical protein sce3335 13 None None None 162457336 Common miaA hypothetical protein sce9051 212 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 162455149 Nonpathogen - hypothetical protein sce6867 2 None None None 162455897 Common accA acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha sce7615 182 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 162457196 Common - Probable class-V aminotransferase sce8911 241 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 162450022 Common rpsU 30S ribosomal protein S21 sce1751 12 None None None 162455979 Common - putative RNA-binding protein sce7697 65 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 162448524 Nonpathogen - hypothetical protein sce0254 6 None None None 162456049 Nonpathogen - hypothetical protein sce7767 1 None None None 162449447 Common - hypothetical protein sce1177 80 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 162449875 Common - Protein kinase sce1604 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451226 Common - two-component response regulator sce2954 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 162454691 Common - hypothetical protein sce6411 9 None None None 162456823 Common ffh signal recognition particle protein sce8540 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 162457448 Common - transposase, IS4 family sce9162 27 None None None 162454743 Common - probable oxidoreductase sce6461 29 COG1453 COG1453, Predicted oxidoreductases of the aldo/keto reductase family General function prediction only 162448547 Nonpathogen - hypothetical protein sce0277 1 None None None 162456573 Common - hypothetical protein sce8290 62 COG4637 COG4637, Predicted ATPase General function prediction only 162450094 Nonpathogen - hypothetical protein sce1823 1 None None None 162451019 Nonpathogen - hypothetical protein sce2747 1 None None None 162449057 Common - hypothetical protein sce0787 40 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 162456275 Nonpathogen - putative secreted protein sce7992 1 None None None 162454650 Common - conserved hypothetical protein with Kelch motif sce6370 32 None None None 162451381 Common - Protein kinase sce3109 160 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455637 Nonpathogen - hypothetical protein sce7355 1 None None None 162452307 Nonpathogen - PE-PGRS family protein sce4033 3 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451525 Nonpathogen - hypothetical protein sce3253 1 None None None 162452259 Nonpathogen - hypothetical protein sce3986 1 COG0679 COG0679, Predicted permeases General function prediction only 162452682 Nonpathogen - putative secreted protein sce4406 2 None None None 162457285 Common - Putative histone acetyltransferase sce9000 17 None None None 162448300 Nonpathogen - putative two component response regulator sce0031 1 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162451046 Nonpathogen - hypothetical protein sce2774 2 None None None 162448284 Nonpathogen - hypothetical protein sce0015 1 None None None 162449084 Common - hypothetical protein sce0814 15 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162454037 Nonpathogen - hypothetical protein sce5761 2 None None None 162453513 Common - Protein kinase sce5237 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453336 Common gltB1 Glutamate synthase (NADPH) sce5060 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 162454600 Nonpathogen - hypothetical protein sce6320 3 None None None 162457243 Nonpathogen - hypothetical protein sce8958 1 None None None 162449633 Nonpathogen - putative secreted protein sce1362 1 None None None 162451406 Common - put. Polysaccharide deacetylase family protein sce3134 35 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 162455921 Nonpathogen - hypothetical protein sce7639 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 162456726 Common - Probable chitinase sce8443 16 None None None 162453183 Common - ECF-family RNA polymerase sigma factor sce4907 66 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162453510 Nonpathogen - hypothetical protein sce5234 1 None None None 162450454 Common chsA Naringenin-chalcone synthase sce2182 39 COG3424 BcsA, Predicted naringenin-chalcone synthase Secondary metabolites biosynthesis, transport, and catabolism 162453292 Nonpathogen - hypothetical protein sce5016 1 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162457481 Common - histone deacetylase family protein sce9195 155 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 162448555 Common - hypothetical protein sce0285 84 COG4196 COG4196, Uncharacterized protein conserved in bacteria Function unknown 162454625 Nonpathogen - PE_PGRS family protein sce6345 1 None None None 162455303 Common - hypothetical protein/putative endoglucanase sce7021 7 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162452404 Nonpathogen - hypothetical protein sce4128 1 None None None 162455293 Common - hypothetical protein sce7011 6 None None None 162448939 Common soxB Sarcosine oxidase, beta subunit sce0669 140 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 162448459 Nonpathogen - hypothetical protein sce0189 1 None None None 162451388 Common - conserved carbohydrate-binding protein, Rhs family sce3116 72 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162455819 Common - hypothetical protein sce7537 13 None None None 162451759 Common chdh Choline dehydrogenase sce3486 86 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 162455098 Common - hypothetical membrane protein sce6816 10 None None None 162456305 Common - glycosyltransferase sce8022 183 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162452642 Common - Putative rhodanese-related sulfurtransferase sce4366 125 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 162454631 Common - Protein kinase sce6351 150 COG3899 COG3899, Predicted ATPase General function prediction only 162455532 Nonpathogen - hypothetical protein sce7250 1 None None None 162455735 Nonpathogen - hypothetical protein sce7453 3 None None None 162448692 Common - hypothetical protein sce0422 4 None None None 162456088 Common - hypothetical protein sce7806 223 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162448361 Common - hypothetical protein sce0091 5 None None None 162457250 Nonpathogen - hypothetical protein sce8965 1 None None None 162451370 Common - Hypothetical UDP-glucuronosyltransferase sce3098 29 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 162454251 Common - putative dienelactone hydrolase sce5974 13 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162452025 Common - hypothetical protein sce3752 162 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162454467 Common pilN hypothetical protein sce6187 12 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 162456214 Common - sensor histidine kinase sce7931 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162454971 Common - hypothetical protein sce6689 14 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 162451000 Common mtbA permease of the major facilitator superfamily,putative sugar transporter sce2728 120 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 162452563 Common - transposase, IS4 family sce4287 27 None None None 162450337 Common - hypothetical protein sce2065 8 None None None 162456196 Nonpathogen - hypothetical protein sce7913 1 None None None 162453923 Common - LysR-family transcriptional regulator sce5647 179 COG0583 LysR, Transcriptional regulator Transcription 162448917 Nonpathogen - hypothetical protein sce0647 1 None None None 162452195 Common accC1 hypothetical protein sce3922 227 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 162454502 Nonpathogen - hypothetical protein sce6222 1 None None None 162450413 Common - hypothetical protein sce2141 41 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 162457165 Nonpathogen - hypothetical protein sce8880 22 COG4880 COG4880, Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats General function prediction only 162452831 Common - hypothetical protein sce4555 127 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162453881 Common - hypothetical protein sce5605 10 None None None 162451594 Common - put. D-ribose-binding periplasmic protein sce3322 108 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162452859 Common - hypothetical protein sce4583 42 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 162455517 Nonpathogen - hypothetical protein sce7235 1 None None None 162452477 Common pckG hypothetical protein sce4201 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 162452423 Common - hypothetical protein sce4147 6 None None None 162456585 Common - hypothetical protein sce8302 30 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 162450578 Nonpathogen - hypothetical protein sce2306 3 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162455429 Common - Protein kinase sce7147 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451239 Nonpathogen - hypothetical protein sce2967 1 None None None 162448977 Common - hypothetical protein sce0707 80 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162451571 Nonpathogen - latent transforming growth factor beta binding protein sce3299 6 None None None 162454723 Nonpathogen - hypothetical protein sce6441 3 None None None 162448450 Common msbA4 ABC transporter family carbohydrate exporter sce0180 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 162456938 Common - hypothetical protein sce8655 15 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 162455827 Common - hypothetical protein sce7545 36 COG4637 COG4637, Predicted ATPase General function prediction only 162456520 Common rbsC3 Ribose ABC transporter permease protein sce8237 127 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 162453210 Common - hypothetical protein sce4934 50 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162456441 Nonpathogen - hypothetical protein sce8158 1 None None None 162453131 Common - Probable methyltransferase sce4855 168 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162450435 Common - hypothetical protein sce2163 2 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162453221 Common - conserved hypothetical membrane protein,probable permease of the major facilitator superfamily sce4945 38 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162450348 Nonpathogen - putative secreted protein sce2076 3 None None None 162453849 Common - putative ABC transporter ATP-binding protein sce5573 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162455690 Common hcaT permease of the major facilitator superfamily,probable 3-phenylpropionate transporter sce7408 41 None None None 162454376 Common - transposase sce6099 59 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455774 Nonpathogen - hypothetical protein sce7492 3 None None None 162453231 Common - heat shock protein, Hsp20 family sce4954 114 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 162451952 Common guaA1 GMP synthase (glutamine-hydrolysing) sce3679 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 162457385 Common - hypothetical protein sce9100 20 None None None 162450756 Nonpathogen - glycosyltransferase sce2484 6 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 162453138 Nonpathogen - hypothetical protein sce4862 1 None None None 162453989 Common - cell division cycle protein 48-related protein sce5713 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 162454556 Nonpathogen - hypothetical protein sce6276 1 None None None 162452087 Common acpP3 hypothetical protein sce3814 208 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162455486 Nonpathogen - hypothetical protein sce7204 1 None None None 162457201 Common - Protein kinase sce8916 160 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452875 Nonpathogen - hypothetical protein sce4599 1 None None None 162455158 Common aroA2 3-phosphoshikimate 1-carboxyvinyltransferase sce6876 203 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 162457015 Nonpathogen - hypothetical protein sce8730 3 None None None 162452739 Nonpathogen - hypothetical protein sce4464 1 None None None 162449945 Nonpathogen - hypothetical protein sce1674 1 None None None 162449826 Nonpathogen - hypothetical protein sce1555 1 None