Burkholderia vietnamiensis G4 chromosome 3, complete sequence NC_009254 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 134291847 Common - flavin reductase domain protein, FMN-binding Bcep1808_6464 79 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 134291912 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6529 132 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 134291806 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_6423 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134291686 Common - diheme cytochrome c Bcep1808_6300 20 None None None 134291919 Pathogen - hypothetical protein Bcep1808_6536 1 None None None 134291411 Common - NifZ family protein Bcep1808_6000 8 None None None 134291268 Common - diguanylate cyclase with PAS/PAC sensor Bcep1808_5852 187 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134291902 Common - glycosyl transferase, group 1 Bcep1808_6519 9 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291063 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_5639 68 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291857 Common - type II and III secretion system protein Bcep1808_6474 141 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 134291836 Common - Aldose 1-epimerase Bcep1808_6453 101 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 134291738 Common - UspA domain protein Bcep1808_6354 134 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134291494 Pathogen - hypothetical protein Bcep1808_6087 1 None None None 134290913 Common - hypothetical protein Bcep1808_5483 18 COG5527 COG5527, Protein involved in initiation of plasmid replication DNA replication, recombination, and repair 134291604 Pathogen - hypothetical protein Bcep1808_6212 1 None None None 134291274 Pathogen - hypothetical protein Bcep1808_5859 1 None None None 134291618 Common - Integrase, catalytic region Bcep1808_6227 54 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291377 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase Bcep1808_5966 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291037 Common - polysaccharide export protein Bcep1808_5613 80 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 134291044 Pathogen - hypothetical protein Bcep1808_5620 2 None None None 134290885 Common - Glycerone kinase Bcep1808_5455 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 134291947 Common - acetyl-CoA synthetase Bcep1808_6566 214 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 134291208 Common - conjugation TrbI family protein Bcep1808_5790 59 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 134291696 Common - hypothetical protein Bcep1808_6310 180 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 134291067 Common - Electron-transferring-flavoprotein dehydrogenase Bcep1808_5643 110 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 134291189 Common - ABC transporter related Bcep1808_5771 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 134291775 Common - transcriptional regulator, winged helix family Bcep1808_6392 77 COG3903 COG3903, Predicted ATPase General function prediction only 134291582 Common - putative transcriptional regulator, Crp/Fnr family Bcep1808_6185 142 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 134291880 Common - excinuclease ABC, A subunit Bcep1808_6497 238 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 134291802 Common - Extracellular ligand-binding receptor Bcep1808_6419 140 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 134291326 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcep1808_5912 106 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 134291841 Common - Alcohol dehydrogenase, zinc-binding domain protein Bcep1808_6458 197 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 134291609 Common - transcriptional modulator of MazE/toxin, MazF Bcep1808_6217 32 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 134291161 Pathogen - hypothetical protein Bcep1808_5738 1 None None None 134291132 Common - short chain dehydrogenase Bcep1808_5709 234 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 134291502 Common - binding-protein-dependent transport systems inner membrane component Bcep1808_6096 225 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 134290986 Common - transposase IS3/IS911 family protein Bcep1808_5562 38 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291968 Common - ABC-type branched-chain amino acid transport system periplasmic component Bcep1808_6587 106 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 134291473 Common - cytochrome bd ubiquinol oxidase, subunit I Bcep1808_6065 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 134291782 Common - transcriptional regulator, TetR family Bcep1808_6399 33 COG1309 AcrR, Transcriptional regulator Transcription 134291715 Common - Poly-beta-hydroxybutyrate polymerase domain protein Bcep1808_6329 75 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 134291781 Pathogen - hypothetical protein Bcep1808_6398 1 None None None 134291190 Common - ABC transporter related Bcep1808_5772 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 134291347 Common - hydrogenase-1 expression HyaE Bcep1808_5936 15 None None None 134290975 Common - diguanylate cyclase Bcep1808_5547 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 134291826 Common - major facilitator superfamily MFS_1 Bcep1808_6443 19 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291681 Common - cation diffusion facilitator family transporter Bcep1808_6295 200 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 134291639 Pathogen - hypothetical protein Bcep1808_6251 1 None None None 134291482 Common - hypothetical protein Bcep1808_6074 9 COG5654 COG5654, Uncharacterized conserved protein Function unknown 134291961 Common - hypothetical protein Bcep1808_6580 29 COG3391 COG3391, Uncharacterized conserved protein Function unknown 134291452 Pathogen - hypothetical