Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome NC_009674 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 152974609 Common - hypothetical protein Bcer98_0793 3 None None None 152973892 Common - small, acid-soluble spore protein Bcer98_0039 10 None None None 152977355 Common - Triose-phosphate isomerase Bcer98_3680 217 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 152973875 Common - sigmaK-factor processing regulatory BofA Bcer98_0022 9 None None None 152975011 Common - metallophosphoesterase Bcer98_1211 88 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 152976946 Common - phenylalanyl-tRNA synthetase, alpha subunit Bcer98_3249 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 152977139 Common - sulfatase Bcer98_3451 39 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 152975240 Common - peptide methionine sulfoxide reductase Bcer98_1443 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 152974061 Common - ABC-2 type transporter Bcer98_0217 101 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 152976961 Common - Primosomal DnaI domain protein Bcer98_3264 63 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 152976338 Pathogen - hypothetical protein Bcer98_2626 1 None None None 152974110 Common - adenylosuccinate lyase Bcer98_0269 240 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 152977281 Common - protein of unknown function DUF77 Bcer98_3604 47 COG0011 COG0011, Uncharacterized conserved protein Function unknown 152974596 Pathogen - hypothetical protein Bcer98_0779 1 None None None 152977563 Common - periplasmic binding protein Bcer98_3901 73 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 152974937 Common - Phosphoribosyl-AMP cyclohydrolase Bcer98_1134 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 152973890 Common - peptidase U57 YabG Bcer98_0037 11 None None None 152977073 Common - Transposase and inactivated derivatives-like protein Bcer98_3383 22 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975391 Common - protein tyrosine phosphatase Bcer98_1604 127 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 152975623 Pathogen - hypothetical protein Bcer98_1854 1 None None None 152976933 Common - PUA domain containing protein Bcer98_3236 135 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 152976104 Common - phage integrase domain protein SAM domain protein Bcer98_2388 15 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152977492 Common - ATP synthase F1, beta subunit Bcer98_3825 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 152973999 Common - arginase Bcer98_0147 161 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 152977452 Common - hypothetical protein Bcer98_3784 1 None None None 152974894 Common - D-alanyl carrier protein Bcer98_1090 12 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152975098 Common - hypothetical protein Bcer98_1298 3 None None None 152976626 Common - hypothetical protein Bcer98_2917 3 None None None 152974119 Common - phosphoribosylamine--glycine ligase Bcer98_0278 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 152977179 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase Bcer98_3495 118 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 152977484 Common - NADH dehydrogenase I, D subunit Bcer98_3816 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 152974954 Common - sodium:neurotransmitter symporter Bcer98_1151 89 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 152974280 Pathogen - small, acid-soluble spore protein, gamma-type Bcer98_0447 1 None None None 152974507 Common - amino acid permease-associated region Bcer98_0683 183 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 152976911 Common - MotA/TolQ/ExbB proton channel Bcer98_3212 119 COG1291 MotA, Flagellar motor component Cell motility and secretion 152975476 Common - Resolvase domain Bcer98_1691 60 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152977634 Pathogen - DNA recombinase, putative Bcer98_3975 1 None None None 152975104 Common - protein of unknown function DUF405 Bcer98_1304 32 COG2311 COG2311, Predicted membrane protein Function unknown 152976811 Common - aminotransferase class V Bcer98_3109 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 152976727 Common - protein of unknown function DUF299 Bcer98_3022 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 152974573 Common - hypothetical protein Bcer98_0753 2 None None None 152976423 Common - Alanine racemase Bcer98_2711 131 COG1609 PurR, Transcriptional regulators Transcription 152974659 Pathogen - hypothetical protein Bcer98_0846 1 None None None 152976675 Common - hypothetical protein Bcer98_2967 9 None None None 152975472 Common - sigma54 specific transcriptional regulator, Fis family Bcer98_1687 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 152974543 Common - hypothetical protein Bcer98_0720 3 None None None 152976375 Common - protein of unknown function UPF0223 Bcer98_2663 11 COG4476 COG4476, Uncharacterized protein conserved in bacteria Function unknown 152974486 Common - protein of unknown function DUF1232 Bcer98_0661 3 COG3339 COG3339, Uncharacterized conserved protein Function unknown 152977044 Common - cell divisionFtsK/SpoIIIE Bcer98_3351 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 152975588 Common - regulatory protein ArsR Bcer98_1811 35 COG0640 ArsR, Predicted transcriptional regulators Transcription 152974661 Common - peptidase M48 Ste24p Bcer98_0848 62 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 152977617 Common - protein of unknown function UPF0118 Bcer98_3955 18 COG0628 PerM, Predicted permease General function prediction only 152975982 Common - thioesterase superfamily protein Bcer98_2255 107 COG0824 FcbC, Predicted thioesterase General function prediction only 152975438 Common - heat shock protein Hsp20 Bcer98_1651 45 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 152976003 Common - hypothetical protein Bcer98_2276 2 None None None 152974675 Common - spore germination protein GerPE Bcer98_0862 2 None None None 152974805 Pathogen - hypothetical protein Bcer98_1001 1 None None None 152975670 Common - short-chain dehydrogenase/reductase SDR Bcer98_1905 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 152974901 Common - conserved repeat domain Bcer98_1097 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152975429 Common - NAD(P)H dehydrogenase (quinone) Bcer98_1642 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 152977027 Pathogen - hypothetical protein Bcer98_3332 1 None None None 152975491 Common - metallophosphoesterase Bcer98_1710 100 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 152975792 Common - protein of unknown function DUF6 transmembrane Bcer98_2043 202 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 152976867 Common - rod shape-determining protein MreC Bcer98_3166 149 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 152974444 Common - thiazole biosynthesis family protein Bcer98_0619 170 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 152976794 Common - transcription elongation factor GreA Bcer98_3092 204 COG0782 GreA, Transcription elongation factor Transcription 152974097 Common - GMP synthase, large subunit Bcer98_0253 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 152973916 Common - cysteine synthase A Bcer98_0063 223 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 152974646 Common - transcriptional regulator, TetR family Bcer98_0833 134 COG1309 AcrR, Transcriptional regulator Transcription 152975451 Common - 6-phosphogluconate dehydrogenase, decarboxylating Bcer98_1665 180 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 152975547 Common - hypothetical protein Bcer98_1769 9 None None None 152974192 Common - Endonuclease/exonuclease/phosphatase Bcer98_0356 6 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 152974446 Common - phosphomethylpyrimidine kinase Bcer98_0621 222 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 152975727 Common - Syd protein Bcer98_1969 6 None None None 152974681 Common - 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Bcer98_0868 180 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 152974668 Common - putative cold-shock DNA-binding domain protein Bcer98_0855 182 COG1278 CspC, Cold shock proteins Transcription 152975227 Common - aspartate kinase Bcer98_1430 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 152974855 Common - phosphonoacetaldehyde hydrolase Bcer98_1051 47 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 152977657 Common - Resolvase domain Bcer98_3998 141 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152976907 Common - transcriptional regulator, BadM/Rrf2 family Bcer98_3208 65 COG1959 COG1959, Predicted transcriptional regulator Transcription 152977203 Common - Kinase associated protein B Bcer98_3520 3 None None None 152976096 Pathogen - hypothetical protein Bcer98_2378 1 None None None 152975087 Common - hypothetical protein Bcer98_1287 4 None None None 152976939 Common - Colicin V production protein Bcer98_3242 10 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 152977446 Common - hypothetical protein Bcer98_3778 13 COG5652 COG5652, Predicted integral membrane protein Function unknown 152975277 Common - protein of unknown function UPF0118 Bcer98_1483 14 COG0628 PerM, Predicted permease General function prediction only 152973930 Common - DNA repair protein RadA Bcer98_0077 220 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 152975911 Common - recombinase of Bh.Int-like element Bcer98_2182 82 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 152975979 Common - anaerobic ribonucleoside-triphosphate reductase Bcer98_2252 96 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 152975024 Common - hypothetical protein Bcer98_1224 2 None None None 152975443 Common - transposase IS4 family protein Bcer98_1656 37 None None None 152977188 Common - L-lactate dehydrogenase Bcer98_3505 169 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 152974382 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit Bcer98_0555 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 152976681 Common - hypothetical protein Bcer98_2974 3 None None None 152975388 Pathogen - hypothetical protein Bcer98_1600 1 None None None 152976669 Common - protein of unknown function DUF1071 Bcer98_2961 5 None None None 152975941 Common - peptidase M4 thermolysin Bcer98_2213 46 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 152977064 Common - HI0933 family protein Bcer98_3371 156 COG2081 COG2081, Predicted flavoproteins General function prediction only 152976860 Common - ribosomal protein L21 Bcer98_3159 201 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 152977177 Common - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase Bcer98_3493 99 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 152974512 Common - polar amino acid ABC transporter, inner membrane subunit Bcer98_0688 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 152975017 Common - HI0933 family protein Bcer98_1217 146 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 152974045 Common - molybdenum ABC transporter, periplasmic molybdate-binding protein Bcer98_0200 162 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 152977601 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcer98_3939 43 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 152977192 Common - Glucose-6-phosphate isomerase Bcer98_3509 203 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 152976507 Common - 2,5-didehydrogluconate reductase Bcer98_2796 194 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 152975507 Common - acyl-CoA dehydrogenase domain protein Bcer98_1727 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 152977407 Common - cell envelope-related transcriptional attenuator Bcer98_3735 61 COG1316 LytR, Transcriptional regulator Transcription 152975550 Common - alpha/beta hydrolase fold Bcer98_1773 111 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152975034 Common - GTP cyclohydrolase I Bcer98_1234 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 152977595 Common - major facilitator superfamily MFS_1 Bcer98_3933 221 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152974992 Common - Superoxide dismutase Bcer98_1192 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 152975948 Common - peptidase S8 and S53 subtilisin kexin sedolisin Bcer98_2220 142 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 152977462 Common - two component transcriptional regulator, winged helix family Bcer98_3794 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976162 Common - peptidase S14 ClpP Bcer98_2448 13 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 152977013 Common - small acid-soluble spore protein alpha/beta type Bcer98_3318 13 None None None 152977663 Common - YycH family protein Bcer98_4004 7 COG4863 COG4863, Uncharacterized protein conserved in bacteria Function unknown 152976395 Common - Tetrahydrodipicolinate succinyltransferase domain protein Bcer98_2683 194 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 152977403 Common - NLP/P60 protein Bcer98_3731 128 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 152975110 Pathogen - hypothetical protein Bcer98_1311 1 None None None 152975930 Common - major facilitator superfamily MFS_1 Bcer98_2202 17 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152976211 Common - signal recognition particle protein Bcer98_2497 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 152974551 Common - amino acid carrier protein Bcer98_0728 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 152974199 Common - Hydroxyethylthiazole kinase Bcer98_0363 82 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 152976665 Pathogen - hypothetical protein Bcer98_2956 1 None None None 152974185 Common - ornithine carbamoyltransferase Bcer98_0349 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 152977547 Common - putative agmatinase Bcer98_3883 157 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 152976208 Common - 16S rRNA processing protein RimM Bcer98_2494 191 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 152977235 Common - uncharacterised conserved protein UCP010603 Bcer98_3553 5 COG4837 COG4837, Uncharacterized protein conserved in bacteria Function unknown 152976020 Common - Integrase catalytic region Bcer98_2294 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 152977262 Common - hypothetical protein Bcer98_3583 2 None None None 152976750 Common - GTP-binding protein LepA Bcer98_3046 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 152976155 Common - inner-membrane translocator Bcer98_2441 108 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 152976433 Common - lipoprotein, putative Bcer98_2721 1 None None None 152974387 Common - ribokinase Bcer98_0560 205 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 152974817 Common - hypothetical protein Bcer98_1013 2 None None None 152977181 Common - putative cold-shock DNA-binding domain protein Bcer98_3497 182 COG1278 CspC, Cold shock proteins Transcription 152976382 Pathogen - hypothetical protein Bcer98_2670 1 None None None 152975010 Common - Peptidoglycan-binding LysM Bcer98_1210 2 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 152974452 Common - Osmosensitive K channel His kinase sensor Bcer98_0627 92 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 152976717 Common - apurinic endonuclease Apn1 Bcer98_3012 97 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 152976015 Pathogen - hypothetical protein Bcer98_2288 1 None None None 152974108 Common - phosphoribosylaminoimidazole carboxylase, catalytic subunit Bcer98_0267 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 152974364 Common - ATPase associated with various cellular activities AAA_5 Bcer98_0536 132 COG0714 COG0714, MoxR-like ATPases General function prediction only 152975251 Common - Extradiol ring-cleavage dioxygenase class III protein subunit B Bcer98_1456 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 152976818 Common - Transcription factor RsfA Bcer98_3116 3 None None None 152977528 Common - acyl-CoA dehydrogenase domain protein Bcer98_3863 170 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 152977627 Common - major facilitator superfamily MFS_1 Bcer98_3967 47 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 152976149 Common - amino acid-binding ACT domain protein Bcer98_2435 5 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 152974602 Common - LPXTG-motif cell wall anchor domain Bcer98_0786 133 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152976176 Common - tRNA pseudouridine synthase B Bcer98_2462 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 152977678 Common - parB-like partition protein Bcer98_4019 187 COG1475 Spo0J, Predicted transcriptional regulators Transcription 152975422 Common - ABC-2 type transport system permease protein Bcer98_1635 4 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 152975688 Common - transposase Bcer98_1925 5 None None None 152974706 Common - hypothetical protein Bcer98_0893 3 None None None 152975918 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_2189 102 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 152975519 Pathogen - hypothetical protein Bcer98_1739 1 None None None 152977641 Pathogen - hypothetical protein Bcer98_3982 2 None None None 152975291 Common - homoserine kinase Bcer98_1498 122 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 152975596 Common - phosphopantetheine-binding Bcer98_1824 20 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152976142 Common - Stage V sporulation protein S Bcer98_2428 24 COG2359 SpoVS, Uncharacterized protein conserved in bacteria Function unknown 152976035 Common - urocanate hydratase Bcer98_2311 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 152976367 Common - hypothetical protein Bcer98_2655 5 COG4896 COG4896, Uncharacterized protein conserved in bacteria Function unknown 152976847 Common - aminotransferase class V Bcer98_3146 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 152975938 Pathogen - hypothetical protein Bcer98_2210 1 None None None 152975651 Common - cytochrome P450 Bcer98_1885 89 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 152974497 Common - hypothetical protein Bcer98_0672 8 None None None 152975076 Common - Domain of unknown function DUF1798 Bcer98_1276 3 None None None 152975620 Common - Patatin Bcer98_1851 89 COG4667 COG4667, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 152975386 Pathogen - hypothetical protein Bcer98_1598 1 None None None 152975701 Common - Septum formation initiator Bcer98_1939 1 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 152975339 Common - protein of unknown function DUF21 Bcer98_1548 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 152976296 Common - phage minor structural protein Bcer98_2584 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152974207 Common - NMT1/THI5 like domain protein Bcer98_0371 103 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 152977343 Common - Alpha/beta hydrolase fold-3 domain protein Bcer98_3668 129 COG0657 Aes, Esterase/lipase Lipid metabolism 152974090 Common - putative metalloendopeptidase, glycoprotease family Bcer98_0246 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 152976611 Pathogen - hypothetical protein Bcer98_2901 1 None None None 152977368 Pathogen - hypothetical protein Bcer98_3693 1 None None None 152976989 Common - hypothetical protein Bcer98_3292 3 None None None 152974686 Common - Ferrochelatase Bcer98_0873 169 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 152976287 Pathogen - hypothetical protein Bcer98_2575 1 None None None 152973923 Common - transcriptional regulator, XRE family Bcer98_0070 3 COG1476 COG1476, Predicted transcriptional regulators Transcription 152974305 Common - putative serine protein kinase, PrkA Bcer98_0472 71 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 152974833 Common - transposase mutator type Bcer98_1029 74 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974749 Common - dTDP-glucose 4,6-dehydratase Bcer98_0939 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 152976699 Common - ribosomal protein L33 Bcer98_2994 80 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 152975964 Common - hypothetical protein Bcer98_2237 8 None None None 152976529 Common - adenosylmethionine-8-amino-7-oxononanoate aminotransferase Bcer98_2818 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 152975832 Pathogen - hypothetical protein Bcer98_2090 1 None None None 152976312 Common - hypothetical protein Bcer98_2600 2 None None None 152974340 Common - alanine dehydrogenase Bcer98_0509 168 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 152975345 Common - Stage II sporulation P family protein Bcer98_1555 15 None None None 152977054 Common - beta-lactamase domain protein Bcer98_3361 81 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 152975679 Common - protein of unknown function DUF952 Bcer98_1916 39 COG3502 COG3502, Uncharacterized protein conserved in bacteria Function unknown 152976084 Common - Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein Bcer98_2361 9 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 152976542 Common - short-chain dehydrogenase/reductase SDR Bcer98_2831 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 152977325 Common - CrcB protein Bcer98_3650 184 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 152974988 Common - hypothetical protein Bcer98_1188 2 None None None 152975055 Common - MazG nucleotide pyrophosphohydrolase Bcer98_1255 25 COG1694 MazG, Predicted pyrophosphatase General function prediction only 152974850 Pathogen - hypothetical protein Bcer98_1046 1 None None None 152973864 Common - pyridoxine biosynthesis protein Bcer98_0010 87 COG0214 SNZ1, Pyridoxine biosynthesis enzyme Coenzyme metabolism 152974296 Pathogen - hypothetical protein Bcer98_0463 1 None None None 152975153 Common - flagellar protein FliS Bcer98_1354 5 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 152974823 Common - transcriptional regulator, CdaR Bcer98_1019 58 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 152974001 Common - YbbR family protein Bcer98_0149 28 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 152975664 Common - hypothetical protein Bcer98_1898 2 None None None 152974430 Common - phosphate ABC transporter, inner membrane subunit PstC Bcer98_0604 233 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 152975987 Common - DNA polymerase III, epsilon subunit Bcer98_2260 198 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 152976280 Common - S-adenosyl-methyltransferase MraW Bcer98_2568 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 152974888 Common - putative transcriptional regulator, AsnC family Bcer98_1084 154 COG1522 Lrp, Transcriptional regulators Transcription 152975235 Common - cysteine synthase A Bcer98_1438 225 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 152976347 Common - hypothetical protein Bcer98_2635 9 COG4471 COG4471, Uncharacterized protein conserved in bacteria Function unknown 152974050 Common - cobalamin (vitamin B12) biosynthesis CbiX protein Bcer98_0205 84 COG2138 COG2138, Uncharacterized conserved protein Function unknown 152977475 Common - Protein of unknown function DUF1779 Bcer98_3807 4 None None None 152977374 Common - NUDIX hydrolase Bcer98_3699 63 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152974627 Common - transcriptional regulator, MarR family Bcer98_0812 2 COG1846 MarR, Transcriptional regulators Transcription 152975115 Common - 5'-3' exonuclease Bcer98_1316 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 152975130 Common - aminotransferase class-III Bcer98_1331 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 152974718 Common - Negative regulator of genetic competence Bcer98_0906 13 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 152974926 Common - ketol-acid reductoisomerase Bcer98_1122 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 152976746 Common - heat-inducible transcription repressor HrcA Bcer98_3042 149 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 152974341 Common - amino acid permease-associated region Bcer98_0510 182 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 152977433 Common - hypothetical protein Bcer98_3764 20 COG2389 COG2389, Uncharacterized metal-binding protein General function prediction only 152976369 Common - hypothetical protein Bcer98_2657 3 None None None 152975282 Pathogen - hypothetical protein Bcer98_1488 1 None None None 152976407 Common - Polyphosphate kinase Bcer98_2695 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 152977091 Common - nitrate reductase molybdenum cofactor assembly chaperone Bcer98_3401 10 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 152976955 Common - dUTPase Bcer98_3258 9 COG4508 COG4508, Uncharacterized protein conserved in bacteria Function unknown 152974532 Common - group-specific protein Bcer98_0709 2 None None None 152975205 Common - hypothetical protein Bcer98_1406 2 None None None 152977340 Common - cytochrome P450 Bcer98_3665 88 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 152975362 Common - hypothetical protein Bcer98_1573 45 COG1511 COG1511, Predicted membrane protein Function unknown 152975696 Common - phosphoribulokinase/uridine kinase Bcer98_1933 17 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 152977204 Common - Exonuclease RNase T and DNA polymerase III Bcer98_3521 16 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 152977560 Common - peptidase M50 Bcer98_3898 82 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 152974733 Pathogen - hypothetical protein Bcer98_0921 1 None None None 152974304 Pathogen - hypothetical protein Bcer98_0471 1 None None None 152974398 Pathogen - hypothetical protein Bcer98_0571 2 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 152973976 Common - preprotein translocase, SecY subunit Bcer98_0124 237 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 152975314 Common - GCN5-related N-acetyltransferase Bcer98_1523 129 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152975075 Pathogen - hypothetical protein Bcer98_1275 1 None None None 152974077 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Bcer98_0233 213 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 152974051 Common - uroporphyrin-III C-methyltransferase Bcer98_0206 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 152975595 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III Bcer98_1823 220 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 152975869 Common - GCN5-related N-acetyltransferase Bcer98_2129 8 COG0456 RimI, Acetyltransferases General function prediction only 152976558 Common - ABC transporter-related protein Bcer98_2847 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 152975866 Common - protein tyrosine/serine phosphatase Bcer98_2126 49 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 152974401 Common - 3D domain protein Bcer98_0574 11 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 152975053 Common - Uracil-DNA glycosylase superfamily Bcer98_1253 144 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 152975237 Common - sodium:neurotransmitter symporter Bcer98_1440 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 152975546 Common - zinc/iron permease Bcer98_1768 36 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 152974742 Common - macrocin-O-methyltransferase Bcer98_0930 22 None None None 152974819 Pathogen - protein of unknown function DUF1648 Bcer98_1015 1 COG5658 COG5658, Predicted integral membrane protein Function unknown 152975344 Pathogen - hypothetical protein Bcer98_1554 1 None None None 152976289 Pathogen - hypothetical protein Bcer98_2577 1 None None None 152976303 Common - phage head-tail adaptor, putative Bcer98_2591 2 COG5614 COG5614, Bacteriophage head-tail adaptor General function prediction only 152977417 Common - polysaccharide deacetylase Bcer98_3747 94 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152974037 Common - lipoprotein, putative Bcer98_0191 1 None None None 152976434 Common - acetyl-CoA acetyltransferase Bcer98_2722 181 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 152976304 Common - uncharacterized phage protein Bcer98_2592 3 None None None 152975780 Pathogen - hypothetical protein Bcer98_2030 1 None None None 152975532 Common - short-chain dehydrogenase/reductase SDR Bcer98_1754 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152975700 Common - hypothetical protein Bcer98_1938 4 None None None 152976488 Common - hypothetical protein Bcer98_2777 2 None None None 152974157 Pathogen - 5-methylthioribose kinase Bcer98_0316 2 COG4857 COG4857, Predicted kinase General function prediction only 152974469 Common - nitroreductase Bcer98_0644 78 COG0778 NfnB, Nitroreductase Energy production and conversion 152977270 Common - L-lactate dehydrogenase Bcer98_3591 164 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 152975018 Common - Asparaginase/glutaminase Bcer98_1218 138 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 152977069 Pathogen - hypothetical protein Bcer98_3377 1 None None None 152974468 Common - GerA spore germination protein Bcer98_0643 15 None None None 152975697 Common - 4-phytase Bcer98_1935 183 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152976601 Common - translation elongation factor P Bcer98_2891 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 152976394 Common - amidohydrolase Bcer98_2682 167 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 152977631 Common - guanosine monophosphate reductase Bcer98_3971 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 152975125 Common - hypothetical protein Bcer98_1326 2 None None None 152974357 Common - L-lactate transport Bcer98_0527 102 COG1620 LldP, L-lactate permease Energy production and conversion 152976223 Common - protein of unknown function DUF322 Bcer98_2509 37 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 152974656 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0843 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152975610 Common - cell wall hydrolase SleB Bcer98_1840 105 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 152975855 Common - ABC transporter-related protein Bcer98_2114 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 152976443 Common - 5-methylthioribose kinase Bcer98_2732 28 COG4857 COG4857, Predicted kinase General function prediction only 152977158 Pathogen - hypothetical protein Bcer98_3470 1 COG3766 COG3766, Predicted membrane protein Function unknown 152977198 Common - alpha/beta hydrolase fold Bcer98_3515 173 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152975506 Common - methylisocitrate lyase Bcer98_1726 133 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 152974692 Common - hypothetical protein Bcer98_0879 2 None None None 152973942 Common - preprotein translocase, SecE subunit Bcer98_0089 2 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 152974804 Common - spore coat-associated protein Bcer98_1000 2 None None None 152977512 Common - hypothetical protein Bcer98_3847 1 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 152977574 Common - Spore coat protein GerQ Bcer98_3912 5 None None None 152976226 Common - Ribulose-phosphate 3-epimerase Bcer98_2512 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 152977127 Common - Phosphoenolpyruvate carboxykinase (ATP) Bcer98_3438 98 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 152975272 Common - NAD(P)H dehydrogenase (quinone) Bcer98_1478 94 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 152976136 Common - spore coat protein E Bcer98_2422 3 None None None 152976408 Common - Ppx/GppA phosphatase Bcer98_2696 184 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 152976693 Common - protein of unknown function DUF185 Bcer98_2988 89 COG1565 COG1565, Uncharacterized conserved protein Function unknown 152976639 Common - putative CheA signal transduction histidine kinase Bcer98_2930 3 None None None 152975121 Common - Aldose 1-epimerase Bcer98_1322 45 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 152974620 Common - hypothetical protein Bcer98_0804 3 None None None 152975735 Common - Inosine/uridine-preferring nucleoside hydrolase Bcer98_1982 83 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 152977421 Common - glycoside hydrolase family 4 Bcer98_3751 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 152976036 Common - histidine ammonia-lyase Bcer98_2312 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 152975262 Pathogen - haemolytic enterotoxin Bcer98_1467 2 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 152973939 Common - RNA methyltransferase, TrmH family, group 3 Bcer98_0086 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 152974249 Pathogen - hypothetical protein Bcer98_0415 1 None None None 152974521 Common - hypothetical protein Bcer98_0698 5 None None None 152976067 Common - Resolvase domain Bcer98_2343 24 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152976498 Common - IG hypothetical 17224 Bcer98_2787 3 None None None 152976116 Pathogen - hypothetical protein Bcer98_2400 1 None None None 152974769 Common - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Bcer98_0960 198 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 152977557 Pathogen - hypothetical protein Bcer98_3894 1 None None None 152974810 Common - aldehyde dehydrogenase Bcer98_1006 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152975602 Common - cytochrome P450 Bcer98_1831 87 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 152974579 Common - transposase IS4 family protein Bcer98_0761 7 None None None 152974953 Common - siroheme synthase Bcer98_1150 150 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 152974960 Common - phage shock protein A, PspA Bcer98_1157 45 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 152974983 Common - protein of unknown function DUF72 Bcer98_1183 76 COG1801 COG1801, Uncharacterized conserved protein Function unknown 152977130 Common - protein of unknown function DUF6 transmembrane Bcer98_3441 151 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 152974949 Common - Ferredoxin--nitrite reductase Bcer98_1146 171 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 152974873 Common - Phosphoglycerate mutase Bcer98_1069 10 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 152974628 Common - hypothetical protein Bcer98_0813 5 COG4980 GvpP, Gas vesicle protein General function prediction only 152974297 Common - Tetratricopeptide domain protein Bcer98_0464 4 COG5091 SGT1, Suppressor of G2 allele of skp1 and related proteins General function prediction only 152974783 Common - response regulator aspartate phosphatase Bcer98_0974 4 None None None 152975502 Common - penicillin-binding protein, 1A family Bcer98_1722 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 152974247 Common - Cna B domain protein Bcer98_0413 9 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 152977259 Common - NLPA lipoprotein Bcer98_3580 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 152974334 Common - two component transcriptional regulator, winged helix family Bcer98_0503 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152974752 Common - spore coat protein Z Bcer98_0942 2 None None None 152975068 Common - aminotransferase class I and II Bcer98_1268 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 152975396 Common - Alcohol dehydrogenase zinc-binding domain protein Bcer98_1609 176 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 152977014 Common - thiamine biosynthesis/tRNA modification protein ThiI Bcer98_3319 93 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 152976418 Common - putative competence-specific nuclease Bcer98_2706 2 None None None 152977241 Common - protein of unknown function DUF86 Bcer98_3559 6 COG2445 COG2445, Uncharacterized conserved protein Function unknown 152977383 Common - hypothetical protein Bcer98_3708 4 None None None 152975768 Common - D-serine ammonia-lyase Bcer98_2017 39 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 152976552 Common - peptidase T-like protein Bcer98_2841 141 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 152977640 Pathogen - helix-turn-helix domain protein Bcer98_3981 2 None None None 152975381 Common - Formate--tetrahydrofolate ligase Bcer98_1593 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 152975772 Common - CRISPR-associated protein Cas2 Bcer98_2021 35 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 152976930 Common - two component transcriptional regulator, winged helix family Bcer98_3233 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152974427 Common - small GTP-binding protein Bcer98_0601 188 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 152976126 Common - 6-phosphogluconolactonase Bcer98_2410 58 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 152975614 Common - LAAC Bcer98_1844 5 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 152973980 Common - ribosomal protein L36 Bcer98_0128 136 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 152977219 Common - YxaJ Bcer98_3537 1 None None None 152974977 Common - protein of unknown function DUF81 Bcer98_1177 16 COG0730 COG0730, Predicted permeases General function prediction only 152974726 Common - RelA/SpoT domain protein Bcer98_0914 44 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 152975763 Common - sulfatase Bcer98_2012 64 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 152974400 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0573 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152976784 Common - Alanine racemase Bcer98_3082 127 COG1609 PurR, Transcriptional regulators Transcription 152975533 Common - isochorismate synthase Bcer98_1755 222 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152975267 Common - DNA topoisomerase III Bcer98_1472 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 152977578 Common - Xanthine/uracil/vitamin C permease Bcer98_3916 40 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 152975687 Common - Inorganic diphosphatase Bcer98_1924 64 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 152975480 Common - hypothetical protein Bcer98_1696 2 None None None 152975246 Common - putative two component transcriptional regulator, winged helix family Bcer98_1450 106 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976274 Common - UDP-N-acetylmuramoylalanine--D-glutamate ligase Bcer98_2562 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 152976079 Common - protein of unknown function UPF0150 Bcer98_2356 46 COG1598 COG1598, Uncharacterized conserved protein Function unknown 152973908 Common - Septum formation initiator Bcer98_0055 3 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 152975147 Common - hypothetical protein Bcer98_1348 2 None None None 152974942 Common - sulfatase Bcer98_1139 69 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 152976543 Common - beta-lactamase domain protein Bcer98_2832 83 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 152976647 Common - hypothetical protein Bcer98_2938 2 None None None 152975213 Common - Na+/H+ antiporter NhaC Bcer98_1414 69 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 152977412 Pathogen - hypothetical protein Bcer98_3740 1 None None None 152974526 Common - DNA-3-methyladenine glycosylase Bcer98_0703 80 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 152976734 Common - metal dependent phosphohydrolase Bcer98_3030 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 152974321 Common - Flotillin domain protein Bcer98_0488 45 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 152976263 Common - Sporulation protein YlmC/YmxH Bcer98_2551 15 COG1873 COG1873, Uncharacterized conserved protein Function unknown 152976060 Common - transketolase Bcer98_2336 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 152974689 Common - protein of unknown function DUF520 Bcer98_0876 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 152976148 Common - hypothetical protein Bcer98_2434 69 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 152975463 Common - protein of unknown function DUF21 Bcer98_1678 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 152977248 Common - YbaK/prolyl-tRNA synthetase associated region Bcer98_3567 17 COG2606 EbsC, Uncharacterized conserved protein Function unknown 152977330 Common - spore germination protein Bcer98_3655 15 None None None 152975834 Common - conserved hypothetical cytosolic protein Bcer98_2093 3 None None None 152975877 Common - putative ATP synthase protein I Bcer98_2137 2 None None None 152976056 Common - ABC transporter-related protein Bcer98_2332 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152976538 Common - acetylglutamate kinase Bcer98_2827 216 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 152976541 Pathogen - hypothetical protein Bcer98_2830 1 None None None 152976632 Pathogen - hypothetical protein Bcer98_2923 1 None None None 152977237 Common - Spore coat protein YutH Bcer98_3555 4 None None None 152974916 Common - transcriptional regulator, MarR family Bcer98_1112 8 COG1846 MarR, Transcriptional regulators Transcription 152975803 Common - protein of unknown function DUF979 Bcer98_2057 28 COG3817 COG3817, Predicted membrane protein Function unknown 152975206 Common - asparagine synthase (glutamine-hydrolyzing) Bcer98_1407 177 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 152975999 Common - Threonyl/alanyl tRNA synthetase SAD Bcer98_2272 245 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976248 Common - carbamoyl-phosphate synthase, small subunit Bcer98_2536 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 152976593 Common - Sporulation stage III protein AE Bcer98_2883 15 None None None 152974581 Common - Rieske (2Fe-2S) domain protein Bcer98_0763 89 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 152976733 Common - protein of unknown function UPF0054 Bcer98_3029 166 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 152976472 Common - protein of unknown function DUF1002 Bcer98_2761 12 COG4086 COG4086, Predicted secreted protein Function unknown 152974139 Common - glutamyl-tRNA(Gln) amidotransferase, A subunit Bcer98_0298 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 152976500 Common - hypothetical protein Bcer98_2789 2 None None None 152977469 Common - peptidase M23B Bcer98_3801 32 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152975101 Common - Carboxypeptidase Taq Bcer98_1301 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 152975712 Common - GCN5-related N-acetyltransferase Bcer98_1952 3 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 152976257 Common - DivIVA family protein Bcer98_2545 47 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 152975177 Common - flagellar motor switch protein FliM Bcer98_1378 89 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 152974636 Common - Antibiotic biosynthesis monooxygenase Bcer98_0822 29 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 152975843 Common - major facilitator superfamily MFS_1 Bcer98_2102 106 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152974287 Common - ABC transporter-related protein Bcer98_0454 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 152976072 Common - hypothetical protein Bcer98_2348 5 None None None 152977001 Common - Argininosuccinate synthase Bcer98_3306 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 152974272 Common - hypothetical protein Bcer98_0439 1 None None None 152975005 Common - hypothetical protein Bcer98_1205 20 COG3601 COG3601, Predicted membrane protein Function unknown 152976563 Common - NUDIX hydrolase Bcer98_2852 123 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152975023 Common - hypothetical protein Bcer98_1223 1 None None None 152975978 Common - anaerobic ribonucleoside-triphosphate reductase activating protein Bcer98_2251 73 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 152977084 Common - molybdenum cofactor synthesis domain Bcer98_3394 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 152974869 Common - 6-pyruvoyl tetrahydropterin synthase and hypothetical protein Bcer98_1065 123 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 152975082 Common - putative RNA methylase Bcer98_1282 135 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 152975368 Pathogen - lipase class 3 Bcer98_1579 3 COG5153 CVT17, Putative lipase essential for disintegration of autophagic bodies inside the vacuole Intracellular trafficking and secretion / Lipid metabolism 152975305 Pathogen - hypothetical protein Bcer98_1514 1 None None None 152976805 Pathogen - hypothetical protein Bcer98_3103 1 None None None 152973948 Common - methyltransferase small Bcer98_0095 72 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 152977386 Common - integral membrane protein Bcer98_3711 3 None None None 152976773 Common - Alkaline phosphatase Bcer98_3069 84 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 152977582 Common - bacitracin transport permease protein BCRB Bcer98_3920 14 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 152974125 Common - geranylgeranylglyceryl phosphate synthase family protein Bcer98_0284 35 COG1646 COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold General function prediction only 152975908 Common - ABC transporter-related protein Bcer98_2178 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152976250 Common - aspartate carbamoyltransferase Bcer98_2538 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 152974057 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0213 145 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 152974437 Common - transcriptional activator, TenA family Bcer98_0612 77 COG0819 TenA, Putative transcription activator Transcription 152976899 Common - transcriptional regulator, TetR family Bcer98_3198 52 COG1309 AcrR, Transcriptional regulator Transcription 152974214 Common - major facilitator superfamily MFS_1 Bcer98_0379 76 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 152974255 Common - helix-turn-helix domain protein Bcer98_0422 3 COG3339 COG3339, Uncharacterized conserved protein Function unknown 152977297 Common - methyl-accepting chemotaxis sensory transducer Bcer98_3620 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152975418 Common - GCN5-related N-acetyltransferase Bcer98_1631 33 COG0456 RimI, Acetyltransferases General function prediction only 152975754 Common - Aminoglycoside N(3')-acetyltransferase Bcer98_2002 24 COG2746 COG2746, Aminoglycoside N3'-acetyltransferase Defense mechanisms 152974615 Common - ABC transporter-related protein Bcer98_0799 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152974713 Common - MATE efflux family protein Bcer98_0901 185 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 152976728 Common - CBS domain containing protein Bcer98_3023 32 COG0517 COG0517, FOG: CBS domain General function prediction only 152977606 Common - glycosyl transferase family 2 Bcer98_3944 180 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152975562 Common - O-methyltransferase family 3 Bcer98_1785 97 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 152976838 Common - Holliday junction DNA helicase RuvB Bcer98_3137 227 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 152976331 Common - YqaJ Bcer98_2619 19 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 152976766 Common - HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 Bcer98_3062 45 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 152975922 Common - LmbE family protein Bcer98_2194 63 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 152976704 Common - phosphate ABC transporter, inner membrane subunit PstC Bcer98_2999 224 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 152977474 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase Bcer98_3806 209 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 152977112 Common - conserved hypothetical radical SAM protein Bcer98_3422 83 COG1242 COG1242, Predicted Fe-S oxidoreductase General function prediction only 152977251 Common - Sporulation protein YunB Bcer98_3570 13 None None None 152975566 Common - phosphotransferase system lactose/cellobiose-specific IIB subunit Bcer98_1789 28 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 152975953 Common - D-alanyl-D-alanine carboxypeptidase Bcer98_2225 5 COG2367 PenP, Beta-lactamase class A Defense mechanisms 152974909 Common - hypothetical protein Bcer98_1105 6 COG5609 COG5609, Uncharacterized conserved protein Function unknown 152975103 Common - uracil-xanthine permease Bcer98_1303 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 152976584 Common - exodeoxyribonuclease VII, large subunit Bcer98_2873 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 152977008 Common - Sporulation protein YtfJ Bcer98_3313 14 COG3874 COG3874, Uncharacterized conserved protein Function unknown 152975499 Pathogen - putative spore germination protein F-related protein Bcer98_1719 1 None None None 152977505 Common - protein tyrosine phosphatase Bcer98_3838 128 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 152975551 Common - protoporphyrinogen oxidase Bcer98_1774 60 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 152976820 Common - aspartyl-tRNA synthetase Bcer98_3118 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976512 Common - alpha/beta hydrolase fold Bcer98_2801 22 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152974375 Common - hypothetical protein Bcer98_0548 6 None None None 152974500 Pathogen - group-specific protein Bcer98_0676 1 None None None 152974761 Common - hypothetical protein Bcer98_0952 13 COG5634 COG5634, Uncharacterized conserved protein Function unknown 152975046 Common - Rieske (2Fe-2S) domain protein Bcer98_1246 51 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 152975374 Common - GCN5-related N-acetyltransferase Bcer98_1586 7 COG3393 COG3393, Predicted acetyltransferase General function prediction only 152977313 Common - Chromosome segregation ATPase-like protein Bcer98_3638 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152977486 Common - NADH-quinone oxidoreductase, B subunit Bcer98_3818 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 152974592 Common - NAD-dependent epimerase/dehydratase Bcer98_0775 218 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152975329 Common - polysaccharide biosynthesis protein Bcer98_1538 67 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152974490 Pathogen - purple acid phosphatase/fibronectin domain protein Bcer98_0665 1 None None None 152974221 Common - stress protein Bcer98_0386 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 152977169 Common - two component transcriptional regulator, winged helix family Bcer98_3483 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976678 Common - protein of unknown function DUF955 Bcer98_2970 8 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 152974228 Pathogen - hypothetical protein Bcer98_0394 1 None None None 152977151 Common - carbonic anhydrase Bcer98_3463 30 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 152976239 Common - domain of unknown function DUF1732 Bcer98_2525 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 152976597 Common - Sporulation stage III protein AA Bcer98_2887 32 COG3854 SpoIIIAA, ncharacterized protein conserved in bacteria Function unknown 152977616 Common - methionine-R-sulfoxide reductase Bcer98_3954 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 152975254 Common - hypothetical protein Bcer98_1459 4 None None None 152975353 Pathogen - hypothetical protein Bcer98_1564 1 None None None 152974020 Common - protein of unknown function DUF323 Bcer98_0172 83 COG1262 COG1262, Uncharacterized conserved protein Function unknown 152975171 Common - glycosyl transferase family 2 Bcer98_1372 131 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152975642 Pathogen - hypothetical protein Bcer98_1876 1 None None None 152976169 Common - Dipicolinic acid synthetase subunit A Bcer98_2455 17 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 152975170 Common - flagellin Bcer98_1371 87 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 152976987 Common - hypothetical protein Bcer98_3290 3 None None None 152974562 Common - hypothetical protein Bcer98_0741 3 None None None 152976043 Common - amidohydrolase Bcer98_2319 175 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 152974618 Common - two component transcriptional regulator, winged helix family Bcer98_0802 