None None 162451098 Nonpathogen - hypothetical protein sce2826 1 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 162453829 Nonpathogen - hypothetical protein sce5553 2 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 162450319 Nonpathogen - hypothetical protein sce2047 3 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 162454496 Common - hypothetical protein sce6216 7 None None None 162454857 Nonpathogen - hypothetical protein sce6575 4 None None None 162449870 Common cheB putative Chemotaxis response regulator CheB type sce1599 221 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 162456026 Nonpathogen - putative secreted protein sce7744 1 None None None 162454288 Common cysC adenylyl-sulfate kinase sce6011 139 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 162452724 Nonpathogen - hypothetical protein sce4448 1 None None None 162456699 Common - hypothetical protein sce8416 5 None None None 162449327 Nonpathogen - hypothetical protein sce1057 1 None None None 162451315 Common - hypothetical protein sce3043 12 None None None 162455855 Common - hypothetical protein sce7573 102 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 162456527 Common - putative Protein phosphatase sce8244 17 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 162449123 Nonpathogen - hypothetical protein sce0853 1 None None None 162451457 Common - hypothetical protein sce3185 2 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162456882 Common - hypothetical protein sce8599 5 None None None 162457146 Common - MgtC family protein sce8861 116 COG1285 SapB, Uncharacterized membrane protein Function unknown 162452596 Common purF Amidophosphoribosyltransferase sce4320 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 162452487 Nonpathogen - Phosphoenolpyruvate--protein phosphotransferase sce4211 1 None None None 162456849 Common - ABC transporter ATP-binding protein sce8566 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 162449811 Nonpathogen - hypothetical protein sce1540 1 None None None 162452663 Nonpathogen - hypothetical protein sce4387 1 None None None 162450125 Nonpathogen - hypothetical protein sce1854 1 None None None 162455549 Common ribA4 Riboflavin biosynthesis protein sce7267 230 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 162457486 Common - hypothetical protein sce9200 62 None None None 162449968 Common - Putative pterin-4-alpha-carbinolamine dehydratase sce1698 82 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 162455280 Common - ECF-family RNA polymerase sigma factor sce6998 33 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162451477 Nonpathogen - hypothetical protein sce3205 1 None None None 162455867 Common hmoA molybdopterin oxidoreductase, iron-sulfur binding subunit sce7585 138 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 162456424 Common - conserved hypothetical protein, Rhs element family sce8141 59 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162448425 Nonpathogen - putative secreted protein sce0155 1 None None None 162457479 Common - Putative dehydrogenase sce9193 175 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 162451155 Common - hypothetical protein sce2883 9 COG3930 COG3930, Uncharacterized protein conserved in bacteria Function unknown 162452820 Common - putative Hollyday junction resolvase sce4544 60 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 162455906 Common folP Dihydropteroate synthase sce7624 214 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 162454774 Common - Protein kinase sce6492 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455213 Nonpathogen - hypothetical protein sce6931 1 None None None 162452597 Common mvaB Hydroxymethylglutaryl-CoA lyase sce4321 202 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 162448295 Common lnt hypothetical protein sce0026 142 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 162449456 Common - hypothetical protein sce1186 11 None None None 162453016 Nonpathogen - hypothetical protein sce4740 2 None None None 162451673 Common - IstB-like ATP-binding protein sce3401 33 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 162449146 Common - hypothetical protein sce0876 124 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162449729 Common - probable 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase sce1458 144 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162452235 Common - hypothetical protein sce3962 8 None None None 162457131 Common - transcriptional regulator, ArsR family sce8846 60 COG0640 ArsR, Predicted transcriptional regulators Transcription 162452717 Common - putative regulatory protein sce4441 174 COG0714 COG0714, MoxR-like ATPases General function prediction only 162456244 Nonpathogen - putative secreted protein sce7961 1 None None None 162452098 Common fadD1 putative Long-chain-fatty-acid-CoA ligase sce3825 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162451090 Common - putative Nucleoside-triphosphatase sce2818 70 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 162455692 Common - RNA-binding region RNP-1 (RNA recognition motif) sce7410 66 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 162449925 Nonpathogen - hypothetical membrane-associated protein sce1654 3 None None None 162457396 Nonpathogen - hypothetical protein sce9111 1 None None None 162454917 Common - ECF-family RNA polymerase sigma factor sce6635 95 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162449206 Common - hypothetical protein sce0936 63 COG3211 PhoX, Predicted phosphatase General function prediction only 162451761 Common nirB1 nitrite reductase sce3488 197 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 162455720 Nonpathogen - hypothetical protein sce7438 1 None None None 162457073 Nonpathogen - hypothetical protein sce8788 1 None None None 162455542 Common - hypothetical protein sce7260 9 None None None 162448674 Nonpathogen secE preprotein translocase, SecE subunit sce0404 1 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 162453736 Common - Collagen alpha 2(I) chain precursor sce5460 98 None None None 162451085 Common hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase sce2813 213 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 162457377 Nonpathogen - hypothetical protein sce9092 2 None None None 162455838 Nonpathogen - hypothetical protein sce7556 1 None None None 162456920 Common - hypothetical protein sce8637 9 None None None 162456690 Nonpathogen - hypothetical protein sce8407 1 None None None 162451465 Common - polyketide synthase sce3193 226 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162452917 Common cysK3 hypothetical protein sce4641 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162453815 Common - integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase) sce5539 92 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 162451055 Common pdeX 3',5'-cyclic-nucleotide phosphodiesterase sce2783 36 COG5212 PDE1, Low-affinity cAMP phosphodiesterase Signal transduction mechanisms 162448714 Common - transcriptional regulator, MarR family sce0444 17 COG1846 MarR, Transcriptional regulators Transcription 162456434 Common leuB3 3-isopropylmalate dehydrogenase sce8151 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 162449886 Nonpathogen - hypothetical protein sce1615 1 None None None 162449243 Nonpathogen - hypothetical protein sce0973 1 None None None 162456675 Common - hypothetical protein sce8392 3 None None None 162457347 Nonpathogen - putative secreted protein sce9062 1 None None None 162452364 Common - hypothetical protein sce4088 3 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162454918 Common - hypothetical protein sce6636 66 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 162451130 Common - ahpC/TSA family protein sce2858 131 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162452870 Nonpathogen - putative secreted protein sce4594 6 None None None 162453853 Nonpathogen - putative secreted protein sce5577 1 COG4907 COG4907, Predicted membrane protein Function unknown 162457505 Common gspD general secretion pahtway protein D sce9219 123 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 162455845 Common ndhA NADH dehydrogenase subunit 1 sce7563 189 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 162452059 Common dksA1 hypothetical protein sce3786 156 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 162454314 Common - Protein kinase sce6037 144 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453344 Common fecA TonB-dependent receptor protein sce5068 29 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162448392 Common cypA1 Cytochrome P450 CYP109C1 sce0122 74 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 162450812 Common - hypothetical protein sce2540 101 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 162452335 Nonpathogen - hypothetical protein sce4061 1 None None None 162453502 Nonpathogen - hypothetical protein sce5226 1 None None None 162456956 Nonpathogen - hypothetical protein sce8673 1 None None None 162448400 Nonpathogen - hypothetical protein sce0130 6 COG1714 COG1714, Predicted membrane protein/domain Function unknown 162448561 Common omt O-methyltransferase sce0292 113 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 162451581 Common araD L-ribulose-phosphate 4-epimerase sce3309 130 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 162457060 Nonpathogen - hypothetical protein sce8775 1 None None None 162455782 Common - hypothetical protein sce7500 2 COG1848 COG1848, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 162450823 Common phnA probable phosphonoacetate hydrolase sce2551 12 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 162456953 Nonpathogen - carboxyl-terminal processing protease sce8670 12 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 162452910 Common - anti-anti sigma factor protein sce4634 33 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162457213 Nonpathogen - hypothetical protein sce8928 1 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 162452824 Common - two-component hybrid sensor and regulator sce4548 215 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162454227 Nonpathogen - hypothetical protein sce5950 2 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 162449542 Common - hypothetical protein sce1271 5 None None None 162452474 Common - hypothetical protein sce4198 12 None None None 162455805 Nonpathogen - hypothetical protein sce7523 1 None None None 162455593 Nonpathogen - hypothetical protein sce7311 1 None None None 162455917 Nonpathogen - hypothetical protein sce7635 2 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 162451152 Common bioF1 8-amino-7-oxononanoate synthase sce2880 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 162454025 Common - Protein kinase sce5749 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456085 Common - OmpA domain protein sce7803 152 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162454049 Common icd1 Isocitrate dehydrogenase sce5773 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 162448865 Common - hypothetical protein sce0595 75 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162451217 Common pstC phosphate ABC transporter, permease protein PstC sce2945 224 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 162455132 Nonpathogen - hypothetical protein sce6850 1 None None None 162451789 Common - Rhs family protein sce3516 72 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162449513 Common - put. Tagaturonate reductase sce1243 68 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 162452105 Nonpathogen - procollagen, type XI, alpha sce3832 1 None None None 162449090 Common - polyketide synthase sce0820 208 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162450064 Common - hypothetical protein sce1793 43 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 162457344 Common nuoB2 NADH dehydrogenase (ubiquinone) sce9059 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 162449435 Common - hypothetical protein sce1165 13 None None None 162449736 Common acpP1 hypothetical protein sce1465 99 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162450659 Common - non-ribosomal peptide synthetase sce2387 