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152975994 Common - hypothetical protein Bcer98_2267 2 None None None 152975363 Common - hypothetical protein Bcer98_1574 3 None None None 152974441 Common - thiamine monophosphate synthase Bcer98_0616 72 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 152975139 Common - MotA/TolQ/ExbB proton channel Bcer98_1340 81 COG1291 MotA, Flagellar motor component Cell motility and secretion 152977395 Common - cell division ATP-binding protein FtsE Bcer98_3723 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 152977028 Common - tyrosyl-tRNA synthetase Bcer98_3333 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152977679 Common - Cobyrinic acid ac-diamide synthase Bcer98_4020 233 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 152976265 Common - RNA polymerase, sigma 28 subunit, FliA/WhiG family Bcer98_2553 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 152976906 Common - phage shock protein C, PspC Bcer98_3206 33 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 152977063 Common - polysaccharide biosynthesis protein Bcer98_3370 29 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152974484 Common - hypothetical protein Bcer98_0659 3 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 152976028 Common - serine/threonine protein phosphatase Bcer98_2304 3 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 152974142 Common - Cyclopropane-fatty-acyl-phospholipid synthase Bcer98_0301 137 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 152977104 Pathogen - putative VrrB protein Bcer98_3414 1 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 152975714 Pathogen - hypothetical protein Bcer98_1954 1 None None None 152976938 Common - PHP domain protein Bcer98_3241 93 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 152977573 Common - cell wall hydrolase SleB Bcer98_3911 6 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 152976522 Common - 6,7-dimethyl-8-ribityllumazine synthase Bcer98_2811 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 152975437 Common - electron transport protein SCO1/SenC Bcer98_1650 79 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 152975673 Common - glycine betaine/L-proline ABC transporter, ATPase subunit Bcer98_1908 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 152975976 Common - 2-alkenal reductase Bcer98_2249 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 152976004 Pathogen - hypothetical protein Bcer98_2277 1 None None None 152973985 Common - ABC transporter-related protein Bcer98_0133 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 152974098 Common - Xanthine/uracil/vitamin C permease Bcer98_0254 135 COG2252 COG2252, Permeases General function prediction only 152975097 Pathogen - hypothetical protein Bcer98_1297 1 None None None 152975471 Common - GCN5-related N-acetyltransferase Bcer98_1686 21 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 152974570 Common - protein of unknown function DUF161 Bcer98_0749 22 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152975678 Common - GCN5-related N-acetyltransferase Bcer98_1914 83 COG2153 ElaA, Predicted acyltransferase General function prediction only 152976880 Common - Uroporphyrinogen III synthase HEM4 Bcer98_3179 113 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 152975440 Common - GCN5-related N-acetyltransferase Bcer98_1653 2 None None None 152976821 Common - histidyl-tRNA synthetase Bcer98_3119 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152973915 Common - Hsp33 protein Bcer98_0062 140 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 152975726 Pathogen - hypothetical protein Bcer98_1968 2 None None None 152977202 Common - hypothetical protein Bcer98_3519 2 None None None 152974496 Common - phosphotransferase system EIIC Bcer98_0671 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 152977493 Common - ATP synthase F1, gamma subunit Bcer98_3826 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 152974645 Common - beta-lactamase regulatory protein 1; methicillin resistance protein Bcer98_0832 2 COG4219 MecR1, Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component Transcription / Signal transduction mechanisms 152977312 Common - hypothetical protein Bcer98_3637 27 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152974229 Common - putative ribonuclease BN Bcer98_0395 77 COG1295 Rbn, Predicted membrane protein Function unknown 152975162 Common - conserved hypothetical cytosolic protein Bcer98_1363 2 None None None 152975070 Common - endonuclease III Bcer98_1270 240 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 152974016 Common - hypothetical protein Bcer98_0168 4 None None None 152975198 Pathogen - hypothetical protein Bcer98_1399 1 None None None 152977086 Common - UBA/THIF-type NAD/FAD binding protein Bcer98_3396 211 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 152977300 Common - Pirin domain protein Bcer98_3623 144 COG1741 COG1741, Pirin-related protein General function prediction only 152975624 Common - NUDIX hydrolase Bcer98_1856 38 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152975852 Pathogen - hypothetical protein Bcer98_2111 1 None None None 152977376 Common - thioredoxin reductase Bcer98_3701 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 152975389 Common - regulatory protein ArsR Bcer98_1602 169 COG0640 ArsR, Predicted transcriptional regulators Transcription 152977174 Common - O-succinylbenzoate-CoA ligase Bcer98_3490 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152974772 Common - transcriptional regulator, LysR family Bcer98_0963 181 COG0583 LysR, Transcriptional regulator Transcription 152976163 Common - beta-lactamase domain protein Bcer98_2449 160 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 152974707 Common - tryptophanyl-tRNA synthetase Bcer98_0894 232 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976688 Common - methionine synthase Bcer98_2983 179 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 152975943 Common - FAD linked oxidase domain protein Bcer98_2215 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 152977600 Common - methyl-accepting chemotaxis sensory transducer Bcer98_3938 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152975639 Pathogen - hypothetical protein Bcer98_1873 1 None None None 152975182 Common - type III secretion system inner membrane R protein Bcer98_1383 93 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 152974985 Common - phage integrase family protein Bcer98_1185 103 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152974271 Common - Protein of unknown function DUF1811 Bcer98_0438 4 None None None 152976551 Common - DNA-directed DNA polymerase Bcer98_2840 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 152976269 Pathogen - hypothetical protein Bcer98_2557 1 None None None 152974544 Common - Enoyl-CoA hydratase/isomerase Bcer98_0721 184 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 152976346 Common - hypothetical protein Bcer98_2634 3 None None None 152973895 Common - putative endoribonuclease L-PSP Bcer98_0042 187 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 152976242 Common - hypothetical protein Bcer98_2529 2 None None None 152974281 Common - hypothetical protein Bcer98_0448 1 None None None 152975179 Common - hypothetical protein Bcer98_1380 2 None None None 152977121 Common - putative acetyltransferase/acyltransferase Bcer98_3431 184 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 152976783 Common - GCN5-related N-acetyltransferase Bcer98_3081 94 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152974938 Common - phosphoribosyl-ATP pyrophosphohydrolase Bcer98_1135 190 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 152977461 Common - integral membrane sensor signal transduction histidine kinase Bcer98_3793 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974178 Common - fatty acid desaturase Bcer98_0342 29 COG3239 DesA, Fatty acid desaturase Lipid metabolism 152974811 Common - spermidine/putrescine ABC transporter ATPase subunit Bcer98_1007 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 152974940 Common - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bcer98_1137 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 152977030 Common - acetoin utilization protein Bcer98_3336 8 None None None 152974563 Common - hypothetical protein Bcer98_0742 5 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152975464 Common - protein of unknown function DUF1694 Bcer98_1679 10 COG5506 COG5506, Uncharacterized conserved protein Function unknown 152975390 Common - arsenical-resistance protein Bcer98_1603 141 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 152976415 Common - drug resistance transporter, EmrB/QacA subfamily Bcer98_2703 214 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976960 Common - Sporulation protein YtxC Bcer98_3263 15 None None None 152974608 Pathogen - hypothetical protein Bcer98_0792 1 None None None 152976617 Common - putative ABC transporter permease component Bcer98_2908 3 None None None 152975632 Pathogen - hypothetical protein Bcer98_1866 1 None None None 152977450 Common - ComK family protein Bcer98_3782 4 COG4903 ComK, Genetic competence transcription factor Transcription 152974342 Common - regulatory protein ArsR Bcer98_0511 183 COG0640 ArsR, Predicted transcriptional regulators Transcription 152977633 Common - Abortive infection protein Bcer98_3974 7 COG4449 COG4449, Predicted protease of the Abi (CAAX) family General function prediction only 152974741 Common - Methyltransferase type 11 Bcer98_0929 15 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 152975475 Common - protein of unknown function DUF1250 Bcer98_1690 12 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 152977357 Common - glyceraldehyde-3-phosphate dehydrogenase, type I Bcer98_3682 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 152974060 Common - ABC-2 type transporter Bcer98_0216 23 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 152974313 Common - Recombinase Bcer98_0480 80 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152973866 Common - seryl-tRNA synthetase Bcer98_0012 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 152977074 Common - hypothetical protein Bcer98_3384 23 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974635 Common - membrane-flanked domain Bcer98_0821 32 COG3428 COG3428, Predicted membrane protein Function unknown 152976105 Common - Collagen triple helix repeat Bcer98_2389 2 None None None 152974356 Common - aspartate ammonia-lyase Bcer98_0526 238 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 152974920 Pathogen - hypothetical protein Bcer98_1116 1 None None None 152974669 Common - ComK family protein Bcer98_0856 5 COG4903 ComK, Genetic competence transcription factor Transcription 152976932 Common - hypothetical protein Bcer98_3235 22 COG4895 COG4895, Uncharacterized conserved protein Function unknown 152977043 Common - nicotinate phosphoribosyltransferase Bcer98_3350 107 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 152974381 Common - ABC transporter-related protein Bcer98_0554 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 152975897 Common - ABC transporter-related protein Bcer98_2165 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152977398 Common - preprotein translocase, SecA subunit Bcer98_3726 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 152976057 Common - ABC transporter-related protein Bcer98_2333 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152974025 Common - protein of unknown function DUF201 Bcer98_0177 18 COG0439 AccC, Biotin carboxylase Lipid metabolism 152974519 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0696 128 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 152975981 Common - HesB/YadR/YfhF-family protein Bcer98_2254 7 COG4841 COG4841, Uncharacterized protein conserved in bacteria Function unknown 152977680 Common - parB-like partition protein Bcer98_4021 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 152974460 Common - protein of unknown function DUF1540 Bcer98_0635 4 None None None 152975446 Common - isochorismatase hydrolase Bcer98_1659 73 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 152973874 Common - conserved hypothetical cytosolic protein Bcer98_0021 5 None None None 152976188 Common - Phosphatidate cytidylyltransferase Bcer98_2474 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 152976845 Common - nicotinate-nucleotide pyrophosphorylase Bcer98_3144 203 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 152975791 Common - Ornithine cyclodeaminase Bcer98_2042 98 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 152974751 Pathogen - hypothetical protein Bcer98_0941 1 None None None 152975399 Common - metal dependent phosphohydrolase Bcer98_1612 64 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 152975421 Common - ABC transporter-related protein Bcer98_1634 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152974574 Pathogen - hypothetical protein Bcer98_0756 1 None None None 152974848 Common - poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit Bcer98_1044 80 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 152974453 Common - major facilitator superfamily MFS_1 Bcer98_0628 200 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976947 Common - tRNA/rRNA methyltransferase (SpoU) Bcer98_3250 214 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 152974056 Pathogen - invasion protein IagB domain protein Bcer98_0212 1 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 152977626 Common - transcriptional antiterminator, BglG Bcer98_3966 11 COG3711 BglG, Transcriptional antiterminator Transcription 152974880 Common - Ribonucleoside-diphosphate reductase Bcer98_1076 149 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 152977246 Common - putative transcriptional regulator, MerR family Bcer98_3564 110 COG0789 SoxR, Predicted transcriptional regulators Transcription 152975131 Common - potassium efflux system protein Bcer98_1332 213 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 152977256 Common - cysteine desulfurase, SufS subfamily Bcer98_3577 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 152976679 Common - Resolvase domain Bcer98_2971 134 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152977373 Common - uncharacterised P-loop ATPase protein UPF0042 Bcer98_3698 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 152975695 Common - hypothetical protein Bcer98_1932 2 None None None 152976286 Common - protein of unknown function DUF177 Bcer98_2574 19 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 152976856 Common - GTP-binding protein Obg/CgtA Bcer98_3155 249 COG0536 Obg, Predicted GTPase General function prediction only 152977457 Common - cell wall hydrolase/autolysin Bcer98_3789 117 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152976514 Common - regulatory protein LacI Bcer98_2803 125 COG1609 PurR, Transcriptional regulators Transcription 152973856 Common - DNA polymerase III, beta subunit Bcer98_0002 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 152976578 Common - DNA repair protein RecN Bcer98_2867 215 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 152974485 Common - hypothetical protein Bcer98_0660 3 None None None 152976659 Common - protein of unknown function DUF1064 Bcer98_2950 8 None None None 152974902 Common - hypothetical protein Bcer98_1098 2 None None None 152974879 Common - Ribonucleoside-diphosphate reductase Bcer98_1075 207 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 152976374 Common - protein of unknown function DUF1054 Bcer98_2662 9 COG4493 COG4493, Uncharacterized protein conserved in bacteria Function unknown 152974674 Common - spore germination protein PF Bcer98_0861 2 None None None 152975077 Common - hypothetical protein Bcer98_1277 2 None None None 152976295 Pathogen - XpaF1 protein Bcer98_2583 1 None None None 152977672 Common - single-strand binding protein Bcer98_4013 216 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 152974164 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bcer98_0324 6 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 152977487 Common - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 Bcer98_3819 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 152974748 Common - dTDP-4-dehydrorhamnose 3,5-epimerase Bcer98_0938 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 152975558 Common - ABC transporter-related protein Bcer98_1781 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152975885 Common - hypothetical protein Bcer98_2149 11 None None None 152977562 Common - metal dependent phosphohydrolase Bcer98_3900 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 152974841 Common - potassium uptake protein, TrkH family Bcer98_1037 87 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 152975346 Common - GCN5-related N-acetyltransferase Bcer98_1556 71 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152975931 Common - transcriptional regulator, LysR family Bcer98_2203 189 COG0583 LysR, Transcriptional regulator Transcription 152974893 Common - DltD domain protein Bcer98_1089 13 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 152974508 Common - aldehyde dehydrogenase Bcer98_0684 227 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152977039 Common - peptidase M29 aminopeptidase II Bcer98_3346 64 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 152974069 Pathogen - hypothetical protein Bcer98_0225 1 None None None 152975940 Common - chitin-binding domain 3 protein Bcer98_2212 44 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 152975665 Pathogen - hypothetical protein Bcer98_1899 1 None None None 152974531 Common - hypothetical protein Bcer98_0708 2 None None None 152975338 Common - protein of unknown function DUF456 Bcer98_1547 4 COG2839 COG2839, Uncharacterized protein conserved in bacteria Function unknown 152977554 Pathogen - hypothetical protein Bcer98_3891 1 None None None 152974834 Common - alpha/beta hydrolase fold Bcer98_1030 50 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152974727 Common - NAD(+) kinase Bcer98_0915 223 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 152977609 Common - glycosyl transferase family 2 Bcer98_3947 222 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152976774 Common - GCN5-related N-acetyltransferase Bcer98_3070 17 COG0456 RimI, Acetyltransferases General function prediction only 152974380 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0553 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152976473 Common - Cof-like hydrolase Bcer98_2762 101 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152977341 Common - transcriptional regulator, TetR family Bcer98_3666 29 COG1309 AcrR, Transcriptional regulator Transcription 152973902 Common - transcriptional regulator, AbrB family Bcer98_0049 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 152976798 Common - O-methyltransferase family 3 Bcer98_3096 107 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 152975283 Pathogen - hypothetical protein Bcer98_1489 1 None None None 152975593 Common - purine or other phosphorylase family 1 Bcer98_1818 82 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 152974299 Common - glycosyl transferase family 51 Bcer98_0466 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 152975056 Common - Dihydrodipicolinate reductase Bcer98_1256 216 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 152975452 Common - glycosyl transferase family 2 Bcer98_1666 43 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152976187 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase Bcer98_2473 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 152976364 Common - hypothetical protein Bcer98_2652 4 None None None 152974540 Common - membrane bound O-acyl transferase MBOAT family protein Bcer98_0717 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 152974719 Common - phospholipase D/Transphosphatidylase Bcer98_0907 154 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 152977472 Common - LytTr DNA-binding region Bcer98_3804 246 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152974824 Common - lipoprotein, putative Bcer98_1020 41 COG3391 COG3391, Uncharacterized conserved protein Function unknown 152977324 Common - CrcB protein Bcer98_3649 8 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 152975577 Common - aminoacyl-histidine dipeptidase Bcer98_1800 52 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 152976496 Common - purine nucleoside phosphorylase I, inosine and guanosine-specific Bcer98_2785 166 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 152974000 Common - protein of unknown function DUF147 Bcer98_0148 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 152976358 Common - Cytochrome c oxidase subunit II Bcer98_2646 158 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 152975486 Common - 40-residue YVTN family beta-propeller repeat protein Bcer98_1704 103 COG3391 COG3391, Uncharacterized conserved protein Function unknown 152977535 Common - two component transcriptional regulator, LuxR family Bcer98_3871 208 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 152976612 Common - periplasmic binding protein/LacI transcriptional regulator Bcer98_2902 127 COG1609 PurR, Transcriptional regulators Transcription 152975508 Common - 3-hydroxyisobutyrate dehydrogenase Bcer98_1728 174 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 152977409 Pathogen - hypothetical protein Bcer98_3737 1 None None None 152973889 Common - dimethyladenosine transferase Bcer98_0036 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 152974556 Common - conserved hypothetical membrane spanning protein Bcer98_0734 3 COG5444 COG5444, Uncharacterized conserved protein Function unknown 152975587 Common - glycosyl transferase family 2 Bcer98_1810 118 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152975919 Common - hypothetical protein Bcer98_2190 8 None None None 152974962 Common - integral membrane sensor signal transduction histidine kinase Bcer98_1159 137 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 152975512 Common - Enoyl-CoA hydratase/isomerase Bcer98_1732 169 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 152974186 Common - arginine/ornithine antiporter Bcer98_0350 80 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 152976141 Common - Membrane dipeptidase Bcer98_2427 104 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 152974363 Common - von Willebrand factor type A Bcer98_0535 19 COG4548 NorD, Nitric oxide reductase activation protein Inorganic ion transport and metabolism 152976795 Common - uridine kinase Bcer98_3093 88 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 152975880 Common - protein of unknown function DUF1272 Bcer98_2140 24 COG3813 COG3813, Uncharacterized protein conserved in bacteria Function unknown 152975887 Common - hypothetical protein Bcer98_2152 1 None None None 152977408 Common - putative transposase Bcer98_3736 2 None None None 152974328 Common - response regulator receiver Bcer98_0497 220 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 152975681 Common - alpha/beta hydrolase Bcer98_1918 10 COG1647 COG1647, Esterase/lipase General function prediction only 152976432 Pathogen - hypothetical protein Bcer98_2720 1 None None None 152976666 Pathogen - hypothetical protein Bcer98_2957 1 None None None 152974601 Common - glycoside hydrolase family 1 Bcer98_0785 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 152976716 Common - hypothetical protein Bcer98_3011 3 None None None 152976521 Common - 3,4-dihydroxy-2-butanone 4-phosphate synthase Bcer98_2810 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 152976817 Common - helix-turn-helix- domain containing protein AraC type Bcer98_3115 68 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 152975225 Common - transcriptional regulator, TetR family Bcer98_1428 124 COG1309 AcrR, Transcriptional regulator Transcription 152976508 Common - protein of unknown function UPF0157 Bcer98_2797 43 COG2320 GrpB, Uncharacterized conserved protein Function unknown 152976194 Common - GTP-sensing transcriptional pleiotropic repressor CodY Bcer98_2480 20 COG4465 CodY, Pleiotropic transcriptional repressor Transcription 152975315 Common - cobalamin synthesis protein P47K Bcer98_1524 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 152974970 Common - hypothetical protein Bcer98_1167 2 None None None 152976114 Pathogen - hypothetical protein Bcer98_2398 1 None None None 152973865 Common - SNO glutamine amidotransferase Bcer98_0011 90 COG0311 PDX2, Predicted glutamine amidotransferase involved in pyridoxine biosynthesis Coenzyme metabolism 152974991 Common - hypothetical protein Bcer98_1191 1 None None None 152976760 Common - iojap-like protein Bcer98_3056 193 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 152977131 Common - hypothetical protein Bcer98_3442 3 COG4918 COG4918, Uncharacterized protein conserved in bacteria Function unknown 152976835 Common - queuine tRNA-ribosyltransferase Bcer98_3134 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 152977012 Common - AMP-dependent synthetase and ligase Bcer98_3317 223 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 152974107 Common - protein of unknown function DUF6 transmembrane Bcer98_0265 183 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 152975248 Common - General substrate transporter Bcer98_1453 144 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152977180 Common - transcriptional regulator, TraR/DksA family Bcer98_3496 86 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 152975604 Common - transposase Bcer98_1833 4 None None None 152974818 Common - pseudouridine synthase, RluA family Bcer98_1014 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 152976475 Common - stage V sporulation protein AE, C-terminal region Bcer98_2764 7 None None None 152974133 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0292 101 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 152974968 Pathogen - hypothetical protein Bcer98_1165 1 None None None 152975226 Common - protoheme IX farnesyltransferase Bcer98_1429 167 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 152974191 Common - PTS system, IIBC subunit Bcer98_0355 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 152976910 Common - OmpA/MotB domain protein Bcer98_3211 157 COG1360 MotB, Flagellar motor protein Cell motility and secretion 152974206 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0370 196 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 152976214 Common - chromosome segregation protein SMC Bcer98_2500 199 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152974545 Common - hypothetical protein Bcer98_0722 10 COG4997 COG4997, Uncharacterized conserved protein Function unknown 152975650 Common - major facilitator superfamily MFS_1 Bcer98_1884 46 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152973949 Common - DNA-directed RNA polymerase, beta' subunit Bcer98_0097 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 152974552 Pathogen - signal transduction histidine kinase, LytS Bcer98_0729 1 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 152976969 Common - DNA polymerase I Bcer98_3272 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 152976095 Common - integrase, catalytic region Bcer98_2375 16 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 152977596 Common - glycosyl transferase, WecB/TagA/CpsF family Bcer98_3934 110 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 152976094 Common - YCII-related Bcer98_2373 37 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 152976810 Common - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Bcer98_3108 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 152975292 Common - cell envelope-related transcriptional attenuator Bcer98_1499 64 COG1316 LytR, Transcriptional regulator Transcription 152975430 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase Bcer98_1643 209 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 152976016 Pathogen - putative secreted protein Bcer98_2289 2 None None None 152975840 Common - hypothetical protein Bcer98_2099 2 None None None 152976974 Common - isocitrate dehydrogenase, NADP-dependent Bcer98_3277 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 152974511 Common - extracellular solute-binding protein family 3 Bcer98_0687 183 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 152977354 Common - phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Bcer98_3679 126 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 152974993 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_1193 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152974378 Common - extracellular solute-binding protein family 5 Bcer98_0551 200 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 152976270 Common - Polypeptide-transport-associated domain protein FtsQ-type Bcer98_2558 18 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 152975331 Common - permease Bcer98_1540 82 COG0701 COG0701, Predicted permeases General function prediction only 152975004 Pathogen - hypothetical protein Bcer98_1204 1 None None None 152975485 Common - Thioredoxin domain Bcer98_1701 172 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 152974226 Pathogen - hypothetical protein Bcer98_0392 1 None None None 152975297 Common - small acid-soluble spore protein alpha/beta type Bcer98_1504 10 None None None 152974327 Common - signal transduction histidine kinase regulating citrate/malate metabolism Bcer98_0496 168 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 152974414 Common - Cytochrome aa3 quinol oxidase subunit IV Bcer98_0588 5 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 152974333 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0502 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152975923 Common - Protein of unknown function DUF1806 Bcer98_2195 5 None None None 152976495 Common - pyrimidine-nucleoside phosphorylase Bcer98_2784 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 152974768 Common - group-specific protein Bcer98_0959 2 None None None 152975065 Common - DnaQ family exonuclease/DinG family helicase, putative Bcer98_1265 221 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 152976177 Common - ribosome-binding factor A Bcer98_2463 200 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 152976229 Common - Protein phosphatase 2C-like protein Bcer98_2515 138 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 152974710 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0898 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152974963 Common - two component transcriptional regulator, LuxR family Bcer98_1160 213 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 152973959 Common - ribosomal protein L2 Bcer98_0107 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 152974687 Common - Catalase Bcer98_0874 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 152976066 Common - protein of unknown function DUF896 Bcer98_2342 7 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 152974782 Common - 5-carboxymethyl-2-hydroxymuconate isomerase Bcer98_0973 32 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 152974948 Common - Adenylyl-sulfate kinase Bcer98_1145 145 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 152977568 Common - Transcription factor RsfA Bcer98_3906 3 None None None 152977529 Common - 3-hydroxybutyryl-CoA dehydrogenase Bcer98_3864 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 152974874 Common - GCN5-related N-acetyltransferase Bcer98_1070 26 COG0456 RimI, Acetyltransferases General function prediction only 152975601 Common - fatty acid desaturase Bcer98_1829 8 COG3239 DesA, Fatty acid desaturase Lipid metabolism 152975591 Common - two component transcriptional regulator, winged helix family Bcer98_1815 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152974248 Common - transcriptional regulator, TetR family Bcer98_0414 56 COG1309 AcrR, Transcriptional regulator Transcription 152974971 Common - transcriptional antiterminator, BglG Bcer98_1169 50 COG3711 BglG, Transcriptional antiterminator Transcription 152975769 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_2018 18 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152974150 Common - polysaccharide deacetylase Bcer98_0309 42 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152977228 Common - nucleoside transporter Bcer98_3546 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 152974419 Common - hypothetical protein Bcer98_0593 6 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 152977464 Common - cell envelope-related transcriptional attenuator Bcer98_3796 59 COG1316 LytR, Transcriptional regulator Transcription 152975511 Common - Lysine exporter protein (LYSE/YGGA) Bcer98_1731 125 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 152975238 Common - hypothetical protein Bcer98_1441 7 None None None 152976193 Common - ribosomal protein S2 Bcer98_2479 242 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 152974149 Common - peptidase M29 aminopeptidase II Bcer98_0308 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 152975212 Pathogen - hypothetical protein Bcer98_1413 1 None None None 152975613 Common - preprotein translocase, SecY subunit Bcer98_1843 229 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 152973907 Common - Spore cortex biosynthesis protein YabQ Bcer98_0054 11 None None None 152977103 Pathogen - hypothetical protein Bcer98_3413 1 None None None 152974831 Common - peptidase A24A domain protein Bcer98_1027 133 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 152974428 Common - FeoA family protein Bcer98_0602 45 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 152976115 Pathogen - hypothetical protein Bcer98_2399 1 None None None 152973857 Common - S4 region YaaA family protein Bcer98_0003 35 COG2501 COG2501, Uncharacterized conserved protein Function unknown 152975067 Common - hypothetical protein Bcer98_1267 7 COG5353 COG5353, Uncharacterized protein conserved in bacteria Function unknown 152974569 Common - hypothetical protein Bcer98_0748 37 None None None 152974587 Common - hypothetical protein Bcer98_0769 30 COG0824 FcbC, Predicted thioesterase General function prediction only 152975245 Common - protein of unknown function DUF554 Bcer98_1448 46 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 152976140 Common - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Bcer98_2426 116 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 152975760 Common - putative sugar-specific permease SgaT/UlaA Bcer98_2009 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 152974864 Common - transcriptional regulator, MarR family Bcer98_1060 112 COG1846 MarR, Transcriptional regulators Transcription 152976648 Pathogen - hypothetical protein Bcer98_2939 1 None None None 152976853 Common - ABC transporter-related protein Bcer98_3152 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152977420 Common - YdjC family protein Bcer98_3750 48 COG3394 COG3394, Uncharacterized protein conserved in bacteria Function unknown 152973938 Common - ribonuclease III Bcer98_0085 38 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 152974941 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase Bcer98_1138 153 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 152975142 Common - CheA signal transduction histidine kinase Bcer98_1343 177 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 152975428 Common - Peptidoglycan glycosyltransferase Bcer98_1641 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 152976120 Common - protein of unknown function DUF156 Bcer98_2404 102 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 152975268 Common - chromate transporter, chromate ion transporter (CHR) family Bcer98_1474 100 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 152977258 Common - FeS assembly ATPase SufC Bcer98_3579 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 152975029 Common - hypothetical protein Bcer98_1229 3 None None None 152976127 Common - peptidase T Bcer98_2411 60 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 152975835 Common - protein of unknown function DUF600 Bcer98_2094 2 None None None 152977651 Common - Resolvase domain Bcer98_3992 141 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152975178 Common - surface presentation of antigens (SPOA) protein Bcer98_1379 82 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 152976876 Common - Spore coat protein YsxE Bcer98_3175 4 None None None 152974106 Common - two component transcriptional regulator, winged helix family Bcer98_0264 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152975375 Common - Sporulation protein YtfJ Bcer98_1587 18 COG3874 COG3874, Uncharacterized conserved protein Function unknown 152977099 Common - spore germination protein Bcer98_3409 15 None None None 152974015 Pathogen - Abortive infection protein Bcer98_0165 4 None None None 152976487 Common - ABC transporter-related protein Bcer98_2776 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152976707 Common - major facilitator superfamily MFS_1 Bcer98_3002 4 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 152976154 Common - inner-membrane translocator Bcer98_2440 145 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 152973924 Common - putative TIM-barrel protein, nifR3 family Bcer98_0071 218 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 152974158 Pathogen - hypothetical protein Bcer98_0318 1 None None None 152974397 Common - FAD-linked oxidoreductase Bcer98_0570 50 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 152976071 Common - transcriptional regulator, PadR-like family Bcer98_2347 71 COG1695 COG1695, Predicted transcriptional regulators Transcription 152974246 Common - RNA methyltransferase, TrmA family Bcer98_0412 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 152974915 Common - hypothetical protein Bcer98_1111 10 None None None 152975271 Common - iron-containing alcohol dehydrogenase Bcer98_1477 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 152975102 Common - xanthine phosphoribosyltransferase Bcer98_1302 124 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 152976667 Common - DNA replication protein-like protein Bcer98_2958 13 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 152976602 Common - peptidase M24 Bcer98_2892 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 152973975 Common - ribosomal protein L15 Bcer98_0123 218 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 152974459 Pathogen - group-specific protein Bcer98_0634 1 None None None 152977418 Common - sigma-54 factor interaction domain-containing protein Bcer98_3748 165 COG3933 COG3933, Transcriptional antiterminator Transcription 152974990 Common - hypothetical protein Bcer98_1190 2 None None None 152974927 Common - 2-isopropylmalate synthase Bcer98_1123 218 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 152976305 Common - phage major capsid protein, HK97 family Bcer98_2593 11 None None None 152977404 Common - transcriptional regulator, HxlR family Bcer98_3732 148 COG1733 COG1733, Predicted transcriptional regulators Transcription 152974201 Pathogen - hypothetical protein Bcer98_0365 1 None None None 152973988 Common - tRNA pseudouridine synthase A Bcer98_0136 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 152975868 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase Bcer98_2128 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 152974036 Common - extracellular solute-binding protein family 5 Bcer98_0190 200 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152977630 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcer98_3970 9 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 152976984 Common - Malate dehydrogenase (oxaloacetate-decarboxylating) Bcer98_3287 201 COG0281 SfcA, Malic enzyme Energy production and conversion 152976225 Common - thiamine pyrophosphokinase Bcer98_2511 48 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 152975747 Common - protein of unknown function UPF0118 Bcer98_1995 212 COG0628 PerM, Predicted permease General function prediction only 152975122 Common - protein of unknown function DUF988 Bcer98_1323 18 COG4708 COG4708, Predicted membrane protein Function unknown 152975578 Pathogen - hypothetical protein Bcer98_1801 1 None None None 152976420 Common - integral membrane sensor signal transduction histidine kinase Bcer98_2708 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974982 Common - signal transduction histidine kinase, nitrogen specific, NtrB Bcer98_1182 222 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 152977583 Common - ABC transporter-related protein Bcer98_3921 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152977083 Common - molybdopterin-guanine dinucleotide biosynthesis protein B Bcer98_3393 81 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 152974520 Common - two component transcriptional regulator, LuxR family Bcer98_0697 196 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 152976767 Common - Sporulation inhibitor A Bcer98_3063 2 None None None 152976638 Common - hypothetical protein Bcer98_2929 8 None None None 152975403 Common - PBS lyase HEAT domain protein repeat-containing protein Bcer98_1616 33 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 152975734 Common - Transglycosylase-associated protein Bcer98_1980 5 COG2261 COG2261, Predicted membrane protein Function unknown 152974074 Common - homogentisate 12-dioxygenase Bcer98_0230 42 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 152976359 Common - protoheme IX farnesyltransferase Bcer98_2647 171 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 152976315 Common - phage transcriptional regulator, ArpU family Bcer98_2603 1 None None None 152975219 Common - protein of unknown function DUF445 Bcer98_1421 57 COG2733 COG2733, Predicted membrane protein Function unknown 152974700 Common - hypothetical protein Bcer98_0887 2 COG2267 PldB, Lysophospholipase Lipid metabolism 152975861 Common - putative ABC transporter, permease Bcer98_2121 11 None None None 152977218 Common - NUDIX hydrolase Bcer98_3536 86 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152974691 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Bcer98_0878 162 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 152976046 Common - LrgB family protein Bcer98_2322 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 152977323 Common - nuclear protein SET Bcer98_3648 8 COG2940 COG2940, Proteins containing SET domain General function prediction only 152976520 Common - riboflavin synthase, alpha subunit Bcer98_2809 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 152977590 Common - protein of unknown function DUF466 Bcer98_3928 27 COG2879 COG2879, Uncharacterized small protein Function unknown 152975348 Common - NUDIX hydrolase Bcer98_1558 5 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152976802 Common - protein of unknown function DUF965 Bcer98_3100 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 152977384 Common - excinuclease ABC, A subunit Bcer98_3709 245 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 152975565 Common - protein of unknown function DUF187 Bcer98_1788 39 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 152976596 Common - Sporulation stage III protein AB Bcer98_2886 14 None None None 152976729 Common - DNA repair protein RecO Bcer98_3024 85 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 152974023 Pathogen - hypothetical protein Bcer98_0175 1 None None None 152977120 Common - alpha/beta hydrolase fold Bcer98_3430 93 COG2267 PldB, Lysophospholipase Lipid metabolism 152975526 Common - ABC-2 type transport system permease protein Bcer98_1747 9 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 152977296 Common - methyl-accepting chemotaxis sensory transducer Bcer98_3619 164 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152975417 Common - protein of unknown function UPF0066 Bcer98_1630 96 COG1720 COG1720, Uncharacterized conserved protein Function unknown 152974858 Pathogen - hypothetical protein Bcer98_1054 1 None None None 152974314 Common - hypothetical protein Bcer98_0481 2 None None None 152977113 Common - putative rRNA methylase Bcer98_3423 29 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 152975952 Common - argininosuccinate lyase Bcer98_2224 218 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 152976599 Common - acetyltransferase, GNAT family Bcer98_2889 17 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152974063 Common - extracellular solute-binding protein family 5 Bcer98_0219 213 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 152976585 Common - Methenyltetrahydrofolate cyclohydrolase Bcer98_2874 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 152977360 Common - RNA polymerase, sigma 54 subunit, RpoN Bcer98_3685 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 152974885 Common - bacitracin transport permease protein BCRB Bcer98_1081 19 COG4200 COG4200, Uncharacterized protein conserved in bacteria Function unknown 152976170 Common - Sporulation protein YlmC/YmxH Bcer98_2456 15 COG1873 COG1873, Uncharacterized conserved protein Function unknown 152975643 Common - aspartate racemase Bcer98_1877 86 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 152977544 Common - peptidase U61 LD-carboxypeptidase A Bcer98_3880 83 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 152977619 Common - LrgA family protein Bcer98_3957 20 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 152977504 Common - sugar-phosphate isomerase, RpiB/LacA/LacB family Bcer98_3837 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 152977520 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase Bcer98_3855 210 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 152977632 Common - Radical SAM domain protein Bcer98_3973 59 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 152975172 Common - glycosyl transferase group 1 Bcer98_1373 220 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 152976513 Common - Na+ antiporter NhaC Bcer98_2802 29 COG2056 COG2056, Predicted permease General function prediction only 152977473 Common - Sporulation stage II protein D firmicutes Bcer98_3805 46 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 152974080 Common - holo-acyl-carrier-protein synthase Bcer98_0236 164 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 152976205 Common - signal peptidase I Bcer98_2491 203 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 152975045 Common - hypothetical protein Bcer98_1245 3 None None None 152975755 Common - GCN5-related N-acetyltransferase Bcer98_2004 2 COG0456 RimI, Acetyltransferases General function prediction only 152976266 Common - peptidase U4 sporulation factor SpoIIGA Bcer98_2554 15 None None None 152977150 Common - protein of unknown function DUF37 Bcer98_3462 188 COG0759 COG0759, Uncharacterized conserved protein Function unknown 152977059 Common - 2'-5' RNA ligase Bcer98_3366 117 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 152974760 Common - L-lactate permease Bcer98_0951 105 COG1620 LldP, L-lactate permease Energy production and conversion 152975912 Pathogen - hypothetical protein Bcer98_2183 1 None None None 152974491 Pathogen - hypothetical protein Bcer98_0666 1 None None None 152977157 Common - group-specific protein Bcer98_3469 3 None None None 152975253 Common - GCN5-related N-acetyltransferase Bcer98_1458 19 COG3393 COG3393, Predicted acetyltransferase General function prediction only 152974593 Common - C-methyltransferase Bcer98_0776 48 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 152975659 Common - Na+/myo-inositol cotransporter Bcer98_1893 84 COG4146 COG4146, Predicted symporter General function prediction only 152976926 Common - DinB family protein Bcer98_3228 5 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 152975534 Common - 2,3-dihydroxybenzoate-AMP ligase Bcer98_1756 222 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 152975831 Common - hypothetical protein Bcer98_2089 9 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 152977114 Common - ABC transporter-related protein Bcer98_3424 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152976180 Common - ribosomal protein L7Ae/L30e/S12e/Gadd45 Bcer98_2466 23 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 152975963 Pathogen - hypothetical protein Bcer98_2236 1 None None None 152975561 Pathogen - hypothetical protein Bcer98_1784 1 None None None 152977586 Common - Homoserine O-succinyltransferase Bcer98_3924 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 152976339 Common - phage integrase family protein Bcer98_2627 140 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152975328 Common - SNARE associated Golgi protein Bcer98_1537 158 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 152975352 Common - alanine racemase Bcer98_1563 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 152975909 Common - hypothetical protein Bcer98_2179 2 COG3863 COG3863, Uncharacterized distant relative of cell wall-associated hydrolases Function unknown 152975316 Common - GCN5-related N-acetyltransferase Bcer98_1525 18 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152977629 Pathogen - hypothetical protein Bcer98_3969 1 None None None 152976656 Common - phage terminase, large subunit, PBSX family Bcer98_2947 18 COG1783 XtmB, Phage terminase large subunit General function prediction only 152974241 Common - YfkB-like domain protein Bcer98_0407 9 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 152977443 Pathogen - group-specific protein Bcer98_3774 1 None None None 152974329 Common - Citrate carrier protein Bcer98_0498 30 COG3493 CitS, Na+/citrate symporter Energy production and conversion 152976147 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Bcer98_2433 205 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 152975559 Common - ABC transporter-related protein Bcer98_1782 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152974688 Common - alpha amylase catalytic region Bcer98_0875 141 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 152977331 Common - spore germination protein Bcer98_3656 15 None None None 152977436 Common - D-amino acid aminotransferase Bcer98_3767 185 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 152975520 Pathogen - hypothetical protein Bcer98_1741 1 None None None 152977249 Common - lipoic acid synthetase Bcer98_3568 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 152974194 Common - DNA topoisomerase III Bcer98_0358 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 152976592 Common - Sporulation stage III protein AF Bcer98_2882 3 None None None 152976396 Common - transcriptional regulator, LysR family Bcer98_2684 191 COG0583 LysR, Transcriptional regulator Transcription 152976540 Common - N-acetyl-gamma-glutamyl-phosphate reductase Bcer98_2829 221 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 152976631 Common - Shikimate kinase Bcer98_2922 206 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 152976928 Common - ABC transporter-related protein Bcer98_3231 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975054 Common - protein of unknown function DUF161 Bcer98_1254 49 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152975928 Common - N-acetyltransferase Bcer98_2200 41 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 152977232 Common - putative transcriptional regulator, XRE family Bcer98_3550 51 COG3655 COG3655, Predicted transcriptional regulator Transcription 152974597 Common - spore maturation protein CgeB, putative Bcer98_0780 17 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 152976660 Pathogen - hypothetical protein Bcer98_2951 1 None None None 152976258 Common - RNA-binding S4 domain protein Bcer98_2546 31 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 152977301 Common - transcriptional regulator, MarR family Bcer98_3624 40 COG1846 MarR, Transcriptional regulators Transcription 152974267 Pathogen - conserved hypothetical cytosolic protein Bcer98_0434 1 None None None 152975713 Pathogen - hypothetical protein Bcer98_1953 1 None None None 152977348 Common - ribonuclease R Bcer98_3673 209 COG0557 VacB, Exoribonuclease R Transcription 152975902 Common - hypothetical protein Bcer98_2170 3 COG4495 COG4495, Uncharacterized protein conserved in bacteria Function unknown 152974370 Common - polar amino acid ABC transporter, inner membrane subunit Bcer98_0543 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 