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 162451750 Nonpathogen - hypothetical protein sce3477 6 None None None 162452953 Common - Protein kinase sce4677 162 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454659 Nonpathogen - hypothetical protein sce6379 1 None None None 162453213 Common - hypothetical 19.5 kD protein in emrE-rus intergenic region sce4937 83 COG1881 COG1881, Phospholipid-binding protein General function prediction only 162450804 Common - hypothetical protein sce2532 7 COG3225 GldG, ABC-type uncharacterized transport system involved in gliding motility, auxiliary component Cell motility and secretion 162453723 Nonpathogen - putative secreted protein sce5447 1 None None None 162455901 Nonpathogen lamB maltoporin precursor sce7619 1 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 162451188 Common - hypothetical protein sce2916 30 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 162455226 Nonpathogen - hypothetical protein sce6944 1 None None None 162450600 Common - Hypothetical acetyltransferase MJ1207 sce2328 47 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 162456649 Nonpathogen - hypothetical protein sce8366 1 COG4907 COG4907, Predicted membrane protein Function unknown 162454656 Nonpathogen - small hypothetical protein predicted by Glimmer/Critica sce6376 1 None None None 162457041 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III related protein sce8756 166 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 162449762 Nonpathogen - hypothetical protein sce1491 1 None None None 162456356 Common - hypothetical protein sce8074 31 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 162450299 Common - hypothetical protein sce2027 142 COG1354 COG1354, Uncharacterized conserved protein Function unknown 162451746 Common - hypothetical protein sce3473 65 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 162449397 Common - transcriptional regulator, ArsR family sce1127 82 COG0640 ArsR, Predicted transcriptional regulators Transcription 162450193 Common - tonB family protein sce1920 13 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162453598 Common nhoA putative N-hydroxyarylamine O-acetyltransferase sce5322 43 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 162454073 Common ylxP hypothetical protein sce5797 30 COG1550 COG1550, Uncharacterized protein conserved in bacteria Function unknown 162454301 Nonpathogen moeB2 molybdopterin biosynthesis protein sce6024 4 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 162456701 Common - hypothetical protein sce8418 6 None None None 162454855 Nonpathogen - hypothetical protein sce6573 1 None None None 162454794 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase sce6512 156 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 162454140 Common - hypothetical protein sce5864 211 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162453566 Nonpathogen - hypothetical protein sce5290 1 None None None 162455274 Nonpathogen - hypothetical protein sce6992 1 None None None 162453902 Common - leucine responsive regulatory protein sce5626 135 COG1522 Lrp, Transcriptional regulators Transcription 162455843 Nonpathogen - serine protease sce7561 1 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162451927 Common nikR putative transcriptional regulator, CopG family sce3654 52 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 162456996 Common - hypothetical protein sce8712 7 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 162451136 Nonpathogen - hypothetical protein sce2864 1 None None None 162449857 Nonpathogen - hypothetical protein sce1586 2 COG4907 COG4907, Predicted membrane protein Function unknown 162454647 Nonpathogen - hypothetical protein sce6367 1 None None None 162456142 Common - putative secreted protein sce7859 29 COG2968 COG2968, Uncharacterized conserved protein Function unknown 162452585 Common - hybrid sensory histidine kinase sce4309 162 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162453021 Nonpathogen - hypothetical protein sce4745 1 None None None 162450360 Nonpathogen - hypothetical protein sce2088 1 None None None 162449717 Nonpathogen - hypothetical protein sce1446 1 None None None 162457268 Nonpathogen - hypothetical protein sce8983 1 None None None 162452052 Common prkA1 Protein kinase sce3779 71 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 162456281 Nonpathogen - hypothetical protein sce7998 1 None None None 162451897 Nonpathogen - hypothetical protein sce3624 4 None None None 162453427 Nonpathogen - hypothetical protein sce5151 1 None None None 162454767 Nonpathogen - hypothetical protein sce6485 1 None None None 162448988 Nonpathogen - hypothetical protein sce0718 1 None None None 162450285 Common - glycine cleavage system protein H homologue sce2013 183 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 162451868 Common - transcription elongation factor GreA sce3595 204 COG0782 GreA, Transcription elongation factor Transcription 162454066 Common - putative ABC transporter, ATP-binding protein sce5790 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 162449013 Nonpathogen - hypothetical protein sce0743 1 None None None 162448445 Common - transcriptional regulator, IclR family sce0175 8 COG1414 IclR, Transcriptional regulator Transcription 162457498 Common gspJ putative general secretion pathway protein J sce9212 5 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 162452814 Nonpathogen - hypothetical protein sce4538 1 None None None 162455400 Common - hypothetical protein sce7118 2 COG3420 NosD, Nitrous oxidase accessory protein Inorganic ion transport and metabolism 162451957 Nonpathogen - hypothetical protein sce3684 1 None None None 162452350 Common - Protein kinase sce4074 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452807 Common - hypothetical protein sce4531 2 None None None 162452900 Common - hypothetical protein sce4624 187 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162454514 Nonpathogen - hypothetical protein sce6234 6 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 162451264 Nonpathogen - TolR-like protein sce2992 4 None None None 162455195 Nonpathogen - hypothetical protein sce6913 2 None None None 162454670 Common - transcriptional regulator, MarR family sce6390 30 COG1846 MarR, Transcriptional regulators Transcription 162455765 Common gph2 hypothetical protein sce7483 163 COG0546 Gph, Predicted phosphatases General function prediction only 162450298 Common - Protein kinase sce2026 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452853 Common hypA hydrogenase nickel insertion protein HypA,putative sce4577 59 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 162454179 Common - hypothetical protein sce5902 49 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 162450924 Nonpathogen - hypothetical protein sce2652 1 None None None 162454888 Nonpathogen - hypothetical protein sce6606 1 None None None 162457086 Common - Acyl-CoA dehydrogenase sce8801 128 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 162452578 Common - ABC-type dipeptide transport system, periplasmic component sce4302 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 162449266 Common aguA hypothetical protein sce0996 15 COG3661 AguA, Alpha-glucuronidase Carbohydrate transport and metabolism 162452721 Common atpC1 H(+)-transporting two-sector ATPase sce4445 73 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 162457493 Common - hypothetical protein sce9207 53 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162452325 Common - recombinase sce4051 32 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 162452982 Common - molybdopterin oxidoreductase, membrane subunit sce4706 34 COG5557 COG5557, Polysulphide reductase Energy production and conversion 162457172 Common - Protein kinase sce8887 218 COG3899 COG3899, Predicted ATPase General function prediction only 162449963 Nonpathogen - hypothetical protein sce1692 2 None None None 162453654 Common - hypothetical protein sce5378 6 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 162454565 Common - transposase sce6285 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162450033 Nonpathogen - GAF domain protein sce1762 9 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 162457104 Common - hypothetical protein sce8819 26 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 162454787 Common - hypothetical protein sce6505 50 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 162457351 Common - hypothetical protein sce9066 42 COG1944 COG1944, Uncharacterized conserved protein Function unknown 162449842 Common pdhA Pyruvate dehydrogenase (acetyl-transferring) sce1571 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 162457067 Common cysB cystathionine beta-synthase sce8782 229 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 162452934 Nonpathogen - hypothetical protein sce4658 1 None None None 162456840 Common glpX Fructose-bisphosphatase sce8557 18 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 162448667 Common hisIE hypothetical protein sce0397 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 162455759 Common - hypothetical protein sce7477 36 None None None 162456297 Common - predicted CBS domain sce8014 141 COG0517 COG0517, FOG: CBS domain General function prediction only 162450798 Common - 3-oxoacyl-[acyl-carrier-protein] synthase sce2526 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162448849 Common - transcriptional regulator, MerR family sce0579 53 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 162455996 Nonpathogen - conserved secreted protein sce7714 7 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 162448791 Nonpathogen - hypothetical protein sce0521 1 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 162451336 Common - Alpha amylase, catalytic region sce3064 180 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 162451373 Common - ABC transporter, nucleotide binding/ATPase protein sce3101 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 162453999 Nonpathogen - hypothetical protein sce5723 1 None None None 162452481 Common mvk hypothetical protein sce4205 6 COG1577 ERG12, Mevalonate kinase Lipid metabolism 162454927 Common - hypothetical protein sce6645 9 None None None 162454982 Common - hypothetical protein sce6700 52 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 162456624 Nonpathogen - hypothetical protein sce8340 1 None None None 162456734 Common - transposase sce8451 7 None None None 162452314 Nonpathogen - putative secreted protein sce4040 1 None None None 162448411 Common - hypothetical protein sce0141 57 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 162449220 Common - hypothetical protein sce0950 32 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 162454245 Nonpathogen - hypothetical protein sce5968 1 None None None 162455409 Common - Sigma-54 dependent transcriptional regulator sce7127 185 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162450161 Nonpathogen - hypothetical protein sce1890 1 None None None 162452690 Common - hypothetical isochorismatase family protein sce4414 134 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162450911 Common - hypothetical protein sce2639 8 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162451428 Nonpathogen - putative secreted protein sce3156 1 None None None 162453943 Common - hypothetical protein sce5667 52 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162456100 Nonpathogen rimI3 Ribosomal-protein-alanine N-acetyltransferase sce7818 6 COG0456 RimI, Acetyltransferases General function prediction only 162452784 Nonpathogen - dumpy sce4508 2 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162451890 Nonpathogen - hypothetical protein sce3617 2 None None None 162456688 Nonpathogen - hypothetical protein sce8405 1 None None None 162455326 Nonpathogen - hypothetical protein sce7044 1 None None None 162450163 Nonpathogen - hypothetical protein sce1892 1 None None None 162455476 Common - Protein kinase sce7194 139 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162456109 Nonpathogen - hypothetical protein sce7827 1 None None None 162457441 Common - putative hydrolase sce9155 202 COG0388 COG0388, Predicted amidohydrolase General function prediction only 162449366 