152976322 Common - hypothetical protein Bcer98_2610 3 None None None 152976549 Pathogen - hypothetical protein Bcer98_2838 1 None None None 152976557 Common - protein of unknown function DUF939 Bcer98_2846 9 COG4129 COG4129, Predicted membrane protein Function unknown 152976735 Common - PhoH family protein Bcer98_3031 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 152975802 Common - pyrrolidone-carboxylate peptidase Bcer98_2056 55 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 152975369 Pathogen - hypothetical protein Bcer98_1580 1 None None None 152974438 Common - ABC transporter-related protein Bcer98_0613 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 152976247 Common - carbamoyl-phosphate synthase, large subunit Bcer98_2535 239 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 152974773 Common - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Bcer98_0964 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 152976275 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase Bcer98_2563 211 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 152976085 Common - FMN-binding negative transcriptional regulator Bcer98_2362 58 COG2808 PaiB, Transcriptional regulator Transcription 152975900 Pathogen - hypothetical protein Bcer98_2168 1 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 152976952 Common - multidrug resistance protein A Bcer98_3255 107 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 152975729 Common - transposase IS116/IS110/IS902 family protein Bcer98_1971 51 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 152976255 Common - transcriptional regulator, TraR/DksA family Bcer98_2543 2 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 152976444 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bcer98_2733 208 COG0388 COG0388, Predicted amidohydrolase General function prediction only 152974839 Common - formate/nitrite transporter Bcer98_1035 70 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 152975548 Pathogen - hypothetical protein Bcer98_1770 1 None None None 152975304 Common - peptidase S8 and S53 subtilisin kexin sedolisin Bcer98_1513 130 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 152974582 Common - aldehyde dehydrogenase Bcer98_0764 224 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152974017 Common - protein of unknown function DUF1648 Bcer98_0169 5 None None None 152976609 Common - biotin/lipoate A/B protein ligase Bcer98_2899 94 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 152975853 Common - hypothetical protein Bcer98_2112 10 None None None 152976424 Common - binding-protein-dependent transport systems inner membrane component Bcer98_2712 161 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 152975081 Common - DivIVA family protein Bcer98_1281 17 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 152977338 Common - cytochrome P450 Bcer98_3663 88 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 152976493 Common - Xanthine/uracil/vitamin C permease Bcer98_2782 135 COG2252 COG2252, Permeases General function prediction only 152975818 Common - UDP-glucose 6-dehydrogenase Bcer98_2076 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 152975527 Common - transcriptional regulator, LysR family Bcer98_1749 159 COG0583 LysR, Transcriptional regulator Transcription 152976694 Common - beta-lactamase domain protein Bcer98_2989 225 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 152975181 Common - export protein FliQ family 3 Bcer98_1382 24 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 152974215 Common - type I phosphodiesterase/nucleotide pyrophosphatase Bcer98_0380 37 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 152974607 Common - hypothetical protein Bcer98_0791 1 None None None 152975874 Common - protein of unknown function DUF161 Bcer98_2134 47 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152976691 Common - Cystathionine gamma-synthase Bcer98_2986 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 152975781 Common - uridine kinase Bcer98_2031 2 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 152976130 Common - hypothetical protein Bcer98_2414 3 None None None 152976857 Common - signal transduction histidine kinase regulating citrate/malate metabolism Bcer98_3156 3 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 152976385 Common - Transketolase central region Bcer98_2673 183 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 152975060 Common - Polynucleotide adenylyltransferase region Bcer98_1260 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 152976715 Common - protein of unknown function DUF161 Bcer98_3010 75 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152976976 Common - protein of unknown function DUF441 Bcer98_3279 28 COG2707 COG2707, Predicted membrane protein Function unknown 152975312 Pathogen - hypothetical protein Bcer98_1521 1 None None None 152976505 Pathogen - hypothetical protein Bcer98_2794 1 None None None 152974323 Common - acetyl-CoA carboxylase Bcer98_0490 1 None None None 152974546 Common - peptidase M42 family protein Bcer98_0723 89 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 152974600 Common - PTS system, beta-glucoside-specific IIABC subunit Bcer98_0784 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 152976494 Common - magnesium and cobalt transport protein CorA Bcer98_2783 178 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 152973888 Common - primase/topoisomerase like protein Bcer98_0035 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 152976345 Common - putative methyltransferase Bcer98_2633 219 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 152976991 Common - beta-lactamase domain protein Bcer98_3294 108 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 152973867 Common - deoxynucleoside kinase Bcer98_0014 40 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 152977233 Common - YoaS Bcer98_3551 10 None None None 152976380 Common - hypothetical protein Bcer98_2668 3 None None None 152973860 Common - DNA gyrase, A subunit Bcer98_0006 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 152975124 Common - hypothetical protein Bcer98_1325 3 None None None 152976680 Common - putative transcriptional regulator Bcer98_2973 15 COG2345 COG2345, Predicted transcriptional regulator Transcription 152976062 Common - phosphonate ABC transporter, inner membrane subunit Bcer98_2338 126 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 152974454 Common - transcriptional regulator, MarR family Bcer98_0629 23 COG1846 MarR, Transcriptional regulators Transcription 152977401 Common - comF operon protein 3 Bcer98_3729 154 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 152975576 Common - adenylyltransferase Bcer98_1799 10 None None None 152976323 Common - protein of unknown function DUF1064 Bcer98_2611 9 None None None 152977136 Common - Integrase catalytic region Bcer98_3448 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 152977066 Common - regulatory protein ArsR Bcer98_3373 42 COG0640 ArsR, Predicted transcriptional regulators Transcription 152975360 Common - GCN5-related N-acetyltransferase Bcer98_1571 30 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152973967 Common - ribosomal protein L24 Bcer98_0115 214 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 152975821 Pathogen - hypothetical protein Bcer98_2079 1 None None None 152975166 Common - hypothetical protein Bcer98_1367 2 None None None 152976209 Common - KH domain family Bcer98_2495 64 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 152974038 Pathogen - hypothetical protein Bcer98_0193 1 None None None 152974362 Common - NAD-dependent epimerase/dehydratase Bcer98_0534 196 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152976086 Common - putative transcriptional regulator, GntR family Bcer98_2363 172 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 152976294 Common - holin Bcer98_2582 2 None None None 152977423 Common - PTS system, lactose/cellobiose family IIC subunit Bcer98_3753 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 152976276 Common - UDP-N-acetylmuramyl-tripeptide synthetase Bcer98_2564 214 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 152975384 Pathogen - hypothetical protein Bcer98_1596 1 None None None 152976206 Common - ribosomal protein L19 Bcer98_2492 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 152974160 Common - ATPase associated with various cellular activities AAA_3 Bcer98_0320 178 COG0714 COG0714, MoxR-like ATPases General function prediction only 152976519 Common - riboflavin biosynthesis protein RibD Bcer98_2808 233 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 152974634 Common - membrane-flanked domain Bcer98_0820 36 COG3402 COG3402, Uncharacterized conserved protein Function unknown 152976143 Common - metallophosphoesterase Bcer98_2429 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 152975333 Common - thioesterase superfamily protein Bcer98_1542 138 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 152977397 Common - peptide chain release factor 2 Bcer98_3725 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 152976844 Common - quinolinate synthetase complex, A subunit Bcer98_3143 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 152974343 Common - heavy metal translocating P-type ATPase Bcer98_0512 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 152974994 Common - nucleoside recognition domain protein Bcer98_1194 39 COG2715 SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. General function prediction only 152974205 Common - protein of unknown function DUF77 Bcer98_0369 31 COG0011 COG0011, Uncharacterized conserved protein Function unknown 152976670 Common - siphovirus Gp157 family protein Bcer98_2962 15 None None None 152977220 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_3538 205 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 152977661 Common - beta-lactamase domain protein Bcer98_4002 60 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 152977257 Common - FeS assembly protein SufD Bcer98_3578 181 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 152977405 Common - degV family protein Bcer98_3733 55 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 152974553 Pathogen - hypothetical protein Bcer98_0730 1 None None None 152974557 Pathogen - hypothetical protein Bcer98_0735 1 None None None 152974849 Common - H(+)-transporting two-sector ATPase Bcer98_1045 115 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 152974011 Common - NUDIX hydrolase Bcer98_0161 5 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 152977366 Common - protein of unknown function DUF1657 Bcer98_3691 8 None None None 152977345 Pathogen - hypothetical protein Bcer98_3670 1 None None None 152977261 Common - ABC transporter-related protein Bcer98_3582 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 152975207 Pathogen - glycosyl transferase, group 2 family protein Bcer98_1408 1 None None None 152973859 Common - DNA gyrase, B subunit Bcer98_0005 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 152974122 Common - hypothetical protein Bcer98_0281 18 COG4877 COG4877, Uncharacterized protein conserved in bacteria Function unknown 152974881 Common - regulatory protein GntR HTH Bcer98_1077 132 COG1725 COG1725, Predicted transcriptional regulators Transcription 152975293 Common - polysaccharide deacetylase Bcer98_1500 98 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152975694 Common - Domain of unknown function DUF1836 Bcer98_1931 3 None None None 152974183 Common - arginine repressor, ArgR Bcer98_0347 65 COG1438 ArgR, Arginine repressor Transcription 152975864 Pathogen - hypothetical protein Bcer98_2124 1 None None None 152975886 Common - transcriptional regulator, XRE family Bcer98_2151 58 COG1476 COG1476, Predicted transcriptional regulators Transcription 152976049 Common - amino acid permease-associated region Bcer98_2325 156 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 152974530 Common - AMP-dependent synthetase and ligase Bcer98_0707 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152974622 Common - MIP family channel protein Bcer98_0806 133 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 152976027 Common - N-acetylmuramoyl-L-alanine amidase family 2 Bcer98_2303 26 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 152975280 Common - hypothetical protein Bcer98_1486 1 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976093 Common - ThiJ/PfpI domain protein Bcer98_2372 18 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 152974003 Common - glucosamine--fructose-6-phosphate aminotransferase, isomerizing Bcer98_0152 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 152976017 Common - hypothetical protein Bcer98_2290 5 None None None 152976476 Common - Sporulation stage V protein AE Bcer98_2765 15 None None None 152977515 Common - peptide chain release factor 1 Bcer98_3850 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 152976768 Common - phosphatidylserine decarboxylase Bcer98_3064 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 152977643 Common - protein kinase Bcer98_3984 90 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 152977676 Common - MscS Mechanosensitive ion channel Bcer98_4017 218 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 152974152 Common - RNA methyltransferase, TrmA family Bcer98_0311 207 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 152975027 Common - small GTP-binding protein Bcer98_1227 220 COG1160 COG1160, Predicted GTPases General function prediction only 152974629 Common - histidine triad (HIT) protein Bcer98_0814 239 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 152974842 Common - small acid-soluble spore protein alpha/beta type Bcer98_1038 13 None None None 152977572 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_3910 150 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152976409 Common - conserved hypothetical cytosolic protein Bcer98_2697 3 None None None 152975049 Common - protein of unknown function DUF1405 Bcer98_1249 16 COG4347 COG4347, Predicted membrane protein Function unknown 152975751 Common - aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein Bcer98_1999 117 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 152977375 Common - protein of unknown function DUF368 Bcer98_3700 49 COG2035 COG2035, Predicted membrane protein Function unknown 152977488 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Bcer98_3821 185 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 152976885 Common - ATP-dependent protease La Bcer98_3184 206 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 152974794 Common - hypothetical protein Bcer98_0989 3 None None None 152975888 Pathogen - hypothetical protein Bcer98_2153 1 None None None 152976560 Common - extracellular solute-binding protein family 3 Bcer98_2849 186 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 152976697 Common - protein of unknown function DUF910 Bcer98_2992 8 COG4483 COG4483, Uncharacterized protein conserved in bacteria Function unknown 152977365 Common - Sporulation stage V protein AE Bcer98_3690 15 None None None 152974534 Common - preprotein translocase, SecA subunit Bcer98_0711 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 152974471 Common - SpoVR family protein Bcer98_0646 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 152977477 Common - proton-translocating NADH-quinone oxidoreductase, chain N Bcer98_3809 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 152973910 Common - Sporulation stage II protein E Bcer98_0057 28 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 152975984 Common - thioredoxin related protein Bcer98_2257 6 None None None 152975742 Common - UvrD/REP helicase Bcer98_1990 63 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 152974924 Common - acetolactate synthase, large subunit, biosynthetic type Bcer98_1120 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 152977207 Common - Abortive infection protein Bcer98_3525 31 None None None 152975709 Pathogen - group-specific protein Bcer98_1949 1 None None None 152977608 Common - hypothetical protein Bcer98_3946 17 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 152975483 Common - phosphoesterase PA-phosphatase related Bcer98_1699 127 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 152975113 Common - protein of unknown function DUF350 Bcer98_1314 28 COG3766 COG3766, Predicted membrane protein Function unknown 152975132 Common - beta-lactamase domain protein Bcer98_1333 161 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 152974747 Common - Nucleotidyl transferase Bcer98_0937 224 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 152974223 Common - conserved hypothetical tellurium resistance protein Bcer98_0388 4 None None None 152977686 Common - ribonuclease P protein component Bcer98_4027 95 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 152976474 Common - GerA spore germination protein Bcer98_2763 15 None None None 152975989 Common - putative transcriptional regulator, XRE family Bcer98_2262 52 COG3655 COG3655, Predicted transcriptional regulator Transcription 152977033 Common - large conductance mechanosensitive channel protein Bcer98_3340 136 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 152973960 Common - ribosomal protein S19 Bcer98_0108 239 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 152974282 Common - protein of unknown function DUF402 Bcer98_0449 17 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 152975478 Pathogen - hypothetical protein Bcer98_1693 1 None None None 152974812 Common - binding-protein-dependent transport systems inner membrane component Bcer98_1008 209 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 152975289 Common - Homoserine dehydrogenase Bcer98_1496 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 152976905 Common - response regulator receiver protein Bcer98_3205 132 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 152977211 Common - UTP-glucose-1-phosphate uridylyltransferase Bcer98_3529 234 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 152976968 Common - formamidopyrimidine-DNA glycosylase Bcer98_3271 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 152976664 Common - hypothetical protein Bcer98_2955 9 None None None 152975967 Common - hypothetical protein Bcer98_2240 1 None None None 152974571 Common - helix-turn-helix domain protein Bcer98_0751 54 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 152976271 Common - UDP-N-acetylenolpyruvoylglucosamine reductase Bcer98_2559 202 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 152976463 Common - transcriptional regulator, GntR family Bcer98_2752 134 COG2188 PhnF, Transcriptional regulators Transcription 152976113 Common - protein of unknown function DUF420 Bcer98_2397 23 COG2322 COG2322, Predicted membrane protein Function unknown 152974771 Pathogen - hypothetical protein Bcer98_0962 1 None None None 152975042 Common - 3-phosphoshikimate 1-carboxyvinyltransferase Bcer98_1242 235 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 152977353 Common - Phosphopyruvate hydratase Bcer98_3678 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 152975640 Common - Citrate transporter Bcer98_1874 23 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 152976310 Common - HNH endonuclease Bcer98_2598 31 COG1403 McrA, Restriction endonuclease Defense mechanisms 152974238 Common - hypothetical protein Bcer98_0404 2 None None None 152975035 Common - Heptaprenyl diphosphate synthase subunit 1 Bcer98_1235 4 None None None 152974259 Common - Glutaminase Bcer98_0426 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 152975857 Common - hypothetical protein Bcer98_2116 4 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 152973881 Common - protein of unknown function DUF972 Bcer98_0028 17 COG4467 COG4467, Uncharacterized protein conserved in bacteria Function unknown 152974476 Common - protein of unknown function DUF871 Bcer98_0651 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 152975026 Common - hypothetical protein Bcer98_1226 4 None None None 152976827 Common - single-stranded-DNA-specific exonuclease RecJ Bcer98_3125 195 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 152976629 Common - hypothetical protein Bcer98_2920 5 None None None 152973883 Common - Excinuclease ABC C subunit domain protein Bcer98_0030 72 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 152976637 Common - type II secretion system protein E Bcer98_2928 161 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 152973984 Common - ribosomal protein L17 Bcer98_0132 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 152975871 Common - protein of unknown function DUF1470 Bcer98_2131 5 COG5516 COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding General function prediction only 152976923 Common - transcriptional regulator, TetR family Bcer98_3225 137 COG1309 AcrR, Transcriptional regulator Transcription 152974219 Common - stress protein Bcer98_0384 29 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 152975185 Common - GTP-binding signal recognition particle SRP54 G- domain Bcer98_1386 247 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 152976459 Common - Phosphotransferase system, phosphocarrier protein HPr Bcer98_2748 80 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 152975450 Common - gluconate transporter Bcer98_1664 86 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 152976935 Common - pseudouridine synthase Bcer98_3238 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 152977315 Common - Na dependent nucleoside transporter domain protein Bcer98_3640 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 152975330 Common - Mg2 transporter protein CorA family protein Bcer98_1539 79 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 152977390 Common - conserved hypothetical protein 698 Bcer98_3715 113 COG2855 COG2855, Predicted membrane protein Function unknown 152974666 Common - malate synthase A Bcer98_0853 56 COG2225 AceB, Malate synthase Energy production and conversion 152974461 Common - Thioredoxin domain Bcer98_0636 16 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 152974143 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Bcer98_0302 95 COG0546 Gph, Predicted phosphatases General function prediction only 152977494 Common - ATP synthase F1, alpha subunit Bcer98_3827 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 152975758 Common - nucleotidyltransferase Bcer98_2007 5 None None None 152973877 Common - Orn/Lys/Arg decarboxylase major region Bcer98_0024 91 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 152977079 Common - L-rhamnose-proton symporter, RhaT family, DMT superfamily Bcer98_3389 11 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 152975151 Common - flagellar hook-associated protein 3 Bcer98_1352 99 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 152974095 Common - chaperonin Cpn10 Bcer98_0251 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 152977107 Common - protein of unknown function DUF214 Bcer98_3417 20 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 152976782 Common - transcriptional regulator, XRE family Bcer98_3080 118 COG1396 HipB, Predicted transcriptional regulators Transcription 152974654 Common - beta-channel forming cytolysin Bcer98_0841 3 None None None 152974449 Common - potassium-transporting ATPase, A subunit Bcer98_0624 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 152976189 Common - undecaprenyl diphosphate synthase Bcer98_2475 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 152976245 Common - dihydroorotate dehydrogenase family protein Bcer98_2533 239 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 152975176 Common - flagellar motor switch protein, putative Bcer98_1377 5 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 152975218 Common - peptidase S51 dipeptidase E Bcer98_1420 17 COG3340 PepE, Peptidase E Amino acid transport and metabolism 152976576 Common - response regulator receiver protein Bcer98_2865 222 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 152974610 Common - metallophosphoesterase Bcer98_0794 95 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 152975774 Common - CRISPR-associated helicase Cas3 Bcer98_2024 106 COG1203 COG1203, Predicted helicases General function prediction only 152977615 Common - acriflavin resistance protein Bcer98_3953 179 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 152977317 Common - amino acid carrier protein Bcer98_3642 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 152974236 Common - SNARE associated Golgi protein Bcer98_0402 100 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 152974853 Common - ABC transporter-related protein Bcer98_1049 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 152974024 Common - tRNA synthetase class II (G H P and S) Bcer98_0176 16 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 152974617 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0801 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974952 Common - cobalamin (vitamin B12) biosynthesis CbiX protein Bcer98_1149 81 COG2138 COG2138, Uncharacterized conserved protein Function unknown 152976720 Common - hydroxymethylbutenyl pyrophosphate reductase Bcer98_3015 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 152976134 Common - DNA mismatch repair protein MutL Bcer98_2420 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 152977561 Common - 4-oxalocrotonate tautomerase family enzyme Bcer98_3899 35 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 152977458 Common - phosphoglycerate transporter Bcer98_3790 137 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152974165 Pathogen - hypothetical protein Bcer98_0325 1 None None None 152974042 Common - pyrroline-5-carboxylate reductase Bcer98_0197 214 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 152974442 Common - glycine oxidase ThiO Bcer98_0617 162 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 152975790 Common - GCN5-related N-acetyltransferase Bcer98_2040 19 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 152974843 Common - MaoC domain protein dehydratase Bcer98_1039 100 COG2030 MaoC, Acyl dehydratase Lipid metabolism 152976001 Pathogen - hypothetical protein Bcer98_2274 2 None None None 152976268 Common - cell division protein FtsA Bcer98_2556 190 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 152973917 Common - Anthranilate synthase Bcer98_0064 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 152975724 Pathogen - hypothetical protein Bcer98_1966 1 None None None 152976333 Pathogen - hypothetical protein Bcer98_2621 1 None None None 152976745 Common - GrpE protein Bcer98_3041 232 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 152974803 Common - peptidase S26B, signal peptidase Bcer98_0999 21 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 152974488 Pathogen - hypothetical protein Bcer98_0663 1 None None None 152977508 Common - hypothetical protein Bcer98_3843 79 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 152976654 Common - phage putative head morphogenesis protein, SPP1 gp7 family Bcer98_2945 8 COG5585 COG5585, NAD+--asparagine ADP-ribosyltransferase Signal transduction mechanisms 152974123 Common - band 7 protein Bcer98_0282 35 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 152975898 Common - bacteriocin-associated integral membrane protein Bcer98_2166 6 COG4652 COG4652, Uncharacterized protein conserved in bacteria Function unknown 152974644 Common - hypothetical protein Bcer98_0830 4 None None None 152976620 Pathogen - hypothetical protein Bcer98_2911 1 None None None 152976658 Pathogen - phage transcriptional regulator, ArpU family Bcer98_2949 1 None None None 152976102 Pathogen - hypothetical protein Bcer98_2386 1 None None None 152976581 Common - deoxyxylulose-5-phosphate synthase Bcer98_2870 228 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 152974175 Common - conserved hypothetical cytosolic protein Bcer98_0339 20 COG3541 COG3541, Predicted nucleotidyltransferase General function prediction only 152975672 Common - binding-protein-dependent transport systems inner membrane component Bcer98_1907 153 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 152976683 Pathogen - hypothetical protein Bcer98_2977 1 None None None 152975649 Common - protein of unknown function DUF1540 Bcer98_1883 4 None None None 152977122 Common - molybdopterin-guanine dinucleotide biosynthesis protein A Bcer98_3433 66 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 152977276 Common - hypothetical protein Bcer98_3598 2 None None None 152974672 Common - ATP-dependent nuclease subunit AddB Bcer98_0859 24 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 152975410 Common - alpha/beta hydrolase fold Bcer98_1623 154 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152976402 Pathogen - group-specific protein Bcer98_2690 1 None None None 152977051 Common - Integrase catalytic region Bcer98_3358 46 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975192 Pathogen - hypothetical protein Bcer98_1393 1 None None None 152974190 Common - alpha amylase catalytic region Bcer98_0354 165 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 152977195 Common - aminotransferase class I and II Bcer98_3512 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 152976657 Common - Terminase small subunit Bcer98_2948 21 COG3728 XtmA, Phage terminase, small subunit DNA replication, recombination, and repair 152976870 Common - RNA-directed DNA polymerase Bcer98_3169 91 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 152976640 Common - glycoside hydrolase family 25 Bcer98_2931 23 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 152976909 Common - ABC transporter-related protein Bcer98_3210 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 152974112 Common - phosphoribosylformylglycinamidine synthase, purS Bcer98_0271 109 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 152974728 Common - pseudouridine synthase, RluA family Bcer98_0916 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 152976357 Common - Cytochrome c oxidase subunit I type Bcer98_2645 164 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 152974197 Common - ABC transporter-related protein Bcer98_0361 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 152974892 Common - 2-nitropropane dioxygenase NPD Bcer98_1088 146 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 152975625 Common - major facilitator superfamily MFS_1 Bcer98_1858 101 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152977025 Pathogen - hypothetical protein Bcer98_3330 1 None None None 152976624 Common - glycine cleavage system T protein Bcer98_2915 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 152975797 Common - protein of unknown function DUF81 Bcer98_2049 74 COG0730 COG0730, Predicted permeases General function prediction only 152975993 Common - Sporulation polysaccharide deacetylase PdaB Bcer98_2266 112 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152977414 Common - transposase Bcer98_3743 51 None None None 152977581 Common - uracil-DNA glycosylase Bcer98_3919 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 152975141 Common - response regulator receiver protein Bcer98_1342 223 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 152974708 Pathogen - hypothetical protein Bcer98_0895 1 None None None 152977292 Pathogen - hypothetical protein Bcer98_3615 1 None None None 152973937 Common - cysteinyl-tRNA synthetase Bcer98_0084 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152974113 Common - phosphoribosylformylglycinamidine synthase I Bcer98_0272 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 152973941 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcer98_0088 72 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 152976630 Pathogen - hypothetical protein Bcer98_2921 1 None None None 152976736 Common - putative stage IV sporulation YqfD Bcer98_3032 15 None None None 152976531 Common - Na+/H+ antiporter NhaC Bcer98_2820 52 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 152976778 Common - aromatic amino acid hydroxylase Bcer98_3076 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 152976757 Common - competence protein ComEA helix-hairpin-helix repeat protein Bcer98_3053 134 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 152976103 Common - Sporulation stage V protein K Bcer98_2387 59 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 152975387 Common - peptidase M4 thermolysin Bcer98_1599 46 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 152975775 Common - CRISPR-associated protein Cas5 family Bcer98_2025 6 COG1688 COG1688, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 152974606 Pathogen - hypothetical protein Bcer98_0790 1 None None None 152975598 Common - short-chain dehydrogenase/reductase SDR Bcer98_1826 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152975761 Common - phosphotransferase system lactose/cellobiose-specific IIB subunit Bcer98_2010 30 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 152976383 Common - dihydrolipoamide dehydrogenase Bcer98_2671 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 152976591 Common - Sporulation stage III protein AG Bcer98_2881 15 None None None 152976890 Pathogen - hypothetical protein Bcer98_3189 1 None None None 152977316 Common - Na dependent nucleoside transporter domain protein Bcer98_3641 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 152975521 Common - ABC transporter-related protein Bcer98_1742 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152977545 Common - conserved hypothetical protein 1655 Bcer98_3881 4 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 152975903 Pathogen - hypothetical protein Bcer98_2171 1 None None None 152974462 Common - Disulphide bond formation protein DsbB Bcer98_0637 21 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 152974721 Common - oligoendopeptidase F Bcer98_0909 88 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 152977449 Pathogen - hypothetical protein Bcer98_3781 1 None None None 152975279 Common - cobalamin synthesis protein P47K Bcer98_1485 128 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 152974487 Pathogen - hypothetical protein Bcer98_0662 1 None None None 152976808 Common - helicase, RecD/TraA family Bcer98_3106 138 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 152975089 Common - hypothetical protein Bcer98_1289 2 None None None 152974529 Common - Coproporphyrinogen dehydrogenase Bcer98_0706 213 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 152974820 Common - SCP-like extracellular Bcer98_1016 81 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 152976397 Common - putative signal transduction protein with CBS domains Bcer98_2685 14 COG2524 COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains Transcription 152974240 Common - hypothetical protein Bcer98_0406 3 None None None 152974352 Pathogen - hypothetical protein Bcer98_0521 1 None None None 152974528 Common - LPXTG-motif cell wall anchor domain Bcer98_0705 4 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 152975154 Pathogen - hypothetical protein Bcer98_1355 1 None None None 152974216 Common - hypothetical protein Bcer98_0381 1 None None None 152974377 Common - UspA domain protein Bcer98_0550 76 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 152975805 Common - urea amidolyase related protein Bcer98_2061 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 152975571 Common - phosphoglycerate mutase 1 family Bcer98_1794 159 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 152974754 Common - GCN5-related N-acetyltransferase Bcer98_0944 74 COG2153 ElaA, Predicted acyltransferase General function prediction only 152975474 Common - conserved hypothetical cytosolic protein Bcer98_1689 1 None None None 152975879 Common - putative transcriptional regulator, MerR family Bcer98_2139 33 COG0789 SoxR, Predicted transcriptional regulators Transcription 152977580 Common - conserved hypothetical membrane spanning protein Bcer98_3918 18 None None None 152974360 Common - amino acid/peptide transporter Bcer98_0531 80 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 152974673 Common - Recombination helicase AddA Bcer98_0860 227 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 152974067 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit Bcer98_0223 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 152975920 Common - hypothetical protein Bcer98_2192 2 None None None 152976608 Pathogen - hypothetical protein Bcer98_2898 1 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 152977279 Pathogen - hypothetical protein Bcer98_3602 1 None None None 152973951 Common - ribosomal protein S12 Bcer98_0099 244 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 152974701 Common - NAD-dependent epimerase/dehydratase Bcer98_0888 1 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152976897 Common - MMPL domain protein Bcer98_3196 73 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 152974350 Common - copper ion binding protein Bcer98_0519 83 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 152976256 Common - isoleucyl-tRNA synthetase Bcer98_2544 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152975003 Common - peptidase M23B Bcer98_1203 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152975710 Common - putative transcriptional regulator, AsnC family Bcer98_1950 153 COG1522 Lrp, Transcriptional regulators Transcription 152974059 Common - ABC transporter-related protein Bcer98_0215 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975809 Common - CutC family protein Bcer98_2065 59 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 152977118 Common - Helix-turn-helix type 11 domain protein Bcer98_3428 102 COG2378 COG2378, Predicted transcriptional regulator Transcription 152975497 Common - Lysine exporter protein (LYSE/YGGA) Bcer98_1716 39 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 152976285 Common - ribosomal protein L32 Bcer98_2573 34 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 152976230 Common - radical SAM enzyme, Cfr family Bcer98_2516 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 152976803 Common - alanyl-tRNA synthetase Bcer98_3101 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152974081 Common - lipoprotein, putative Bcer98_0237 7 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 152977046 Common - t-RNA-binding domain protein Bcer98_3353 207 COG0073 ARC1, EMAP domain General function prediction only 152975269 Common - YuaC Bcer98_1475 13 COG1510 COG1510, Predicted transcriptional regulators Transcription 152975966 Pathogen - hypothetical protein Bcer98_2239 1 None None None 152974335 Common - formate dehydrogenase family accessory protein FdhD Bcer98_0504 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 152974711 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit Bcer98_0899 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 152974776 Common - 3,4-dihydroxyphenylacetate 2,3-dioxygenase Bcer98_0967 40 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152977205 Common - Citrate transporter Bcer98_3522 154 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 152974022 Pathogen - hypothetical protein Bcer98_0174 1 None None None 152974137 Common - YiaAB two helix domain protein Bcer98_0296 4 COG4682 COG4682, Predicted membrane protein Function unknown 152974863 Common - integral membrane sensor signal transduction histidine kinase Bcer98_1059 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152977352 Common - LrgA family protein Bcer98_3677 15 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 152975084 Common - hypothetical protein Bcer98_1284 3 None None None 152977128 Common - ATP synthase, I subunit Bcer98_3439 4 None None None 152977302 Pathogen - hypothetical protein Bcer98_3625 1 None None None 152976875 Common - valyl-tRNA synthetase Bcer98_3174 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976421 Pathogen - hypothetical protein Bcer98_2709 1 None None None 152975256 Common - extracellular solute-binding protein family 5 Bcer98_1461 205 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152977639 Pathogen - hypothetical protein Bcer98_3980 1 None None None 152977148 Common - hypothetical protein Bcer98_3460 3 None None None 152975164 Common - flagellar hook capping protein Bcer98_1365 6 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 152976171 Common - peptidase M16 domain protein Bcer98_2457 190 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 152973899 Common - Aminoacyl-tRNA hydrolase Bcer98_0046 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 152975901 Common - integrase Bcer98_2169 6 None None None 152976178 Common - protein of unknown function DUF503 Bcer98_2464 38 COG1550 COG1550, Uncharacterized protein conserved in bacteria Function unknown 152976425 Common - binding-protein-dependent transport systems inner membrane component Bcer98_2713 175 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 152976595 Common - Stage III sporulation AC family protein Bcer98_2885 15 None None None 152976565 Common - dehydrogenase complex catalytic domain Bcer98_2854 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 152975756 Common - hypothetical protein Bcer98_2005 9 None None None 152976510 Common - 5'-Nucleotidase domain protein Bcer98_2799 140 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 152977115 Common - ABC transporter, permease Bcer98_3425 3 None None None 152976548 Common - ribonuclease Z Bcer98_2837 133 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 152976580 Common - hemolysin A Bcer98_2869 132 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 152976183 Common - protein of unknown function DUF150 Bcer98_2469 159 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 152976246 Common - oxidoreductase FAD/NAD(P)-binding domain protein Bcer98_2534 86 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 152977566 Common - transport system permease protein Bcer98_3904 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 152977229 Common - protein of unknown function DUF1450 Bcer98_3547 4 COG4844 COG4844, Uncharacterized protein conserved in bacteria Function unknown 152974418 Common - amino acid permease-associated region Bcer98_0592 164 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 152976582 Common - Polyprenyl synthetase Bcer98_2871 240 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 152977542 Common - arginyl-tRNA synthetase Bcer98_3878 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152975951 Common - short-chain dehydrogenase/reductase SDR Bcer98_2223 228 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152975044 Common - Protein of unknown function UPF0302 Bcer98_1244 8 COG5582 COG5582, Uncharacterized conserved protein Function unknown 152977662 Common - hypothetical protein Bcer98_4003 7 COG4853 COG4853, Uncharacterized protein conserved in bacteria Function unknown 152975351 Pathogen - hypothetical protein Bcer98_1562 1 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 152975208 Common - putative glycosyl hydrolase Bcer98_1409 32 None None None 152975830 Pathogen - ATP synthase subunit A Bcer98_2088 1 None None None 152975564 Pathogen - hypothetical protein Bcer98_1787 1 None None None 152974720 Common - Competence CoiA family protein Bcer98_0908 12 COG4469 CoiA, Competence protein General function prediction only 152974907 Pathogen - hypothetical protein Bcer98_1103 1 None None None 152975425 Common - beta-lactamase Bcer98_1638 135 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152977435 Common - sulfatase Bcer98_3766 69 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 152976920 Common - Electron transfer flavoprotein alpha subunit Bcer98_3222 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 152977650 Common - DNA adenine methylase Bcer98_3991 105 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 152975560 Common - metal dependent phosphohydrolase Bcer98_1783 208 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 152977444 Common - zinc finger SWIM domain protein Bcer98_3776 3 COG4715 COG4715, Uncharacterized conserved protein Function unknown 152973905 Common - RNA-binding S4 domain protein Bcer98_0052 61 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 152974832 Common - glycerophosphoryl diester phosphodiesterase Bcer98_1028 78 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 152977534 Common - helix-turn-helix domain protein Bcer98_3869 9 None None None 152977655 Pathogen - hypothetical protein Bcer98_3996 1 None None None 152975372 Pathogen - hypothetical protein Bcer98_1584 1 None None None 152974887 Pathogen - hypothetical protein Bcer98_1083 1 None None None 152975175 Common - Lytic transglycosylase catalytic Bcer98_1376 172 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 152977171 Common - protein of unknown function DUF214 Bcer98_3485 17 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 152975631 Common - hypothetical protein Bcer98_1865 9 COG1483 COG1483, Predicted ATPase (AAA+ superfamily) General function prediction only 152974151 Common - Na dependent nucleoside transporter domain protein Bcer98_0310 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 152975913 Common - GCN5-related N-acetyltransferase Bcer98_2184 9 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 152975685 Common - TPR repeat-containing protein Bcer98_1922 2 None None None 152973925 Common - lysyl-tRNA synthetase Bcer98_0072 248 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 152974070 Pathogen - hypothetical protein Bcer98_0226 1 None None None 152976360 Common - cytochrome oxidase assembly Bcer98_2648 63 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 152974734 Pathogen - hypothetical protein Bcer98_0922 1 None None None 152977677 Common - protein of unknown function DUF1256 Bcer98_4018 14 None None None 152977587 Common - O-acetylhomoserine/O-acetylserine sulfhydrylase Bcer98_3925 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 152976228 Common - protein kinase Bcer98_2514 159 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 152977098 Common - GerA spore germination protein Bcer98_3408 15 COG3247 HdeD, Uncharacterized conserved protein Function unknown 152977332 Pathogen - hypothetical protein Bcer98_3657 1 None None None 152976306 Common - phage prohead protease, HK97 family Bcer98_2594 25 COG3740 COG3740, Phage head maturation protease General function prediction only 152977016 Common - Septation ring formation regulator EzrA Bcer98_3321 56 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 152974004 Pathogen - hypothetical protein Bcer98_0153 1 None None None 152974079 Common - Rhomboid family protein Bcer98_0235 122 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 152974825 Common - two component transcriptional regulator, winged helix family Bcer98_1021 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152974594 Common - CDP-glucose 4,6-dehydratase Bcer98_0777 230 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152975361 Common - protein of unknown function DUF909 Bcer98_1572 8 COG4842 COG4842, Uncharacterized protein conserved in bacteria Function unknown 152975929 Common - oligoendopeptidase F Bcer98_2201 87 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 152976390 Common - protein of unknown function DUF1447 Bcer98_2678 11 COG5503 COG5503, Uncharacterized conserved small protein Function unknown 152975243 Common - dihydroxy-acid dehydratase Bcer98_1446 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 152977156 Common - lipoprotein, putative Bcer98_3468 2 None None None 152977430 Common - cytochrome d ubiquinol oxidase subunit II Bcer98_3761 7 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 152974797 Common - Tetratricopeptide domain protein Bcer98_0992 3 None None None 152974018 Common - major facilitator superfamily MFS_1 Bcer98_0170 30 None None None 152974470 Pathogen - hypothetical protein Bcer98_0645 1 None None None 152974590 Common - lipolytic protein G-D-S-L family Bcer98_0772 34 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 152974959 Common - hypothetical protein Bcer98_1156 3 None None None 152974930 Common - 3-isopropylmalate dehydratase, small subunit Bcer98_1126 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 152975612 Common - ThiJ/PfpI domain protein Bcer98_1842 34 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 152975184 Common - type III secretion FHIPEP protein Bcer98_1385 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 152974914 Common - putative undecaprenol kinase Bcer98_1110 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 152973974 Common - ribosomal protein L30 Bcer98_0122 152 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 152976822 Pathogen - hypothetical protein Bcer98_3120 1 None None None 152976445 Common - aminotransferase class I and II Bcer98_2734 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 152974939 Pathogen - hypothetical protein Bcer98_1136 1 None None None 152975404 Common - hypothetical protein Bcer98_1617 4 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 152975051 Common - Sporulation protein YpjB Bcer98_1251 2 None None None 152974264 Common - formate acetyltransferase Bcer98_0431 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 152975745 Pathogen - conserved hypothetical proetin Bcer98_1993 1 None None None 152974767 Common - protein of unknown function DUF181 Bcer98_0958 46 COG1944 COG1944, Uncharacterized conserved protein Function unknown 152974802 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_0998 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152976108 Pathogen - hypothetical protein Bcer98_2392 1 None None None 152974477 Common - protein of unknown function DUF214 Bcer98_0652 176 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 152973911 Common - tRNA(Ile)-lysidine synthetase Bcer98_0058 227 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 152974252 Pathogen - putative conjugative transposon protein Bcer98_0419 5 None None None 152975193 Common - transcriptional regulator, TetR family Bcer98_1394 73 COG1309 AcrR, Transcriptional regulator Transcription 152976234 Common - primosomal protein N' Bcer98_2520 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 152975398 Pathogen - hypothetical protein Bcer98_1611 1 None None None 152977288 Pathogen - hypothetical protein Bcer98_3611 1 None None None 152974981 Pathogen - hypothetical protein Bcer98_1181 1 None None None 152976412 Common - diguanylate cyclase Bcer98_2700 18 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 152975342 Common - branched-chain amino acid transport system II carrier protein Bcer98_1551 51 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 152974412 Pathogen - hypothetical protein Bcer98_0586 1 None None None 152974159 Common - protein of unknown function DUF58 Bcer98_0319 7 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 152975090 Common - hypothetical protein Bcer98_1290 3 None None None 152973940 Common - protein of unknown function DUF901 Bcer98_0087 29 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 152975653 Common - Domain of unknown function DUF1835 Bcer98_1887 8 None None None 152974899 Common - flavodoxin Bcer98_1095 96 COG0716 FldA, Flavodoxins Energy production and conversion 152974295 Common - hypothetical protein Bcer98_0462 2 None None None 152975616 Common - spore germination protein Bcer98_1847 1 None None None 152976771 Common - ribosomal protein L33 Bcer98_3067 92 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 152973996 Common - Sporulation polysaccharide deacetylase PdaB Bcer98_0144 112 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152975737 Pathogen - hypothetical protein Bcer98_1984 1 None None None 152975229 Pathogen - hypothetical protein Bcer98_1432 1 None None None 152975959 Common - squalene/oxidosqualene cyclase Bcer98_2232 40 COG1657 SqhC, Squalene cyclase Lipid metabolism 152976371 Pathogen - hypothetical protein Bcer98_2659 1 None None None 152975123 Common - ribonuclease H Bcer98_1324 8 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 152975766 Common - hypothetical protein Bcer98_2015 14 None None None 152975303 Common - MMPL domain protein Bcer98_1512 52 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 152973968 Common - ribosomal protein L5 Bcer98_0116 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 152974523 Common - hypothetical protein Bcer98_0700 7 None None None 152975708 Pathogen - transposase Bcer98_1947 1 None None None 152974086 Common - protein of unknown function DUF335 SprT Bcer98_0242 12 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 152976034 Common - imidazolonepropionase Bcer98_2310 109 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 152977024 Common - hypothetical protein Bcer98_3329 5 None None None 152975513 Pathogen - group-specific protein Bcer98_1733 1 None None None 152975332 Common - Protein of unknown function DUF1980 Bcer98_1541 8 COG3689 COG3689, Predicted membrane protein Function unknown 152976378 Common - hypothetical protein Bcer98_2666 2 None None None 152977210 Common - BioY protein Bcer98_3528 62 COG1268 BioY, Uncharacterized conserved protein General function prediction only 152977552 Common - penicillin-binding protein, 1A family Bcer98_3888 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 152974039 Common - transcriptional regulator, TetR family Bcer98_0194 41 COG1309 AcrR, Transcriptional regulator Transcription 152975973 Common - DNA topoisomerase IV, A subunit Bcer98_2246 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 152974588 Common - 3-hydroxyacyl-CoA dehydrogenase NAD-binding Bcer98_0770 157 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 152976078 Common - transposase, IS256 family Bcer98_2354 6 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974209 Common - glycoside hydrolase family 18 Bcer98_0373 53 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 152975013 Common - Negative regulator of genetic competence Bcer98_1213 10 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 152976618 Common - ABC transporter-related protein Bcer98_2909 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152976523 Pathogen - group-specific protein Bcer98_2812 1 None None None 152977523 Common - hypothetical protein Bcer98_3858 3 None None None 152975824 Common - glycosyl transferase group 1 Bcer98_2082 206 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 152976124 Common - transport system permease protein Bcer98_2408 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 152976069 Common - hypothetical protein Bcer98_2345 10 None None None 152975239 Common - Fibronectin-binding family protein Bcer98_1442 7 None None None 152975073 Common - recombination protein U Bcer98_1273 17 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 152975264 Common - deoxyribose-phosphate aldolase Bcer98_1469 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 152977268 Common - putative PAP2 family protein Bcer98_3589 25 None None None 152974311 Common - Threonyl/alanyl tRNA synthetase SAD Bcer98_0478 201 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 152975127 Pathogen - hypothetical protein Bcer98_1328 1 None None None 152976153 Common - peptidase M16 domain protein Bcer98_2439 110 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 152974211 Pathogen - hypothetical protein Bcer98_0375 1 None None None 152974425 Common - spore germination B3 GerAC family protein Bcer98_0599 14 None None None 152974785 Common - DNA topoisomerase I Bcer98_0977 46 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 152975661 Common - Sporulation lipoprotein YhcN/YlaJ Bcer98_1895 7 None None None 152975535 Common - Isochorismatase Bcer98_1757 83 COG1535 EntB, Isochorismate hydrolase Secondary metabolites biosynthesis, transport, and catabolism 152976054 Common - hypothetical protein Bcer98_2330 2 None None None 152976330 Pathogen - hypothetical protein Bcer98_2618 1 None None None 152974096 Common - chaperonin GroEL Bcer98_0252 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 152974253 Common - Resolvase domain Bcer98_0420 43 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152974746 Common - putative streptomycin biosynthesis StrF domain protein Bcer98_0936 4 None None None 152975893 Pathogen - hypothetical protein Bcer98_2161 1 None None None 152976172 Common - Sporulation protein polysaccharide deacetylase YlxY Bcer98_2458 111 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152977342 Common - Alpha/beta hydrolase fold-3 domain protein Bcer98_3667 130 COG0657 Aes, Esterase/lipase Lipid metabolism 152973991 Common - hypothetical protein Bcer98_0139 2 None None None 152975228 Common - S-layer domain protein Bcer98_1431 29 COG4193 LytD, Beta- N-acetylglucosaminidase Carbohydrate transport and metabolism 152975215 Pathogen - hypothetical protein Bcer98_1416 1 None None None 152977244 Common - protein of unknown function DUF1027 Bcer98_3562 11 COG4470 COG4470, Uncharacterized protein conserved in bacteria Function unknown 152974220 Common - stress protein Bcer98_0385 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 152975133 Common - protein of unknown function DUF421 Bcer98_1334 37 COG2323 COG2323, Predicted membrane protein Function unknown 152976356 Common - cytochrome c oxidase subunit III Bcer98_2644 157 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 152973858 Common - DNA replication and repair protein RecF Bcer98_0004 170 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 152974856 Common - 2-aminoethylphosphonate--pyruvate transaminase Bcer98_1052 166 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 152975556 Common - hypothetical protein Bcer98_1779 14 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 152977656 Pathogen - hypothetical protein Bcer98_3997 1 None None None 152974435 Pathogen - hypothetical protein Bcer98_0609 1 None None None 152976344 Common - pantetheine-phosphate adenylyltransferase Bcer98_2632 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 152975704 Common - ABC transporter-related protein Bcer98_1943 11 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 152975759 Common - polysaccharide deacetylase Bcer98_2008 96 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152976181 Common - protein of unknown function DUF448 Bcer98_2467 44 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 152976366 Common - pyridoxamine 5'-phosphate oxidase-related FMN-binding Bcer98_2654 1 None None None 152974882 Common - ABC transporter-related protein Bcer98_1078 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975933 Common - Glycerophosphodiester phosphodiesterase Bcer98_2205 156 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 152975836 Common - hypothetical protein Bcer98_2095 3 None None None 152975028 Common - Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Bcer98_1228 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 152976220 Common - transcriptional regulator, DeoR family Bcer98_2506 17 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 152975693 Pathogen - hypothetical protein Bcer98_1930 1 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 152976714 Common - ABC transporter-related protein Bcer98_3009 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 152975454 Common - Azobenzene reductase Bcer98_1668 83 COG0431 COG0431, Predicted flavoprotein General function prediction only 152976313 Pathogen - hypothetical protein Bcer98_2601 1 None None None 152974931 Common - ATP phosphoribosyltransferase Bcer98_1128 209 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 152976912 Common - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Bcer98_3213 50 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152976812 Common - transcriptional regulator, BadM/Rrf2 family Bcer98_3110 171 COG1959 COG1959, Predicted transcriptional regulator Transcription 152974266 Common - Monogalactosyldiacylglycerol synthase Bcer98_0433 43 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 152976021 Pathogen - hypothetical protein Bcer98_2296 2 None None None 152975529 Common - 4-oxalocrotonate tautomerase Bcer98_1751 29 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 152977206 Common - glycyl-tRNA synthetase Bcer98_3524 89 COG0423 GRS1, Glycyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 152974002 Common - phosphoglucosamine mutase Bcer98_0150 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 152974925 Common - acetolactate synthase, small subunit Bcer98_1121 193 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 152975648 Common - cysteine dioxygenase type I Bcer98_1882 17 COG5553 COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily General function prediction only 152973900 Common - hypothetical protein Bcer98_0047 3 None None None 152976368 Common - hypothetical protein Bcer98_2656 2 None None None 152975667 Common - tryptophan 23-dioxygenase Bcer98_1901 42 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 152975294 Common - lipoprotein, putative Bcer98_1501 3 COG5022 COG5022, Myosin heavy chain Cytoskeleton 152974513 Common - ABC transporter-related protein Bcer98_0689 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 152976164 Common - hypothetical protein Bcer98_2450 5 None None None 152974166 Common - hypothetical protein Bcer98_0326 2 None None None 152976698 Common - 5-formyltetrahydrofolate cyclo-ligase Bcer98_2993 62 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 152974670 Common - SNARE associated Golgi protein Bcer98_0857 68 COG0398 COG0398, Uncharacterized conserved protein Function unknown 152975965 Pathogen - hypothetical protein Bcer98_2238 1 None None None 152977123 Common - molybdenum cofactor synthesis domain Bcer98_3434 190 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 152974736 Common - hypothetical protein Bcer98_0924 1 None None None 152975313 Pathogen - hypothetical protein Bcer98_1522 1 None None None 152977402 Common - helicase domain protein Bcer98_3730 143 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 152976307 Common - phage portal protein, HK97 family Bcer98_2595 65 COG4695 COG4695, Phage-related protein Function unknown 152976986 Common - conserved hypothetical membrane spanning protein Bcer98_3289 6 None None None 152976112 Common - transcriptional regulator, DeoR family Bcer98_2396 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 152974795 Pathogen - hypothetical protein Bcer98_0990 1 COG5185 HEC1, Protein involved in chromosome segregation, interacts with SMC proteins Cell division and chromosome partitioning 152975281 Pathogen - conserved hypothetical multidrug-efflux transporter Bcer98_1487 1 COG2510 COG2510, Predicted membrane protein Function unknown 152976044 Common - transcriptional regulator, LysR family Bcer98_2320 193 COG0583 LysR, Transcriptional regulator Transcription 152975825 Common - Spore coat protein CotS Bcer98_2083 6 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 152977687 Common - ribosomal protein L34 Bcer98_4028 191 None None None 152974699 Pathogen - hypothetical protein Bcer98_0886 1 None None None 152975484 Common - cation diffusion facilitator family transporter Bcer98_1700 210 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 152977537 Common - ABC-2 type transporter Bcer98_3873 29 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 152977260 Common - binding-protein-dependent transport systems inner membrane component Bcer98_3581 100 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 152977052 Common - Glutamyl aminopeptidase Bcer98_3359 88 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 152977137 Common - N-acetylmuramoyl-L-alanine amidase family 2 Bcer98_3449 22 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152974100 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0256 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 152974559 Pathogen - hypothetical protein Bcer98_0737 1 None None None 152976954 Common - Cellulase Bcer98_3257 88 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 152974558 Pathogen - hypothetical protein Bcer98_0736 2 None None None 152976272 Common - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Bcer98_2560 210 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 152976318 Pathogen - hypothetical protein Bcer98_2606 1 None None None 152976547 Common - putative regulatory protein Bcer98_2836 8 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 152975939 Common - hypothetical protein Bcer98_2211 3 None None None 152977065 Common - drug resistance transporter, EmrB/QacA subfamily Bcer98_3372 218 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152975949 Common - putative cold-shock DNA-binding domain protein Bcer98_2221 183 COG1278 CspC, Cold shock proteins Transcription 152976977 Common - Sporulation integral membrane protein YtvI Bcer98_3280 169 COG0628 PerM, Predicted permease General function prediction only 152976491 Common - transcriptional regulator, MarR family Bcer98_2780 85 COG1846 MarR, Transcriptional regulators Transcription 152974109 Common - phosphoribosylaminoimidazole carboxylase, ATPase subunit Bcer98_0268 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 152976623 Common - Glycine dehydrogenase (decarboxylating) Bcer98_2914 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 152973972 Common - ribosomal protein L18 Bcer98_0120 219 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 152975842 Common - hypothetical protein Bcer98_2101 3 None None None 152976260 Common - protein of unknown function DUF552 Bcer98_2548 53 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 152975041 Common - histidinol-phosphate aminotransferase Bcer98_1241 239 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 152973861 Common - IG hypothetical 16768 Bcer98_0007 3 None None None 152976398 Common - hypothetical protein Bcer98_2686 2 None None None 152977280 Pathogen - hypothetical protein Bcer98_3603 1 None None None 152975971 Common - sodium:dicarboxylate symporter Bcer98_2244 162 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 152977406 Common - protein of unknown function UPF0029 Bcer98_3734 136 COG1739 COG1739, Uncharacterized conserved protein Function unknown 152976018 Pathogen - replication protein Bcer98_2291 1 None None None 152976610 Common - Rhodanese domain protein Bcer98_2900 171 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 152974826 Common - integral membrane sensor signal transduction histidine kinase Bcer98_1022 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152976506 Common - aldo/keto reductase Bcer98_2795 206 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 152976503 Common - GCN5-related N-acetyltransferase Bcer98_2792 58 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152976797 Common - peptidase U32 Bcer98_3095 138 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 152977521 Common - fructose-1,6-bisphosphate aldolase, class II Bcer98_3856 179 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 152976320 Pathogen - hypothetical protein Bcer98_2608 1 None None None 152974633 Common - glyoxalase family protein Bcer98_0819 6 None None None 152976819 Common - UBA/THIF-type NAD/FAD binding protein Bcer98_3117 222 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 152976372 Common - Inositol-phosphate phosphatase Bcer98_2660 188 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 152976689 Common - homocysteine S-methyltransferase Bcer98_2984 178 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 152976858 Common - ribosomal protein L27 Bcer98_3157 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 152974184 Common - arginine deiminase Bcer98_0348 59 COG2235 ArcA, Arginine deiminase Amino acid transport and metabolism 152974995 Common - nucleoside recognition domain protein Bcer98_1195 39 COG0700 SpmB, Uncharacterized membrane protein Function unknown 152976477 Common - Stage V sporulation AD family protein Bcer98_2766 15 None None None 152977254 Common - FeS assembly protein SufB Bcer98_3575 187 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 152975062 Common - 3-methyl-2-oxobutanoate hydroxymethyltransferase Bcer98_1262 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 152974204 Common - amino acid adenylation domain Bcer98_0368 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152974585 Common - Na+ symporter Bcer98_0767 128 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 152977614 Common - transcriptional regulator, TetR family Bcer98_3952 82 COG1309 AcrR, Transcriptional regulator Transcription 152973994 Common - spore germination protein Bcer98_0142 4 None None None 152974388 Common - RbsD or FucU transport Bcer98_0561 50 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 152974554 Common - hypothetical protein Bcer98_0731 4 COG3402 COG3402, Uncharacterized conserved protein Function unknown 152974033 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0187 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152976430 Common - short-chain dehydrogenase/reductase SDR Bcer98_2718 51 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152974729 Common - Hep_Hag repeat-containing protein Bcer98_0917 7 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 152974161 Common - hypothetical protein Bcer98_0321 8 None None None 152975767 Common - integral membrane protein Bcer98_2016 3 None None None 152974361 Common - pyridoxal phosphate-dependent acyltransferase, putative Bcer98_0533 190 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 152974417 Common - quinol oxidase AA3, subunit II Bcer98_0591 153 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 152977367 Common - protein of unknown function DUF421 Bcer98_3692 68 COG2323 COG2323, Predicted membrane protein Function unknown 152976267 Common - cell division protein FtsZ Bcer98_2555 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 152976446 Common - Ribulose-bisphosphate carboxylase Bcer98_2735 65 COG1850 RbcL, Ribulose 1,5-bisphosphate carboxylase, large subunit Carbohydrate transport and metabolism 152977221 Common - Thioredoxin-disulfide reductase Bcer98_3539 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 152977034 Pathogen - putative transcriptional regulator Bcer98_3341 1 None None None 152974043 Common - sugar transport family protein Bcer98_0198 11 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 152976744 Common - chaperone protein DnaK Bcer98_3040 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 152977507 Common - DoxX family protein Bcer98_3842 36 COG2259 COG2259, Predicted membrane protein Function unknown 152975492 Common - Monogalactosyldiacylglycerol synthase Bcer98_1711 23 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 152976868 Common - cell shape determining protein, MreB/Mrl family Bcer98_3167 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 152974066 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit Bcer98_0222 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 152976823 Common - hypothetical protein Bcer98_3121 45 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152976655 Common - phage portal protein, SPP1 family Bcer98_2946 10 None None None 152975144 Pathogen - hypothetical protein Bcer98_1345 1 None None None 152975580 Common - Carbamoyl-phosphate synthase L chain ATP-binding Bcer98_1803 238 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 152976002 Pathogen - hypothetical protein Bcer98_2275 1 None None None 152976682 Common - sodium:dicarboxylate symporter Bcer98_2975 156 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 152976843 Common - Spore coat assembly protein SafA Bcer98_3142 12 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152977514 Common - modification methylase, HemK family Bcer98_3849 227 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 152974643 Common - Endonuclease/exonuclease/phosphatase Bcer98_0829 50 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 152977178 Common - isochorismate synthase Bcer98_3494 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152975385 Common - Glutathione peroxidase Bcer98_1597 115 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 152976076 Pathogen - hypothetical protein Bcer98_2352 1 None None None 152974680 Common - putative stage 0 sporulation regulatory protein Bcer98_0867 1 None None None 152976908 Common - sodium export permease protein Bcer98_3209 41 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 152974283 Common - ABC transporter-related protein Bcer98_0450 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152975572 Common - hypothetical protein Bcer98_1795 1 None None None 152973957 Common - ribosomal protein L4/L1e Bcer98_0105 224 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 152973898 Common - ribose-phosphate pyrophosphokinase Bcer98_0045 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 152975095 Common - hypothetical protein Bcer98_1295 3 None None None 152976594 Common - Sporulation stage III protein AD Bcer98_2884 15 None None None 152973983 Common - DNA-directed RNA polymerase, alpha subunit Bcer98_0131 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 152974176 Common - major facilitator superfamily MFS_1 Bcer98_0340 134 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152975449 Common - gluconate kinase Bcer98_1663 184 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 152974230 Pathogen - hypothetical protein Bcer98_0396 1 None None None 152975165 Common - protein of unknown function DUF1078 domain protein Bcer98_1366 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 152974642 Common - GCN5-related N-acetyltransferase Bcer98_0828 31 COG0456 RimI, Acetyltransferases General function prediction only 152977295 Common - histidine kinase Bcer98_3618 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974709 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0897 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152975152 Common - flagellar hook-associated 2 domain protein Bcer98_1353 81 COG1345 FliD, Flagellar capping protein Cell motility and secretion 152975626 Pathogen - hypothetical protein Bcer98_1859 1 None None None 152977176 Common - alpha/beta hydrolase fold Bcer98_3492 195 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152977602 Common - putative transmembrane anti-sigma factor Bcer98_3940 3 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 152975299 Pathogen - Protein of unknown function DUF1963 Bcer98_1508 1 COG3878 COG3878, Uncharacterized protein conserved in bacteria Function unknown 152973936 Common - serine O-acetyltransferase Bcer98_0083 215 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 152977026 Pathogen - hypothetical protein Bcer98_3331 1 None None None 152975416 Common - Citrate transporter Bcer98_1629 38 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 152974111 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase Bcer98_0270 215 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 152976962 Common - replication initiation and membrane attachment family protein Bcer98_3265 16 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 152975796 Common - hypothetical protein Bcer98_2048 12 None None None 152976934 Common - branched-chain amino acid transport system II carrier protein Bcer98_3237 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 152977194 Common - RNA binding S1 domain protein Bcer98_3511 239 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 152975501 Common - glycoside hydrolase family 25 Bcer98_1721 18 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 152973979 Common - translation initiation factor IF-1 Bcer98_0127 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 152974943 Pathogen - hypothetical protein Bcer98_1140 1 None None None 152974498 Pathogen - Fibronectin type III domain protein Bcer98_0674 1 None None None 152977189 Common - MgtC/SapB transporter Bcer98_3506 111 COG1285 SapB, Uncharacterized membrane protein Function unknown 152976941 Common - ribonuclease HIII Bcer98_3244 38 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 152975477 Common - hypothetical protein Bcer98_1692 2 None None None 152975575 Common - GCN5-related N-acetyltransferase Bcer98_1798 56 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152975036 Common - 2-heptaprenyl-14-naphthoquinone methyltransferase Bcer98_1236 224 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 152973893 Common - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Bcer98_0040 196 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 152977624 Common - Superoxide dismutase Bcer98_3962 206 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 152974239 Common - calcium/proton antiporter, CaCA family Bcer98_0405 29 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 152974237 Common - protein of unknown function DUF6 transmembrane Bcer98_0403 50 COG2510 COG2510, Predicted membrane protein Function unknown 152976904 Common - glutamate racemase Bcer98_3204 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 152977569 Common - biotin/lipoate A/B protein ligase Bcer98_3907 17 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 152977263 Common - thioredoxin Bcer98_3584 10 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 152975126 Common - putative cold-shock DNA-binding domain protein Bcer98_1327 181 COG1278 CspC, Cold shock proteins Transcription 152973880 Common - PSP1 domain protein Bcer98_0027 58 COG1774 COG1774, Uncharacterized homolog of PSP1 Function unknown 152976417 Common - competence protein J Bcer98_2705 1 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 152977092 Common - respiratory nitrate reductase, gamma subunit Bcer98_3402 64 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 152974770 Common - 2-oxoglutarate dehydrogenase, E1 subunit Bcer98_0961 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 152976948 Common - small, acid-soluble spore protein I Bcer98_3251 4 None None None 152975191 Common - branched-chain amino acid transport Bcer98_1392 12 COG4392 COG4392, Predicted membrane protein Function unknown 152975609 Common - transcriptional regulator, AbrB family Bcer98_1839 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 152977660 Common - 2-alkenal reductase Bcer98_4001 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 152976921 Common - Electron transfer flavoprotein alpha/beta-subunit Bcer98_3223 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 152975109 Common - Rhodanese domain protein Bcer98_1310 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 152976886 Common - Sporulation protease LonB Bcer98_3185 235 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 152977381 Common - HPr kinase Bcer98_3706 60 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 152975680 Common - hypothetical protein Bcer98_1917 4 None None None 152975025 Common - hypothetical protein Bcer98_1225 9 None None None 152974844 Pathogen - polyhydroxyalkanoic acid inclusion protein PhaP Bcer98_1040 1 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 152975012 Common - putative transcriptional regulator, MerR family Bcer98_1212 33 COG0789 SoxR, Predicted transcriptional regulators Transcription 152974572 Common - DNA-cytosine methyltransferase Bcer98_0752 118 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 152975820 Common - glycosyl transferase group 1 Bcer98_2078 190 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 152977080 Common - major facilitator superfamily MFS_1 Bcer98_3390 98 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 152973882 Common - hypothetical protein Bcer98_0029 85 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 152977495 Common - ATP synthase F1, delta subunit Bcer98_3828 190 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 152974619 Common - cell envelope-related transcriptional attenuator Bcer98_0803 64 COG1316 LytR, Transcriptional regulator Transcription 152974667 Common - isocitrate lyase Bcer98_0854 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 152974716 Common - arsenate reductase and related Bcer98_0904 48 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 152974479 Common - efflux transporter, RND family, MFP subunit Bcer98_0654 163 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 152975159 Common - flagellar motor switch protein FliG Bcer98_1360 120 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 152977642 Common - hypothetical protein Bcer98_3983 3 None None None 152976861 Common - ribonuclease, Rne/Rng family Bcer98_3160 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 152976721 Common - protein of unknown function DUF34 Bcer98_3016 104 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 152975777 Common - CRISPR-associated CXXC_CXXC protein Cst1 Bcer98_2027 5 None None None 152975116 Common - transcriptional regulator, HxlR family Bcer98_1317 146 COG1733 COG1733, Predicted transcriptional regulators Transcription 152976828 Common - cation diffusion facilitator family transporter Bcer98_3126 218 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 152976829 Common - protein-export membrane protein SecD Bcer98_3127 218 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 152977463 Common - EPSX protein Bcer98_3795 2 None None None 152975473 Common - lysine 2,3-aminomutase YodO family protein Bcer98_1688 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 152976219 Common - fatty acid/phospholipid synthesis protein PlsX Bcer98_2505 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 152977460 Common - hypothetical protein Bcer98_3792 2 None None None 152974753 Common - UvrD/REP helicase Bcer98_0943 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 152976458 Common - phosphoenolpyruvate-protein phosphotransferase Bcer98_2747 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 152973891 Common - protein of unknown function DUF1021 Bcer98_0038 18 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 152976859 Common - protein of unknown function DUF464 Bcer98_3158 22 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 152977106 Common - major facilitator superfamily MFS_1 Bcer98_3416 87 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976990 Common - DRTGG domain protein Bcer98_3293 123 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 152976410 Common - lipoprotein, putative Bcer98_2698 4 None None None 152976577 Common - Peptidase S55 sporulation stage IV protein B Bcer98_2866 19 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 152975393 Pathogen - hypothetical protein Bcer98_1606 1 None None None 152975439 Common - asparagine synthase (glutamine-hydrolyzing) Bcer98_1652 167 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 152977045 Common - hypothetical protein Bcer98_3352 4 None None None 152975444 Common - nitroreductase Bcer98_1657 98 COG0778 NfnB, Nitroreductase Energy production and conversion 152973876 Common - CsfB protein, putative Bcer98_0023 1 None None None 152974027 Common - transposase (10) Bcer98_0180 2 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 152975498 Common - Protein of unknown function YqcI/YcgG Bcer98_1717 12 COG3403 COG3403, Uncharacterized conserved protein Function unknown 152974612 Common - metal dependent phosphohydrolase Bcer98_0796 47 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 152974657 Common - two component transcriptional regulator, winged helix family Bcer98_0844 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152975423 Common - hypothetical protein Bcer98_1636 3 None None None 152975217 Common - MATE efflux family protein Bcer98_1419 183 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 152977422 Common - phosphotransferase system PTS lactose/cellobiose-specific IIA subunit Bcer98_3752 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 152975255 Common - amidohydrolase Bcer98_1460 177 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 152976195 Common - heat shock protein HslVU, ATPase subunit HslU Bcer98_2481 211 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 152977382 Common - membrane protein of unknown function Bcer98_3707 8 COG1950 COG1950, Predicted membrane protein Function unknown 152977314 Common - transcriptional antiterminator, BglG Bcer98_3639 20 COG3711 BglG, Transcriptional antiterminator Transcription 152974319 Common - Microbial collagenase Bcer98_0486 38 COG3291 COG3291, FOG: PKD repeat General function prediction only 152975563 Common - toxic anion resistance family protein Bcer98_1786 36 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 152976848 Common - 3H domain protein Bcer98_3147 16 COG1827 COG1827, Predicted small molecule binding protein (contains 3H domain) General function prediction only 152977294 Common - two component transcriptional regulator, winged helix family Bcer98_3617 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152977476 Common - hypothetical protein Bcer98_3808 7 COG4836 COG4836, Predicted membrane protein Function unknown 152976940 Common - protein of unknown function DUF710 Bcer98_3243 13 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 152974837 Common - hypothetical protein Bcer98_1033 120 None None None 152976284 Common - Transcription factor RsfA Bcer98_2572 3 None None None 152974577 Common - type III restriction protein res subunit Bcer98_0759 160 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 152976033 Common - formiminoglutamase Bcer98_2309 156 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 152976426 Common - extracellular solute-binding protein family 1 Bcer98_2714 105 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 152974522 Common - hypothetical protein Bcer98_0699 7 None None None 152976370 Common - GTP-binding protein TypA Bcer98_2658 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 152976422 Common - aminotransferase class I and II Bcer98_2710 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 152977638 Common - Rep-related protein Bcer98_3979 9 None None None 152975183 Common - type III secretion exporter Bcer98_1384 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 152977149 Common - quorum-sensing autoinducer 2 (AI-2), LuxS Bcer98_3461 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 152974958 Common - Na+ antiporter NhaC Bcer98_1155 56 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 152975163 Common - hypothetical protein Bcer98_1364 3 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 152976761 Common - metal dependent phosphohydrolase Bcer98_3057 43 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 152975136 Pathogen - hypothetical protein Bcer98_1337 1 None None None 152977057 Common - aminoglycoside phosphotransferase Bcer98_3364 14 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 152976737 Common - protein of unknown function DUF1429 Bcer98_3033 15 None None None 152974951 Common - uroporphyrin-III C-methyltransferase Bcer98_1148 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 152977129 Pathogen - hypothetical protein Bcer98_3440 1 None None None 152975424 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_1637 5 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152975043 Common - Tetratricopeptide TPR_2 repeat protein Bcer98_1243 106 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 152975757 Common - GCN5-related N-acetyltransferase Bcer98_2006 61 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 152976898 Common - hypothetical protein Bcer98_3197 27 None None None 152976182 Common - NusA antitermination factor Bcer98_2468 221 COG0195 NusA, Transcription elongation factor Transcription 152976511 Pathogen - transcriptional regulator, CopG family Bcer98_2800 1 None None None 152974989 Common - protein of unknown function DUF470 Bcer98_1189 82 COG2898 COG2898, Uncharacterized conserved protein Function unknown 152974181 Common - ABC transporter-related protein Bcer98_0345 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 152974561 Common - hypothetical protein Bcer98_0740 3 None None None 152975950 Common - conserved repeat domain Bcer98_2222 80 None None None 152974908 Pathogen - hypothetical protein Bcer98_1104 1 None None None 152975350 Common - band 7 protein Bcer98_1560 219 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 152975641 Common - hypothetical protein Bcer98_1875 2 None None None 152974089 Common - ribosomal-protein-alanine acetyltransferase Bcer98_0245 207 COG0456 RimI, Acetyltransferases General function prediction only 152976159 Common - cell divisionFtsK/SpoIIIE Bcer98_2445 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 152976713 Common - ABC-3 protein Bcer98_3008 188 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 152974138 Common - glutamyl-tRNA(Gln) amidotransferase, C subunit Bcer98_0297 153 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 152977522 Common - response regulator receiver protein Bcer98_3857 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 152974560 Common - Resolvase domain Bcer98_0738 45 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152977579 Common - Cof-like hydrolase Bcer98_3917 136 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152976583 Common - exodeoxyribonuclease VII, small subunit Bcer98_2872 129 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 152974568 Common - TPR repeat-containing protein Bcer98_0747 3 None None None 152975074 Common - hypothetical protein Bcer98_1274 3 None None None 152975373 Pathogen - hypothetical protein Bcer98_1585 1 None None None 152977543 Common - Domain of unknown function DUF1934 Bcer98_3879 10 COG4506 COG4506, Uncharacterized protein conserved in bacteria Function unknown 152974312 Common - amidohydrolase Bcer98_0479 83 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 152975686 Common - hypothetical protein Bcer98_1923 3 None None None 152974891 Common - peptidase U61 LD-carboxypeptidase A Bcer98_1087 86 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 152975209 Pathogen - hypothetical protein Bcer98_1410 1 None None None 152975037 Common - Heptaprenyl diphosphate synthase component II Bcer98_1237 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 152975359 Common - binding-protein-dependent transport systems inner membrane component Bcer98_1570 27 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152974426 Common - Ferrous iron transport B domain protein Bcer98_0600 151 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 152974591 Pathogen - phage replication protein Bcer98_0773 1 None None None 152977603 Common - transposase Bcer98_3941 5 None None None 152974595 Common - glucose-1-phosphate cytidylyltransferase Bcer98_0778 158 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 152974265 Common - pyruvate formate-lyase activating enzyme Bcer98_0432 123 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 152976400 Common - Protein of unknown function DUF1797 Bcer98_2688 4 COG4703 COG4703, Uncharacterized protein conserved in bacteria Function unknown 152976692 Common - regulatory protein ArsR Bcer98_2987 106 COG4189 COG4189, Predicted transcriptional regulator Transcription 152975335 Common - Coat F domain protein Bcer98_1544 2 None None None 152976100 Common - small GTP-binding protein Bcer98_2384 219 COG2262 HflX, GTPases General function prediction only 152976722 Common - protein of unknown function DUF633 Bcer98_3017 30 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 152974379 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0552 221 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152975522 Common - hypothetical protein Bcer98_1743 8 None None None 152976559 Common - polar amino acid ABC transporter, inner membrane subunit Bcer98_2848 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 152977441 Common - choline/carnitine/betaine transporter Bcer98_3772 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 152974605 Common - hypothetical protein Bcer98_0789 1 None None None 152974320 Common - hypothetical protein Bcer98_0487 4 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 152976087 Pathogen - putative transcriptional regulator, GntR family Bcer98_2364 1 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 152977168 Common - ABC transporter-related protein Bcer98_3481 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152977333 Common - spore germination B3 GerAC family protein Bcer98_3658 15 None None None 152976779 Common - transcriptional coactivator/pterin dehydratase Bcer98_3077 86 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 152975557 Common - GCN5-related N-acetyltransferase Bcer98_1780 11 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 152975096 Pathogen - hypothetical protein Bcer98_1296 1 None None None 152974405 Common - sortase family protein Bcer98_0578 20 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 152976530 Pathogen - hypothetical protein Bcer98_2819 1 None None None 152976212 Common - putative helix-turn-helix protein YlxM/p13 family protein Bcer98_2498 22 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 152976464 Common - glucosamine-6-phosphate isomerase Bcer98_2753 92 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 152974463 Common - cell envelope-related transcriptional attenuator Bcer98_0638 62 COG1316 LytR, Transcriptional regulator Transcription 152976590 Common - stage III sporulation protein AH Bcer98_2880 3 None None None 152974351 Common - hypothetical protein Bcer98_0520 4 None None None 152976158 Common - transcriptional regulator, GntR family Bcer98_2444 133 COG2188 PhnF, Transcriptional regulators Transcription 152977247 Common - hypothetical protein Bcer98_3565 10 COG4377 COG4377, Predicted membrane protein Function unknown 152974866 Common - hypothetical protein Bcer98_1062 3 None None None 152975274 Common - aldehyde dehydrogenase Bcer98_1480 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152974019 Pathogen - hypothetical protein Bcer98_0171 1 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 152976963 Common - ATP-cone domain protein Bcer98_3266 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 152977278 Common - Proline dehydrogenase Bcer98_3600 139 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 152977513 Common - Sporulation stage II protein R Bcer98_3848 15 None None None 152975876 Common - hypothetical protein Bcer98_2136 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 152975996 Pathogen - putative spore coat protein M Bcer98_2269 1 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 152976249 Common - dihydroorotase, multifunctional complex type Bcer98_2537 214 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 152977506 Common - PTS system, glucose subfamily, IIA subunit Bcer98_3841 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 152977480 Common - NADH-ubiquinone oxidoreductase chain 4L Bcer98_3812 114 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 152974273 Common - small acid-soluble spore K family protein Bcer98_0440 2 None None None 152975808 Common - signal peptidase I Bcer98_2064 198 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 152977002 Common - hypothetical protein Bcer98_3307 2 None None None 152974499 Common - transposase IS4 family protein Bcer98_0675 13 None None None 152974217 Common - prolyl-tRNA synthetase Bcer98_0382 245 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152975343 Common - protein of unknown function DUF1572 Bcer98_1552 8 None None None 152974031 Pathogen - hypothetical protein Bcer98_0185 2 None None None 152975652 Pathogen - hypothetical protein Bcer98_1886 1 None None None 152977230 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_3548 201 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 152974254 Common - tRNA pseudouridine synthase A Bcer98_0421 236 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 152975415 Common - iron-containing alcohol dehydrogenase Bcer98_1628 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 152974368 Common - extracellular solute-binding protein family 3 Bcer98_0541 171 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 152976099 Common - Aluminium resistance family protein Bcer98_2383 39 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 152975921 Common - hypothetical protein Bcer98_2193 2 None None None 152973952 Common - ribosomal protein S7 Bcer98_0100 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 152974322 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0489 161 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152975461 Common - hybrid cluster protein Bcer98_1676 75 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 152976253 Common - pseudouridine synthase, RluA family Bcer98_2541 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 152974274 Common - hypothetical protein Bcer98_0441 2 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 152974801 Common - hypothetical protein Bcer98_0996 2 None None None 152977594 Common - Integrase catalytic region Bcer98_3932 128 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974124 Common - hypothetical protein Bcer98_0283 2 None None None 152975711 Common - degV family protein Bcer98_1951 57 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 152973993 Common - ATP-binding protein; Mrp protein Bcer98_0141 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 152976055 Common - hypothetical protein Bcer98_2331 5 None None None 152974294 Common - HNH endonuclease Bcer98_0461 6 None None None 152976068 Common - SOS-response transcriptional repressor, LexA Bcer98_2344 174 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 152975302 Common - protein of unknown function DUF214 Bcer98_1511 17 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 152975854 Common - hypothetical protein Bcer98_2113 21 COG4720 COG4720, Predicted membrane protein Function unknown 152974766 Common - hypothetical protein Bcer98_0957 34 None None None 152974208 Common - ABC transporter-related protein Bcer98_0372 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 152976092 Common - transposase IS204/IS1001/IS1096/IS1165 family protein Bcer98_2371 14 None None None 152974980 Common - penicillin-binding protein, 1A family Bcer98_1180 206 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 152975707 Common - Integrase catalytic region Bcer98_1946 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 152977411 Pathogen - hypothetical protein Bcer98_3739 1 None None None 152975666 Common - beta-lactamase Bcer98_1900 71 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152974411 Common - GCN5-related N-acetyltransferase Bcer98_0585 16 None None None 152975958 Pathogen - hypothetical protein Bcer98_2231 1 None None None 152975736 Pathogen - hypothetical protein Bcer98_1983 1 None None None 152974087 Common - protein of unknown function UPF0079 Bcer98_0243 208 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 152975970 Common - extracellular solute-binding protein family 5 Bcer98_2243 197 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152975804 Common - LamB/YcsF family protein Bcer98_2060 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 152976772 Common - RelA/SpoT domain protein Bcer98_3068 122 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 152977271 Common - Coat F domain protein Bcer98_3592 5 None None None 152977555 Common - peptidase S8 and S53 subtilisin kexin sedolisin Bcer98_3892 126 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 152976705 Common - phosphate binding protein Bcer98_3000 146 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 152976769 Common - RNA polymerase, sigma 28 subunit, FliA/WhiG family Bcer98_3065 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 152974010 Common - Orn/DAP/Arg decarboxylase 2 Bcer98_0160 204 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 152977303 Common - Ferritin Dps family protein Bcer98_3626 147 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 152975261 Pathogen - haemolytic enterotoxin Bcer98_1466 2 None None None 152974395 Common - Sphingomyelin phosphodiesterase Bcer98_0568 9 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 152976179 Common - translation initiation factor IF-2 Bcer98_2465 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 152977645 Common - hypothetical protein Bcer98_3986 1 None None None 152976672 Pathogen - hypothetical protein Bcer98_2964 1 None None None 152976077 Pathogen - hypothetical protein Bcer98_2353 1 None None None 152976151 Common - short-chain dehydrogenase/reductase SDR Bcer98_2437 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152976553 Common - GCN5-related N-acetyltransferase Bcer98_2842 110 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152976913 Common - thioesterase superfamily protein Bcer98_3214 50 COG0824 FcbC, Predicted thioesterase General function prediction only 152975837 Common - hypothetical protein Bcer98_2096 3 COG5444 COG5444, Uncharacterized conserved protein Function unknown 152975069 Common - primosome, DnaD subunit Bcer98_1269 20 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 152974976 Pathogen - hypothetical protein Bcer98_1176 1 None None None 152974690 Common - RNA binding S1 domain protein Bcer98_0877 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 152976152 Common - peptidase M16 domain protein Bcer98_2438 190 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 152976524 Common - biotin synthase Bcer98_2813 183 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 152975019 Pathogen - hypothetical protein Bcer98_1219 1 None None None 152975615 Common - Inosine/uridine-preferring nucleoside hydrolase Bcer98_1846 82 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 152976373 Common - hypothetical protein Bcer98_2661 3 None None None 152977009 Common - hypothetical protein Bcer98_3314 6 None None None 152975214 Common - fumarate hydratase, class II Bcer98_1415 234 COG0114 FumC, Fumarase Energy production and conversion 152977289 Common - protein of unknown function DUF161 Bcer98_3612 52 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152976125 Common - periplasmic binding protein Bcer98_2409 66 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 152976846 Common - L-aspartate oxidase Bcer98_3145 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 152974784 Common - phosphohydrolase, MutT/NUDIX family Bcer98_0976 2 None None None 152975059 Common - glycosyl transferase group 1 Bcer98_1259 232 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 152974310 Common - putative signal transduction protein Bcer98_0477 7 COG3434 COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains Signal transduction mechanisms 152976489 Common - acetoin transport permease protein Bcer98_2778 4 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 152974533 Common - hypothetical protein Bcer98_0710 5 None None None 152975545 Common - threonyl-tRNA synthetase Bcer98_1767 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976233 Common - peptide deformylase Bcer98_2519 212 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 152974420 Common - amidohydrolase Bcer98_0594 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 152976227 Common - ribosome small subunit-dependent GTPase A Bcer98_2513 163 COG1162 COG1162, Predicted GTPases General function prediction only 152974071 Pathogen - hypothetical protein Bcer98_0227 1 None None None 152974735 Pathogen - hypothetical protein Bcer98_0923 1 None None None 152973926 Common - transcriptional repressor, CtsR Bcer98_0073 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 152974402 Common - transcriptional regulator, XRE family Bcer98_0575 66 COG1476 COG1476, Predicted transcriptional regulators Transcription 152976061 Common - phosphonate ABC transporter, inner membrane subunit Bcer98_2337 108 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 152975453 Common - hypothetical protein Bcer98_1667 8 None None None 152976391 Common - beta-lactamase domain protein Bcer98_2679 160 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 152975052 Common - peptidase membrane zinc metallopeptidase putative Bcer98_1252 42 COG2738 COG2738, Predicted Zn-dependent protease General function prediction only 152975325 Pathogen - exosporium protein B Bcer98_1534 1 None None None 152974527 Common - HAD-superfamily hydrolase, subfamily IIB Bcer98_0704 121 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152976431 Common - RDD domain containing protein Bcer98_2719 2 COG1714 COG1714, Predicted membrane protein/domain Function unknown 152977584 Common - lipolytic protein G-D-S-L family Bcer98_3922 26 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 152974076 Common - D-alanine--D-alanine ligase Bcer98_0232 213 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 152977155 Common - protein of unknown function DUF218 Bcer98_3467 45 COG1434 COG1434, Uncharacterized conserved protein Function unknown 152975914 Common - acetyltransferase, GNAT family Bcer98_2185 5 None None None 152976484 Common - anti-sigma-factor antagonist Bcer98_2773 64 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 152974306 Common - Sporulation protein YhbH Bcer98_0473 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 152976293 Common - N-acetylmuramoyl-L-alanine amidase family 2 Bcer98_2581 