Common - cell wall surface anchor family protein sce1096 57 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 162453674 Common - hypothetical protein sce5398 10 None None None 162457630 Common - hypothetical protein sce9344 44 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 162452749 Common - transposase, IS4 family sce4473 27 None None None 162452818 Common rpsO 30S ribosomal protein S15 sce4542 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 162455433 Common - serine protease sce7151 14 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162455510 Common - hypothetical protein sce7228 176 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 162455810 Common - oxidoreductase sce7528 185 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162454166 Nonpathogen - Putative Iron-regulated protein A precursor sce5890 3 COG3489 COG3489, Predicted periplasmic lipoprotein General function prediction only 162452077 Common - putative ATP/GTP-binding protein sce3804 11 None None None 162450307 Common trxA1 thioredoxin sce2035 230 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162456005 Nonpathogen - hypothetical protein sce7723 2 None None None 162452185 Nonpathogen - putative septum formation initiator protein sce3912 1 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 162455004 Common - insecticidal toxin complex-like protein sce6722 68 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162453157 Nonpathogen - hypothetical protein sce4881 1 None None None 162449470 Common - hypothetical protein sce1200 17 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162450066 Common - hypothetical protein sce1795 35 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162456746 Common - Protein kinase sce8463 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162455773 Nonpathogen - hypothetical protein sce7491 10 None None None 162453454 Common hemY1 hypothetical protein sce5178 9 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 162455862 Nonpathogen - hypothetical protein sce7580 6 None None None 162449734 Nonpathogen - hypothetical protein sce1463 10 None None None 162456748 Common - hypothetical protein sce8465 15 None None None 162451826 Common - putative simple sugar transport system permease protein sce3553 76 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 162451539 Nonpathogen - hypothetical protein sce3267 1 None None None 162452795 Common - hypothetical protein sce4519 24 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 162456107 Common - hypothetical protein sce7824 22 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162448898 Nonpathogen - hypothetical protein sce0628 1 None None None 162450814 Nonpathogen - hypothetical protein sce2542 1 None None None 162455069 Common - hypothetical protein sce6787 6 None None None 162456462 Common - probable thioesterase sce8179 132 COG0824 FcbC, Predicted thioesterase General function prediction only 162454838 Nonpathogen - hypothetical protein sce6556 5 None None None 162449453 Nonpathogen - hypothetical protein sce1183 4 COG5373 COG5373, Predicted membrane protein Function unknown 162454102 Nonpathogen - hypothetical protein sce5826 2 None None None 162455746 Common - hypothetical protein sce7464 22 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162451900 Common - transcriptional regulator, AraC family sce3627 16 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454330 Nonpathogen - hypothetical protein sce6053 1 COG3219 COG3219, Uncharacterized protein conserved in bacteria Function unknown 162452583 Common - hypothetical protein sce4307 18 COG4539 COG4539, Predicted membrane protein Function unknown 162454200 Common - hypothetical protein sce5923 5 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162449849 Common - hypothetical protein sce1578 41 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 162450532 Common - putative secreted protein sce2260 35 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 162450581 Common - hypothetical protein sce2309 22 None None None 162451549 Common - putative Esterase sce3277 22 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 162452297 Common - putative uricase sce4023 14 COG3648 COG3648, Uricase (urate oxidase) Secondary metabolites biosynthesis, transport, and catabolism 162456791 Nonpathogen - hypothetical protein sce8508 1 None None None 162456038 Common - uncharacterized ABC-type transport system,permease component sce7756 106 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 162455660 Nonpathogen - hypothetical protein sce7378 12 COG2454 COG2454, Uncharacterized conserved protein Function unknown 162456736 Common - serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member sce8453 30 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 162451633 Nonpathogen - hypothetical protein sce3361 1 None None None 162456994 Common czcB2 heavy metal efflux pump, CzcB family sce8710 82 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 162448884 Nonpathogen - putative secreted protein sce0614 2 None None None 162457406 Nonpathogen - hypothetical protein sce9120 1 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 162453541 Common - Beta-lactamase sce5265 70 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 162451562 Nonpathogen - hypothetical protein sce3290 6 COG5592 COG5592, Uncharacterized conserved protein Function unknown 162457081 Common - two-component response regulator sce8796 13 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 162451178 Nonpathogen - hypothetical protein sce2906 3 None None None 162452762 Common infC translation initiation factor IF-3 sce4486 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 162451426 Common - hypothetical protein sce3154 35 None None None 162451024 Common - hypothetical protein sce2752 94 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 162453529 Nonpathogen - putative secreted protein sce5253 3 COG4260 COG4260, Putative virion core protein (lumpy skin disease virus) Function unknown 162452229 Nonpathogen - hypothetical protein sce3956 1 None None None 162457036 Common - putative protease sce8751 4 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162449248 Common - putative Oxidoreductase sce0978 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162453710 Nonpathogen - hypothetical protein sce5434 2 None None None 162455067 Common - hypothetical protein sce6785 102 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162448787 Common - hypothetical protein sce0517 22 None None None 162453779 Common - patatin like phospholipase sce5503 39 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 162454645 Nonpathogen - hypothetical protein sce6365 1 None None None 162453087 Nonpathogen - hypothetical protein sce4811 1 None None None 162455338 Common - Protein of unknown function DUF820 sce7056 26 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162452243 Common lhr2 putative ATP-dependent helicase sce3970 141 COG1201 Lhr, Lhr-like helicases General function prediction only 162454833 Common ureG urease accessory protein G sce6551 133 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 162450198 Nonpathogen - hypothetical protein sce1926 1 None None None 162450440 Common dha Haloalkane dehalogenase sce2168 73 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 162456362 Common - molecular chaperone, Hsp70 family sce8079 103 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162456894 Nonpathogen - hypothetical protein sce8611 1 None None None 162456916 Common pepN3 Aminopeptidase sce8633 169 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 162454695 Nonpathogen - hypothetical protein sce6415 2 None None None 162455719 Nonpathogen - hypothetical protein sce7437 2 None None None 162453522 Common - hypothetical protein sce5246 211 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162448317 Common - enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase sce0048 161 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 162450041 Nonpathogen - hypothetical protein sce1770 1 None None None 162448941 Common - probable oxidoreductase/voltage-gated potassium channel beta-1 subunit (K+ channel beta-1 subunit) (Kv-beta-1) sce0671 189 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162455344 Common - TonB-dependent receptor sce7062 45 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162448993 Common - two-component hybrid sensor and regulator sce0723 221 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 162449624 Common kdpB Potassium-transporting ATPase B chain sce1353 230 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 162454781 Nonpathogen - TPR domain hypothetical protein sce6499 2 None None None 162449195 Nonpathogen - hypothetical protein sce0925 1 None None None 162453789 Common - hypothetical protein sce5513 33 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 162453994 Nonpathogen - hypothetical protein sce5718 1 None None None 162456469 Nonpathogen - PE_PGRS family protein sce8186 1 COG4907 COG4907, Predicted membrane protein Function unknown 162448641 Common - conserved secreted protein, lemA family sce0371 131 COG1704 LemA, Uncharacterized conserved protein Function unknown 162450558 Nonpathogen - hypothetical protein sce2286 1 None None None 162453743 Common - hypothetical protein sce5467 85 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162456386 Nonpathogen - hypothetical protein sce8103 1 None None None 162449647 Common dsbA DSBA oxidoreductase sce1376 87 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162450538 Common - hypothetical protein sce2266 124 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 162449345 Nonpathogen - hypothetical protein sce1075 1 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 162452786 Common - putative Glutathione S-transferase sce4509 2 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162451106 Common mopB2 hypothetical protein sce2834 144 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162453672 Common - hypothetical protein sce5396 134 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162456909 Common - FHA domain protein sce8626 185 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162453614 Common - Protein kinase sce5338 135 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448920 Nonpathogen tolR1 putative transport transmembrane protein sce0650 1 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 162455269 Common - hypothetical protein sce6987 20 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 162449200 Nonpathogen dnaZ DNA-directed RNA polymerase sce0930 1 None None None 162450220 Common - hypothetical protein sce1948 178 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162452144 Common - hypothetical protein sce3871 29 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162449894 Nonpathogen - hypothetical protein sce1623 1 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 162457090 Common - hypothetical protein sce8805 97 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 162457228 Common oruR2 transcriptional regulator, AraC family sce8943 59 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162451232 Common - Protein kinase sce2960 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162453951 Nonpathogen - hypothetical protein sce5675 1 None None None 162453680 Nonpathogen - hypothetical protein sce5404 1 None None None 162450675 Common moaB molybdenum cofactor biosynthesis protein B,putative sce2403 186 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 162449796 Common - hypothetical protein sce1525 97 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 162455046 Common - anti-anti sigma factor protein sce6764 39 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162452975 Common manA Mannose-6-phosphate isomerase sce4699 41 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 162455459 Common - hypothetical protein sce7177 20 COG4717 COG4717, Uncharacterized conserved protein Function unknown 162457043 Common - hypothetical protein sce8758 12 COG5635 COG5635, Predicted NTPase (NACHT family) Signal transduction mechanisms 162453585 Common - putative glycosyl hydrolase sce5309 19 None None None 162454593 Common yndB hypothetical protein sce6313 24 COG3832 COG3832, Uncharacterized