11 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152977105 Common - leucyl-tRNA synthetase Bcer98_3415 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976641 Common - toxin secretion/phage lysis holin Bcer98_2932 14 COG4824 COG4824, Phage-related holin (Lysis protein) General function prediction only 152977015 Common - aminotransferase class V Bcer98_3320 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 152976539 Common - arginine biosynthesis bifunctional protein ArgJ Bcer98_2828 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 152976756 Common - ComE operon protein 2 Bcer98_3052 93 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 152973986 Common - ABC transporter-related protein Bcer98_0134 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 152975895 Common - Integrase catalytic region Bcer98_2163 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 152976070 Common - protein of unknown function DUF1700 Bcer98_2346 18 COG4709 COG4709, Predicted membrane protein Function unknown 152977134 Common - S-layer domain protein Bcer98_3446 19 COG1505 COG1505, Serine proteases of the peptidase family S9A Amino acid transport and metabolism 152974358 Common - regulatory protein ArsR Bcer98_0529 11 COG0640 ArsR, Predicted transcriptional regulators Transcription 152977085 Common - molybdenum cofactor biosynthesis protein C Bcer98_3395 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 152975366 Common - cell divisionFtsK/SpoIIIE Bcer98_1577 198 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 152976292 Pathogen - phage protein Bcer98_2580 1 None None None 152974501 Common - transposase Bcer98_0677 33 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 152973971 Common - ribosomal protein L6 Bcer98_0119 241 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 152976830 Common - hypothetical protein Bcer98_3128 3 None None None 152976903 Common - germination protein GerM Bcer98_3203 12 COG5401 COG5401, Spore germination protein General function prediction only 152975867 Common - conserved hypothetical membrane spanning protein Bcer98_2127 12 None None None 152975528 Common - hypothetical protein Bcer98_1750 13 None None None 152974740 Common - glycosyl transferase family 2 Bcer98_0928 140 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152974702 Common - hypothetical protein Bcer98_0889 1 None None None 152975611 Common - oligoendopeptidase, M3 family Bcer98_1841 80 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 152976837 Common - hypothetical protein Bcer98_3136 39 None None None 152976135 Common - DNA mismatch repair protein MutS Bcer98_2421 206 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 152977455 Common - efflux transporter, RND family, MFP subunit Bcer98_3787 88 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 152974058 Common - two component transcriptional regulator, LuxR family Bcer98_0214 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 152974900 Pathogen - hypothetical protein Bcer98_1096 1 None None None 152974339 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0508 156 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152974787 Common - transposase IS4 family protein Bcer98_0980 26 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 152976109 Common - 3D domain protein Bcer98_2393 22 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 152977097 Common - homoserine O-acetyltransferase Bcer98_3407 132 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 152974478 Common - ABC transporter-related protein Bcer98_0653 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152974913 Common - MATE efflux family protein Bcer98_1109 182 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 152976022 Common - MATE efflux family protein Bcer98_2297 153 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 152974514 Common - small acid-soluble spore protein alpha/beta type Bcer98_0690 13 None None None 152975744 Pathogen - conserved hypothetical proetin Bcer98_1992 1 None None None 152976361 Common - pyruvate carboxylase Bcer98_2649 240 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 152976240 Common - ATPase, P-type (transporting), HAD superfamily, subfamily IC Bcer98_2526 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 152973973 Common - ribosomal protein S5 Bcer98_0121 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 152976564 Common - cell cycle protein Bcer98_2853 206 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 152975509 Common - methylmalonate-semialdehyde dehydrogenase Bcer98_1729 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152974072 Common - 4-hydroxyphenylpyruvate dioxygenase Bcer98_0228 76 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 152976450 Pathogen - conserved hypothetical membrane spanning protein Bcer98_2739 1 None None None 152974353 Common - VanW family protein Bcer98_0522 37 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 152976438 Common - NADH dehydrogenase subunit N Bcer98_2727 2 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 152976300 Common - phage major tail protein, phi13 family Bcer98_2588 7 None None None 152977222 Common - hypothetical protein Bcer98_3540 1 None None None 152975692 Common - hypothetical protein Bcer98_1929 2 None None None 152975071 Common - hypothetical protein Bcer98_1271 2 None None None 152977213 Common - protein of unknown function DUF147 Bcer98_3531 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 152974307 Common - hypothetical protein Bcer98_0474 21 None None None 152975311 Common - Ferritin Dps family protein Bcer98_1520 149 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 152973935 Common - glutamyl-tRNA synthetase Bcer98_0082 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 152976399 Common - protein of unknown function DUF458 Bcer98_2687 14 COG1978 COG1978, Uncharacterized protein conserved in bacteria Function unknown 152977215 Common - hypothetical protein Bcer98_3533 2 COG1547 COG1547, Uncharacterized conserved protein Function unknown 152974210 Common - hypothetical protein Bcer98_0374 24 None None None 152974757 Common - protein of unknown function DUF6 transmembrane Bcer98_0947 78 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 152974786 Pathogen - hypothetical protein Bcer98_0979 2 None None None 152976236 Common - DNA-directed RNA polymerase, omega subunit Bcer98_2522 16 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 152974965 Common - 5'-Nucleotidase domain protein Bcer98_1162 137 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 152977564 Common - ABC transporter-related protein Bcer98_3902 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 152976413 Pathogen - hypothetical protein Bcer98_2701 1 None None None 152976190 Common - ribosome recycling factor Bcer98_2476 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 152976605 Common - protein of unknown function DUF1385 Bcer98_2895 31 COG3872 COG3872, Predicted metal-dependent enzyme General function prediction only 152976222 Common - Dak phosphatase Bcer98_2508 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 152975241 Common - branched-chain amino acid aminotransferase Bcer98_1444 209 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 152974231 Common - heavy metal translocating P-type ATPase Bcer98_0397 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 152974717 Common - Integral membrane protein TerC Bcer98_0905 73 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 152974503 Common - protein of unknown function DUF6 transmembrane Bcer98_0679 195 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 152974494 Common - hypothetical protein Bcer98_0669 4 None None None 152976282 Common - 2-dehydropantoate 2-reductase Bcer98_2570 73 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 152975851 Common - zinc finger SWIM domain protein Bcer98_2110 1 COG4715 COG4715, Uncharacterized conserved protein Function unknown 152977087 Common - molybdenum cofactor biosynthesis protein A Bcer98_3397 199 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 152973958 Common - Ribosomal protein L25/L23 Bcer98_0106 190 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 152976738 Common - GatB/Yqey domain protein Bcer98_3034 151 COG1610 COG1610, Uncharacterized conserved protein Function unknown 152976243 Common - orotate phosphoribosyltransferase Bcer98_2531 121 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 152975128 Common - protein of unknown function DUF485 Bcer98_1329 5 COG3162 COG3162, Predicted membrane protein Function unknown 152975739 Pathogen - hypothetical protein Bcer98_1986 1 None None None 152976291 Common - transcriptional regulator, XRE family Bcer98_2579 24 COG1476 COG1476, Predicted transcriptional regulators Transcription 152977553 Common - transposase, C-terminal region Bcer98_3889 79 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 152976447 Common - 2,3-diketo-5-methylthio-1-phosphopentane phosphatase Bcer98_2736 18 COG4359 COG4359, Uncharacterized conserved protein Function unknown 152975216 Common - hypothetical protein Bcer98_1417 18 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 152976362 Common - cell cycle protein Bcer98_2650 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 152974923 Pathogen - hypothetical protein Bcer98_1119 1 None None None 152975392 Pathogen - hypothetical protein Bcer98_1605 1 None None None 152974814 Common - extracellular solute-binding protein family 1 Bcer98_1010 143 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 152974703 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III Bcer98_0890 230 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 152974309 Common - Lysine exporter protein (LYSE/YGGA) Bcer98_0476 90 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 152977166 Common - hypoxanthine phosphoribosyltransferase Bcer98_3479 153 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 152974957 Common - protein of unknown function DUF402 Bcer98_1154 6 COG2306 COG2306, Uncharacterized conserved protein Function unknown 152974293 Common - hypothetical protein Bcer98_0460 3 None None None 152975896 Common - transposase IS3/IS911 family protein Bcer98_2164 51 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975798 Common - amino acid permease-associated region Bcer98_2051 175 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 152977018 Common - protein of unknown function DUF6 transmembrane Bcer98_3323 23 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 152976893 Common - Acyl transferase Bcer98_3192 148 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152976075 Pathogen - response regulator, putative Bcer98_2351 1 None None None 152975536 Common - amino acid adenylation domain Bcer98_1758 224 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152975195 Pathogen - group-specific protein Bcer98_1396 1 None None None 152976662 Pathogen - hypothetical protein Bcer98_2953 1 None None None 152974131 Common - isochorismatase hydrolase Bcer98_0290 119 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 152975061 Common - biotin--acetyl-CoA-carboxylase ligase Bcer98_1261 230 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 152976032 Common - sodium/proline symporter Bcer98_2308 177 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 152975187 Common - ABC transporter-related protein Bcer98_1388 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152975776 Common - CRISPR-associated autoregulator, DevR family Bcer98_2026 11 COG1857 COG1857, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 152977274 Common - acetyl-CoA acetyltransferase Bcer98_3596 184 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 152977245 Common - hypothetical protein Bcer98_3563 3 None None None 152973904 Common - MazG family protein Bcer98_0051 155 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 152973943 Common - NusG antitermination factor Bcer98_0090 215 COG0250 NusG, Transcription antiterminator Transcription 152977286 Common - amino acid permease-associated region Bcer98_3609 190 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 152975143 Common - CheC, inhibitor of MCP methylation Bcer98_1344 42 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 152975753 Common - DNA/pantothenate metabolism flavoprotein domain protein Bcer98_2001 109 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 152974032 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0186 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152974800 Common - hypothetical protein Bcer98_0995 2 None None None 152976917 Common - hypothetical protein Bcer98_3218 7 None None None 152974737 Common - spore coat protein Z Bcer98_0925 2 None None None 152977255 Common - SUF system FeS assembly protein, NifU family Bcer98_3576 168 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 152975301 Common - NAD+ synthetase Bcer98_1510 217 COG0171 NadE, NAD synthase Coenzyme metabolism 152975340 Pathogen - hypothetical protein Bcer98_1549 1 None None None 152974481 Common - manganese containing catalase Bcer98_0656 46 COG3546 COG3546, Mn-containing catalase Inorganic ion transport and metabolism 152977162 Common - ferrous iron transport protein B Bcer98_3474 157 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 152976277 Common - stage V sporulation protein D Bcer98_2565 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 152974423 Common - GerA spore germination protein Bcer98_0597 15 None None None 152977022 Common - ribosomal protein S4 Bcer98_3327 243 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 152975266 Pathogen - hypothetical protein Bcer98_1471 1 COG4873 COG4873, Uncharacterized protein conserved in bacteria Function unknown 152974250 Common - CDP-alcohol phosphatidyltransferase Bcer98_0416 49 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 152976308 Common - phage Terminase Bcer98_2596 45 COG4626 COG4626, Phage terminase-like protein, large subunit General function prediction only 152976123 Common - transport system permease protein Bcer98_2407 189 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 152975764 Common - ABC transporter-related protein Bcer98_2013 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 152977644 Pathogen - hypothetical protein Bcer98_3985 1 None None None 152974685 Common - asparagine synthase (glutamine-hydrolyzing) Bcer98_0872 150 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 152976132 Pathogen - hypothetical protein Bcer98_2417 1 COG0714 COG0714, MoxR-like ATPases General function prediction only 152975537 Common - MbtH domain protein Bcer98_1759 37 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 152976980 Common - 6-phosphofructokinase Bcer98_3283 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 152976741 Common - protein of unknown function DUF558 Bcer98_3037 201 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 152976831 Common - Sporulation stage V protein B Bcer98_3129 91 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152974243 Common - hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit Bcer98_0409 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 152975647 Common - Cof-like hydrolase Bcer98_1881 122 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152976588 Common - acetyl-CoA carboxylase, biotin carboxylase Bcer98_2877 228 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 152976064 Common - phosphonate ABC transporter, periplasmic phosphonate-binding protein Bcer98_2340 86 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 152976554 Pathogen - hypothetical protein Bcer98_2843 1 None None None 152977416 Common - glycosyl transferase family 4 Bcer98_3746 226 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 152976998 Pathogen - hypothetical protein Bcer98_3302 1 None None None 152977558 Pathogen - hypothetical protein Bcer98_3895 1 None None None 152977072 Pathogen - hypothetical protein Bcer98_3382 1 None None None 152974008 Pathogen - hypothetical protein Bcer98_0158 2 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 152975618 Common - Excinuclease ABC C subunit domain protein Bcer98_1849 6 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 152974652 Common - lipoyltransferase and lipoate-protein ligase Bcer98_0839 86 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 152975091 Common - hypothetical protein Bcer98_1291 13 COG4626 COG4626, Phage terminase-like protein, large subunit General function prediction only 152974084 Common - transcriptional modulator of MazE/toxin, MazF Bcer98_0240 55 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 152976643 Common - phage putative tail component Bcer98_2934 4 COG4722 COG4722, Phage-related protein Function unknown 152974781 Common - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit Bcer98_0972 184 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 152975287 Common - NLP/P60 protein Bcer98_1493 124 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 152974986 Common - integral membrane sensor signal transduction histidine kinase Bcer98_1186 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152975414 Common - hypothetical protein Bcer98_1627 11 None None None 152977154 Common - Excalibur domain protein Bcer98_3466 25 None None None 152975926 Common - GCN5-related N-acetyltransferase Bcer98_2198 95 COG3153 COG3153, Predicted acetyltransferase General function prediction only 152974456 Common - Xanthine/uracil/vitamin C permease Bcer98_0631 135 COG2252 COG2252, Permeases General function prediction only 152974974 Common - oxidoreductase FAD/NAD(P)-binding domain protein Bcer98_1174 141 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 152976355 Common - Cytochrome c oxidase subunit IV bacillaceae Bcer98_2643 3 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 152975873 Common - transcription activator effector binding Bcer98_2133 28 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 152974665 Common - S-layer domain protein Bcer98_0852 27 None None None 152975574 Pathogen - hypothetical protein Bcer98_1797 1 None None None 152975788 Common - hypothetical protein Bcer98_2038 1 None None None 152974905 Pathogen - hypothetical protein Bcer98_1101 1 None None None 152975957 Common - Aldehyde dehydrogenase (NAD(+)) Bcer98_2229 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152975405 Common - protein of unknown function DUF1094 Bcer98_1618 11 None None None 152977119 Common - hypothetical protein Bcer98_3429 7 None None None 152974372 Common - OsmC family protein Bcer98_0545 22 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 152977637 Common - Resolvase domain Bcer98_3978 16 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152976533 Common - lipolytic protein G-D-S-L family Bcer98_2822 14 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 152974604 Common - protein of unknown function DUF74 Bcer98_0788 105 COG0393 COG0393, Uncharacterized conserved protein Function unknown 152976042 Common - protein of unknown function DUF6 transmembrane Bcer98_2318 84 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 152975858 Common - LPXTG-motif cell wall anchor domain Bcer98_2117 9 None None None 152974276 Common - A/G-specific adenine glycosylase Bcer98_0443 212 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 152975904 Common - hypothetical protein Bcer98_2174 2 None None None 152975083 Common - phage integrase family protein Bcer98_1283 191 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152974790 Pathogen - hypothetical protein Bcer98_0983 2 None None None 152976482 Common - RNA polymerase, sigma 28 subunit, FliA/WhiG family Bcer98_2771 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 152976872 Common - maf protein Bcer98_3171 196 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 152976878 Common - glutamate-1-semialdehyde-2,1-aminomutase Bcer98_3177 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 152974325 Common - hypothetical protein Bcer98_0494 6 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 152974821 Common - protein of unknown function DUF224 cysteine-rich region domain protein Bcer98_1017 177 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 152976777 Common - hypothetical protein Bcer98_3073 2 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 152974515 Common - hypothetical protein Bcer98_0691 6 None None None 152975656 Pathogen - hypothetical protein Bcer98_1890 1 None None None 152976492 Common - protein of unknown function DUF541 Bcer98_2781 82 COG2968 COG2968, Uncharacterized conserved protein Function unknown 152975105 Common - Dynamin family protein Bcer98_1306 34 COG1160 COG1160, Predicted GTPases General function prediction only 152975378 Pathogen - hypothetical protein Bcer98_1590 1 None None None 152976139 Common - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit Bcer98_2425 109 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 152977004 Common - hypothetical protein Bcer98_3309 10 None None None 152974136 Common - anion-transporting ATPase Bcer98_0295 6 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 152976465 Common - N-acetylglucosamine-6-phosphate deacetylase Bcer98_2754 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 152974860 Common - CBS domain containing protein Bcer98_1056 9 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 152975863 Pathogen - hypothetical protein Bcer98_2123 1 None None None 152976723 Common - cytochrome c class I Bcer98_3018 5 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 152977142 Common - ABC transporter, substrate-binding protein Bcer98_3454 45 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 152977438 Common - nucleoside transporter Bcer98_3769 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 152977172 Common - ABC transporter-related protein Bcer98_3486 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152974436 Common - peptidase M23B Bcer98_0610 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152975323 Common - 4-phytase Bcer98_1532 185 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152977109 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_3419 41 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152975847 Common - major facilitator superfamily MFS_1 Bcer98_2106 229 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152975995 Common - small acid-soluble spore P family protein Bcer98_2268 2 None None None 152975220 Common - Lysine exporter protein (LYSE/YGGA) Bcer98_1423 81 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 152975731 Common - hypothetical protein Bcer98_1975 3 COG5444 COG5444, Uncharacterized conserved protein Function unknown 152975807 Common - Transcriptional regulator IclR Bcer98_2063 120 COG1414 IclR, Transcriptional regulator Transcription 152974317 Common - S-layer domain protein Bcer98_0484 25 COG5279 CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain Cell division and chromosome partitioning 152976047 Common - peptidase M20 Bcer98_2323 16 COG4187 RocB, Arginine degradation protein (predicted deacylase) Amino acid transport and metabolism 152975555 Common - Abortive infection protein Bcer98_1778 39 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 152976824 Common - D-tyrosyl-tRNA(Tyr) deacylase Bcer98_3122 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 152977389 Common - transcriptional regulator, XRE family Bcer98_3714 69 COG1476 COG1476, Predicted transcriptional regulators Transcription 152976762 Common - nicotinate (nicotinamide) nucleotide adenylyltransferase Bcer98_3058 196 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 152974013 Common - major facilitator superfamily MFS_1 Bcer98_0163 53 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152975135 Common - nitroreductase Bcer98_1336 91 COG0778 NfnB, Nitroreductase Energy production and conversion 152976809 Common - TPR repeat-containing protein Bcer98_3107 133 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 152975180 Common - Triacylglycerol lipase Bcer98_1381 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 152975258 Common - Mn2+/Fe2+ transporter, NRAMP family Bcer98_1463 103 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 152976254 Common - lipoprotein signal peptidase Bcer98_2542 134 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 152977470 Common - ABC-2 type transporter Bcer98_3802 12 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 152974586 Common - Alcohol dehydrogenase GroES domain protein Bcer98_0768 214 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 152976567 Common - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Bcer98_2856 158 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 152974390 Common - Monosaccharide-transporting ATPase Bcer98_0563 146 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 152974480 Common - branched-chain amino acid transport system II carrier protein Bcer98_0655 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 152974289 Common - protein of unknown function DUF990 Bcer98_0456 38 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 152976895 Common - major facilitator superfamily MFS_1 Bcer98_3194 62 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976232 Common - methionyl-tRNA formyltransferase Bcer98_2518 224 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 152977146 Pathogen - hypothetical protein Bcer98_3458 1 None None None 152975717 Common - hypothetical protein Bcer98_1958 1 None None None 152977593 Common - putative transposase Bcer98_3931 3 None None None 152977540 Common - peptidase M28 Bcer98_3876 77 COG2234 Iap, Predicted aminopeptidases General function prediction only 152976251 Common - uracil-xanthine permease Bcer98_2539 125 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 152977040 Pathogen - hypothetical protein Bcer98_3347 1 None None None 152976051 Common - protein of unknown function DUF81 Bcer98_2327 45 COG0730 COG0730, Predicted permeases General function prediction only 152974537 Common - Ig domain protein group 2 domain protein Bcer98_0714 22 None None None 152977334 Common - GerA spore germination protein Bcer98_3659 15 None None None 152975669 Common - kynureninase Bcer98_1903 150 COG3844 COG3844, Kynureninase Amino acid transport and metabolism 152976321 Common - hypothetical protein Bcer98_2609 12 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152974835 Common - beta-lactamase Bcer98_1031 135 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152977116 Common - aspartate racemase Bcer98_3426 72 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 152976165 Common - dihydrodipicolinate synthase Bcer98_2451 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 152976197 Common - tyrosine recombinase XerC Bcer98_2483 231 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152974945 Common - hypothetical protein Bcer98_1142 3 COG5583 COG5583, Uncharacterized small protein Function unknown 152975722 Common - hypothetical protein Bcer98_1964 3 None None None 152976789 Common - Methyltransferase type 11 Bcer98_3087 36 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 152977327 Common - export-related chaperone CsaA Bcer98_3652 173 COG0073 ARC1, EMAP domain General function prediction only 152975542 Common - hypothetical protein Bcer98_1764 4 None None None 152976730 Common - hypothetical protein Bcer98_3025 2 None None None 152977305 Common - MazG nucleotide pyrophosphohydrolase Bcer98_3628 8 COG1694 MazG, Predicted pyrophosphatase General function prediction only 152975878 Common - protein of unknown function DUF21 Bcer98_2138 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 152975814 Common - amidohydrolase Bcer98_2071 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 152976334 Pathogen - hypothetical protein Bcer98_2622 1 None None None 152975784 Common - hypothetical protein Bcer98_2034 6 None None None 152977285 Common - major facilitator family transporter Bcer98_3608 1 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976184 Common - DNA polymerase III, alpha subunit Bcer98_2470 219 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 152976535 Pathogen - hypothetical protein Bcer98_2824 1 None None None 152975749 Common - Alkanesulfonate monooxygenase Bcer98_1997 86 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 152974394 Common - Phospholipase C Bcer98_0567 5 None None None 152977363 Common - Sporulation stage V protein AC Bcer98_3688 15 None None None 152976708 Common - Superoxide dismutase Bcer98_3003 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 152974407 Common - peptide symporter family protein Bcer98_0581 3 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 152974679 Common - spore germination protein PA Bcer98_0866 2 None None None 152976636 Common - type II secretion system protein Bcer98_2927 95 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 152977536 Common - integral membrane sensor signal transduction histidine kinase Bcer98_3872 150 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 152976218 Common - malonyl CoA-acyl carrier protein transacylase Bcer98_2504 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 152977684 Common - single-stranded nucleic acid binding R3H domain protein Bcer98_4025 71 COG1847 Jag, Predicted RNA-binding protein General function prediction only 152975020 Common - cytidylate kinase Bcer98_1220 208 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 152975322 Common - hypothetical protein Bcer98_1531 2 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 152977358 Common - transcriptional regulator, DeoR family Bcer98_3683 20 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 152976574 Common - Glycerophosphodiester phosphodiesterase Bcer98_2863 174 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 152975915 Common - multidrug resistance protein, SMR family Bcer98_2186 9 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 152975447 Common - heat shock protein Hsp20 Bcer98_1660 154 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 152976642 Common - phage minor structural protein Bcer98_2933 29 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152975947 Common - hypothetical protein Bcer98_2219 1 None None None 152977667 Common - replicative DNA helicase Bcer98_4008 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 152977675 Common - protein of unknown function DUF951 Bcer98_4016 27 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 152976800 Common - protein of unknown function DUF1292 Bcer98_3098 11 COG3906 COG3906, Uncharacterized protein conserved in bacteria Function unknown 152974722 Common - hypothetical protein Bcer98_0910 13 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 152976587 Common - protein of unknown function DUF322 Bcer98_2876 30 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 152976326 Common - Protein of unknown function UPF0302 Bcer98_2614 4 COG5582 COG5582, Uncharacterized conserved protein Function unknown 152973989 Common - ribosomal protein L13 Bcer98_0137 233 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 152976883 Common - Glutamyl-tRNA reductase Bcer98_3182 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 152977610 Common - polysaccharide biosynthesis protein Bcer98_3948 96 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152974473 Common - cell envelope-related transcriptional attenuator Bcer98_0648 63 COG1316 LytR, Transcriptional regulator Transcription 152974262 Common - UDP-glucose 6-dehydrogenase Bcer98_0429 207 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 152977060 Common - dipeptidase, putative Bcer98_3367 83 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 152977489 Common - protein of unknown function DUF975 Bcer98_3822 9 COG5523 COG5523, Predicted integral membrane protein Function unknown 152976203 Common - Ribonuclease H Bcer98_2489 229 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 152976671 Common - putative transcriptional regulator, XRE family Bcer98_2963 7 COG3655 COG3655, Predicted transcriptional regulator Transcription 152976889 Common - hypothetical protein Bcer98_3188 3 None None None 152975100 Common - helicase c2 Bcer98_1300 116 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 152974799 Pathogen - hypothetical protein Bcer98_0994 1 None None None 152973885 Common - transcriptional regulator, AbrB family Bcer98_0032 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 152977392 Common - hypothetical protein Bcer98_3720 13 None None None 152976743 Common - chaperone protein DnaJ Bcer98_3039 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 152974827 Common - GntR domain protein Bcer98_1023 140 COG2186 FadR, Transcriptional regulators Transcription 152974932 Common - Histidinol dehydrogenase Bcer98_1129 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 152975608 Common - short-chain dehydrogenase/reductase SDR Bcer98_1838 236 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 152976973 Common - malate dehydrogenase, NAD-dependent Bcer98_3276 197 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 152977284 Pathogen - hypothetical protein Bcer98_3607 1 None None None 152976448 Common - class II aldolase/adducin family protein Bcer98_2737 65 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 152974502 Common - protein of unknown function DUF871 Bcer98_0678 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 152975748 Pathogen - group-specific protein Bcer98_1996 2 None None None 152976048 Common - regulatory protein IclR Bcer98_2324 118 COG1414 IclR, Transcriptional regulator Transcription 152976457 Pathogen - hypothetical protein Bcer98_2746 1 None None None 152976622 Common - Glycine dehydrogenase (decarboxylating) Bcer98_2913 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 152977456 Pathogen - hypothetical protein Bcer98_3788 1 None None None 152977496 Common - ATP synthase F0, B subunit Bcer98_3829 147 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 152974547 Common - cell wall hydrolase/autolysin Bcer98_0724 118 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152975367 Pathogen - hypothetical protein Bcer98_1578 1 None None None 152975823 Common - Spore coat protein CotS Bcer98_2081 6 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 152974009 Common - protein of unknown function DUF59 Bcer98_0159 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 152976651 Pathogen - hypothetical protein Bcer98_2942 1 None None None 152977500 Common - hypothetical protein Bcer98_3833 2 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 152975441 Pathogen - hypothetical protein Bcer98_1654 1 COG5211 SSU72, RNA polymerase II-interacting protein involved in transcription start site selection Transcription 152974415 Common - Cytochrome aa3 quinol oxidase subunit III Bcer98_0589 149 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 152976686 Pathogen - hypothetical protein Bcer98_2981 1 None None None 152976376 Common - Orn/Lys/Arg decarboxylase major region Bcer98_2664 94 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 152975395 Pathogen - hypothetical protein Bcer98_1608 1 None None None 152975432 Common - twin-arginine translocation protein, TatA/E family subunit Bcer98_1645 11 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 152976009 Common - hypothetical protein Bcer98_2282 4 None None None 152976825 Common - (p)ppGpp synthetase I, SpoT/RelA Bcer98_3123 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 152977362 Common - lipoprotein, putative Bcer98_3687 2 None None None 152976965 Common - glyceraldehyde-3-phosphate dehydrogenase, type I Bcer98_3268 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 152977399 Common - sigma 54 modulation protein/ribosomal protein S30EA Bcer98_3727 172 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 152974173 Pathogen - hypothetical protein Bcer98_0335 1 None None None 152975589 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_1813 149 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152975296 Common - GCN5-related N-acetyltransferase Bcer98_1503 48 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 152975789 Common - NAD-dependent epimerase/dehydratase Bcer98_2039 36 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152976311 Pathogen - hypothetical protein Bcer98_2599 1 None None None 152976864 Common - septum site-determining protein MinD Bcer98_3163 193 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 152975668 Common - cyclase family protein Bcer98_1902 84 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 152975975 Common - CoA-binding domain protein Bcer98_2248 132 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 152976627 Pathogen - hypothetical protein Bcer98_2918 1 None None None 152975627 Pathogen - hypothetical protein Bcer98_1860 1 None None None 152977613 Common - ABC transporter-related protein Bcer98_3951 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 152976902 Common - ribonuclease PH Bcer98_3202 206 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 152975706 Common - transposase IS3/IS911 family protein Bcer98_1945 51 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974664 Common - S-layer domain protein Bcer98_0851 23 None None None 152975872 Common - major facilitator superfamily MFS_1 Bcer98_2132 52 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152977669 Common - diguanylate cyclase and phosphoesterase Bcer98_4010 85 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 152975038 Common - Nucleoside-diphosphate kinase Bcer98_1238 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 152975358 Common - binding-protein-dependent transport systems inner membrane component Bcer98_1569 150 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152977304 Common - conserved hypothetical protein 730 Bcer98_3627 126 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 152975584 Common - Propionyl-CoA carboxylase Bcer98_1807 158 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 152974516 Common - hypothetical protein Bcer98_0692 6 None None None 152974845 Common - transcriptional regulator, PadR-like family Bcer98_1041 36 COG1695 COG1695, Predicted transcriptional regulators Transcription 152976956 Common - ribosomal protein L20 Bcer98_3259 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 152977525 Common - DNA-directed RNA polymerase delta subunit Bcer98_3860 14 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 152974898 Common - amidohydrolase Bcer98_1094 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 152977585 Common - Homoserine dehydrogenase Bcer98_3923 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 152974641 Pathogen - hypothetical protein Bcer98_0827 1 None None None 152976842 Common - hypothetical protein Bcer98_3141 2 None None None 152977351 Common - LrgB family protein Bcer98_3676 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 152976052 Pathogen - hypothetical protein Bcer98_2328 1 None None None 152974006 Common - transposase of ISBst12-like element Bcer98_0156 3 None None None 152974875 Common - hypothetical protein Bcer98_1071 2 None None None 152975663 Common - Spore cortex-lytic enzyme SleB Bcer98_1897 59 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 152974129 Common - protein of unknown function DUF81 Bcer98_0288 163 COG0730 COG0730, Predicted permeases General function prediction only 152977466 Common - cell shape determining protein, MreB/Mrl family Bcer98_3798 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 152974171 Pathogen - hypothetical protein Bcer98_0332 1 None None None 152975622 Common - protein of unknown function DUF955 Bcer98_1853 5 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 152975655 Pathogen - hypothetical protein Bcer98_1889 1 None None None 152977100 Common - spore germination B3 GerAC family protein Bcer98_3410 10 None None None 152977266 Common - arsenate reductase and related Bcer98_3587 88 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 152975675 Common - ATP-dependent Clp protease, proteolytic subunit ClpP Bcer98_1910 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 152975334 Common - phospholipase D/Transphosphatidylase Bcer98_1543 147 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 152975937 Common - hypothetical protein Bcer98_2209 2 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 152974242 Common - hypothetical protein Bcer98_0408 1 None None None 152975810 Common - Acyl-CoA dehydrogenase type 2 domain Bcer98_2066 145 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 152975883 Common - phenazine biosynthesis protein PhzF family Bcer98_2143 119 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 152976088 Pathogen - hypothetical protein Bcer98_2366 1 None None None 152977231 Common - alkylphosphonate utilization operon protein PhnA Bcer98_3549 107 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 152976790 Common - hypothetical protein Bcer98_3088 2 None None None 152977344 Pathogen - hypothetical protein Bcer98_3669 1 None None None 152977187 Common - 1,4-alpha-glucan branching enzyme Bcer98_3504 151 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 152976101 Common - protein of unknown function UPF0126 Bcer98_2385 133 COG2860 COG2860, Predicted membrane protein Function unknown 152975990 Pathogen - hypothetical protein Bcer98_2263 1 None None None 152975826 Common - uncharacterised conserved protein UCP033563 Bcer98_2084 49 COG4198 COG4198, Uncharacterized conserved protein Function unknown 152973955 Common - ribosomal protein S10 Bcer98_0103 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 152973934 Common - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Bcer98_0081 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 152975634 Common - glycosyl transferase family 2 Bcer98_1868 97 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152976316 Pathogen - hypothetical protein Bcer98_2604 1 None None None 152976814 Common - LPXTG-motif cell wall anchor domain Bcer98_3112 13 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 152977318 Common - hypothetical protein Bcer98_3643 56 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 152973965 Common - ribosomal protein S17 Bcer98_0113 231 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 152976755 Common - DNA internalization-related competence protein ComEC/Rec2 Bcer98_3051 200 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 152977347 Common - SsrA-binding protein Bcer98_3672 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 152975273 Common - helix-turn-helix- domain containing protein AraC type Bcer98_1479 58 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 152974162 Common - hypothetical protein Bcer98_0322 3 None None None 152974367 Common - ABC transporter-related protein Bcer98_0540 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 152976024 Pathogen - hypothetical protein Bcer98_2300 1 None None None 152976091 Common - tryptophanyl-tRNA synthetase Bcer98_2370 237 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976690 Common - Cystathionine gamma-synthase Bcer98_2985 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 152975496 Pathogen - hypothetical protein Bcer98_1715 1 None None None 152976403 Common - diguanylate phosphodiesterase Bcer98_2691 124 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 152974054 Common - conserved hypothetical protein 1655 Bcer98_0209 3 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 152974167 Common - transport system permease protein Bcer98_0328 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 152975629 Pathogen - hypothetical protein Bcer98_1863 1 None None None 152975455 Common - protein of unknown function DUF218 Bcer98_1670 66 COG1434 COG1434, Uncharacterized conserved protein Function unknown 152975844 Pathogen - hypothetical protein Bcer98_2103 1 None None None 152976993 Common - hypothetical protein Bcer98_3296 2 None None None 152975705 Common - membrane-embedded metalloprotease Bcer98_1944 1 None None None 152974182 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0346 166 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152974349 Common - copper-translocating P-type ATPase Bcer98_0518 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 152976950 Pathogen - hypothetical protein Bcer98_3253 1 None None None 152977035 Common - global transcriptional regulator, catabolite control protein A Bcer98_3342 131 COG1609 PurR, Transcriptional regulators Transcription 152974065 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0221 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152974578 Pathogen - IS231-related transposase Bcer98_0760 1 None None None 152977212 Common - phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I Bcer98_3530 237 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 152977290 Pathogen - hypothetical protein Bcer98_3613 1 None None None 152977518 Common - transcription termination factor Rho Bcer98_3853 207 COG1158 Rho, Transcription termination factor Transcription 152976039 Common - hypothetical protein Bcer98_2315 3 None None None 152976615 Common - small multidrug resistance protein Bcer98_2905 145 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 152976979 Common - pyruvate kinase Bcer98_3282 234 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 152974464 Common - hypothetical protein Bcer98_0639 3 None None None 152974115 Common - amidophosphoribosyltransferase Bcer98_0274 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 152974774 Common - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Bcer98_0965 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152977571 Common - Chlorite dismutase Bcer98_3909 37 COG3253 COG3253, Uncharacterized conserved protein Function unknown 152976145 Common - recA protein Bcer98_2431 221 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 152975040 Common - 3-dehydroquinate synthase Bcer98_1240 208 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 152975469 Common - 3-oxoacid CoA-transferase, B subunit Bcer98_1684 97 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 152974040 Common - ABC-2 type transporter Bcer98_0195 26 COG1511 COG1511, Predicted membrane protein Function unknown 152975817 Common - Nucleotidyl transferase Bcer98_2075 233 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 152975515 Common - nuclease SbcCD, D subunit Bcer98_1735 116 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 152974030 Common - drug resistance transporter, Bcr/CflA subfamily Bcer98_0184 223 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152974623 Common - glycerol kinase Bcer98_0807 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 152977517 Common - ribosomal protein L31 Bcer98_3852 154 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 152977378 Common - transferase with hexapeptide repeat Bcer98_3703 177 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 152977071 Common - transposase, IS204/IS1001/IS1096/IS1165 Bcer98_3381 10 None None None 152974809 Common - peptidase M6 immune inhibitor A Bcer98_1005 20 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 152977623 Common - Nitric-oxide synthase Bcer98_3961 11 COG4362 COG4362, Nitric oxide synthase, oxygenase domain Inorganic ion transport and metabolism / Amino acid transport and metabolism 152974632 Common - protein EcsC Bcer98_0817 8 None None None 152976386 Common - Pyruvate dehydrogenase (acetyl-transferring) Bcer98_2674 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 152974103 Common - bacitracin ABC transporter, permease Bcer98_0261 9 COG4200 COG4200, Uncharacterized protein conserved in bacteria Function unknown 152974653 Common - AMP-dependent synthetase and ligase Bcer98_0840 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152976525 Common - biotin biosynthesis protein BioC Bcer98_2814 149 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 152975286 Pathogen - hypothetical protein Bcer98_1492 1 None None None 152975310 Common - hypothetical protein Bcer98_1519 23 COG3949 COG3949, Uncharacterized membrane protein Function unknown 152976173 Common - Polyribonucleotide nucleotidyltransferase Bcer98_2459 239 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 152975983 Common - glycoside hydrolase family 18 Bcer98_2256 83 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 152974509 Common - ABC transporter-related protein Bcer98_0685 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152975134 Common - protein of unknown function DUF218 Bcer98_1335 66 COG1434 COG1434, Uncharacterized conserved protein Function unknown 152977200 Common - aminotransferase class I and II Bcer98_3517 229 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 152976011 Common - transposase IS3/IS911 family protein Bcer98_2284 52 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974884 Common - ABC transporter-related protein Bcer98_1080 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975894 Common - IstB-like ATP-binding protein Bcer98_2162 32 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 152977209 Common - hypothetical protein Bcer98_3527 10 None None None 152976478 Common - Sporulation stage V protein AC Bcer98_2767 15 None None None 152977197 Common - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bcer98_3514 230 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 152974189 Pathogen - hypothetical protein Bcer98_0353 1 None None None 152976516 Common - alpha/beta hydrolase Bcer98_2805 63 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 152977088 Common - putative transcriptional regulator, Crp/Fnr family Bcer98_3398 167 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 152974232 Common - protein of unknown function DUF6 transmembrane Bcer98_0398 153 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 152977135 Common - putative transposase Bcer98_3447 2 None None None 152973868 Common - deoxynucleoside kinase Bcer98_0015 40 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 152975968 Common - Methyltransferase type 11 Bcer98_2241 118 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 152974996 Common - pseudouridine synthase Bcer98_1196 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 152975111 Pathogen - group-specific protein Bcer98_1312 1 None None None 152975954 Common - Inosine/uridine-preferring nucleoside hydrolase Bcer98_2226 86 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 152974950 Pathogen - hypothetical protein Bcer98_1147 1 None None None 152975579 Common - acyl-CoA dehydrogenase domain protein Bcer98_1802 168 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 152976970 Common - multi-sensor signal transduction histidine kinase Bcer98_3273 223 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 152975039 Common - Chorismate synthase Bcer98_1239 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 152974455 Common - Patatin Bcer98_0630 56 COG4667 COG4667, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 152974838 Pathogen - aminoglycoside phosphotransferase Bcer98_1034 1 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 152974698 Common - ATPase AAA-2 domain protein Bcer98_0885 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 152975168 Common - putative CheW protein Bcer98_1369 161 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 152975684 Pathogen - hypothetical protein Bcer98_1921 1 None None None 152976499 Common - tyrosine recombinase XerD Bcer98_2788 234 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152974202 Common - anaerobic c4-dicarboxylate antiporter, Dcu family Bcer98_0366 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 152975157 Common - flagellar hook-basal body complex protein FliE, putative Bcer98_1358 6 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 152974830 Common - protein of unknown function DUF162 Bcer98_1026 62 COG1556 COG1556, Uncharacterized conserved protein Function unknown 152977058 Common - pullulanase, type I Bcer98_3365 153 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 152977531 Common - protein of unknown function DUF224 cysteine-rich region domain protein Bcer98_3866 104 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 152975489 Pathogen - hypothetical protein Bcer98_1708 1 None None None 152974094 Common - Abortive infection protein Bcer98_0250 37 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 152977653 Pathogen - hypothetical protein Bcer98_3994 2 COG2433 COG2433, Uncharacterized conserved protein Function unknown 152973897 Common - UDP-N-acetylglucosamine pyrophosphorylase Bcer98_0044 237 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 152976546 Common - L-serine dehydratase, iron-sulfur-dependent, beta subunit Bcer98_2835 169 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 152975223 Pathogen - hypothetical protein Bcer98_1426 1 None None None 152974813 Common - Ornithine carbamoyltransferase Bcer98_1009 238 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 152975944 Common - MgtC/SapB transporter Bcer98_2216 116 COG1285 SapB, Uncharacterized membrane protein Function unknown 152974330 Common - Malate dehydrogenase (oxaloacetate-decarboxylating) Bcer98_0499 189 COG0281 SfcA, Malic enzyme Energy production and conversion 152977048 Common - Thioredoxin domain Bcer98_3355 34 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 152974567 Common - transposase, IS204/IS1001/IS1096/IS1165 Bcer98_0746 11 None None None 152975462 Common - hypothetical protein Bcer98_1677 2 None None None 152974344 Common - putative nicotinate phosphoribosyltransferase Bcer98_0513 124 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 152976712 Common - ferric uptake regulator, Fur family Bcer98_3007 180 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 152976283 Common - GCN5-related N-acetyltransferase Bcer98_2571 3 None None None 152974536 Common - polysaccharide pyruvyl transferase Bcer98_0713 47 COG2327 WcaK, Uncharacterized conserved protein Function unknown 152977426 Common - sodium:dicarboxylate symporter Bcer98_3757 164 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 152973903 Common - polysaccharide biosynthesis protein Bcer98_0050 28 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152975047 Common - Cytochrome b/b6 domain Bcer98_1247 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 152974870 Common - Radical SAM domain protein Bcer98_1066 131 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 152974345 Common - helix-turn-helix domain protein Bcer98_0514 5 None None None 152976343 Common - Sporulation integral membrane protein YlbJ Bcer98_2631 16 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 152976439 Common - transcriptional regulator, PadR-like family Bcer98_2728 76 COG1695 COG1695, Predicted transcriptional regulators Transcription 152975099 Pathogen - hypothetical protein Bcer98_1299 1 None None None 152976111 Common - 1-phosphofructokinase Bcer98_2395 113 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 152976925 Common - Collagen triple helix repeat Bcer98_3227 2 None None None 152975230 Common - protein of unknown function DUF344 Bcer98_1433 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 152975865 Common - transcriptional regulator, XRE family Bcer98_2125 64 COG1476 COG1476, Predicted transcriptional regulators Transcription 152974085 Common - RNA binding S1 domain protein Bcer98_0241 180 COG2183 Tex, Transcriptional accessory protein Transcription 152975341 Common - CBS domain containing protein Bcer98_1550 8 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 152976702 Common - phosphate ABC transporter, ATPase subunit Bcer98_2997 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 152974180 Common - extracellular solute-binding protein family 3 Bcer98_0344 173 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 152975538 Common - drug resistance transporter, EmrB/QacA subfamily Bcer98_1760 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152975771 Pathogen - hypothetical protein Bcer98_2020 1 None None None 152975300 Common - transglutaminase domain protein Bcer98_1509 10 COG5279 CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain Cell division and chromosome partitioning 152973918 Common - glutamine amidotransferase of anthranilate synthase Bcer98_0065 239 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 152974655 Common - protein of unknown function DUF1700 Bcer98_0842 13 COG4709 COG4709, Predicted membrane protein Function unknown 152974144 Common - 4-aminobutyrate aminotransferase Bcer98_0303 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 152975275 Common - aminotransferase class-III Bcer98_1481 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 152976573 Common - hypothetical protein Bcer98_2862 3 None None None 152974621 Common - glycerol-3-phosphate responsive antiterminator Bcer98_0805 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 152974012 Common - hypothetical protein Bcer98_0162 24 COG0439 AccC, Biotin carboxylase Lipid metabolism 152976753 Common - ribosomal protein S20 Bcer98_3049 213 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 152977424 Common - phosphotransferase system lactose/cellobiose-specific IIB subunit Bcer98_3754 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 152973928 Common - ATP:guanido phosphotransferase Bcer98_0075 25 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 152976731 Common - GTP-binding protein Era Bcer98_3026 236 COG1159 Era, GTPase General function prediction only 152975719 Common - hypothetical protein Bcer98_1960 2 None None None 152974919 Common - potassium uptake protein, TrkH family Bcer98_1115 115 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 152975092 Pathogen - hypothetical protein Bcer98_1292 1 None None None 152975324 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_1533 19 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152974465 Common - hypothetical protein Bcer98_0640 3 None None None 152976763 Common - protein of unknown function UPF0044 Bcer98_3059 98 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 152976740 Common - RNA modification enzyme, MiaB family Bcer98_3036 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 152973944 Common - ribosomal protein L11 Bcer98_0091 248 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 152975470 Common - acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Bcer98_1685 202 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 152976981 Common - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Bcer98_3284 198 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 152976754 Common - DNA polymerase III, delta subunit Bcer98_3050 82 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 152977163 Common - FeoA family protein Bcer98_3475 5 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 152974789 Common - extracellular protein Bcer98_0982 3 None None None 152975859 Common - ybaK/ebsC protein Bcer98_2119 113 COG2606 EbsC, Uncharacterized conserved protein Function unknown 152974121 Common - transcriptional regulator, LysR family Bcer98_0280 188 COG0583 LysR, Transcriptional regulator Transcription 152974583 Common - tartrate dehydrogenase Bcer98_0765 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 152976252 Common - Uracil phosphoribosyltransferase Bcer98_2540 113 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 152974472 Pathogen - hypothetical protein Bcer98_0647 1 None None None 152976063 Common - phosphonate ABC transporter, ATPase subunit Bcer98_2339 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 152975167 Pathogen - hypothetical protein Bcer98_1368 1 None None None 152975811 Common - protein of unknown function DUF218 Bcer98_2067 62 COG1434 COG1434, Uncharacterized conserved protein Function unknown 152974301 Common - putative iron-sulfur cluster binding protein Bcer98_0468 139 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 152977287 Common - 60 kDa inner membrane insertion protein Bcer98_3610 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 152974975 Common - cyclic nucleotide-binding protein Bcer98_1175 67 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 152975158 Common - flagellar M-ring protein FliF Bcer98_1359 117 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 152975481 Pathogen - hypothetical protein Bcer98_1697 1 None None None 152975927 Common - DNA mismatch repair protein MutS domain protein Bcer98_2199 207 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 152975743 Common - beta-lactamase domain protein Bcer98_1991 44 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 152975263 Common - transcriptional regulator, DeoR family Bcer98_1468 69 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 152977293 Common - ErfK/YbiS/YcfS/YnhG family protein Bcer98_3616 54 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 152975288 Common - short-chain dehydrogenase/reductase SDR Bcer98_1494 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 152976041 Common - cytochrome c biogenesis protein transmembrane region Bcer98_2317 100 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 152975617 Common - FAD dependent oxidoreductase Bcer98_1848 159 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 152976414 Pathogen - hypothetical protein Bcer98_2702 1 None None None 152975249 Common - UBA/THIF-type NAD/FAD binding protein Bcer98_1454 162 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 152975413 Pathogen - proline iminopeptidase Bcer98_1626 1 None None None 152975072 Common - penicillin-binding protein, 1A family Bcer98_1272 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 152976663 Pathogen - hypothetical protein Bcer98_2954 1 None None None 152975799 Pathogen - transcriptional regulator, LysR family Bcer98_2052 1 None None None 152976635 Common - ComG operon protein 3 Bcer98_2926 7 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 152975064 Common - aspartate 1-decarboxylase Bcer98_1264 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 152977191 Common - Protein of unknown function YugN-like protein Bcer98_3508 3 None None None 152974073 Common - fumarylacetoacetate (FAA) hydrolase Bcer98_0229 173 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 152977017 Common - transcriptional regulator, LysR family Bcer98_3322 182 COG0583 LysR, Transcriptional regulator Transcription 152974912 Common - carbonic anhydrase Bcer98_1108 13 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 152976235 Common - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Bcer98_2521 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 152975357 Common - GCN5-related N-acetyltransferase Bcer98_1568 29 None None None 152974475 Common - major facilitator superfamily MFS_1 Bcer98_0650 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152974756 Common - putative esterase Bcer98_0946 42 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 152974906 Common - aminoglycoside phosphotransferase Bcer98_1102 8 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 152976850 Common - Prephenate dehydratase Bcer98_3149 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 152977481 Common - NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Bcer98_3813 156 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 152974410 Common - amino acid permease-associated region Bcer98_0584 172 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 152975691 Common - Alcohol dehydrogenase zinc-binding domain protein Bcer98_1928 192 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 152974078 Common - DEAD/DEAH box helicase domain protein Bcer98_0234 242 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 152974504 Common - putative transcriptional regulator, AsnC family Bcer98_0680 145 COG1522 Lrp, Transcriptional regulators Transcription 152975514 Common - hypothetical protein Bcer98_1734 3 None None None 152976451 Pathogen - hypothetical protein Bcer98_2740 1 None None None 152974396 Common - hypothetical protein Bcer98_0569 32 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 152974714 Common - extracellular solute-binding protein family 5 Bcer98_0902 197 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152974566 Common - hypothetical protein Bcer98_0745 2 None None None 152975002 Common - ATP--cobalamin adenosyltransferase Bcer98_1202 131 COG2096 COG2096, Uncharacterized conserved protein Function unknown 152976404 Common - short-chain dehydrogenase/reductase SDR Bcer98_2692 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152974308 Common - hypothetical protein Bcer98_0475 22 None None None 152976606 Common - hypothetical protein Bcer98_2896 3 None None None 152977068 Common - hypothetical protein Bcer98_3375 3 None None None 152976788 Common - Adenosylhomocysteine nucleosidase Bcer98_3086 93 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 152974258 Pathogen - hypothetical protein Bcer98_0425 1 None None None 152977214 Common - Leucyl aminopeptidase Bcer98_3532 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 152976290 Pathogen - hypothetical protein Bcer98_2578 1 None None None 152974154 Common - methyltransferase Bcer98_0313 4 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 152975801 Common - Silent information regulator protein Sir2 Bcer98_2055 151 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 152976031 Common - PAS/PAC sensor signal transduction histidine kinase Bcer98_2307 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152976281 Common - hypothetical protein Bcer98_2569 20 COG4365 COG4365, Uncharacterized protein conserved in bacteria Function unknown 152974956 Common - sodium:dicarboxylate symporter Bcer98_1153 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 152975407 Common - arginyl-tRNA synthetase Bcer98_1620 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152977095 Common - Rhodanese domain protein Bcer98_3405 106 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 152975355 Common - glycosyltransferase, MGT family Bcer98_1566 42 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 152977124 Pathogen - hypothetical protein Bcer98_3435 1 None None None 152976483 Common - putative anti-sigma regulatory factor, serine/threonine protein kinase Bcer98_2772 29 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 152975738 Pathogen - hypothetical protein Bcer98_1985 1 None None None 152974854 Common - binding-protein-dependent transport systems inner membrane component Bcer98_1050 225 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 152976992 Common - peptidase M24 Bcer98_3295 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 152974524 Common - protein of unknown function DUF916 cell surface putative Bcer98_0701 8 None None None 152976119 Common - histone family protein DNA-binding protein Bcer98_2403 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 152977387 Common - putative transcriptional regulator, MerR family Bcer98_3712 128 COG0789 SoxR, Predicted transcriptional regulators Transcription 152974218 Common - ROK family protein Bcer98_0383 120 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 152975862 Common - ABC transporter-related protein Bcer98_2122 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152977167 Common - diacylglycerol kinase catalytic region Bcer98_3480 119 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 152976332 Common - hypothetical protein Bcer98_2620 1 None None None 152974822 Common - glycolate oxidase, subunit GlcD Bcer98_1018 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 152975086 Pathogen - hypothetical protein Bcer98_1286 1 None None None 152975232 Common - ABC transporter-related protein Bcer98_1435 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 152976157 Common - basic membrane lipoprotein Bcer98_2443 107 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 152974318 Common - choline/carnitine/betaine transporter Bcer98_0485 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 152974678 Common - spore germination protein PB Bcer98_0865 2 None None None 152976534 Common - transcriptional regulator, MarR family Bcer98_2823 81 COG1846 MarR, Transcriptional regulators Transcription 152974649 Common - hypothetical protein Bcer98_0836 2 COG2378 COG2378, Predicted transcriptional regulator Transcription 152977501 Common - uracil phosphoribosyltransferase Bcer98_3834 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 152975379 Common - hypothetical protein Bcer98_1591 3 None None None 152976301 Common - hypothetical protein Bcer98_2589 3 None None None 152977326 Common - hypothetical protein Bcer98_3651 4 COG4258 COG4258, Predicted exporter General function prediction only 152974088 Common - peptidase M22 glycoprotease Bcer98_0244 199 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 152976201 Common - succinyl-CoA synthetase, alpha subunit Bcer98_2487 213 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 152975569 Common - DEAD/DEAH box helicase domain protein Bcer98_1792 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 152976711 Common - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Bcer98_3006 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 152975544 Common - Antibiotic biosynthesis monooxygenase Bcer98_1766 3 None None None 152974684 Common - hypothetical protein Bcer98_0871 2 None None None 152976278 Common - Peptidoglycan glycosyltransferase Bcer98_2566 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 152976038 Pathogen - hypothetical protein Bcer98_2314 1 None None None 152975364 Common - hypothetical protein Bcer98_1575 5 COG5417 COG5417, Uncharacterized small protein Function unknown 152975702 Pathogen - hypothetical protein Bcer98_1940 1 None None None 152974251 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcer98_0418 6 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 152976231 Common - sun protein Bcer98_2517 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 152976392 Common - TrkA-N domain protein Bcer98_2680 150 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 152974730 Common - bis(5'nucleosyl)-tetraphosphatase, ApaH Bcer98_0918 82 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 152977442 Common - 3D domain protein Bcer98_3773 24 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 152975785 Common - transcriptional regulator, PadR-like family Bcer98_2035 16 COG1695 COG1695, Predicted transcriptional regulators Transcription 152976806 Pathogen - hypothetical protein Bcer98_3104 1 None None None 152975009 Common - Abortive infection protein Bcer98_1209 27 None None None 152977524 Common - CTP synthase Bcer98_3859 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 152974934 Common - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Bcer98_1131 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 152976335 Pathogen - prophage LambdaBa02, DNA-binding protein, putative Bcer98_2623 1 None None None 152975750 Common - binding-protein-dependent transport systems inner membrane component Bcer98_1998 175 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 152977654 Common - putative transcriptional regulator, XRE family Bcer98_3995 44 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 152976428 Common - alpha amylase catalytic region Bcer98_2716 166 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 152977364 Common - Stage V sporulation AD family protein Bcer98_3689 15 None None None 152974393 Common - major facilitator superfamily MFS_1 Bcer98_0566 229 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152977447 Common - protein of unknown function DUF1659 Bcer98_3779 2 None None None 152974889 Common - hypothetical protein Bcer98_1085 8 COG2128 COG2128, Uncharacterized conserved protein Function unknown 152977147 Common - Nucleoside triphosphatase YtkD Bcer98_3459 25 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152974489 Pathogen - hypothetical protein Bcer98_0664 1 None None None 152974944 Common - diaminopimelate decarboxylase Bcer98_1141 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 152976566 Common - Transketolase central region Bcer98_2855 219 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 152974406 Pathogen - hypothetical protein Bcer98_0579 1 None None None 152976166 Common - aspartate kinase, monofunctional class Bcer98_2452 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 152977611 Common - multidrug resistance protein B Bcer98_3949 11 COG4485 COG4485, Predicted membrane protein Function unknown 152976174 Common - ribosomal protein S15 Bcer98_2460 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 152974403 Common - hypothetical protein Bcer98_0576 1 None None None 152976896 Common - amino acid adenylation domain Bcer98_3195 244 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152976262 Common - protein of unknown function DUF152 Bcer98_2550 178 COG1496 COG1496, Uncharacterized conserved protein Function unknown 152977335 Common - NERD domain protein Bcer98_3660 3 None None None 152975956 Common - protein of unknown function DUF997 Bcer98_2228 10 COG3924 COG3924, Predicted membrane protein Function unknown 152976150 Common - hypothetical protein Bcer98_2436 7 None None None 152977541 Pathogen - hypothetical protein Bcer98_3877 1 None None None 152974780 Common - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit Bcer98_0971 162 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 152976196 Common - 20S proteasome A and B subunits Bcer98_2482 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 152974198 Common - periplasmic binding protein Bcer98_0362 80 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 152975980 Common - protein of unknown function DUF205 Bcer98_2253 170 COG0344 COG0344, Predicted membrane protein Function unknown 152975400 Common - ABC transporter-related protein Bcer98_1613 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 152977153 Common - cytochrome d ubiquinol oxidase, subunit II Bcer98_3465 151 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 152975523 Common - AMP-dependent synthetase and ligase Bcer98_1744 184 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152974836 Common - transposase IS4 family protein Bcer98_1032 11 None None None 152976589 Common - acetyl-CoA carboxylase, biotin carboxyl carrier protein Bcer98_2878 172 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 152976894 Common - Beta-ketoacyl synthase Bcer98_3193 232 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152976221 Common - ATP-dependent DNA helicase RecG Bcer98_2507 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 152976401 Common - glutaredoxin-like protein, YruB-family Bcer98_2689 23 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 152974222 Common - Integral membrane protein TerC Bcer98_0387 126 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 152974764 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_0955 246 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 152975460 Pathogen - hypothetical protein Bcer98_1675 1 None None None 152975891 Common - major facilitator superfamily MFS_1 Bcer98_2156 26 None None None 152977478 Common - proton-translocating NADH-quinone oxidoreductase, chain M Bcer98_3810 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 152976545 Common - L-serine dehydratase, iron-sulfur-dependent, alpha subunit Bcer98_2834 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 152976877 Common - Sporulation stage VI protein D Bcer98_3176 3 None None None 152975815 Common - DNA helicase Bcer98_2072 79 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 152977509 Pathogen - hypothetical protein Bcer98_3844 1 None None None 152974868 Common - exsB protein Bcer98_1064 176 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 152977143 Common - ABC transporter-related protein Bcer98_3455 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 152975917 Pathogen - group-specific protein Bcer98_2188 1 None None None 152974275 Common - membrane-bound metal-dependent hydrolase Bcer98_0442 17 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 152974102 Common - DSBA oxidoreductase Bcer98_0258 84 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 152974263 Common - NAD-dependent epimerase/dehydratase Bcer98_0430 236 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152976481 Common - sodium:neurotransmitter symporter Bcer98_2770 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 152977636 Pathogen - hypothetical protein Bcer98_3977 1 None None None 152975870 Pathogen - hypothetical protein Bcer98_2130 1 None None None 152974433 Common - putative signal-transduction protein with CBS domains Bcer98_0607 190 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 152974495 Common - glucokinase regulatory-like protein Bcer98_0670 84 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 152976388 Common - peptide deformylase Bcer98_2676 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 152974371 Common - amino acid permease-associated region Bcer98_0544 179 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 152977173 Common - Mandelate racemase/muconate lactonizing protein Bcer98_3489 142 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 152976466 Common - beta-lactamase domain protein Bcer98_2755 122 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 152977117 Common - transcription activator effector binding Bcer98_3427 25 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 152977003 Common - protein of unknown function DUF161 Bcer98_3308 34 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152975370 Common - conserved hypothetical cytosolic protein Bcer98_1581 5 COG4495 COG4495, Uncharacterized protein conserved in bacteria Function unknown 152975406 Common - protein-L-IsoD(D-D) O-methyltransferase Bcer98_1619 16 None None None 152977380 Common - prolipoprotein diacylglyceryl transferase Bcer98_3705 163 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 152976561 Common - protein of unknown function DUF1094 Bcer98_2850 11 None None None 152975765 Common - phospho-2-dehydro-3-deoxyheptonate aldolase Bcer98_2014 188 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 152974386 Common - periplasmic binding protein/LacI transcriptional regulator Bcer98_0559 128 COG1609 PurR, Transcriptional regulators Transcription 152974603 Common - dihydroxyacetone kinase, DhaK subunit Bcer98_0787 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 152977437 Common - NLP/P60 protein Bcer98_3768 134 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 152974035 Common - ABC transporter-related protein Bcer98_0189 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 152975806 Common - Allophanate hydrolase subunit 1 Bcer98_2062 107 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 152976259 Common - protein of unknown function YGGT Bcer98_2547 90 COG0762 COG0762, Predicted integral membrane protein Function unknown 152976922 Common - Enoyl-CoA hydratase/isomerase Bcer98_3224 181 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 152974865 Common - oligoendopeptidase, M3 family Bcer98_1061 62 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 152976532 Common - LPXTG-motif cell wall anchor domain Bcer98_2821 120 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 152975079 Pathogen - spore coat protein D Bcer98_1279 1 None None None 152976381 Common - Domain of unknown function DUF1885 Bcer98_2669 2 None None None 152974366 Common - amino acid carrier protein Bcer98_0539 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 152975106 Pathogen - hypothetical protein Bcer98_1307 1 None None None 152975828 Common - phosphoserine aminotransferase Bcer98_2086 117 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 152974777 Common - cytidyltransferase-related domain Bcer98_0968 209 COG0196 RibF, FAD synthase Coenzyme metabolism 152974284 Common - protein of unknown function DUF939 Bcer98_0451 9 COG4129 COG4129, Predicted membrane protein Function unknown 152975730 Pathogen - hypothetical protein Bcer98_1974 1 None None None 152973950 Common - ribosomal protein L7Ae/L30e/S12e/Gadd45 Bcer98_0098 13 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 152975905 Common - hypothetical protein Bcer98_2175 2 None None None 152975725 Common - hypothetical protein Bcer98_1967 2 None None None 152976144 Common - metal dependent phosphohydrolase Bcer98_2430 77 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 152976964 Common - S-adenosylmethionine decarboxylase related Bcer98_3267 74 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 152977465 Common - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Bcer98_3797 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 152975628 Common - hypothetical protein Bcer98_1862 6 None None None 152973912 Common - hypoxanthine phosphoribosyltransferase Bcer98_0059 153 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 152975936 Common - methyl-accepting chemotaxis sensory transducer Bcer98_2208 154 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152976957 Common - ribosomal protein L35 Bcer98_3260 157 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 152975822 Common - hypothetical protein Bcer98_2080 1 None None None 152976684 Pathogen - hypothetical protein Bcer98_2978 1 None None None 152976479 Common - stage V sporulation protein AB Bcer98_2768 4 None None None 152977252 Common - Domain of unknown function DUF1805 Bcer98_3571 5 COG3377 COG3377, Uncharacterized conserved protein Function unknown 152975490 Common - hypothetical protein Bcer98_1709 5 None None None 152976652 Common - hypothetical protein Bcer98_2943 5 None None None 152977413 Common - hypothetical protein Bcer98_3741 5 None None None 152976949 Common - metal dependent phosphohydrolase Bcer98_3252 3 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 152976869 Common - DNA repair protein Bcer98_3168 9 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 152975186 Common - flagellar basal body rod protein Bcer98_1387 93 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 152977023 Common - hypothetical protein Bcer98_3328 10 None None None 152976863 Common - peptidase M23B Bcer98_3162 119 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152974174 Common - hypothetical protein Bcer98_0338 10 COG1618 COG1618, Predicted nucleotide kinase Nucleotide transport and metabolism 152974447 Pathogen - hypothetical protein Bcer98_0622 1 None None None 152976770 Common - hypothetical protein Bcer98_3066 2 None None None 152977622 Common - major facilitator superfamily MFS_1 Bcer98_3960 176 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152977612 Common - glycosyl transferase family 2 Bcer98_3950 198 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152974997 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bcer98_1197 205 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 152976653 Pathogen - hypothetical protein Bcer98_2944 1 None None None 152977036 Common - phospho-2-dehydro-3-deoxyheptonate aldolase Bcer98_3343 187 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 152976685 Common - metal dependent phosphohydrolase Bcer98_2979 71 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 152977047 Common - protein of unknown function DUF1444 Bcer98_3354 8 COG4848 COG4848, Uncharacterized protein conserved in bacteria Function unknown 152976327 Common - DNA replication protein-like protein Bcer98_2615 45 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 152974179 Common - polar amino acid ABC transporter, inner membrane subunit Bcer98_0343 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 152974434 Pathogen - hypothetical protein Bcer98_0608 1 None None None 152976089 Common - hypothetical protein Bcer98_2367 2 None None None 152976826 Common - adenine phosphoribosyltransferase Bcer98_3124 177 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 152975600 Common - AMP-dependent synthetase and ligase Bcer98_1828 128 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152974005 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Bcer98_0154 102 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 152976862 Common - peptidase M50 Bcer98_3161 74 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 152975583 Common - Enoyl-CoA hydratase/isomerase Bcer98_1806 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 152977625 Common - UDP-glucose 4-epimerase Bcer98_3965 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 152977350 Common - preprotein translocase, SecG subunit Bcer98_3675 5 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 152977671 Common - ribosomal protein S18 Bcer98_4012 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 152977196 Common - putative transcriptional regulator, AsnC family Bcer98_3513 58 COG1522 Lrp, Transcriptional regulators Transcription 152974026 Common - UBA/THIF-type NAD/FAD binding protein Bcer98_0178 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 152975244 Common - threonine dehydratase Bcer98_1447 213 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 152973995 Common - KinB signaling pathway activation protein Bcer98_0143 3 None None None 152975674 Common - Substrate-binding region of ABC-type glycine betaine transport system Bcer98_1909 71 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 152973896 Common - SpoVG family protein Bcer98_0043 24 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 152976841 Common - Domain of unkown function DUF1901 Bcer98_3140 2 None None None 152976053 Common - N-acetylmuramoyl-L-alanine amidase family 2 Bcer98_2329 23 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152975431 Common - channel protein, hemolysin III family Bcer98_1644 118 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 152974791 Common - transposase Bcer98_0984 17 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974611 Common - hypothetical protein Bcer98_0795 75 COG4717 COG4717, Uncharacterized conserved protein Function unknown 152974640 Common - protoporphyrinogen oxidase Bcer98_0826 56 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 152974876 Pathogen - hypothetical protein Bcer98_1072 1 None None None 152974145 Common - putative PAS/PAC sensor protein Bcer98_0304 174 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 152975503 Pathogen - hypothetical protein Bcer98_1723 1 None None None 152975660 Common - GCN5-related N-acetyltransferase Bcer98_1894 13 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152975573 Pathogen - hypothetical protein Bcer98_1796 1 None None None 152974114 Common - phosphoribosylformylglycinamidine synthase II Bcer98_0273 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 152975972 Common - oxidoreductase domain protein Bcer98_2245 144 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 152977170 Common - integral membrane sensor signal transduction histidine kinase Bcer98_3484 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152977090 Common - nitrate reductase, beta subunit Bcer98_3400 144 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 152975231 Common - GTP-binding protein HSR1-related Bcer98_1434 215 COG2262 HflX, GTPases General function prediction only 152977567 Common - hypothetical protein Bcer98_3905 3 COG4844 COG4844, Uncharacterized protein conserved in bacteria Function unknown 152976379 Common - hypothetical protein Bcer98_2667 2 None None None 152975654 Common - hypothetical protein Bcer98_1888 5 None None None 152974846 Common - polyhydroxyalkanoic acid synthase, PhaR subunit Bcer98_1042 6 COG5374 COG5374, Uncharacterized conserved protein Function unknown 152974851 Common - hypothetical protein Bcer98_1047 2 None None None 152974048 Common - protein of unknown function DUF161 Bcer98_0203 53 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152976884 Common - small GTP-binding protein Bcer98_3183 194 COG0218 COG0218, Predicted GTPase General function prediction only 152974130 Common - putative delta-1-pyrroline-5-carboxylate dehydrogenase Bcer98_0289 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152974535 Common - polysaccharide biosynthesis protein Bcer98_0712 58 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152976616 Common - ABC transporter permease protein Bcer98_2907 6 None None None 152975543 Pathogen - hypothetical protein Bcer98_1765 1 None None None 152976674 Pathogen - group-specific protein Bcer98_2966 1 None None None 152975202 Common - hypothetical protein Bcer98_1403 1 None None None 152975138 Common - metal dependent phosphohydrolase Bcer98_1339 45 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 152974704 Common - Beta-ketoacyl synthase Bcer98_0891 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152974723 Common - globin Bcer98_0911 69 COG2346 COG2346, Truncated hemoglobins General function prediction only 152976167 Common - aspartate-semialdehyde dehydrogenase Bcer98_2453 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 152976801 Common - Holliday junction resolvase YqgF Bcer98_3099 188 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 152975495 Common - alpha/beta hydrolase fold Bcer98_1714 151 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152973919 Common - aminotransferase class IV Bcer98_0066 195 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 152975916 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III Bcer98_2187 215 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 152977391 Common - transcriptional regulator, LysR family Bcer98_3716 193 COG0583 LysR, Transcriptional regulator Transcription 152974346 Common - Thermolysin Bcer98_0515 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 152977082 Common - molybdopterin biosynthesis MoaE protein Bcer98_3392 162 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 152974404 Pathogen - hypothetical protein Bcer98_0577 1 None None None 152976217 Common - 3-oxoacyl-(acyl-carrier-protein) reductase Bcer98_2503 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152977530 Common - acetyl-CoA acetyltransferase Bcer98_3865 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 152975946 Pathogen - IG hypothetical 17193 Bcer98_2218 1 None None None 152976575 Common - hypothetical protein Bcer98_2864 2 None None None 152973920 Common - dihydropteroate synthase Bcer98_0067 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 152976942 Pathogen - hypothetical protein Bcer98_3245 1 None None None 152976839 Common - Holliday junction DNA helicase RuvA Bcer98_3138 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 152977497 Common - ATP synthase F0, C subunit Bcer98_3830 26 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 152973884 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Bcer98_0031 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 152975426 Common - Thymidylate synthase Bcer98_1639 145 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 152975856 Common - cobalt transport protein Bcer98_2115 26 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 152976915 Common - succinate dehydrogenase or fumarate reductase, flavoprotein subunit Bcer98_3216 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 152976832 Common - hypothetical protein Bcer98_3130 4 None None None 152976427 Common - alpha amylase catalytic region Bcer98_2715 176 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 152977668 Common - ribosomal protein L9 Bcer98_4009 188 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 152974041 Common - 2,5-didehydrogluconate reductase Bcer98_0196 186 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 152975150 Common - flagellar hook-associated protein FlgK Bcer98_1351 117 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 152974548 Common - cell wall hydrolase/autolysin Bcer98_0725 143 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152974064 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0220 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 152975194 Common - hypothetical protein Bcer98_1395 1 None None None 152976456 Pathogen - hypothetical protein Bcer98_2745 1 None None None 152977666 Common - Adenylosuccinate synthase Bcer98_4007 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 152975795 Common - metallophosphoesterase Bcer98_2046 80 COG0622 COG0622, Predicted phosphoesterase General function prediction only 152976621 Pathogen - hypothetical protein Bcer98_2912 1 None None None 152976780 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_3078 42 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 152977394 Common - protein of unknown function DUF214 Bcer98_3722 109 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 152974101 Common - alpha/beta hydrolase Bcer98_0257 93 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 152977577 Common - TrkA-N domain protein Bcer98_3915 213 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 152976411 Common - polysaccharide deacetylase Bcer98_2699 96 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152975607 Pathogen - hypothetical protein Bcer98_1837 1 None None None 152974385 Common - drug resistance transporter, EmrB/QacA subfamily Bcer98_0558 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976133 Common - conserved repeat domain Bcer98_2418 11 None None None 152976299 Common - hypothetical protein Bcer98_2587 3 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 152974630 Common - ABC transporter-related protein Bcer98_0815 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975570 Common - transcriptional regulator, MarR family Bcer98_1793 37 COG1846 MarR, Transcriptional regulators Transcription 152977108 Common - ABC transporter-related protein Bcer98_3418 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152977277 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_3599 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152977238 Common - phosphatidylglycerophosphatase A Bcer98_3556 14 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 152977499 Common - ATP synthase I Bcer98_3832 4 None None None 152977400 Common - putative cold-shock DNA-binding domain protein Bcer98_3728 181 COG1278 CspC, Cold shock proteins Transcription 152977242 Common - fructose-1,6-bisphosphatase, class II Bcer98_3560 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 152977208 Common - thioesterase superfamily protein Bcer98_3526 88 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 152973869 Common - isochorismatase hydrolase Bcer98_0016 103 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 152976460 Common - PTS system, glucose-specific IIBC subunit Bcer98_2749 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 152974575 Pathogen - hypothetical protein Bcer98_0757 1 None None None 152976319 Common - RNA polymerase, sigma 28 subunit, FliA/WhiG family Bcer98_2607 29 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 152975031 Common - hypothetical protein Bcer98_1231 3 None None None 152976504 Common - NUDIX hydrolase Bcer98_2793 186 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 152977429 Common - cytochrome bd ubiquinol oxidase subunit I Bcer98_3760 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 152976518 Common - zinc finger CDGSH-type domain protein Bcer98_2807 12 COG3369 COG3369, Uncharacterized conserved protein Function unknown 152974120 Common - major facilitator superfamily MFS_1 Bcer98_0279 63 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976607 Common - iron dependent repressor Bcer98_2897 98 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 152973879 Common - DNA polymerase III, delta prime subunit Bcer98_0026 224 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 152975030 Common - hypothetical protein Bcer98_1230 2 None None None 152974715 Common - hypothetical protein Bcer98_0903 2 None None None 152976517 Common - hypothetical protein Bcer98_2806 2 None None None 152976971 Common - two component transcriptional regulator, winged helix family Bcer98_3274 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976901 Common - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family Bcer98_3201 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 152974233 Common - YhhN family protein Bcer98_0399 9 None None None 152976204 Common - GTP-binding protein HSR1-related Bcer98_2490 150 COG1161 COG1161, Predicted GTPases General function prediction only 152974168 Common - transport system permease protein Bcer98_0329 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 152977370 Common - Phosphotransferase system, phosphocarrier protein HPr Bcer98_3695 139 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 152977605 Common - thioesterase superfamily protein Bcer98_3943 135 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 152976309 Common - phage terminase, small subunit, putative, P27 family Bcer98_2597 4 COG3747 COG3747, Phage terminase, small subunit DNA replication, recombination, and repair 152976342 Common - Patatin Bcer98_2630 134 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 152974697 Common - hypothetical protein Bcer98_0884 3 None None None 152976437 Common - NADH dehydrogenase subunit N Bcer98_2726 3 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 152975114 Common - Mg(2+) P-type ATPase-like protein Bcer98_1315 151 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 152976739 Common - ribosomal protein S21 Bcer98_3035 101 None None None 152976791 Common - protein of unknown function DUF1510 Bcer98_3089 4 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 152976354 Common - Cytochrome c oxidase caa3 type assembly factor CtaG Bcer98_2642 21 COG3336 COG3336, Predicted membrane protein Function unknown 152974492 Common - potassium efflux system protein Bcer98_0667 207 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 152975646 Common - PAS/PAC sensor signal transduction histidine kinase Bcer98_1880 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152976110 Common - PTS system, fructose subfamily, IIC subunit Bcer98_2394 142 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 152974093 Common - lipoprotein, putative Bcer98_0249 2 None None None 152975222 Pathogen - hypothetical protein Bcer98_1425 1 None None None 152976210 Common - ribosomal protein S16 Bcer98_2496 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 152977223 Common - major facilitator superfamily MFS_1 Bcer98_3541 119 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152977269 Common - hypothetical protein Bcer98_3590 15 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 152974897 Common - hypothetical protein Bcer98_1093 4 None None None 152976703 Common - phosphate ABC transporter, inner membrane subunit PstA Bcer98_2998 225 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 152975554 Common - putative cold-shock DNA-binding domain protein Bcer98_1777 182 COG1278 CspC, Cold shock proteins Transcription 152976881 Common - porphobilinogen deaminase Bcer98_3180 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 152977425 Common - phosphotransferase system PTS lactose/cellobiose-specific IIA subunit Bcer98_3755 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 152973906 Common - YabP family protein Bcer98_0053 15 None None None 152975014 Common - Glu/Leu/Phe/Val dehydrogenase Bcer98_1214 179 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 152974431 Common - phosphate ABC transporter, inner membrane subunit PstA Bcer98_0605 229 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 152976012 Common - Integrase catalytic region Bcer98_2285 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 152976080 Common - beta-lactamase Bcer98_2357 96 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152974808 Pathogen - SinI anti-repressor domain protein Bcer98_1004 1 None None None 152975597 Common - FAD dependent oxidoreductase Bcer98_1825 64 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 152974631 Common - ABC transporter EcsB Bcer98_0816 13 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 152976724 Common - RNA polymerase, sigma 70 subunit, RpoD family Bcer98_3019 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 152977050 Common - transposase, IS605 OrfB family Bcer98_3357 73 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975845 Common - alpha/beta hydrolase fold Bcer98_2104 179 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152974549 Common - magnesium transporter Bcer98_0726 157 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 152973992 Common - N-acetylmuramoyl-L-alanine amidase CwlD Bcer98_0140 134 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152975382 Common - hypothetical protein Bcer98_1594 2 None None None 152974440 Common - NMT1/THI5 like domain protein Bcer98_0615 107 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 152977685 Common - 60 kDa inner membrane insertion protein Bcer98_4026 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 152975932 Common - acyltransferase 3 Bcer98_2204 26 COG3594 NolL, Fucose 4-O-acetylase and related acetyltransferases Carbohydrate transport and metabolism 152975998 Pathogen - hypothetical protein Bcer98_2271 1 None None None 152976813 Common - AAA ATPase central domain protein Bcer98_3111 247 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 152973966 Common - ribosomal protein L14 Bcer98_0114 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 152974172 Common - DNA binding domain, excisionase family Bcer98_0333 2 None None None 152975276 Pathogen - hypothetical protein Bcer98_1482 1 None None None 152977432 Common - L-lactate transport Bcer98_3763 101 COG1620 LldP, L-lactate permease Energy production and conversion 152974964 Common - branched-chain amino acid transport system II carrier protein Bcer98_1161 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 152973933 Common - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Bcer98_0080 197 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 152977306 Pathogen - hypothetical protein Bcer98_3631 1 None None None 152977570 Common - phosphate acetyltransferase Bcer98_3908 164 COG0280 Pta, Phosphotransacetylase Energy production and conversion 152975456 Common - arginine/ornithine antiporter Bcer98_1671 174 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 152974153 Common - dihydrouridine synthase DuS Bcer98_0312 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 152975827 Common - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bcer98_2085 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 152974828 Common - protein of unknown function DUF224 cysteine-rich region domain protein Bcer98_1024 169 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 152973927 Common - UvrB/UvrC protein Bcer98_0074 22 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 152974055 Common - VanZ family protein Bcer98_0210 10 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 152976999 Pathogen - hypothetical protein Bcer98_3303 1 None None None 152975119 Common - protein of unknown function DUF6 transmembrane Bcer98_1320 152 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 152976742 Common - ribosomal protein L11 methyltransferase Bcer98_3038 189 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 152976023 Common - Methyltransferase type 11 Bcer98_2299 37 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 152976796 Common - peptidase U32 Bcer98_3094 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 152976951 Common - drug resistance transporter, EmrB/QacA subfamily Bcer98_3254 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152977377 Common - Tetratricopeptide TPR_2 repeat protein Bcer98_3702 13 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 152974796 Pathogen - hypothetical protein Bcer98_0991 1 None None None 152977077 Common - hypothetical protein Bcer98_3387 1 None None None 152975633 Common - glycosyl transferase family 2 Bcer98_1867 75 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152975986 Common - hypothetical protein Bcer98_2259 2 None None None 152977516 Common - Thymidine kinase Bcer98_3851 92 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 152974745 Common - hypothetical protein Bcer98_0935 4 None None None 152976029 Common - protein of unknown function DUF161 Bcer98_2305 49 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152974324 Common - Ankyrin Bcer98_0493 101 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 152974292 Common - ferric uptake regulator, Fur family Bcer98_0459 209 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 152974624 Common - FAD dependent oxidoreductase Bcer98_0808 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 152976363 Common - protein of unknown function DUF1507 Bcer98_2651 7 COG4838 COG4838, Uncharacterized protein conserved in bacteria Function unknown 152974933 Common - Imidazoleglycerol-phosphate dehydratase Bcer98_1130 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 152975884 Pathogen - hypothetical protein Bcer98_2147 1 None None None 152977186 Common - glucose-1-phosphate adenylyltransferase Bcer98_3503 222 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 152974374 Common - two component transcriptional regulator, winged helix family Bcer98_0547 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976098 Common - putative transcriptional regulator, MerR family Bcer98_2382 59 COG0789 SoxR, Predicted transcriptional regulators Transcription 152974755 Common - Phosphoesterase HXTX Bcer98_0945 22 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 152974778 Common - protein of unknown function DUF485 