conserved protein Function unknown 162457138 Nonpathogen - putative secreted protein sce8853 1 None None None 162453721 Common - Protein kinase sce5445 229 COG3899 COG3899, Predicted ATPase General function prediction only 162453106 Common - Protein of unknown function DUF1255 sce4830 52 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 162454803 Common - posible heat shock protein sce6521 6 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 162455259 Common - putative 5-formyltetrahydrofolate cyclo-ligase sce6977 168 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 162456369 Common - two-component sensor kinase sce8086 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162452992 Nonpathogen - hypothetical protein sce4716 2 None None None 162448274 Common argD Acetylornithine aminotransferase sce0005 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 162449389 Common - hypothetical protein sce1119 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162454545 Nonpathogen - hypothetical protein sce6265 2 None None None 162456880 Common uvrA4 excinuclease ABC subunit A sce8597 238 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 162448802 Common - putative peptidase sce0532 104 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 162449783 Nonpathogen - hypothetical protein sce1512 1 None None None 162457413 Common - conserved carbohydrate-binding protein, Rhs family sce9127 71 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162453080 Nonpathogen - hypothetical protein sce4804 1 None None None 162452999 Nonpathogen - hypothetical protein sce4723 1 None None None 162453140 Common - ECF-family RNA polymerase sigma factor sce4864 132 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162457433 Nonpathogen - hypothetical protein sce9147 2 None None None 162451033 Common - two-component sensor histidine kinase sce2761 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 162450260 Nonpathogen - hypothetical protein sce1988 1 None None None 162452706 Common rpmB 50S ribosomal protein L28 sce4430 96 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 162456318 Common - hypothetical protein sce8035 2 None None None 162450249 Common - hypothetical protein sce1977 3 None None None 162448947 Common - hypothetical protein sce0677 3 COG0622 COG0622, Predicted phosphoesterase General function prediction only 162453984 Nonpathogen - hypothetical protein sce5708 2 None None None 162448469 Nonpathogen - hypothetical protein sce0199 1 None None None 162449405 Common modA ABC-type molybdate transporter, substrate-binding protein sce1135 116 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 162457006 Nonpathogen - possible two component sensor kinase sce8722 1 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162449805 Common - transcriptional regulator, ArsR family sce1534 9 None None None 162453387 Nonpathogen - hypothetical protein sce5111 1 None None None 162448395 Common yagH Beta-xylosidase (14-beta-D-xylan xylohydrolase) (Xylan 14-beta-xylosidase) sce0125 41 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 162453616 Common - Protein kinase sce5340 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452276 Common - permease of the major facilitator superfamily sce4003 46 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 162453228 Common - Protein kinase sce4952 134 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454216 Nonpathogen - hypothetical protein sce5939 2 None None None 162451854 Nonpathogen - hypothetical protein sce3581 2 None None None 162452967 Common - hypothetical protein sce4691 13 COG5036 COG5036, SPX domain-containing protein involved in vacuolar polyphosphate accumulation Inorganic ion transport and metabolism 162456025 Common - putative RNA polymerase sigma factor sce7743 7 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455113 Nonpathogen - hypothetical protein sce6831 1 None None None 162456500 Nonpathogen - hypothetical protein sce8217 1 None None None 162452448 Common - DNA-binding protein sce4172 26 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 162448572 Nonpathogen - hypothetical protein sce0302 3 None None None 162456669 Common - putative [Acyl-carrier-protein] phosphodiesterase. sce8386 92 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 162449419 Common narB1 Ferredoxin--nitrate reductase sce1149 186 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 162452069 Common - FKBP-type peptidyl-prolyl cis-trans isomerase sce3796 154 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 162453890 Common arsC2 Arsenate reductase (glutaredoxin) sce5614 88 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 162453915 Nonpathogen - putative secreted protein sce5639 3 COG4907 COG4907, Predicted membrane protein Function unknown 162451448 Common gatA3 putative amidase sce3176 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 162452674 Common - hypothetical protein sce4398 17 None None None 162450229 Nonpathogen - hypothetical protein sce1957 1 None None None 162448377 Common - hypothetical protein sce0107 45 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162450611 Common - hypothetical protein sce2339 39 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 162456191 Common rluD4 hypothetical protein sce7908 165 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 162451532 Common trkA1 potassium uptake system protein, TrkA-family sce3260 122 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 162449727 Common - hypothetical protein sce1456 7 None None None 162451255 Common apt putative Adenine phosphoribosyltransferase sce2983 165 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 162449778 Common - hypothetical protein sce1507 15 COG4262 COG4262, Predicted spermidine synthase with an N-terminal membrane domain General function prediction only 162455252 Nonpathogen - hypothetical protein sce6970 4 None None None 162455260 Common mscL large conductance mechanosensitive channel sce6978 139 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 162455291 Common - sigma-54 dependent transcriptional regulator sce7009 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162453961 Common - Probable serine protease sce5685 17 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162456067 Nonpathogen - hypothetical protein sce7785 1 None None None 162448778 Nonpathogen - hypothetical protein sce0508 1 None None None 162454412 Common - ECF-family RNA polymerase sigma factor sce6133 41 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162452286 Common - probable cation-transporting ATPase sce4013 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 162456276 Nonpathogen - putative secreted protein sce7993 2 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162457576 Common - hypothetical protein sce9290 55 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162452894 Common - Peroxiredoxin (AhpC/TSA family) sce4618 230 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162456512 Nonpathogen - hypothetical protein sce8229 1 None None None 162449048 Common hylB hypothetical protein sce0778 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 162453006 Nonpathogen - hypothetical protein sce4730 1 None None None 162452938 Nonpathogen - hypothetical protein sce4662 1 None None None 162451723 Common - LysR-family transcriptional regulator sce3450 165 COG0583 LysR, Transcriptional regulator Transcription 162452644 Common - Protein kinase sce4368 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162457236 Common - transcriptional regulator, LysR family sce8950 159 COG0583 LysR, Transcriptional regulator Transcription 162457402 Common - pseudogene sce_pseudo_16 2 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 162450122 Common - Protein kinase sce1851 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162451714 Common - hypothetical protein sce3442 37 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 162448460 Common - RNA polymerase sigma factor sce0190 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162454172 Nonpathogen - hypothetical protein sce5896 1 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 162455582 Nonpathogen - hypothetical protein sce7300 1 COG4662 TupA, ABC-type tungstate transport system, periplasmic component Coenzyme metabolism 162449376 Common - hypothetical protein sce1106 35 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 162451884 Common rsbT2 positive regulator of sigma-B activity (switch protein/serine-threonine kinase) sce3611 35 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 162453380 Nonpathogen - hypothetical protein sce5104 8 COG2524 COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains Transcription 162449934 Common ftsW cell division protein sce1663 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 162456936 Nonpathogen - hypothetical protein sce8653 1 None None None 162454766 Common pp2c12 Phosphoprotein phosphatase sce6484 158 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 162457550 Common - put. Extracellular solute-binding protein sce9264 88 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162448883 Common - putative ABC transporter permease protein sce0613 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 162451773 Nonpathogen - hypothetical protein sce3500 1 None None None 162450156 Common - hypothetical protein sce1885 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 162448307 Common - Protein kinase sce0038 158 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162449744 Common - hypothetical protein sce1473 10 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 162456642 Common - hypothetical protein sce8359 14 None None None 162456835 Common geoA putative terpene cyclase sce8552 12 None None None 162449223 Common - putative ATPase sce0953 42 COG4637 COG4637, Predicted ATPase General function prediction only 162454026 Nonpathogen - hypothetical protein sce5750 1 None None None 162448626 Common - thioesterase sce0356 51 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 162454430 Common - ECF-family RNA polymerase sigma factor sce6150 5 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162448644 Common - putative peptidyl-prolyl cis-trans isomerase sce0374 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 162452772 Nonpathogen - hypothetical protein sce4496 1 None None None 162452885 Common - anti-anti sigma factor protein sce4609 70 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 162451472 Nonpathogen - hypothetical protein sce3200 1 None None None 162453026 Nonpathogen - hypothetical protein sce4750 1 None None None 162450570 Nonpathogen - hypothetical protein sce2297 2 None None None 162457293 Nonpathogen - putative secreted protein sce9008 1 None None None 162454300 Common - hypothetical protein sce6023 79 COG0778 NfnB, Nitroreductase Energy production and conversion 162457559 Nonpathogen - hypothetical protein sce9273 1 None None None 162455972 Common - hypothetical protein sce7690 23 COG3391 COG3391, Uncharacterized conserved protein Function unknown 162451210 Common moaD Molybdopterin converting factor, subunit 1:MoaD sce2938 20 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 162450748 Common aroE3 Shikimate dehydrogenase sce2476 100 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 162455035 Common galA Arabinogalactan endo-1,4-beta-galactosidase sce6753 20 COG3867 COG3867, Arabinogalactan endo-1,4-beta-galactosidase Carbohydrate transport and metabolism 162455495 Common - Ribosomal-protein-serine acetyltransferase sce7213 134 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 162448534 Common moaA2 hypothetical protein sce0264 17 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 162456479 Common - Putative Rhs element Vgr protein sce8196 58 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 162453564 Nonpathogen - hypothetical protein sce5288 1 None None None 162457148 Nonpathogen - hypothetical protein sce8863 1 None None None 162456741 Common - hypothetical protein sce8458 158 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162449981 Nonpathogen - hypothetical protein sce1710 1 None None None 162448719 Common - hypothetical protein sce0449 72 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 162453971 