Bcer98_0969 7 COG3162 COG3162, Predicted membrane protein Function unknown 152977588 Common - protein of unknown function DUF74 Bcer98_3926 103 COG0393 COG0393, Uncharacterized conserved protein Function unknown 152974867 Pathogen - hypothetical protein Bcer98_1063 1 None None None 152974895 Common - membrane bound O-acyl transferase MBOAT family protein Bcer98_1091 86 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 152976137 Common - protein of unknown function DUF1333 Bcer98_2423 8 COG4550 COG4550, Predicted membrane protein Function unknown 152977007 Common - Redoxin domain protein Bcer98_3312 115 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 152974792 Pathogen - hypothetical protein Bcer98_0987 1 None None None 152976634 Common - comG operon protein 4 Bcer98_2925 6 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 152977140 Common - hypothetical protein Bcer98_3452 8 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 152975383 Common - DEAD/DEAH box helicase domain protein Bcer98_1595 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 152975779 Common - Antibiotic biosynthesis monooxygenase Bcer98_2029 4 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 152975841 Pathogen - hypothetical protein Bcer98_2100 1 None None None 152977597 Common - glycosyl transferase group 1 Bcer98_3935 222 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 152976480 Common - stage V sporulation protein AA Bcer98_2769 4 None None None 152975816 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_2073 72 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152974565 Pathogen - hypothetical protein Bcer98_0744 2 None None None 152977000 Common - argininosuccinate lyase Bcer98_3305 237 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 152975107 Common - GCN5-related N-acetyltransferase Bcer98_1308 32 COG0456 RimI, Acetyltransferases General function prediction only 152975376 Common - hypothetical protein Bcer98_1588 5 None None None 152977356 Common - Phosphoglycerate kinase Bcer98_3681 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 152974196 Common - transport system permease protein Bcer98_0360 100 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 152976037 Common - HutP family protein Bcer98_2313 2 None None None 152976775 Common - alpha/beta hydrolase fold Bcer98_3071 181 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152976787 Common - Pyridoxal-5'-phosphate-dependent protein beta subunit Bcer98_3085 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 152974564 Common - conserved hypothetical membrane spanning protein Bcer98_0743 3 None None None 152975682 Common - ATP-dependent DNA helicase RecQ Bcer98_1919 237 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 152975401 Common - protein of unknown function DUF1112 Bcer98_1614 28 COG4760 COG4760, Predicted membrane protein Function unknown 152976118 Common - formate/nitrite transporter Bcer98_2402 99 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 152976393 Common - cytochrome d ubiquinol oxidase, subunit II-related protein Bcer98_2681 4 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 152977628 Common - Amidohydrolase 3 Bcer98_3968 49 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 152977502 Common - Glycine hydroxymethyltransferase Bcer98_3835 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 152977125 Common - GCN5-related N-acetyltransferase Bcer98_3436 131 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152973878 Common - dTMP kinase Bcer98_0025 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 152973956 Common - ribosomal protein L3 Bcer98_0104 248 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 152975008 Common - ATP-dependent DNA helicase, RecQ family Bcer98_1208 236 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 152975733 Common - hypothetical protein Bcer98_1979 2 None None None 152974738 Common - protein of unknown function DUF1360 Bcer98_0926 4 None None None 152975718 Common - hypothetical protein Bcer98_1959 4 None None None 152975924 Common - Citrate transporter Bcer98_2196 138 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 152975875 Common - malate--quinone oxidoreductase Bcer98_2135 58 COG0579 COG0579, Predicted dehydrogenase General function prediction only 152976467 Common - putative transcriptional regulator Bcer98_2756 145 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 152975247 Common - hypothetical protein Bcer98_1452 4 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974148 Common - small multidrug resistance protein Bcer98_0307 143 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 152975078 Common - hypothetical protein Bcer98_1278 2 None None None 152975354 Common - glycosyltransferase, MGT family Bcer98_1565 64 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 152975906 Common - protein of unknown function DUF909 Bcer98_2176 7 COG4842 COG4842, Uncharacterized protein conserved in bacteria Function unknown 152974439 Common - binding-protein-dependent transport systems inner membrane component Bcer98_0614 186 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 152974576 Common - phosphoribosyl-ATP pyrophosphohydrolase Bcer98_0758 12 COG4997 COG4997, Uncharacterized conserved protein Function unknown 152977006 Common - N-6 DNA methylase Bcer98_3311 14 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 152977621 Common - signal transduction histidine kinase, LytS Bcer98_3959 104 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 152974750 Common - dTDP-4-dehydrorhamnose reductase Bcer98_0940 203 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 152977061 Common - regulatory protein DeoR Bcer98_3368 2 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 152975321 Common - methylated-DNA--protein-cysteine methyltransferase Bcer98_1530 218 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 152975371 Pathogen - hypothetical protein Bcer98_1582 1 None None None 152975658 Common - transcriptional activator, TenA family Bcer98_1892 78 COG0819 TenA, Putative transcription activator Transcription 152975715 Common - beta-lactamase Bcer98_1955 144 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152976836 Common - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Bcer98_3135 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 152977042 Common - UDP-N-acetylmuramate--alanine ligase Bcer98_3349 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 152976807 Common - hypothetical protein Bcer98_3105 9 None None None 152977243 Common - hypothetical protein Bcer98_3561 3 None None None 152977273 Common - acyl-CoA dehydrogenase domain protein Bcer98_3595 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 152976199 Common - DNA topoisomerase I Bcer98_2485 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 152974683 Common - protein of unknown function DUF1516 Bcer98_0870 5 None None None 152974068 Common - Cof-like hydrolase Bcer98_0224 128 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152974539 Common - hypothetical protein Bcer98_0716 5 None None None 152976213 Common - signal recognition particle-docking protein FtsY Bcer98_2499 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 152976569 Common - Butyrate kinase Bcer98_2858 147 COG3426 COG3426, Butyrate kinase Energy production and conversion 152975703 Common - hypothetical protein Bcer98_1942 4 None None None 152976586 Common - NusB antitermination factor Bcer98_2875 205 COG0781 NusB, Transcription termination factor Transcription 152975146 Common - Protein-glutamate O-methyltransferase Bcer98_1347 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 152977336 Common - Alcohol dehydrogenase zinc-binding domain protein Bcer98_3661 212 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 152974677 Common - spore germination protein PC Bcer98_0864 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152976579 Common - arginine repressor, ArgR Bcer98_2868 80 COG1438 ArgR, Arginine repressor Transcription 152976849 Common - MOSC domain containing protein Bcer98_3148 79 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 152974862 Common - stage 0 sporulation regulatory protein Bcer98_1058 2 None None None 152975568 Common - ATPase BadF/BadG/BcrA/BcrD type Bcer98_1791 62 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 152975347 Common - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Bcer98_1557 42 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152975173 Common - glycosyl transferase group 1 Bcer98_1374 120 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 152974260 Common - PTS system, N-acetylglucosamine-specific IIBC subunit Bcer98_0427 51 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 152976486 Common - regulatory protein GntR HTH Bcer98_2775 140 COG1725 COG1725, Predicted transcriptional regulators Transcription 152973929 Common - ATPase AAA-2 domain protein Bcer98_0076 235 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 152977144 Common - binding-protein-dependent transport systems inner membrane component Bcer98_3456 167 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 152974134 Common - NLPA lipoprotein Bcer98_0293 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 152975327 Common - NUDIX hydrolase Bcer98_1536 58 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152976732 Common - diacylglycerol kinase Bcer98_3028 88 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 152974155 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_0314 246 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 152975942 Common - protein of unknown function UPF0061 Bcer98_2214 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 152975050 Common - integral membrane protein TIGR01906 Bcer98_1250 10 COG4478 COG4478, Predicted membrane protein Function unknown 152975408 Common - Propeptide peptidase M4 and M36 Bcer98_1621 11 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 152974270 Common - regulatory protein RecX Bcer98_0437 44 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 152977431 Common - thiamine biosynthesis protein ThiC Bcer98_3762 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 152975786 Common - hypothetical protein Bcer98_2036 3 None None None 152975955 Common - sodium/pantothenate symporter Bcer98_2227 174 COG4145 PanF, Na+/panthothenate symporter Coenzyme metabolism 152976570 Common - Glu/Leu/Phe/Val dehydrogenase Bcer98_2859 124 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 152974763 Pathogen - hypothetical protein Bcer98_0954 1 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 152977471 Common - ABC transporter-related protein Bcer98_3803 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975962 Common - protein of unknown function DUF1294 Bcer98_2235 22 COG3326 COG3326, Predicted membrane protein Function unknown 152974705 Common - conserved hypothetical cytosolic protein Bcer98_0892 3 COG5504 COG5504, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 152974298 Common - protein of unknown function DUF28 Bcer98_0465 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 152976175 Common - riboflavin biosynthesis protein RibF Bcer98_2461 211 COG0196 RibF, FAD synthase Coenzyme metabolism 152974972 Common - PTS system, fructose subfamily, IIC subunit Bcer98_1170 131 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 152975603 Common - 4'-phosphopantetheinyl transferase Bcer98_1832 59 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 152974279 Common - hypothetical protein Bcer98_0446 3 None None None 152974584 Common - YhjC Bcer98_0766 5 None None None 152976537 Common - acetylornithine and succinylornithine aminotransferase Bcer98_2826 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 152976562 Common - hypothetical protein Bcer98_2851 7 None None None 152975200 Pathogen - hypothetical protein Bcer98_1401 1 None None None 152976855 Common - two component transcriptional regulator, winged helix family Bcer98_3154 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152975356 Common - putative transcriptional regulator, GntR family Bcer98_1567 177 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 152976550 Common - Sporulation lipoprotein YhcN/YlaJ Bcer98_2839 8 None None None 152975465 Common - histidine kinase Bcer98_1680 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152975892 Common - transposase Bcer98_2159 3 None None None 152974268 Common - hypothetical protein Bcer98_0435 3 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152974336 Common - formate dehydrogenase, alpha subunit Bcer98_0505 216 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 152974525 Common - hypothetical protein Bcer98_0702 6 None None None 152975524 Common - hypothetical protein Bcer98_1745 5 None None None 152975553 Common - cold shock protein Bcer98_1776 2 None None None 152974399 Common - Undecaprenyl-diphosphatase Bcer98_0572 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 152977110 Pathogen - hypothetical protein Bcer98_3420 1 None None None 152975318 Pathogen - hypothetical protein Bcer98_1527 1 None None None 152977299 Common - peptidase M4 thermolysin Bcer98_3622 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 152976186 Common - putative membrane-associated zinc metalloprotease Bcer98_2472 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 152975394 Pathogen - hypothetical protein Bcer98_1607 1 None None None 152976603 Common - 3-dehydroquinate dehydratase, type II Bcer98_2893 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 152976673 Pathogen - hypothetical protein Bcer98_2965 1 None None None 152975741 Common - pantothenate kinase Bcer98_1989 5 COG5146 PanK, Pantothenate kinase, acetyl-CoA regulated Coenzyme metabolism 152974049 Common - siroheme synthase Bcer98_0204 136 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 152976416 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase Bcer98_2704 139 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 152976030 Common - glyoxalase/bleomycin resistance protein Bcer98_2306 16 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 152974212 Common - transcriptional regulator, TetR family Bcer98_0376 49 COG1309 AcrR, Transcriptional regulator Transcription 152974911 Common - hypothetical protein Bcer98_1107 40 COG3002 COG3002, Uncharacterized protein conserved in bacteria Function unknown 152976649 Pathogen - hypothetical protein Bcer98_2940 2 None None None 152974598 Pathogen - Protein of unkown function DUF1796 putative papain-like cysteine peptidase Bcer98_0781 1 None None None 152977548 Common - spermidine synthase Bcer98_3884 118 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 152977226 Common - iron-sulfur cluster assembly accessory protein Bcer98_3544 163 COG0316 IscA, Uncharacterized conserved protein Function unknown 152976238 Common - protein of unknown function DUF370 Bcer98_2524 33 COG2052 COG2052, Uncharacterized protein conserved in bacteria Function unknown 152976891 Pathogen - hypothetical protein Bcer98_3190 1 None None None 152974421 Common - hypothetical protein Bcer98_0595 6 None None None 152976224 Common - ribosomal protein L28 Bcer98_2510 73 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 152977094 Pathogen - hypothetical protein Bcer98_3404 1 None None None 152975197 Common - major facilitator superfamily MFS_1 Bcer98_1398 150 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152977647 Common - Tetratricopeptide domain protein Bcer98_3988 2 None None None 152975479 Common - hypothetical protein Bcer98_1694 2 None None None 152976328 Common - primosome, DnaD subunit Bcer98_2616 4 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 152977081 Common - molybdopterin converting factor, subunit 1 Bcer98_3391 18 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 152974188 Common - putative transcriptional regulator, Crp/Fnr family Bcer98_0352 139 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 152976336 Common - transcriptional regulator, XRE family Bcer98_2624 15 COG1476 COG1476, Predicted transcriptional regulators Transcription 152977217 Common - hypothetical protein Bcer98_3535 3 None None None 152976452 Common - 6-phosphogluconate dehydrogenase NAD-binding Bcer98_2741 195 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 152975190 Common - AzlC family protein Bcer98_1391 110 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 152976759 Common - Methyltransferase type 11 Bcer98_3055 105 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 152975063 Common - pantoate--beta-alanine ligase Bcer98_1263 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 152976544 Common - pyrroline-5-carboxylate reductase Bcer98_2833 216 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 152976192 Common - translation elongation factor Ts Bcer98_2478 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 152977160 Pathogen - hypothetical protein Bcer98_3472 1 None None None 152975270 Common - betaine aldehyde dehydrogenase Bcer98_1476 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152974871 Common - GTP cyclohydrolase I Bcer98_1067 145 COG0780 COG0780, Enzyme related to GTP cyclohydrolase I General function prediction only 152974999 Common - cytochrome c assembly protein Bcer98_1199 89 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 152975690 Common - transcriptional regulator, MarR family Bcer98_1927 15 COG1846 MarR, Transcriptional regulators Transcription 152975530 Common - Carboxymuconolactone decarboxylase Bcer98_1752 73 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 152976879 Common - Porphobilinogen synthase Bcer98_3178 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 152974359 Common - small acid-soluble spore H family protein Bcer98_0530 3 None None None 152975689 Common - chitin-binding domain 3 protein Bcer98_1926 29 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 152976279 Common - cell division protein FtsL Bcer98_2567 6 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 152974505 Pathogen - hypothetical protein Bcer98_0681 1 None None None 152974921 Common - Sporulation protein YtfJ Bcer98_1117 20 COG3874 COG3874, Uncharacterized conserved protein Function unknown 152975800 Common - phosphoesterase PA-phosphatase related Bcer98_2053 69 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 152977511 Common - Sua5/YciO/YrdC/YwlC family protein Bcer98_3846 237 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 152974332 Common - GCN5-related N-acetyltransferase Bcer98_0501 68 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152974759 Common - sodium/proline symporter Bcer98_0949 190 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 152976701 Common - phosphate uptake regulator, PhoU Bcer98_2996 201 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 152976851 Common - protein of unknown function DUF214 Bcer98_3150 17 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 152975812 Pathogen - hypothetical protein Bcer98_2068 1 None None None 152975085 Common - hypothetical protein Bcer98_1285 6 None None None 152976752 Common - spore protease Bcer98_3048 15 None None None 152975848 Common - 6-aminohexanoate-dimer hydrolase Bcer98_2107 84 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152976074 Pathogen - integrase/recombinase, phage integrase family Bcer98_2350 1 None None None 152976919 Common - thioredoxin Bcer98_3221 230 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 152974256 Common - Sporulation protein YtaF Bcer98_0423 14 COG1971 COG1971, Predicted membrane protein Function unknown 152976302 Common - phage protein, HK97 gp10 family Bcer98_2590 5 None None None 152975977 Common - two component transcriptional regulator, winged helix family Bcer98_2250 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976645 Pathogen - hypothetical protein Bcer98_2936 1 None None None 152973982 Common - ribosomal protein S11 Bcer98_0130 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 152975349 Common - protein of unknown function DUF107 Bcer98_1559 62 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 152973945 Common - ribosomal protein L1 Bcer98_0092 243 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 152974141 Common - diacylglycerol kinase catalytic region Bcer98_0300 124 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 152977388 Pathogen - hypothetical protein Bcer98_3713 1 None None None 152974589 Common - protein of unknown function DUF849 Bcer98_0771 63 COG3246 COG3246, Uncharacterized conserved protein Function unknown 152975638 Pathogen - hypothetical protein Bcer98_1872 1 None None None 152974224 Common - toxic anion resistance family protein Bcer98_0389 40 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 152975539 Common - 4'-phosphopantetheinyl transferase Bcer98_1761 62 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 152976014 Common - transcriptional regulator Bcer98_2287 2 None None None 152975594 Common - putative transcriptional regulator, MerR family Bcer98_1820 36 COG0789 SoxR, Predicted transcriptional regulators Transcription 152977670 Common - hypothetical protein Bcer98_4011 15 COG4241 COG4241, Predicted membrane protein Function unknown 152974315 Common - transcriptional regulator, XRE family Bcer98_0482 3 COG1396 HipB, Predicted transcriptional regulators Transcription 152977539 Common - methionine aminopeptidase, type I Bcer98_3875 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 152974978 Common - phosphate transporter Bcer98_1178 168 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 152977551 Common - Glycerophosphodiester phosphodiesterase Bcer98_3887 175 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 152977527 Common - acyl-CoA dehydrogenase domain protein Bcer98_3862 166 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 152975224 Common - Aspartate--ammonia ligase Bcer98_1427 31 COG2502 AsnA, Asparagine synthetase A Amino acid transport and metabolism 152974788 Pathogen - hypothetical protein Bcer98_0981 1 None None None 152976340 Common - protein of unknown function DUF795 Bcer98_2628 24 COG1323 COG1323, Predicted nucleotidyltransferase General function prediction only 152975549 Pathogen - hypothetical protein Bcer98_1772 1 None None None 152974903 Common - glycosyl transferase family 2 Bcer98_1099 112 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152975015 Pathogen - hypothetical protein Bcer98_1215 1 None None None 152975307 Common - methyl-accepting chemotaxis sensory transducer Bcer98_1516 171 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152975365 Common - conserved hypothetical membrane associated protein Bcer98_1576 7 COG4499 COG4499, Predicted membrane protein Function unknown 152974291 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bcer98_0458 227 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 152975298 Pathogen - hypothetical protein Bcer98_1506 1 None None None 152975762 Common - transcriptional antiterminator, BglG Bcer98_2011 46 COG3711 BglG, Transcriptional antiterminator Transcription 152974300 Common - DSBA oxidoreductase Bcer98_0467 95 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 152976058 Common - protein of unknown function UPF0154 Bcer98_2334 1 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 152977011 Common - Amidohydrolase 3 Bcer98_3316 113 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 152976833 Common - short-chain dehydrogenase/reductase SDR Bcer98_3132 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152976440 Common - 3-hydroxybutyrate dehydrogenase Bcer98_2729 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152975211 Common - protein of unknown function DUF6 transmembrane Bcer98_1412 80 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 152976128 Pathogen - hypothetical protein Bcer98_2412 1 None None None 152975457 Pathogen - hypothetical protein Bcer98_1672 1 None None None 152977482 Common - NADH-quinone oxidoreductase, chain I Bcer98_3814 192 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 152976449 Common - Acireductone dioxygenase ARD Bcer98_2738 37 COG1791 COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 152977459 Common - ABC transporter, substrate-binding protein Bcer98_3791 78 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 152976792 Common - penicillin-binding protein transpeptidase Bcer98_3090 192 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 152976297 Common - phage putative tail component Bcer98_2585 9 COG4722 COG4722, Phage-related protein Function unknown 152975080 Common - protein of unknown function DUF1273 Bcer98_1280 11 COG4474 COG4474, Uncharacterized protein conserved in bacteria Function unknown 152975504 Common - Citrate (Si)-synthase Bcer98_1724 194 COG0372 GltA, Citrate synthase Energy production and conversion 152976156 Common - ABC transporter-related protein Bcer98_2442 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 152977448 Common - hypothetical protein Bcer98_3780 3 None None None 152974984 Pathogen - group-specific protein Bcer98_1184 1 None None None 152975412 Common - major facilitator superfamily MFS_1 Bcer98_1625 78 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976614 Common - small multidrug resistance protein Bcer98_2904 129 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 152974082 Common - alanine racemase Bcer98_0238 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 152976121 Common - putative esterase Bcer98_2405 47 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 152977159 Common - phage shock protein A, PspA Bcer98_3471 77 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 152976996 Common - short-chain dehydrogenase/reductase SDR Bcer98_3300 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152977164 Common - putative proton-coupled thiamine transporter YuaJ Bcer98_3476 13 COG3859 COG3859, Predicted membrane protein Function unknown 152975093 Common - phage portal protein SPP1 Bcer98_1293 11 None None None 152976871 Common - DNA repair protein RadC Bcer98_3170 176 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 152974245 Common - DNA-3-methyladenine glycosylase II Bcer98_0411 118 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 152976349 Common - Phosphoglycerate mutase Bcer98_2637 135 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 152976854 Common - integral membrane sensor signal transduction histidine kinase Bcer98_3153 188 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974105 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0263 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 152976026 Common - hypothetical protein Bcer98_2302 17 COG5460 COG5460, Uncharacterized conserved protein Function unknown 152977239 Common - HAD-superfamily subfamily IIA hydrolase like protein Bcer98_3557 112 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 152977369 Common - ATP-dependent Clp protease, proteolytic subunit ClpP Bcer98_3694 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 152975961 Common - RarD protein, DMT superfamily transporter Bcer98_2234 98 COG2962 RarD, Predicted permeases General function prediction only 152973953 Common - translation elongation factor G Bcer98_0101 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 152977322 Common - UDP-N-acetylenolpyruvoylglucosamine reductase Bcer98_3647 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 152975582 Common - pyruvate carboxyltransferase Bcer98_1805 188 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 152974347 Common - SNARE associated Golgi protein Bcer98_0516 48 COG0398 COG0398, Uncharacterized conserved protein Function unknown 152976013 Common - NAD-dependent epimerase/dehydratase Bcer98_2286 72 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152977185 Common - glucose-1-phosphate adenylyltransferase, GlgD subunit Bcer98_3502 114 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 152976261 Common - alanine racemase domain protein Bcer98_2549 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 152975518 Pathogen - peptidase, M23/M37 family Bcer98_1738 1 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152976160 Common - transposase, IS605 OrfB family Bcer98_2446 75 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974918 Common - sodium:dicarboxylate symporter Bcer98_1114 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 152976929 Common - histidine kinase Bcer98_3232 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152973862 Common - inosine-5'-monophosphate dehydrogenase Bcer98_0008 238 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 152974651 Common - beta-lactamase domain protein Bcer98_0838 104 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 152974193 Common - ABC-2 type transporter Bcer98_0357 44 COG1511 COG1511, Predicted membrane protein Function unknown 152974510 Common - ABC transporter-related protein Bcer98_0686 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 152973963 Common - ribosomal protein L16 Bcer98_0111 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 152976384 Common - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase Bcer98_2672 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 152974052 Common - nitrite reductase (NAD(P)H), small subunit Bcer98_0207 74 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 152975636 Common - putative transcriptional regulator, GntR family Bcer98_1870 229 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 152975645 Common - protein of unknown function DUF453 Bcer98_1879 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 152976341 Common - peptidase S16 lon domain protein Bcer98_2629 126 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 152976749 Common - intracellular protease, PfpI family Bcer98_3045 126 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 152974458 Common - ErfK/YbiS/YcfS/YnhG family protein Bcer98_0633 97 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 152973932 Common - PilT protein domain protein Bcer98_0079 48 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 152974257 Pathogen - hypothetical protein Bcer98_0424 1 None None None 152973921 Common - dihydroneopterin aldolase Bcer98_0068 123 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 152976982 Common - acetyl-CoA carboxylase, carboxyl transferase, beta subunit Bcer98_3285 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 152977236 Common - nitrogen-fixing NifU domain protein Bcer98_3554 109 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 152975155 Common - flagellar basal-body rod protein FlgB Bcer98_1356 4 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 152975997 Common - hypothetical protein Bcer98_2270 1 None None None 152976706 Common - penicillin-binding protein transpeptidase Bcer98_3001 204 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 152974200 Common - thiamine-phosphate pyrophosphorylase Bcer98_0364 176 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 152977349 Common - carboxylesterase Bcer98_3674 52 COG1647 COG1647, Esterase/lipase General function prediction only 152974859 Common - class II aldolase/adducin family protein Bcer98_1055 24 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 152975309 Pathogen - hypothetical protein Bcer98_1518 1 None None None 152977183 Common - glycogen/starch/alpha-glucan phosphorylase Bcer98_3500 138 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 152976834 Common - preprotein translocase, YajC subunit Bcer98_3133 179 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 152975016 Common - N-acetylmuramoyl-L-alanine amidase family 2 Bcer98_1216 6 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152976718 Common - DEAD/DEAH box helicase domain protein Bcer98_3013 239 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 152974639 Common - Ferrochelatase Bcer98_0825 148 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 152975985 Common - small acid-soluble spore N family protein Bcer98_2258 2 None None None 152974034 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit Bcer98_0188 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 152976816 Common - LPXTG-motif cell wall anchor domain Bcer98_3114 13 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 152976776 Common - DoxX family protein Bcer98_3072 10 COG2259 COG2259, Predicted membrane protein Function unknown 152976985 Common - DNA polymerase III, alpha subunit Bcer98_3288 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 152974169 Common - periplasmic binding protein Bcer98_0330 59 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 152975284 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_1490 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152977428 Pathogen - group-specific protein Bcer98_3759 1 None None None 152977055 Common - tRNA (guanine-N(7)-)-methyltransferase Bcer98_3362 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 152977078 Common - transcriptional regulator, CarD family Bcer98_3388 84 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 152976081 Pathogen - hypothetical protein Bcer98_2358 1 None None None 152977132 Common - transcriptional antiterminator, BglG Bcer98_3443 20 COG3711 BglG, Transcriptional antiterminator Transcription 152973914 Common - putative transcriptional acitvator, Baf family Bcer98_0061 135 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 152975839 Common - hypothetical protein Bcer98_2098 2 None None None 152976090 Common - protein of unknown function DUF81 Bcer98_2368 99 COG0730 COG0730, Predicted permeases General function prediction only 152974285 Common - Glutamate synthase (ferredoxin) Bcer98_0452 202 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 152976470 Common - GCN5-related N-acetyltransferase Bcer98_2759 6 None None None 152974638 Common - uroporphyrinogen decarboxylase Bcer98_0824 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 152976298 Common - phage tail tape measure protein, TP901 family Bcer98_2586 96 COG5283 COG5283, Phage-related tail protein Function unknown 152976613 Common - transcriptional regulator, TetR family Bcer98_2903 41 COG1309 AcrR, Transcriptional regulator Transcription 152975149 Pathogen - hypothetical protein Bcer98_1350 1 None None None 152974625 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Bcer98_0809 162 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 152976725 Common - DNA primase Bcer98_3020 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 152976937 Common - MutS2 family protein Bcer98_3240 201 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 152975467 Common - aminotransferase class-III Bcer98_1682 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 152974365 Common - amino acid permease-associated region Bcer98_0537 110 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 152973901 Common - transcription-repair coupling factor Bcer98_0048 236 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 152973977 Common - Adenylate kinase Bcer98_0125 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 152976045 Common - LrgA family protein Bcer98_2321 25 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 152974187 Common - carbamate kinase Bcer98_0351 66 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 152974904 Common - sulfatase Bcer98_1100 73 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 152976490 Pathogen - hypothetical protein Bcer98_2779 1 None None None 152975677 Common - ferredoxin Bcer98_1912 43 COG0633 Fdx, Ferredoxin Energy production and conversion 152976314 Pathogen - phage protein Bcer98_2602 1 None None None 152976526 Common - Carboxylesterase Bcer98_2815 62 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152975881 Common - lipolytic protein G-D-S-L family Bcer98_2141 35 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 152976668 Pathogen - hypothetical protein Bcer98_2960 1 None None None 152975794 Pathogen - hypothetical protein Bcer98_2045 1 None None None 152973961 Common - ribosomal protein L22 Bcer98_0109 230 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 152974092 Common - CoA-binding domain protein Bcer98_0248 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 152974731 Common - cell cycle protein Bcer98_0919 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 152975137 Pathogen - putative stage 0 sporulation regulatory protein Bcer98_1338 1 None None None 152977339 Common - Alpha/beta hydrolase fold-3 domain protein Bcer98_3664 129 COG0657 Aes, Esterase/lipase Lipid metabolism 152974696 Common - Cof-like hydrolase Bcer98_0883 121 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152977618 Common - LrgB family protein Bcer98_3956 83 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 152977673 Common - ribosomal protein S6 Bcer98_4014 206 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 152974815 Common - phosphoesterase PA-phosphatase related Bcer98_1011 73 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 152975487 Pathogen - hypothetical protein Bcer98_1705 1 None None None 152977253 Pathogen - hypothetical protein Bcer98_3574 1 None None None 152977361 Common - protein of unknown function DUF1657 Bcer98_3686 6 None None None 152976710 Common - hypothetical protein Bcer98_3005 2 None None None 152977372 Common - protein of unknown function UPF0052 and CofD Bcer98_3697 98 COG0391 COG0391, Uncharacterized conserved protein Function unknown 152977591 Common - carbon starvation protein CstA Bcer98_3929 107 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 152976353 Common - Protein of unknown function YugN-like protein Bcer98_2641 3 None None None 152975118 Pathogen - hypothetical protein Bcer98_1319 1 None None None 152974450 Common - K+-transporting ATPase, B subunit Bcer98_0625 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 152974998 Common - ResB family protein Bcer98_1198 49 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 152976461 Common - transcriptional antiterminator, BglG Bcer98_2750 30 COG3711 BglG, Transcriptional antiterminator Transcription 152974227 Common - protein tyrosine phosphatase Bcer98_0393 136 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 152974694 Common - hypothetical protein Bcer98_0881 2 None None None 152977265 Common - glycine cleavage system H protein Bcer98_3586 188 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 152977604 Common - hypothetical protein Bcer98_3942 6 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 152977309 Common - periplasmic solute binding protein Bcer98_3634 181 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 152975257 Common - peptidase M23B Bcer98_1462 19 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152975337 Pathogen - hypothetical protein Bcer98_1546 1 None None None 152976799 Common - aminodeoxychorismate lyase Bcer98_3097 187 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 152976882 Common - cytochrome c assembly protein Bcer98_3181 33 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 152975250 Common - major facilitator superfamily MFS_1 Bcer98_1455 202 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152973997 Common - hypothetical protein Bcer98_0145 2 None None None 152976351 Common - conserved hypothetical cytosolic protein Bcer98_2639 3 None None None 152977538 Common - ABC transporter-related protein Bcer98_3874 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152974234 Common - signal peptidase I Bcer98_0400 139 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 152975846 Common - transcriptional regulator, MarR family Bcer98_2105 74 COG1846 MarR, Transcriptional regulators Transcription 152974029 Common - transposase, IS605 OrfB family Bcer98_0182 74 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 152974886 Common - Abortive infection protein Bcer98_1082 56 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 152976995 Common - alanine dehydrogenase Bcer98_3299 168 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 152974967 Pathogen - ribosomal protein L5 domain protein Bcer98_1164 1 None None None 152974614 Common - protein of unknown function DUF214 Bcer98_0798 11 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 152974538 Common - S-layer domain protein Bcer98_0715 21 None None None 152976405 Common - metallophosphoesterase Bcer98_2693 110 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 152976975 Common - 2-methylcitrate synthase/citrate synthase II Bcer98_3278 194 COG0372 GltA, Citrate synthase Energy production and conversion 152977224 Common - protein of unknown function DUF523 Bcer98_3542 76 COG1683 COG1683, Uncharacterized conserved protein Function unknown 152975203 Common - hypothetical protein Bcer98_1404 3 None None None 152975057 Common - methylglyoxal synthase Bcer98_1257 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 152976927 Common - hypothetical protein Bcer98_3229 2 COG4200 COG4200, Uncharacterized protein conserved in bacteria Function unknown 152973987 Common - cobalt transport protein Bcer98_0135 71 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 152976887 Common - ATP-dependent Clp protease, ATP-binding subunit ClpX Bcer98_3186 228 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 152974432 Common - acriflavin resistance protein Bcer98_0606 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 152977393 Common - carboxyl-terminal protease Bcer98_3721 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 152975606 Common - hypothetical protein Bcer98_1836 2 None None None 152973873 Common - recombination protein RecR Bcer98_0020 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 152976216 Common - acyl carrier protein Bcer98_2502 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152976468 Common - chromosome segregation and condensation protein ScpA Bcer98_2757 152 COG1354 COG1354, Uncharacterized conserved protein Function unknown 152977311 Common - ABC transporter-related protein Bcer98_3636 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 152977681 Common - methyltransferase GidB Bcer98_4022 194 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 152975445 Common - hypothetical protein Bcer98_1658 2 None None None 152976633 Common - ComG operon protein 6 Bcer98_2924 2 COG4940 ComGF, Competence protein ComGF Intracellular trafficking and secretion 152977533 Pathogen - PapR family protein Bcer98_3868 1 None None None 152975819 Common - NAD-dependent epimerase/dehydratase Bcer98_2077 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152977665 Common - two component transcriptional regulator, winged helix family Bcer98_4006 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152977020 Common - putative GAF domain-containing protein Bcer98_3325 82 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 152976106 Common - RNA chaperone Hfq Bcer98_2390 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 152976455 Common - nitroreductase Bcer98_2744 79 COG0778 NfnB, Nitroreductase Energy production and conversion 152976429 Common - ABC transporter-related protein Bcer98_2717 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 152976943 Pathogen - hypothetical protein Bcer98_3246 1 None None None 152974658 Common - Abortive infection protein Bcer98_0845 29 None None None 152976324 Common - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Bcer98_2612 171 COG0756 Dut, dUTPase Nucleotide transport and metabolism 152977329 Common - phosphate-starvation-inducible E Bcer98_3654 19 COG3223 COG3223, Predicted membrane protein Function unknown 152977075 Pathogen - group-specific protein Bcer98_3385 1 None None None 152975169 Common - hypothetical protein Bcer98_1370 2 None None None 152976556 Common - ErfK/YbiS/YcfS/YnhG family protein Bcer98_2845 98 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 152974392 Common - putative transaldolase Bcer98_0565 158 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 152974302 Common - hypothetical protein Bcer98_0469 12 COG3537 COG3537, Putative alpha-1,2-mannosidase Carbohydrate transport and metabolism 152975782 Common - GCN5-related N-acetyltransferase Bcer98_2032 168 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152977658 Common - protein of unknown function DUF163 Bcer98_3999 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 152975001 Common - multi-sensor signal transduction histidine kinase Bcer98_1201 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 152974355 Common - protein of unknown function DUF21 Bcer98_0525 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 152975189 Pathogen - hypothetical protein Bcer98_1390 1 None None None 152976781 Common - DoxX family protein Bcer98_3079 7 COG2259 COG2259, Predicted membrane protein Function unknown 152975022 Common - isopentenyl-diphosphate delta-isomerase, type 2 Bcer98_1222 85 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 152976695 Pathogen - hypothetical protein Bcer98_2990 1 None None None 152977321 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_3646 185 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 152977029 Common - AMP-dependent synthetase and ligase Bcer98_3335 224 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 152976914 Common - succinate dehydrogenase and fumarate reductase iron-sulfur protein Bcer98_3215 207 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 152977649 Common - hypothetical protein Bcer98_3990 8 None None None 152975721 Common - resolvase Bcer98_1963 5 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152976097 Common - glutamine synthetase, type I Bcer98_2381 228 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 152974384 Common - transcriptional regulator, MarR family Bcer98_0557 122 COG1846 MarR, Transcriptional regulators Transcription 152973871 Common - DNA polymerase III, subunits gamma and tau Bcer98_0018 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 152974389 Common - ABC transporter-related protein Bcer98_0562 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 152974744 Common - Methyltransferase type 12 Bcer98_0934 96 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 152975199 Common - short-chain dehydrogenase/reductase SDR Bcer98_1400 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152974724 Common - adenylate cyclase Bcer98_0912 10 COG4116 COG4116, Uncharacterized protein conserved in bacteria Function unknown 152975586 Pathogen - hypothetical protein Bcer98_1809 1 None None None 152975317 Common - periplasmic solute binding protein Bcer98_1526 182 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 152977032 Common - histone deacetylase superfamily Bcer98_3338 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 152975728 Common - hypothetical protein Bcer98_1970 2 None None None 152977491 Common - ATP synthase F1, epsilon subunit Bcer98_3824 176 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 152975201 Common - putative D-alanyl-D-alanine carboxypeptidase Bcer98_1402 4 COG2367 PenP, Beta-lactamase class A Defense mechanisms 152977067 Common - Activator of Hsp90 ATPase 1 family protein Bcer98_3374 6 COG3832 COG3832, Uncharacterized conserved protein Function unknown 152977576 Common - hypothetical protein Bcer98_3914 2 None None None 152976241 Common - Fibronectin-binding A domain protein Bcer98_2527 90 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 152975540 Pathogen - hypothetical protein Bcer98_1762 1 None None None 152974483 Common - cotJA protein Bcer98_0658 2 None None None 152976644 Common - phage tail tape measure protein, TP901 family Bcer98_2935 39 COG5412 COG5412, Phage-related protein Function unknown 152977379 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Bcer98_3704 180 COG0546 Gph, Predicted phosphatases General function prediction only 152976944 Common - asparaginyl-tRNA synthetase Bcer98_3247 248 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 152977453 Common - protein of unknown function DUF214 Bcer98_3785 175 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 152977498 Common - ATP synthase F0, A subunit Bcer98_3831 162 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 152975140 Common - OmpA/MotB domain protein Bcer98_1341 148 COG1360 MotB, Flagellar motor protein Cell motility and secretion 152975746 Pathogen - conserved hypothetical proetin Bcer98_1994 1 None None None 152975699 Common - Mandelate racemase/muconate lactonizing protein Bcer98_1937 153 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 152974857 Common - transcriptional regulator, DeoR family Bcer98_1053 113 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 152974046 Common - DNA binding domain, excisionase family Bcer98_0201 70 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 152974928 Common - 3-isopropylmalate dehydrogenase Bcer98_1124 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 152975500 Pathogen - hypothetical protein Bcer98_1720 1 None None None 152974896 Common - D-alanine-activating enzyme Bcer98_1092 223 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 152975420 Common - GCN5-related N-acetyltransferase Bcer98_1633 32 COG0456 RimI, Acetyltransferases General function prediction only 152976501 Common - ferric uptake regulator, Fur family Bcer98_2790 205 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 152975427 Common - Dihydrofolate reductase Bcer98_1640 148 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 152976958 Common - translation initiation factor IF-3 Bcer98_3261 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 152974466 Common - spore germination protein Bcer98_0641 7 None None None 152976967 Common - Sporulation protein YtaF Bcer98_3270 15 COG1971 COG1971, Predicted membrane protein Function unknown 152974118 Common - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Bcer98_0277 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 152974779 Common - SSS sodium solute transporter superfamily Bcer98_0970 140 COG4147 DhlC, Predicted symporter General function prediction only 152974127 Common - DNA ligase, NAD-dependent Bcer98_0286 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 152975592 Common - metal dependent phosphohydrolase Bcer98_1816 36 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 152973887 Common - hydrolase, TatD family Bcer98_0034 240 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 152976786 Common - Cystathionine gamma-synthase Bcer98_3084 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 152974062 Pathogen - hypothetical protein Bcer98_0218 1 None None None 152974448 Pathogen - hypothetical protein Bcer98_0623 1 None None None 152975770 Common - hypothetical protein Bcer98_2019 2 None None None 152974662 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0849 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152976900 Common - phosphodiesterase, MJ0936 family Bcer98_3200 51 COG0622 COG0622, Predicted phosphoesterase General function prediction only 152974413 Common - sodium/hydrogen exchanger Bcer98_0587 222 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 152974126 Common - ATP-dependent DNA helicase PcrA Bcer98_0285 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 152974807 Common - transcriptional regulator, XRE family Bcer98_1003 67 COG1396 HipB, Predicted transcriptional regulators Transcription 152974648 Common - hypothetical protein Bcer98_0835 8 None None None 152975145 Pathogen - hypothetical protein Bcer98_1346 1 None None None 152975459 Pathogen - hypothetical protein Bcer98_1674 2 None None None 152975161 Common - ATPase, FliI/YscN family Bcer98_1362 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 152976625 Common - SNF2-related protein Bcer98_2916 196 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 152977410 Common - response regulator aspartate phosphatase Bcer98_3738 3 None None None 152977646 Common - protein of unknown function DUF909 Bcer98_3987 3 COG4842 COG4842, Uncharacterized protein conserved in bacteria Function unknown 152976874 Common - FolC bifunctional protein Bcer98_3173 218 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 152975992 Common - small acid-soluble spore O family protein Bcer98_2265 2 None None None 152974099 Common - two component transcriptional regulator, winged helix family Bcer98_0255 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152975436 Common - beta-lactamase domain protein Bcer98_1649 125 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 152976000 Common - AMP-dependent synthetase and ligase Bcer98_2273 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152977102 Common - hypothetical protein Bcer98_3412 8 COG4696 COG4696, Uncharacterized protein conserved in bacteria Function unknown 152973855 Common - chromosomal replication initiator protein DnaA Bcer98_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 152975326 Common - Spore coat protein CotH Bcer98_1535 19 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 152976840 Common - periplasmic binding protein Bcer98_3139 77 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 152974541 Common - membrane bound O-acyl transferase MBOAT family protein Bcer98_0718 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 152976007 Common - Integrase catalytic region Bcer98_2280 128 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975494 Common - phosphoesterase PA-phosphatase related Bcer98_1713 46 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 152976866 Common - Rod shape-determining protein MreD Bcer98_3165 9 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 152976436 Pathogen - hypothetical protein Bcer98_2724 1 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 152974518 Common - protein of unknown function DUF964 Bcer98_0695 17 COG3679 COG3679, Uncharacterized conserved protein Function unknown 152976916 Common - succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family Bcer98_3217 17 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 152975160 Common - hypothetical protein Bcer98_1361 2 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 152974424 Common - spore germination protein Bcer98_0598 10 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 152977175 Common - naphthoate synthase Bcer98_3491 179 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 152973970 Common - ribosomal protein S8 Bcer98_0118 248 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 152977468 Pathogen - hypothetical protein Bcer98_3800 1 None None None 152975935 Pathogen - hypothetical protein Bcer98_2207 1 None None None 152974682 Common - ornithine aminotransferase Bcer98_0869 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 152977282 Common - methyl-accepting chemotaxis sensory transducer Bcer98_3605 182 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152975482 Common - protein kinase Bcer98_1698 135 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 152975434 Common - hypothetical protein Bcer98_1647 2 None None None 152976005 Common - TPR repeat-containing protein Bcer98_2278 2 None None None 152975032 Common - Sporulation stage IV protein A Bcer98_1232 15 None None None 152975849 Common - short chain fatty acid transporter Bcer98_2108 41 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 152977201 Common - superoxide dismutase copper/zinc binding Bcer98_3518 87 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 152974429 Common - phosphate binding protein Bcer98_0603 130 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 152974877 Common - NrdI protein Bcer98_1073 39 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 152974883 Common - ABC transporter, permease Bcer98_1079 2 None None None 152977307 Pathogen - hypothetical protein Bcer98_3632 1 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 152974676 Common - spore germination protein PD Bcer98_0863 2 None None None 152976050 Pathogen - hypothetical protein Bcer98_2326 1 None None None 152976696 Common - putative glucokinase, ROK family Bcer98_2991 165 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 152977152 Common - cytochrome bd ubiquinol oxidase subunit I Bcer98_3464 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 152977111 Common - hypothetical protein Bcer98_3421 2 None None None 152975752 Common - ABC transporter-related protein Bcer98_2000 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 152975259 Common - Rhodanese domain protein Bcer98_1464 109 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 152977275 Common - 3-hydroxyacyl-CoA dehydrogenase NAD-binding Bcer98_3597 161 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 152975252 Common - alpha/beta hydrolase fold Bcer98_1457 79 COG2267 PldB, Lysophospholipase Lipid metabolism 152975278 Common - L-lactate dehydrogenase Bcer98_1484 172 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 152976200 Common - DNA protecting protein DprA Bcer98_2486 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 152975637 Common - Lysine exporter protein (LYSE/YGGA) Bcer98_1871 86 COG1279 COG1279, Lysine efflux permease General function prediction only 152977439 Common - response regulator receiver protein Bcer98_3770 2 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 152977145 Pathogen - hypothetical protein Bcer98_3457 1 None None None 152977440 Common - glycosyl transferase family 2 Bcer98_3771 170 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152975204 Common - transcriptional regulator, MarR family Bcer98_1405 27 COG1846 MarR, Transcriptional regulators Transcription 152977041 Common - GCN5-related N-acetyltransferase Bcer98_3348 119 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152976677 Common - helix-turn-helix domain protein Bcer98_2969 17 None None None 152974929 Common - 3-isopropylmalate dehydratase, large subunit Bcer98_1125 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 152975306 Pathogen - hypothetical protein Bcer98_1515 1 None None None 152974316 Common - hypothetical protein Bcer98_0483 3 None None None 152975657 Pathogen - hypothetical protein Bcer98_1891 1 None None None 152977419 Pathogen - CHRD domain containing protein Bcer98_3749 1 None None None 152974337 Common - protein of unknown function DUF1641 Bcer98_0506 11 COG2427 COG2427, Uncharacterized conserved protein Function unknown 152974762 Common - hypothetical protein Bcer98_0953 7 None None None 152975033 Common - histone family protein DNA-binding protein Bcer98_1233 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 152977607 Common - hypothetical protein Bcer98_3945 2 COG2456 COG2456, Uncharacterized conserved protein Function unknown 152975590 Common - integral membrane sensor signal transduction histidine kinase Bcer98_1814 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 152976568 Common - dihydrolipoamide dehydrogenase Bcer98_2857 240 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 152974946 Common - phosphoadenosine phosphosulfate reductase Bcer98_1143 164 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 152977328 Common - helix-turn-helix- domain containing protein AraC type Bcer98_3653 138 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 152975048 Common - cytochrome c class I Bcer98_1248 26 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 152975910 Pathogen - hypothetical protein Bcer98_2180 1 None None None 152975409 Common - sodium:neurotransmitter symporter Bcer98_1622 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 152976288 Common - cell divisionFtsK/SpoIIIE Bcer98_2576 160 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 152977559 Common - Protein of unknown function YwhD Bcer98_3897 4 None None None 152977337 Common - transcriptional regulator, TetR family Bcer98_3662 21 COG1309 AcrR, Transcriptional regulator Transcription 152974104 Common - ABC transporter-related protein Bcer98_0262 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152975377 Pathogen - hypothetical protein Bcer98_1589 1 None None None 152974278 Common - YvnB Bcer98_0445 1 None None None 152974416 Common - Cytochrome aa3 quinol oxidase subunit I Bcer98_0590 171 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 152977485 Common - NADH (or F420H2) dehydrogenase, subunit C Bcer98_3817 178 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 152975234 Common - major facilitator superfamily MFS_1 Bcer98_1437 131 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152974408 Common - branched-chain amino acid transport system II carrier protein Bcer98_0582 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 152976709 Common - protein of unknown function DUF1189 Bcer98_3004 3 None None None 152974021 Pathogen - hypothetical protein Bcer98_0173 1 None None None 152974244 Common - Delta-lactam-biosynthetic de-N-acetylase Bcer98_0410 108 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 152974599 Common - transcriptional antiterminator, BglG Bcer98_0783 29 COG3711 BglG, Transcriptional antiterminator Transcription 152975088 Common - hypothetical protein Bcer98_1288 2 None None None 152974409 Common - hypothetical protein Bcer98_0583 7 None None None 152976536 Common - ornithine carbamoyltransferase Bcer98_2825 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 152975319 Common - NAD-dependent epimerase/dehydratase Bcer98_1528 47 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 152977037 Common - conserved hypothetical cytosolic protein Bcer98_3344 10 None None None 152976198 Common - gid protein Bcer98_2484 194 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 152977445 Common - Non-specific serine/threonine protein kinase Bcer98_3777 142 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 152975525 Common - ABC transporter-related protein Bcer98_1746 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 152976747 Common - putative oxygen-independent coproporphyrinogen III oxidase Bcer98_3043 211 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 152975174 Common - flagellin domain protein Bcer98_1375 118 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 152976598 Common - hypothetical protein Bcer98_2888 6 None None None 152977479 Common - proton-translocating NADH-quinone oxidoreductase, chain L Bcer98_3811 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 152974277 Common - YvnB Bcer98_0444 4 None None None 152975907 Common - protein of unknown function DUF214 Bcer98_2177 57 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 152975783 Common - hypothetical protein Bcer98_2033 3 None None None 152976138 Common - tRNA-i(6)A37 thiotransferase enzyme MiaB Bcer98_2424 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 152975778 Common - CRISPR-associated protein Cas6 Bcer98_2028 7 COG1583 COG1583, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 152974793 Pathogen - hypothetical protein Bcer98_0988 1 None None None 152974391 Common - Monosaccharide-transporting ATPase Bcer98_0564 131 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 152976337 Common - prophage helix-turn-helix protein Bcer98_2625 2 None None None 152977526 Common - transcriptional regulator, TetR family Bcer98_3861 84 COG1309 AcrR, Transcriptional regulator Transcription 152974261 Common - beta-lactamase Bcer98_0428 144 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152974213 Common - major facilitator superfamily MFS_1 Bcer98_0377 123 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152976924 Common - AMP-dependent synthetase and ligase Bcer98_3226 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 152977234 Common - nucleotidyltransferase Bcer98_3552 5 None None None 152974373 Common - integral membrane sensor signal transduction histidine kinase Bcer98_0546 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 152974422 Common - Na+ symporter Bcer98_0596 125 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 152974326 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0495 169 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152976419 Common - conserved hypothetical cytosolic protein Bcer98_2707 2 None None None 152975242 Pathogen - acetolactate synthase, large subunit, biosynthetic type Bcer98_1445 1 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 152977598 Pathogen - hypothetical protein Bcer98_3936 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 152975221 Common - Non-specific serine/threonine protein kinase Bcer98_1424 132 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 152975007 Common - hypothetical protein Bcer98_1207 16 COG4955 COG4955, Uncharacterized protein conserved in bacteria Function unknown 152976129 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcer98_2413 12 None None None 152976873 Common - stage II sporulation protein B, putative Bcer98_3172 2 COG4649 COG4649, Uncharacterized protein conserved in bacteria Function unknown 152977503 Common - conserved hypothetical protein 1440 Bcer98_3836 16 COG4475 COG4475, Uncharacterized protein conserved in bacteria Function unknown 152974936 Common - imidazoleglycerol phosphate synthase, cyclase subunit Bcer98_1133 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 152975108 Common - hypothetical protein Bcer98_1309 2 None None None 152973946 Common - ribosomal protein L10 Bcer98_0093 216 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 152974195 Common - transport system permease protein Bcer98_0359 191 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 152975683 Pathogen - conserved hypothetical cytosolic protein Bcer98_1920 1 None None None 152975402 Common - single-strand binding protein Bcer98_1615 206 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 152977272 Common - hypothetical protein Bcer98_3593 4 None None None 152977298 Common - protein of unknown function DUF59 Bcer98_3621 135 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 152974269 Common - amidohydrolase Bcer98_0436 41 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 152974872 Common - hypothetical protein Bcer98_1068 4 COG4873 COG4873, Uncharacterized protein conserved in bacteria Function unknown 152975188 Common - bacteriocin-associated integral membrane protein Bcer98_1389 10 COG4652 COG4652, Uncharacterized protein conserved in bacteria Function unknown 152975510 Pathogen - methyl-accepting chemotaxis protein Bcer98_1730 1 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 152975925 Pathogen - hypothetical protein Bcer98_2197 1 None None None 152976387 Pathogen - hypothetical protein Bcer98_2675 1 None None None 152975129 Common - SSS sodium solute transporter superfamily Bcer98_1330 160 COG4147 DhlC, Predicted symporter General function prediction only 152975732 Common - hypothetical protein Bcer98_1976 3 None None None 152976146 Common - competence/damage-inducible protein CinA Bcer98_2432 213 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 152975320 Common - NADH:flavin oxidoreductase/NADH oxidase Bcer98_1529 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 152974493 Common - transcriptional regulator, RpiR family Bcer98_0668 121 COG1737 RpiR, Transcriptional regulators Transcription 152975605 Common - transcriptional regulator, TetR family Bcer98_1835 89 COG1309 AcrR, Transcriptional regulator Transcription 152975599 Common - alpha/beta hydrolase fold Bcer98_1827 100 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 152975567 Common - PTS system, lactose/cellobiose family IIC subunit Bcer98_1790 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 152976726 Common - protein of unknown function DUF188 Bcer98_3021 98 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 152977141 Common - conserved hypothetical protein, glutamic acid-rich region Bcer98_3453 20 COG4895 COG4895, Uncharacterized conserved protein Function unknown 152974288 Common - protein of unknown function DUF990 Bcer98_0455 27 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 152976966 Common - dephospho-CoA kinase Bcer98_3269 211 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 152977005 Common - acetate kinase Bcer98_3310 162 COG0282 ackA, Acetate kinase Energy production and conversion 152974331 Common - hypothetical protein Bcer98_0500 2 None None None 152977062 Common - pseudouridine synthase Bcer98_3369 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 152974743 Common - glycosyl transferase family 2 Bcer98_0933 104 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 152974806 Common - cell envelope-bound metalloprotease (camelysin) Bcer98_1002 2 None None None 152976083 Common - regulatory protein ArsR Bcer98_2360 4 COG4189 COG4189, Predicted transcriptional regulator Transcription 152976122 Common - ABC transporter-related protein Bcer98_2406 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 152976059 Common - hypothetical protein Bcer98_2335 1 None None None 152976377 Common - Protein-glutamine gamma-glutamyltransferase Bcer98_2665 3 None None None 152976751 Common - hypothetical protein Bcer98_3047 2 None None None 152977101 Pathogen - hypothetical protein Bcer98_3411 1 None None None 152974671 Common - signal peptidase I Bcer98_0858 203 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 152975094 Common - hypothetical protein Bcer98_1294 3 None None None 152976758 Common - Pyrroline-5-carboxylate reductase Bcer98_3054 118 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 152974146 Common - amino acid permease-associated region Bcer98_0305 192 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 152977550 Common - putative transcriptional regulator, MerR family Bcer98_3886 146 COG0789 SoxR, Predicted transcriptional regulators Transcription 152977053 Common - Propeptide PepSY amd peptidase M4 Bcer98_3360 8 COG5584 COG5584, Predicted small secreted protein Function unknown 152977138 Common - regulatory protein ArsR Bcer98_3450 87 COG0640 ArsR, Predicted transcriptional regulators Transcription 152974798 Common - phage integrase family protein Bcer98_0993 89 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 152974290 Common - Ion transport 2 domain protein Bcer98_0457 10 None None None 152975813 Common - nucleoside recognition domain protein Bcer98_2070 23 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 152974482 Common - spore coat-associated protein JB Bcer98_0657 9 None None None 152975000 Common - two component transcriptional regulator, winged helix family Bcer98_1200 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 152976983 Common - regulatory protein GntR HTH Bcer98_3286 124 COG2186 FadR, Transcriptional regulators Transcription 152977165 Pathogen - hypothetical protein Bcer98_3478 1 None None None 152976555 Pathogen - hypothetical protein Bcer98_2844 1 None None None 152976441 Common - hypothetical protein Bcer98_2730 4 None None None 152976528 Common - dethiobiotin synthase Bcer98_2817 162 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 152976997 Common - UspA domain protein Bcer98_3301 141 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 152974044 Common - molybdate ABC transporter, inner membrane subunit Bcer98_0199 235 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 152974973 Common - mannose-6-phosphate isomerase, class I Bcer98_1171 52 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 152976065 Common - 5'-Nucleotidase domain protein Bcer98_2341 133 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 152975260 Common - haemolytic enterotoxin Bcer98_1465 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152977434 Common - protein of unknown function DUF1232 Bcer98_3765 11 COG3339 COG3339, Uncharacterized conserved protein Function unknown 152974979 Common - protein of unknown function DUF47 Bcer98_1179 72 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 152975662 Common - Spore germination YpeB Bcer98_1896 14 None None None 152973909 Common - RNA binding S1 domain protein Bcer98_0056 236 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 152975411 Common - UBA/THIF-type NAD/FAD binding protein Bcer98_1624 221 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 152975860 Pathogen - hypothetical protein Bcer98_2120 1 None None None 152977415 Common - UDP-N-acetylglucosamine 2-epimerase Bcer98_3744 156 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 152975890 Common - UDP-glucose/GDP-mannose dehydrogenase Bcer98_2155 156 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 152975210 Common - transcriptional regulator, GntR family Bcer98_1411 128 COG1802 GntR, Transcriptional regulators Transcription 152974014 Common - Abortive infection protein Bcer98_0164 66 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 152974007 Common - peptidase U61 LD-carboxypeptidase A Bcer98_0157 54 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 152977193 Common - protein of unknown function DUF378 Bcer98_3510 22 COG2155 COG2155, Uncharacterized conserved protein Function unknown 152976600 Pathogen - hypothetical protein Bcer98_2890 1 None None None 152976646 Common - hypothetical protein Bcer98_2937 2 None None None 152976765 Common - Nitric-oxide synthase Bcer98_3061 24 COG1161 COG1161, Predicted GTPases General function prediction only 152974083 Common - putative transcriptional regulator, CopG family Bcer98_0239 13 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 152974829 Common - iron-sulfur cluster binding protein Bcer98_1025 95 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 152975619 Common - protein of unknown function DUF1696 Bcer98_1850 29 None None None 152975466 Common - hypothetical protein Bcer98_1681 12 None None None 152974075 Common - major facilitator superfamily MFS_1 Bcer98_0231 196 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 152974580 Common - putative PAS/PAC sensor protein Bcer98_0762 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 152974910 Common - NADH dehydrogenase (quinone) Bcer98_1106 196 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 152975066 Common - hypothetical protein Bcer98_1266 4 None None None 152974966 Pathogen - hypothetical protein Bcer98_1163 1 None None None 152974917 Pathogen - hypothetical protein Bcer98_1113 1 None None None 152974354 Common - cell envelope-related transcriptional attenuator Bcer98_0523 63 COG1316 LytR, Transcriptional regulator Transcription 152974225 Common - protein of unknown function DUF1128 Bcer98_0391 5 COG4840 COG4840, Uncharacterized protein conserved in bacteria Function unknown 152976237 Common - Guanylate kinase Bcer98_2523 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 152974348 Common - protein of unknown function DUF156 Bcer98_0517 69 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 152974758 Common - Ig domain protein group 2 domain protein Bcer98_0948 10 COG5492 COG5492, Bacterial surface proteins containing Ig-like domains Cell motility and secretion 152975541 Common - histone family protein DNA-binding protein Bcer98_1763 213 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 152977093 Pathogen - hypothetical protein Bcer98_3403 1 None None None 152976073 Common - hypothetical protein Bcer98_2349 4 None None None 152974457 Common - short-chain dehydrogenase/reductase SDR Bcer98_0632 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152974132 Common - ABC transporter-related protein Bcer98_0291 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 152976207 Common - tRNA (guanine-N1)-methyltransferase Bcer98_2493 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 152977549 Common - major facilitator superfamily MFS_1 Bcer98_3885 140 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 152977589 Common - phosphomethylpyrimidine kinase Bcer98_3927 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 152976892 Common - 4'-phosphopantetheinyl transferase Bcer98_3191 59 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 152977225 Common - conserved hypothetical protein 1655 Bcer98_3543 9 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 152974156 Common - Peroxiredoxin Bcer98_0315 218 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 152977161 Common - hypothetical protein Bcer98_3473 4 None None None 152976604 Common - hypothetical protein Bcer98_2894 3 None None None 152977451 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcer98_3783 5 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 152974506 Common - ABC transporter EcsB Bcer98_0682 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 152974474 Common - Na/Pi-cotransporter II-related protein Bcer98_0649 105 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 152975630 Pathogen - hypothetical protein Bcer98_1864 1 None None None 152975974 Common - DNA topoisomerase IV, B subunit Bcer98_2247 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 152976435 Pathogen - hypothetical protein Bcer98_2723 1 None None None 152977227 Common - Diaminopimelate epimerase Bcer98_3545 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 152975787 Common - NUDIX hydrolase Bcer98_2037 30 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 152976010 Common - hypothetical protein Bcer98_2283 2 None None None 152976619 Common - regulatory protein GntR HTH Bcer98_2910 134 COG1725 COG1725, Predicted transcriptional regulators Transcription 152977019 Common - transcriptional regulator, TetR family Bcer98_3324 104 COG1309 AcrR, Transcriptional regulator Transcription 152976131 Common - amino acid permease-associated region Bcer98_2416 166 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 152977510 Common - protein of unknown function DUF204 Bcer98_3845 67 COG1971 COG1971, Predicted membrane protein Function unknown 152974739 Pathogen - hypothetical protein Bcer98_0927 1 None None None 152976571 Common - Phosphate butyryltransferase Bcer98_2860 142 COG0280 Pta, Phosphotransacetylase Energy production and conversion 152975531 Pathogen - hypothetical protein Bcer98_1753 1 None None None 152976676 Common - hypothetical protein Bcer98_2968 4 None None None 152974955 Common - peptidase M23B Bcer98_1152 194 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 152975265 Common - cytidine deaminase Bcer98_1470 117 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 152976700 Common - Nucleotidyl transferase Bcer98_2995 238 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 152976453 Common - beta-lactamase Bcer98_2742 141 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 152975899 Pathogen - hypothetical protein Bcer98_2167 1 None None None 152975419 Common - hydrolase, HAD-superfamily, subfamily IIIA Bcer98_1632 124 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 152976852 Common - protein of unknown function DUF214 Bcer98_3151 17 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 152977216 Common - 3D domain protein Bcer98_3534 24 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 152976329 Common - RecT protein Bcer98_2617 27 COG3723 RecT, Recombinational DNA repair protein (RecE pathway) DNA replication, recombination, and repair 152977635 Common - Resolvase domain Bcer98_3976 128 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152976244 Common - orotidine 5'-phosphate decarboxylase Bcer98_2532 162 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 152975120 Common - ribonuclease H Bcer98_1321 45 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 152975838 Common - hypothetical protein Bcer98_2097 2 None None None 152976918 Common - excinuclease ABC, C subunit Bcer98_3219 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 152976485 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_2774 159 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152977575 Common - protein of unknown function DUF423 Bcer98_3913 73 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 152975850 Pathogen - hypothetical protein Bcer98_2109 1 None None None 152977556 Common - Cytotoxic domain protein Bcer98_3893 4 None None None 152973962 Common - ribosomal protein S3 Bcer98_0110 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 152974451 Common - potassium-transporting ATPase, C subunit Bcer98_0626 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 152977264 Common - TOPRIM domain protein Bcer98_3585 8 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 152974695 Common - hypothetical protein Bcer98_0882 2 None None None 152974663 Common - protein of unknown function DUF6 transmembrane Bcer98_0850 51 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 152977371 Common - protein of unknown function DUF199 Bcer98_3696 54 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 152975290 Common - threonine synthase Bcer98_1497 220 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 152975552 Common - aldo/keto reductase Bcer98_1775 207 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 152975740 Common - aminotransferase class I and II Bcer98_1987 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 152977664 Common - multi-sensor signal transduction histidine kinase Bcer98_4005 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 152975833 Common - conserved hypothetical cytosolic protein Bcer98_2092 3 None None None 152974852 Common - extracellular solute-binding protein family 1 Bcer98_1048 112 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 152977592 Common - two component transcriptional regulator, LytTR family Bcer98_3930 104 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 152976040 Common - protein of unknown function DUF1453 Bcer98_2316 6 COG4846 CcdC, Membrane protein involved in cytochrome C biogenesis Posttranslational modification, protein turnover, chaperones 152977427 Common - hypothetical protein Bcer98_3758 6 None None None 152976462 Common - Cof-like hydrolase Bcer98_2751 110 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152977056 Common - hypothetical protein Bcer98_3363 3 None None None 152977648 Pathogen - hypothetical protein Bcer98_3989 1 None None None 152974969 Common - peptidase M50 Bcer98_1166 69 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 152976352 Common - SCP-like extracellular Bcer98_2640 53 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 152977240 Common - putative transcriptional regulator Bcer98_3558 56 COG2345 COG2345, Predicted transcriptional regulator Transcription 152976972 Common - MaoC domain protein dehydratase Bcer98_3275 65 COG2030 MaoC, Acyl dehydratase Lipid metabolism 152975112 Common - glutathionylspermidine synthase Bcer98_1313 43 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 152977126 Common - Methionine adenosyltransferase Bcer98_3437 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 152974091 Common - ABC transporter-related protein Bcer98_0247 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 152975969 Common - extracellular solute-binding protein family 5 Bcer98_2242 192 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152976471 Common - peptidyl-prolyl cis-trans isomerase cyclophilin type Bcer98_2760 195 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 152974693 Common - protein of unknown function DUF161 Bcer98_0880 73 COG1284 COG1284, Uncharacterized conserved protein Function unknown 152975058 Common - LmbE family protein Bcer98_1258 69 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 152975716 Pathogen - hypothetical protein Bcer98_1957 1 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 152975380 Common - Methyltransferase type 11 Bcer98_1592 186 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 152976273 Common - stage V sporulation protein E Bcer98_2561 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 152974542 Common - hypothetical protein Bcer98_0719 9 None None None 152976350 Common - hypothetical protein Bcer98_2638 3 None None None 152976994 Common - hypothetical protein Bcer98_3298 3 None None None 152974369 Common - polar amino acid ABC transporter, inner membrane subunit Bcer98_0542 181 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 152976185 Common - prolyl-tRNA synthetase Bcer98_2471 247 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152977652 Pathogen - hypothetical protein Bcer98_3993 1 None None None 152977319 Pathogen - hypothetical protein Bcer98_3644 1 None None None 152977267 Pathogen - conserved hypothetical lipoprotein Bcer98_3588 1 None None None 152974235 Common - tetratricopeptide repeat family protein Bcer98_0401 3 None None None 152977308 Pathogen - hypothetical protein Bcer98_3633 1 None None None 152976502 Common - Sporulation stage II protein M Bcer98_2791 14 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 152976264 Common - RNA polymerase, sigma 28 subunit, FliA/WhiG family Bcer98_2552 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 152975336 Common - short-chain dehydrogenase/reductase SDR Bcer98_1545 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152976793 Common - hypothetical protein Bcer98_3091 1 None None None 152973922 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Bcer98_0069 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 152975829 Common - hypothetical protein Bcer98_2087 4 COG2155 COG2155, Uncharacterized conserved protein Function unknown 152974765 Pathogen - hypothetical protein Bcer98_0956 1 None None None 152973998 Common - Glycerate kinase Bcer98_0146 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 152974303 Common - RNA methyltransferase, TrmH family, group 2 Bcer98_0470 168 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 152974163 Common - ABC transporter-related protein Bcer98_0323 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 152975488 Common - putative methyltransferase Bcer98_1707 26 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 152974935 Common - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Bcer98_1132 215 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 152976365 Common - PhoH family protein Bcer98_2653 195 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 152976748 Common - transcriptional regulator, HxlR family Bcer98_3044 144 COG1733 COG1733, Predicted transcriptional regulators Transcription 152975517 Common - amino acid/peptide transporter Bcer98_1737 81 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 152973981 Common - ribosomal protein S13 Bcer98_0129 244 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 152977184 Common - glycogen/starch synthase, ADP-glucose type Bcer98_3501 154 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 152974775 Common - 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit Bcer98_0966 50 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 152975433 Common - Sec-independent protein translocase, TatC subunit Bcer98_1646 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 152976008 Common - putative transposase Bcer98_2281 2 None None None 152975233 Common - 4-phytase Bcer98_1436 192 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 152976161 Common - hypothetical protein Bcer98_2447 2 None None None 152976515 Common - GCN5-related N-acetyltransferase Bcer98_2804 8 COG0456 RimI, Acetyltransferases General function prediction only 152975516 Common - SMC domain protein Bcer98_1736 142 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 152975458 Common - ATPase associated with various cellular activities AAA_5 Bcer98_1673 38 COG0714 COG0714, MoxR-like ATPases General function prediction only 152975988 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bcer98_2261 177 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 152976348 Common - protein of unknown function DUF1333 Bcer98_2636 7 COG3679 COG3679, Uncharacterized conserved protein Function unknown 152975960 Common - acid phosphatase/vanadium-dependent haloperoxidase related Bcer98_2233 24 COG1963 COG1963, Uncharacterized protein conserved in bacteria Function unknown 152973954 Common - translation elongation factor Tu Bcer98_0102 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 152977546 Common - membrane protein PfoR Bcer98_3882 36 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 152975945 Common - VanW family protein Bcer98_2217 38 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 152976202 Common - succinyl-CoA synthetase, beta subunit Bcer98_2488 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 152974053 Common - nitrite reductase (NAD(P)H), large subunit Bcer98_0208 217 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 152975889 Common - hypothetical protein Bcer98_2154 4 None None None 152977133 Common - putative transposase Bcer98_3445 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975635 Pathogen - hypothetical protein Bcer98_1869 1 None None None 152977310 Common - ABC-3 protein Bcer98_3635 193 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 152973990 Common - ribosomal protein S9 Bcer98_0138 248 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 152973931 Common - protein of unknown function DUF147 Bcer98_0078 30 COG1623 COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) General function prediction only 152977683 Common - tRNA modification GTPase TrmE Bcer98_4024 228 COG0486 ThdF, Predicted GTPase General function prediction only 152975644 Common - hypothetical protein Bcer98_1878 11 None None None 152974170 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcer98_0331 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 152975117 Pathogen - hypothetical protein Bcer98_1318 1 None None None 152975723 Common - NAD+--asparagine ADP-ribosyltransferase-like protein Bcer98_1965 4 COG5585 COG5585, NAD+--asparagine ADP-ribosyltransferase Signal transduction mechanisms 152975468 Common - 3-oxoacid CoA-transferase, A subunit Bcer98_1683 95 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 152977182 Common - lipase class 3 Bcer98_3499 20 COG3675 COG3675, Predicted lipase Lipid metabolism 152975308 Pathogen - hypothetical protein Bcer98_1517 1 None None None 152975676 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcer98_1911 27 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 152976527 Common - 8-amino-7-oxononanoate synthase Bcer98_2816 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 152976815 Common - sortase family protein Bcer98_3113 20 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 152974550 Common - cell cycle protein Bcer98_0727 205 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 152974626 Common - Protein of unknown function DUF1878 Bcer98_0811 2 None None None 152976082 Pathogen - hypothetical protein Bcer98_2359 1 None None None 152974555 Common - membrane-flanked domain Bcer98_0732 5 COG3428 COG3428, Predicted membrane protein Function unknown 152974286 Common - glutamate-1-semialdehyde-2,1-aminomutase Bcer98_0453 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 152976978 Common - FxsA cytoplasmic membrane protein Bcer98_3281 78 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 152977519 Common - fructose-1,6-bisphosphatase, class II Bcer98_3854 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 152973947 Common - ribosomal protein L7/L12 Bcer98_0094 211 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 152976988 Common - phosphoesterase RecJ domain protein Bcer98_3291 83 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 152977250 Common - peptidase M23B Bcer98_3569 33 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 152974467 Common - spore germination B3 GerAC family protein Bcer98_0642 10 None None None 152974116 Common - phosphoribosylformylglycinamidine cyclo-ligase Bcer98_0275 231 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 152976764 Common - shikimate 5-dehydrogenase Bcer98_3060 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 152975882 Pathogen - hypothetical protein Bcer98_2142 1 None None None 152976025 Pathogen - hypothetical protein Bcer98_2301 1 None None None 152973964 Common - ribosomal protein L29 Bcer98_0112 177 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 152976389 Common - Cof-like hydrolase Bcer98_2677 131 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 152977199 Common - Domain of unknown function DUF1871 Bcer98_3516 2 None None None 152974135 Pathogen - hypothetical protein Bcer98_0294 1 None None None 152974890 Common - hypothetical protein Bcer98_1086 11 None None None 152974047 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase Bcer98_0202 152 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 152976650 Pathogen - hypothetical protein Bcer98_2941 1 None None None 152977190 Common - Ion transport 2 domain protein Bcer98_3507 121 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 152975793 Common - putative transcriptional regulator, GntR family Bcer98_2044 232 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 152973978 Common - methionine aminopeptidase, type I Bcer98_0126 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 152977599 Common - protein of unknown function UPF0126 Bcer98_3937 118 COG2860 COG2860, Predicted membrane protein Function unknown 152973894 Common - purine operon repressor, PurR Bcer98_0041 96 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 152976442 Common - putative translation initiation factor, aIF-2BI family Bcer98_2731 131 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 152974616 Common - transposase Bcer98_0800 5 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 152975671 Common - regulatory protein ArsR Bcer98_1906 42 COG4189 COG4189, Predicted transcriptional regulator Transcription 152977291 Common - SNARE associated Golgi protein Bcer98_3614 66 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 152974177 Common - FAD dependent oxidoreductase Bcer98_0341 98 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 152974443 Common - thiamine biosynthesis protein ThiS Bcer98_0618 40 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 152974816 Common - transporter Bcer98_1012 54 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 152973886 Common - methionyl-tRNA synthetase Bcer98_0033 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152974660 Pathogen - hypothetical protein Bcer98_0847 1 None None None 152975621 Pathogen - hypothetical protein Bcer98_1852 1 None None None 152974376 Common - sulphate transporter Bcer98_0549 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 152974128 Common - CamS sex pheromone cAM373 family protein Bcer98_0287 9 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 152976959 Common - threonyl-tRNA synthetase Bcer98_3262 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 152976628 Pathogen - hypothetical protein Bcer98_2919 1 None None None 152976719 Common - VrrA protein Bcer98_3014 3 None None None 152975442 Common - D-amino acid aminotransferase Bcer98_1655 190 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 152975698 Common - NLP/P60 protein Bcer98_1936 164 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 152975585 Common - AMP-dependent synthetase and ligase Bcer98_1808 216 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 152974613 Pathogen - hypothetical protein Bcer98_0797 1 None None None 152974947 Common - sulfate adenylyltransferase Bcer98_1144 64 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 152974647 Pathogen - hypothetical protein Bcer98_0834 1 None None None 152973969 Common - ribosomal protein S14 Bcer98_0117 195 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 152974961 Common - hypothetical protein Bcer98_1158 8 COG4758 COG4758, Predicted membrane protein Function unknown 152975991 Common - aconitate hydratase 1 Bcer98_2264 222 COG1048 AcnA, Aconitase A Energy production and conversion 152976497 Common - phosphopentomutase Bcer98_2786 71 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 152974117 Common - phosphoribosylglycinamide formyltransferase Bcer98_0276 228 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 152974445 Common - thiazole biosynthesis adenylyltransferase ThiF Bcer98_0620 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 152975773 Common - CRISPR-associated protein Cas4 Bcer98_2023 35 COG1468 COG1468, RecB family exonuclease DNA replication, recombination, and repair 152973913 Common - ATP-dependent metalloprotease FtsH Bcer98_0060 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 152976117 Common - hypothetical protein Bcer98_2401 5 None None None 152976953 Common - transcriptional regulator, TetR family Bcer98_3256 30 COG1309 AcrR, Transcriptional regulator Transcription 152974028 Common - hypothetical protein Bcer98_0181 2 None None None 152976785 Pathogen - conserved hypothetical membrane spanning protein Bcer98_3083 1 None None None 152977089 Common - nitrate reductase, alpha subunit Bcer98_3399 113 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 152976191 Common - uridylate kinase Bcer98_2477 244 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 152974861 Common - protein of unknown function DUF610 YibQ Bcer98_1057 65 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 152975156 Common - flagellar basal-body rod protein FlgC Bcer98_1357 124 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 152977021 Common - methionine gamma-lyase Bcer98_3326 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 152975581 Common - biotin/lipoyl attachment domain-containing protein Bcer98_1804 148 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 152974140 Common - glutamyl-tRNA(Gln) amidotransferase, B subunit Bcer98_0299 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 152975493 Common - protein of unknown function DUF421 Bcer98_1712 54 COG2323 COG2323, Predicted membrane protein Function unknown 152976865 Common - septum site-determining protein MinC Bcer98_3164 63 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 152977620 Common - two component transcriptional regulator, LytTR family Bcer98_3958 150 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 152973863 Common - Serine-type D-Ala-D-Ala carboxypeptidase Bcer98_0009 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 152974987 Common - purine nucleoside phosphorylase Bcer98_1187 100 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 152975196 Common - small acid-soluble spore H family protein Bcer98_1397 2 None None None 152974147 Common - succinic semialdehyde dehydrogenase Bcer98_0306 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 152977283 Common - transcriptional regulator, TrmB Bcer98_3606 21 COG1378 COG1378, Predicted transcriptional regulators Transcription 152976168 Common - Dipicolinic acid synthetase subunit B Bcer98_2454 18 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 152977565 Common - transport system permease protein Bcer98_3903 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 152976006 Pathogen - hypothetical protein Bcer98_2279 1 None None None 152975148 Common - hypothetical protein Bcer98_1349 3 COG1728 COG1728, Uncharacterized protein conserved in bacteria Function unknown 152974847 Common - acetoacetyl-CoA reductase Bcer98_1043 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 152975934 Common - GCN5-related N-acetyltransferase Bcer98_2206 90 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 152977467 Common - Sporulation stage III transcriptional regulator SpoIIID Bcer98_3799 15 None None None 152975435 Common - degV family protein Bcer98_1648 57 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 152977049 Common - protein of unknown function DUF84 Bcer98_3356 35 COG1986 COG1986, Uncharacterized conserved protein Function unknown 152975448 Common - transcriptional regulator, RpiR family Bcer98_1662 96 COG1737 RpiR, Transcriptional regulators Transcription 152976572 Common - sigma54 specific transcriptional regulator, Fis family Bcer98_2861 188 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 152974203 Common - methyl-accepting chemotaxis sensory transducer Bcer98_0367 153 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 152977096 Pathogen - hypothetical protein Bcer98_3406 1 None None None 152976469 Common - protein of unknown function DUF309 Bcer98_2758 5 COG1547 COG1547, Uncharacterized conserved protein Function unknown 152976888 Common - trigger factor Bcer98_3187 217 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 152975285 Common - 4'-phosphopantetheinyl transferase Bcer98_1491 62 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 152974650 Common - Alanine racemase Bcer98_0837 129 COG1609 PurR, Transcriptional regulators Transcription 152976406 Pathogen - hypothetical protein Bcer98_2694 1 None None None 152977674 Common - GTP-binding protein YchF Bcer98_4015 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 152975236 Common - polysaccharide biosynthesis protein Bcer98_1439 43 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 152976107 Common - tRNA delta(2)-isopentenylpyrophosphate transferase Bcer98_2391 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 152977532 Common - phospholipase D/Transphosphatidylase Bcer98_3867 146 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 152975505 Common - 2-methylcitrate dehydratase Bcer98_1725 57 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 152977359 Common - glutaredoxin 2 Bcer98_3684 6 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 152974517 Common - protein of unknown function DUF445 Bcer98_0694 23 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 152974637 Common - penicillin-binding protein, 1A family Bcer98_0823 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 152976215 Common - Ribonuclease III Bcer98_2501 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 152976317 Common - hypothetical protein Bcer98_2605 5 None None None 152976454 Common - diguanylate cyclase Bcer98_2743 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 152977396 Common - cytochrome c-551 Bcer98_3724 3 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 152976325 Pathogen - hypothetical protein Bcer98_2613 1 None None None 152977346 Common - YbaK/prolyl-tRNA synthetase associated region Bcer98_3671 47 COG2606 EbsC, Uncharacterized conserved protein Function unknown 152974338 Common - glycerophosphoryl diester phosphodiesterase Bcer98_0507 134 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 152976019 Common - mobilization protein Bcer98_2292 16 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 152974732 Common - short-chain dehydrogenase/reductase SDR Bcer98_0920 235 COG0623 FabI, Enoyl- acyl-carrier-protein 152974383 Common - glycerol-3-phosphate transporter Bcer98_0556 94 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 152974922 Common - protein of unknown function UPF0180 Bcer98_1118 7 None None None 152977490 Common - protein of unknown function DUF975 Bcer98_3823 11 COG5523 COG5523, Predicted integral membrane protein Function unknown 152977659 Common - hypothetical protein Bcer98_4000 2 None None None 152977076 Common - hypothetical protein Bcer98_3386 2 None None None 152977682 Common - glucose inhibited division protein A Bcer98_4023 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 152975295 Common - MgtC/SapB transporter Bcer98_1502 113 COG1285 SapB, Uncharacterized membrane protein Function unknown 152976509 Pathogen - hypothetical protein Bcer98_2798 1 None None None 152975021 Common - RNA binding S1 domain protein Bcer98_1221 236 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 152976936 Pathogen - hypothetical protein Bcer98_3239 1 None None None 152974712 Common - ABC transporter-related protein Bcer98_0900 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 152974725 Common - hypothetical protein Bcer98_0913 3 None None None 152975006 Common - ferredoxin Bcer98_1206 6 COG1141 Fer, Ferredoxin Energy production and conversion 152977070 Common - hypothetical protein Bcer98_3378 19 None None None 152977031 Common - CBS domain containing protein Bcer98_3337 109 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 152973872 Common - conserved hypothetical protein 103 Bcer98_0019 179 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 152976804 Common - protein of unknown function UPF0118 Bcer98_3102 173 COG0628 PerM, Predicted permease General function prediction only 152974878 Common - Ribonucleoside-diphosphate reductase Bcer98_1074 177 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 152977483 Common - NADH dehydrogenase (quinone) Bcer98_3815 191 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 152977010 Common - NAD(+) kinase Bcer98_3315 121 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 152974840 Common - Integral membrane protein TerC Bcer98_1036 102 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 152973870 Common - CMP/dCMP deaminase zinc-binding Bcer98_0017 215 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 152975720 Common - hypothetical protein Bcer98_1961 4 None None None 152977454 Common - ABC transporter-related protein Bcer98_3786 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 152975397 Common - cell wall hydrolase/autolysin Bcer98_1610 3 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 152976945 Common - phenylalanyl-tRNA synthetase, beta subunit Bcer98_3248 247 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 152976687 Pathogen - hypothetical protein Bcer98_2982 1 None None None 152977385 Common - excinuclease ABC, B subunit Bcer98_3710 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 152976661 Pathogen - hypothetical protein Bcer98_2952 1 None None None 152976931 Pathogen - hypothetical protein Bcer98_3234 1 None None None 152977038 Common - protein of unknown function DUF948 Bcer98_3345 6 COG4768 COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain General function prediction only 152977320 Common - hypothetical protein Bcer98_3645 2 COG2427 COG2427, Uncharacterized conserved protein Function unknown