Common mukE Chromosome partition protein mukE. sce5695 20 COG3095 MukE, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 162453802 Nonpathogen - hypothetical protein sce5526 1 None None None 162456070 Common xerC integrase/recombinase sce7788 220 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 162455754 Common - hypothetical protein sce7472 40 COG0398 COG0398, Uncharacterized conserved protein Function unknown 162456330 Common - hypothetical protein sce8047 6 COG3670 COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 162451752 Common - transcriptional regulator, TetR family sce3479 57 COG1309 AcrR, Transcriptional regulator Transcription 162455404 Nonpathogen - hypothetical protein sce7122 3 None None None 162455153 Common - hypothetical protein sce6871 6 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162454117 Common - putative N6-adenine DNA/RNA methylase sce5841 133 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 162453627 Common celC Cellulase sce5351 16 COG2730 BglC, Endoglucanase Carbohydrate transport and metabolism 162450655 Nonpathogen - hypothetical protein sce2383 1 None None None 162449869 Common cheR1 chemotaxis protein methyltransferase CheR sce1598 150 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162450646 Common - hypothetical protein sce2374 5 None None None 162455531 Common - putative MglA1 protein sce7249 20 COG2229 COG2229, Predicted GTPase General function prediction only 162449777 Nonpathogen - putative secreted protein sce1506 1 None None None 162456471 Common - Putative acetyltransferase sce8188 13 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 162449544 Common fusA3 Elongation factor (EF sce1273 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 162453633 Common - conserved hypothetical protein containing the kelch-motif sce5357 21 COG3055 COG3055, Uncharacterized protein conserved in bacteria Function unknown 162455613 Common - hypothetical protein sce7331 162 COG0316 IscA, Uncharacterized conserved protein Function unknown 162455915 Nonpathogen - hypothetical protein sce7633 1 None None None 162451285 Common menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase sce3013 88 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 162457562 Nonpathogen - DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog sce9276 4 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162450253 Common - hypothetical protein sce1981 85 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 162451063 Common - sensor histidine kinase sce2791 205 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 162453449 Common - Protein kinase sce5173 154 COG3899 COG3899, Predicted ATPase General function prediction only 162454642 Common - transcriptional regulator, AraC family sce6362 107 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162454382 Common - transposase sce6105 58 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162451870 Common - sigma-54 dependent DNA-binding response regulator sce3597 173 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162457535 Common - ECF-family RNA polymerase sigma factor sce9249 8 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162449035 Nonpathogen - hypothetical protein sce0765 1 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 162451237 Common - hypothetical protein sce2965 190 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 162453665 Nonpathogen - hypothetical protein sce5389 4 None None None 162454000 Common tpx thiol peroxidase sce5724 121 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162448805 Nonpathogen - hypothetical protein sce0535 2 None None None 162449765 Common - Protein kinase sce1494 225 COG3899 COG3899, Predicted ATPase General function prediction only 162457569 Nonpathogen - hypothetical protein sce9283 2 None None None 162456900 Nonpathogen - hypothetical protein sce8617 1 None None None 162453001 Nonpathogen - hypothetical protein sce4725 1 None None None 162453966 Common - FHA domain protein sce5690 13 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 162451583 Common araB Ribulokinase sce3311 99 COG1069 AraB, Ribulose kinase Energy production and conversion 162457512 Nonpathogen - hypothetical protein sce9226 3 COG5031 COQ4, Uncharacterized protein involved in ubiquinone biosynthesis Coenzyme metabolism 162448712 Common - Serine-pyruvate aminotransferase sce0442 153 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 162453266 Common mltD3 transglycosylase, Slt family sce4990 132 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 162451831 Common glxK hypothetical protein sce3558 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 162450525 Common yafJ putative amidotransferase sce2253 65 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 162454080 Nonpathogen - putative outer membrane protein sce5804 3 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 162454868 Common aceF2 Dihydrolipoyllysine-residue acetyltransferase sce6586 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 162453642 Nonpathogen - hypothetical protein sce5366 1 None None None 162454619 Nonpathogen - hypothetical protein sce6339 1 None None None 162454749 Nonpathogen - hypothetical protein sce6467 1 None None None 162449303 Common plsC2 1-acylglycerol-3-phosphate O-acyltransferase sce1033 65 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 162452496 Common nuoL1 NADH dehydrogenase (ubiquinone) sce4220 205 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 162452731 Nonpathogen - BKRF1 encodes EBNA-1 protein, latent cycle gene sce4455 1 None None None 162449401 Common - hypothetical protein sce1131 17 COG2405 COG2405, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 162453656 Nonpathogen - Thiamine pyridinylase sce5380 3 None None None 162449943 Common - hypothetical protein sce1672 42 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 162451252 Common - hypothetical protein sce2980 71 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 162450517 Nonpathogen - hypothetical protein sce2245 4 None None None 162450607 Common rarD RarD protein sce2335 103 COG2962 RarD, Predicted permeases General function prediction only 162450900 Nonpathogen - putative secreted protein sce2628 1 None None None 162456536 Common - hypothetical protein sce8253 4 None None None 162450705 Nonpathogen - hypothetical protein sce2433 1 None None None 162456874 Nonpathogen - hypothetical protein sce8591 1 None None None 162453122 Common - hypothetical protein sce4846 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 162449261 Common - dehydrogenase with different specifities sce0991 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 162450685 Common - gliding motility protein sce2413 18 COG2229 COG2229, Predicted GTPase General function prediction only 162454365 Nonpathogen - hypothetical protein sce6088 1 None None None 162452678 Common pyrD hypothetical protein sce4402 187 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 162449915 Common - RNA polymerase sigma factor sce1644 8 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 162449862 Nonpathogen - hypothetical protein sce1591 8 None None None 162449563 Nonpathogen - putative secreted protein sce1292 1 COG5373 COG5373, Predicted membrane protein Function unknown 162454534 Common - hypothetical protein sce6254 56 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 162454095 Nonpathogen - hypothetical protein sce5819 1 None None None 162450907 Nonpathogen - hypothetical protein sce2635 1 None None None 162455879 Common - putative two component system response regulator sce7597 190 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 162453772 Common - hypothetical protein sce5496 8 COG3652 COG3652, Predicted outer membrane protein Function unknown 162448522 Common - hypothetical protein sce0252 39 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 162450988 Common mcm Methylmalonyl-CoA mutase sce2716 110 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 162455465 Common folB hypothetical protein sce7183 39 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 162454047 Common - hypothetical protein sce5771 13 None None None 162449607 Common - hypothetical protein sce1336 7 None None None 162456497 Common - hypothetical protein sce8214 39 COG0434 SgcQ, Predicted TIM-barrel enzyme General function prediction only 162449328 Common - hypothetical protein sce1058 37 COG4637 COG4637, Predicted ATPase General function prediction only 162451432 Nonpathogen - hypothetical protein sce3160 1 None None None 162449126 Common - tetratricopeptide repeat protein sce0856 98 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162452608 Nonpathogen - hypothetical protein sce4332 1 None None None 162449491 Common - hypothetical protein sce1221 109 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455798 Nonpathogen - hypothetical protein sce7516 1 None None None 162454957 Common - Protein kinase sce6675 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450834 Nonpathogen - hypothetical protein sce2562 1 None None None 162456115 Nonpathogen - putative secreted protein sce7832 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 162450322 Common - sensor histidine kinase sce2050 172 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162449501 Common - Putative HTH-type transcriptional regulator betl 5'region. sce1231 52 COG1309 AcrR, Transcriptional regulator Transcription 162455245 Common - hypothetical protein sce6963 37 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 162452151 Common - putative outer membrane protein sce3878 56 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 162456344 Nonpathogen - hypothetical protein sce8061 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 162453713 Common - putative erythromycin esterase sce5437 34 COG2312 COG2312, Erythromycin esterase homolog General function prediction only 162457587 Common folE putative GTP cyclohydrolase I sce9301 169 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 162449185 Nonpathogen - hypothetical protein sce0915 1 None None None 162455991 Nonpathogen - hypothetical protein sce7709 1 None None None 162455707 Common nadA quinolinate synthetase sce7425 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 162448771 Nonpathogen - hypothetical protein sce0501 12 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162453253 Common queA2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase sce4977 180 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 162457528 Common - Alanyl-tRNA synthetase, probable sce9242 53 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 162450201 Common - Putative protease I precursor sce1929 10 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162454731 Common - putative transcriptional regulator sce6449 27 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 162454524 Nonpathogen - hypothetical protein sce6244 1 None None None 162449118 Common - Protein kinase sce0848 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450933 Common cheR3 Chemotaxis protein methyltransferase 2 sce2661 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 162450632 Nonpathogen - hypothetical protein sce2360 1 None None None 162453546 Common - hypothetical protein sce5270 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 162452127 Common - hypothetical protein sce3854 5 None None None 162456269 Nonpathogen - none sce7987 1 None None None 162455943 Common - Protein kinase sce7661 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450817 Common lipB putative lipoate-protein ligase B sce2545 168 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 162454844 Nonpathogen - hypothetical protein sce6562 1 None None None 162456204 Common rpmA 50S ribosomal protein L27 sce7921 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 162452534 Common - hypothetical protein sce4258 92 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 162450011 Common - hypothetical protein sce1740 34 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 162454307 Nonpathogen - hypothetical protein sce6030 1 None None None 162452391 Nonpathogen - hypothetical protein sce4115 1 None None None 162449462 Nonpathogen - hypothetical protein sce1192 2 COG0400 COG0400, Predicted esterase General function prediction only 162450244 Common aqpZ Aquaporin Z sce1972 129 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 162448613 Common - Peptidase T sce0343 123 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 162450741 Common - hypothetical protein sce2469 4 COG4850 COG4850, Uncharacterized conserved protein Function unknown 162454604 Common - Sigma-54 dependent transcriptional regulator sce6324 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 162456615 Nonpathogen - hypothetical protein sce8332 1 None None None 162451351 Nonpathogen - hypothetical protein sce3079 29 COG1628 COG1628, Uncharacterized conserved protein Function unknown 162451932 Nonpathogen - hypothetical protein sce3659 1 None None None 162448507 Common cobL Precorrin-6Y C(5,15)-methyltransferase (decarboxylating). sce0237 130 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 162451171 Common - SCO1/SenC family lipoprotein sce2899 90 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 162456567 Nonpathogen - hypothetical protein sce8284 7 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 162449508 Common - putative secreted protein sce1238 7 None None None 162450404 Nonpathogen - hypothetical protein sce2132 1 None None None 162452521 Common rnd hypothetical protein sce4245 72 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 162453276 Nonpathogen - hypothetical protein sce5000 1 None None None 162451645 Common - hypothetical protein sce3373 8 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 162451678 Nonpathogen - hypothetical protein sce3406 1 None None None 162456787 Nonpathogen - hypothetical protein sce8504 1 None None None 162454317 Common - ArsC family protein sce6040 73 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 162456619 Common sppA2 Protease IV sce8336 181 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162452750 Nonpathogen - hypothetical protein sce4474 1 None None None 162456721 Nonpathogen - hypothetical protein sce8438 3 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 162449471 Common - 3-oxoacyl-[acyl-carrier-protein] synthase sce1201 5 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162450664 Common treZ Malto-oligosyltrehalose trehalohydrolase sce2392 149 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 162454420 Common - transposase fragment sce6140 12 None None None 162448816 Common - hypothetical protein sce0546 73 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 162451556 Nonpathogen - hypothetical protein sce3284 1 None None None 162451565 Common - 4-hydroxybutyrate coenzyme A transferase sce3293 101 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 162449332 Common - Possible shikimate kinase sce1062 172 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 162451608 Common - putative Isoquinoline 1-oxidoreductase sce3336 100 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 162450415 Common - hypothetical protein sce2143 21 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 162453072 Common hycG NAD-dependent dehydrogenase subunit sce4796 192 COG3260 COG3260, Ni,Fe-hydrogenase III small subunit Energy production and conversion 162451100 Nonpathogen - hypothetical protein sce2828 1 None None None 162456601 Common - hypothetical protein sce8318 14 None None None 162451667 Common - putative transposase sce3395 27 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 162454599 Common - integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase) sce6319 92 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 162451275 Common mutH methyl-directed mismatch repair sce3003 28 COG3066 MutH, DNA mismatch repair protein DNA replication, recombination, and repair 162448761 Common mgtE1 Mg2+ transporter sce0491 183 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 162455371 Common xynA2 hypothetical protein sce7089 29 COG3693 XynA, Beta-1,4-xylanase Carbohydrate transport and metabolism 162453794 Common - hypothetical protein sce5518 31 None None None 162457325 Common - hypothetical protein sce9040 91 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 162452305 Common - Protein kinase sce4031 142 COG3899 COG3899, Predicted ATPase General function prediction only 162456098 Common - hypothetical protein sce7816 4 None None None 162453370 Nonpathogen - hypothetical protein sce5094 1 None None None 162454878 Common - hypothetical protein sce6596 16 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 162455658 Common cysA sulfate-transporting ATPase sce7376 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 162451204 Nonpathogen - hypothetical protein sce2932 10 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162453482 Nonpathogen - hypothetical protein sce5206 1 None None None 162453167 Common - Protein kinase sce4891 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448653 Common - putative antitoxin of toxin-antitoxin stability system sce0383 25 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 162452398 Common - hypothetical protein sce4122 27 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 162450357 Common - hypothetical protein sce2085 45 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 162449176 Common - methylated-DNA--protein-cysteine methyltransferase sce0906 201 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 162450560 Common ribA1 GTP cyclohydrolase II sce2288 227 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 162455073 Common - hypothetical protein sce6791 12 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 162449043 Common - hypothetical protein sce0773 10 None None None 162449062 Common - hypothetical protein sce0792 18 None None None 162454881 Nonpathogen - hypothetical protein sce6599 2 None None None 162451071 Nonpathogen - hypothetical protein sce2799 1 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 162453039 Common - hypothetical protein sce4763 39 COG1297 COG1297, Predicted membrane protein Function unknown 162454693 Common - hypothetical protein sce6413 163 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 162449705 Nonpathogen - hypothetical protein sce1434 1 None None None 162456435 Common ald hypothetical protein sce8152 167 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 162448706 Common - AMP-dependent synthetase and ligase sce0436 212 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 162451739 Nonpathogen - hypothetical protein sce3466 1 None None None 162455674 Nonpathogen - hypothetical protein sce7392 1 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 162456766 Nonpathogen - hypothetical protein sce8483 1 None None None 162451802 Common - Putative beta-lactamase hcpE precursor sce3529 81 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 162455538 Common - putative protein phosphatase sce7256 74 COG0622 COG0622, Predicted phosphoesterase General function prediction only 162453334 Common - 4'-phosphopantetheinyl transferase sce5058 63 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 162450767 Common - probable hemolysin sce2495 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 162450867 Common - autotransporter sce2595 12 None None None 162454273 Common - hypothetical protein sce5996 44 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 162449574 Common - Glycogen operon protein sce1303 153 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 162453309 Nonpathogen tif2 Translation initiation factor IF-2, chloroplast precursor sce5032 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 162456139 Nonpathogen - hypothetical protein sce7856 1 None None None 162456179 Nonpathogen - hypothetical protein sce7896 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162452987 Common - tonB family protein sce4711 8 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 162455998 Nonpathogen - putative secreted protein sce7716 1 None None None 162449289 Nonpathogen - hypothetical protein sce1018 1 None None None 162453323 Nonpathogen - hypothetical protein sce5047 1 COG1950 COG1950, Predicted membrane protein Function unknown 162452219 Nonpathogen - hypothetical protein sce3946 1 None None None 162450138 Common - putative outer membrane protein sce1867 100 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 162450971 Nonpathogen - hypothetical protein sce2699 2 None None None 162453620 Nonpathogen - no similarity sce5344 13 COG4295 COG4295, Uncharacterized protein conserved in bacteria Function unknown 162451349 Nonpathogen - hypothetical protein sce3077 6 None None None 162451360 Common - hypothetical protein sce3088 16 COG5628 COG5628, Predicted acetyltransferase General function prediction only 162449641 Common - dihydrofolate reductase family protein sce1370 62 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 162450006 Common kup potassium uptake protein sce1735 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 162455470 Nonpathogen - hypothetical protein sce7187 1 None None None 162453689 Nonpathogen - hypothetical protein sce5413 1 None None None 162455384 Common - hypothetical protein sce7102 133 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 162448405 Nonpathogen - hypothetical protein sce0135 1 None None None 162456256 Common - hypothetical protein sce7973 57 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 162448387 Nonpathogen - hypothetical protein sce0117 3 None None None 162452156 Common mxcC 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sce3883 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162452257 Common - Hsp70 heat shock protein sce3984 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 162453101 Nonpathogen - Probable outer membrane protein sce4825 1 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 162456974 Nonpathogen - putative secreted protein sce8690 2 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162451782 Common - general stress protein sce3509 39 COG3871 COG3871, Uncharacterized stress protein (general stress protein 26) General function prediction only 162452850 Common - putative hydrogenase sce4574 44 COG1941 FrhG, Coenzyme F420-reducing hydrogenase, gamma subunit Energy production and conversion 162452603 Common - conserved hypothetical secreted protein sce4327 59 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 162455477 Common - Protein kinase sce7195 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162452292 Nonpathogen - hypothetical protein sce4018 1 None None None 162456392 Nonpathogen - hypothetical protein sce8109 1 None None None 162451198 Nonpathogen - hypothetical protein sce2926 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 162457395 Nonpathogen - hypothetical protein sce9110 1 None None None 162450365 Nonpathogen - hypothetical protein sce2093 8 None None None 162454398 Nonpathogen - hypothetical protein sce6119 1 None None None 162449252 Nonpathogen - hypothetical protein sce0982 1 None None None 162450891 Common - hypothetical protein sce2619 35 COG3535 COG3535, Uncharacterized conserved protein Function unknown 162453892 Common - Lactoylglutathione lyase sce5616 27 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 162454345 Common - Protein kinase sce6068 157 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455318 Nonpathogen - hypothetical protein sce7036 1 None None None 162448355 Common leuD Isopropylmalate isomerase small subunit sce0085 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 162450488 Common - hypothetical protein sce2216 7 COG4907 COG4907, Predicted membrane protein Function unknown 162456324 Common pilI hypothetical protein sce8041 19 None None None 162456198 Nonpathogen - putative secreted protein sce7915 1 None None None 162452433 Nonpathogen - hypothetical protein sce4157 1 None None None 162453315 Common thuG Trehalose/maltose transport system, permease protein sce5039 173 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 162457032 Nonpathogen - hypothetical protein sce8747 1 None None None 162450385 Nonpathogen - hypothetical protein sce2113 1 None None None 162454236 Common recA2 RecA protein sce5959 218 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 162450776 Nonpathogen - hypothetical protein sce2504 1 None None None 162455310 Common - Probable Lipase sce7028 6 None None None 162455237 Common - ABC-type uncharacterized transport system,permease component sce6955 24 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 162452425 Common - oxidoreductase sce4149 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 162455355 Common - hypothetical protein sce7073 72 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455983 Common - Protein kinase sce7701 166 COG3899 COG3899, Predicted ATPase General function prediction only 162448484 Common cobO Cob(I)yrinic acid a,c-diamide adenosyltransferase sce0214 141 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 162454294 Nonpathogen - hypothetical protein sce6017 4 None None None 162450374 Nonpathogen - hypothetical protein sce2102 1 None None None 162454455 Common - antioxidant protein sce6175 220 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 162450048 Common - phosphoserine phosphatase sce1777 142 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 162451614 Common - hypothetical protein sce3342 6 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 162451641 Common helZ SWF/SNF family helicase sce3369 127 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 162450959 Nonpathogen - hypothetical protein sce2687 1 None None None 162457279 Nonpathogen - hypothetical protein sce8994 8 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 162451937 Nonpathogen - hypothetical protein sce3664 1 None None None 162455554 Nonpathogen - hypothetical protein sce7272 1 None None None 162453412 Nonpathogen - hypothetical protein sce5136 1 None None None 162449335 Nonpathogen - hypothetical protein sce1065 1 None None None 162449199 Nonpathogen - hypothetical protein sce0928 1 None None None 162451286 Nonpathogen menC Putative O-succinylbenzoate synthase sce3014 9 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 162456728 Nonpathogen - hypothetical protein sce8445 1 None None None 162450999 Common - two-component system sensor protein sce2727 217 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 162451986 Common folD1 Methenyltetrahydrofolate cyclohydrolase sce3713 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 162453862 Common - hypothetical protein sce5586 57 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162455168 Common - Histidine triad, HIT-like protein sce6886 137 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 162455680 Nonpathogen - hypothetical protein sce7398 1 None None None 162456483 Nonpathogen - conserved hypothetical protein with PAAR motif sce8200 6 None None None 162456129 Nonpathogen - transcriptional regulator, TetR family sce7846 3 COG1309 AcrR, Transcriptional regulator Transcription 162457108 Common - hypothetical protein sce8823 7 None None None 162448632 Nonpathogen - hypothetical protein sce0362 1 None None None 162449673 Common - Sugar-binding protein sce1402 14 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 162449615 Nonpathogen - hypothetical protein sce1344 1 None None None 162454428 Nonpathogen - hypothetical protein sce6148 3 None None None 162451918 Nonpathogen - hypothetical protein sce3645 3 None None None 162454961 Common - hypothetical protein sce6679 49 COG1434 COG1434, Uncharacterized conserved protein Function unknown 162451294 Common - hypothetical protein sce3022 12 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 162451269 Nonpathogen - hypothetical protein sce2997 1 None None None 162455700 Common - possible peptidase sce7418 8 None None None 162456353 Nonpathogen - hypothetical protein sce8070 1 None None None 162455085 Common - probable serine protease sce6803 16 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 162456375 Nonpathogen - hypothetical protein sce8092 1 None None None 162456455 Nonpathogen - cytochrome C-type biogenesis protein sce8172 2 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 162450501 Common sspA glutamyl endopeptidase sce2229 24 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 162454718 Common - hypothetical protein sce6436 4 None None None 162457303 Nonpathogen - hypothetical protein sce9018 1 None None None 162450726 Common - heme exporter protein B sce2454 52 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 162457183 Common - Predicted phosphoglycolate phosphatase sce8898 158 COG0546 Gph, Predicted phosphatases General function prediction only 162450864 Nonpathogen - Piccolo protein sce2592 10 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 162450882 Common - putative oxidoreductase sce2610 197 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 162455375 Common - Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) sce7093 134 None None None 162452374 Nonpathogen - probable serine protease precursor sce4098 5 None None None 162457025 Nonpathogen - hypothetical protein sce8740 1 None None None 162450029 Common rpiA Ribose-5-phosphate isomerase sce1758 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 162449207 Common - hypothetical protein sce0937 7 None None None 162453781 Common - acid phosphatase 5, tartrate resistant sce5505 16 COG1409 Icc, Predicted phosphohydrolases General function prediction only 162452381 Nonpathogen - hypothetical protein sce4105 1 None None None 162451183 Nonpathogen - hypothetical protein sce2911 3 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 162449382 Common lolD ABC transporter, ATP-binding protein sce1112 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162456113 Nonpathogen - hypothetical protein sce7830 2 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 162449161 Common pcrA ATP-depentend DNA helicase sce0891 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 162449292 Common - hypothetical protein sce1022 7 None None None 162451708 Nonpathogen - hypothetical protein sce3436 1 None None None 162449832 Common - hypothetical protein sce1561 85 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 162448757 Common - Protein kinase sce0487 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162450100 Common nirJ heme biosynthesis protein sce1829 146 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 162452280 Common - Bacterial type 3a, cellulose-binding domain sce4006 7 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 162453300 Common yliB hypothetical protein sce5024 74 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 162452541 Nonpathogen - hypothetical protein sce4265 1 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 162454298 Nonpathogen - hypothetical protein sce6021 1 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 162450809 Common - hypothetical protein sce2537 10 None None None 162455397 Nonpathogen - hypothetical protein sce7115 1 None None None 162457421 Common - Protein kinase sce9135 144 COG3899 COG3899, Predicted ATPase General function prediction only 162453552 Common glmU UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase sce5276 223 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 162449713 Common - putative nucleotide-binding protein sce1442 60 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 162456033 Nonpathogen - putative secreted protein sce7751 1 None None None 162455174 Common - hypothetical protein sce6892 88 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 162448741 Nonpathogen - hypothetical protein sce0471 5 None None None 162449279 Common - permease of the major facilitator superfamily sce1009 125 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 162454263 Nonpathogen - hypothetical protein sce5986 1 None None None 162449432 Nonpathogen - hypothetical protein sce1162 1 None None None 162455205 Common - hypothetical protein sce6923 49 COG0433 COG0433, Predicted ATPase General function prediction only 162455525 Common dacB probable D-alanyl-D-alanine carboxypeptidase sce7243 104 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 162452166 Common - hypothetical protein sce3893 8 None None None 162452388 Nonpathogen - hypothetical protein sce4112 3 None None None 162456629 Common ycaC putative cysteine hydrolase sce8346 77 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 162456610 Nonpathogen - hypothetical protein sce8327 1 None None None 162448529 Common dnaX DNA polymerase III subunit Tau sce0259 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 162449839 Common - hypothetical protein sce1568 21 None None None 162457052 Nonpathogen - no similarity sce8767 1 None None None 162450714 Nonpathogen - hypothetical protein sce2442 3 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 162455060 Common rmlB2 dTDP-glucose 4,6-dehydratase sce6778 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162450760 Common - hypothetical protein sce2488 40 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 162452548 Common pilR2 Nitrogen regulation protein NR(I). sce4272 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 162454998 Common - putative ABC transport system permease protein sce6716 32 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 162450111 Common - hypothetical protein sce1839 23 None None None 162456716 Common - two-component response regulator sce8433 218 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 162454561 Common - transposase sce6281 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162455718 Nonpathogen - hypothetical protein sce7436 1 None None None 162453708 Common - putative two-component system sensor kinase sce5432 98 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 162453535 Common - hypothetical protein sce5259 26 COG1262 COG1262, Uncharacterized conserved protein Function unknown 162454966 Common - glycosyltransferase sce6684 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 162450426 Common - NAD-dependent epimerase/dehydratase sce2154 78 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 162455389 Common - sensor histidine kinase sce7107 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162455710 Common - Protein kinase sce7428 148 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 162448755 Nonpathogen - hypothetical protein sce0485 2 None None None 162451971 Common - putative ABC-type organic solvent resistance transport system substrate-binding protein sce3698 68 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 162454336 Common arsR4 transcriptional regulator, ArsR family sce6059 50 COG0640 ArsR, Predicted transcriptional regulators Transcription 162455803 Nonpathogen - hypothetical protein sce7521 2 None None None 162456240 Common rpsC 30S ribosomal protein S3 sce7957 248 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 162448338 Common sdr cell surface SD repeat protein precursor sce0069 42 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 162450018 Nonpathogen - hypothetical protein sce1747 1 None None None 162454991 Nonpathogen - ECF-family RNA polymerase sigma factor sce6709 3 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 162455629 Nonpathogen secG protein-export membrane protein sce7347 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 162452802 Nonpathogen - hypothetical protein sce4526 1 None None None 162448639 Common trmH tRNA (guanosine-2'-O-)-methyltransferase sce0369 184 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 162449993 Nonpathogen - probable geranylgeranyl pyrophosphate synthase sce1722 1 None None None 162454829 Common ureD urease accessory protein UreD sce6547 70 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 162453369 Nonpathogen - hypothetical protein sce5093 1 None None None 162448750 Nonpathogen - hypothetical protein sce0480 1 None None None 162449236 Common - hypothetical protein sce0966 8 COG5520 COG5520, O-Glycosyl hydrolase Cell envelope biogenesis, outer membrane 162450392 Common - Pyruvate oxidase sce2120 220 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 162450074 Common frpC putative hemolysin-type calcium binding protein sce1803 32 None None None 162448666 Nonpathogen - hypothetical protein sce0396 1 None None None 162455684 Common - hypothetical protein sce7402 55 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 162450951 Common - two-component hybrid sensor and regulator sce2679 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 162456342 Common - putative methylase sce8059 207 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 162452267 Common - hypothetical protein sce3994 24 None None None