protein Bcep1808_6042 1 None None None 134291895 Common - glycosyl transferase, group 1 Bcep1808_6512 214 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291702 Common - secretion protein HlyD family protein Bcep1808_6316 130 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134291427 Common - nitrogenase molybdenum-iron protein alpha chain Bcep1808_6016 52 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 134290948 Pathogen - hypothetical protein Bcep1808_5518 1 None None None 134291519 Common - TnpC Bcep1808_6115 4 None None None 134291365 Common - phospholipid/glycerol acyltransferase Bcep1808_5954 89 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 134291652 Common - aldehyde dehydrogenase Bcep1808_6266 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134291515 Common - protein of unknown function LppY and LpqO Bcep1808_6110 16 None None None 134291620 Common - hypothetical protein Bcep1808_6230 3 None None None 134291924 Pathogen - hypothetical protein Bcep1808_6543 1 None None None 134291243 Common - oxidoreductase FAD/NAD(P)-binding domain protein Bcep1808_5827 179 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 134291060 Common - integral membrane sensor signal transduction histidine kinase Bcep1808_5636 217 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 134291627 Common - putative transcriptional regulator Bcep1808_6237 14 COG2378 COG2378, Predicted transcriptional regulator Transcription 134291578 Common - transcriptional regulator, BadM/Rrf2 family Bcep1808_6181 92 COG1959 COG1959, Predicted transcriptional regulator Transcription 134291381 Common - excinuclease ATPase subunit Bcep1808_5970 14 COG0393 COG0393, Uncharacterized conserved protein Function unknown 134290953 Common - transposase and inactivated derivatives-like protein Bcep1808_5523 68 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291757 Common - alpha/beta hydrolase fold Bcep1808_6373 116 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 134291762 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcep1808_6379 24 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 134291982 Common - hypothetical protein Bcep1808_6602 3 None None None 134291566 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6169 52 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291480 Pathogen - hypothetical protein Bcep1808_6072 1 None None None 134291598 Common - transposase, IS4 family protein Bcep1808_6204 39 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 134291489 Common - transposase IS3/IS911 family protein Bcep1808_6082 26 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291996 Common - Lysine exporter protein (LYSE/YGGA) Bcep1808_6618 45 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 134291228 Common - glycogen branching enzyme Bcep1808_5812 142 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 134291799 Common - binding-protein-dependent transport systems inner membrane component Bcep1808_6416 173 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 134291674 Common - two component transcriptional regulator, winged helix family Bcep1808_6288 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291474 Pathogen - hypothetical protein Bcep1808_6066 1 None None None 134291913 Pathogen - hypothetical protein Bcep1808_6530 1 None None None 134291557 Common - cytochrome c, class I Bcep1808_6158 62 COG2863 COG2863, Cytochrome c553 Energy production and conversion 134291819 Common - hypothetical protein Bcep1808_6436 2 None None None 134291884 Common - cellulose synthase regulator protein Bcep1808_6501 21 None None None 134291148 Pathogen - hypothetical protein Bcep1808_5725 1 None None None 134291770 Common - transcriptional regulator, LysR family Bcep1808_6387 174 COG0583 LysR, Transcriptional regulator Transcription 134291994 Common - transcriptional regulator, LysR family Bcep1808_6616 175 COG0583 LysR, Transcriptional regulator Transcription 134291012 Common - alpha/beta hydrolase fold Bcep1808_5588 178 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 134291153 Pathogen - hypothetical protein Bcep1808_5730 1 None None None 134291708 Common - secretion protein HlyD family protein Bcep1808_6322 10 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134291137 Common - hypothetical protein Bcep1808_5714 5 None None None 134291528 Pathogen - hypothetical protein Bcep1808_6124 1 None None None 134291018 Common - porin, Gram-negative type Bcep1808_5594 30 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291072 Common - short chain dehydrogenase Bcep1808_5648 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 134291637 Common - putative transcriptional regulator Bcep1808_6249 18 COG2378 COG2378, Predicted transcriptional regulator Transcription 134291704 Common - ABC-2 type transporter Bcep1808_6318 110 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 134291875 Common - transcriptional regulator, LysR family Bcep1808_6492 161 COG0583 LysR, Transcriptional regulator Transcription 134291493 Common - phage integrase family protein Bcep1808_6086 169 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 134291178 Common - Orn/DAP/Arg decarboxylase 2 Bcep1808_5759 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 134291324 Common - protein of unknown function DUF1295 Bcep1808_5910 34 COG3752 COG3752, Predicted membrane protein Function unknown 134290934 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_5504 74 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291028 Common - major facilitator superfamily MFS_1 Bcep1808_5604 101 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 134291395 Common - electron transfer flavoprotein beta-subunit Bcep1808_5984 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 134291258 Common - cytochrome bd ubiquinol oxidase, subunit I Bcep1808_5842 164 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 134291295 Common - protein of unknown function DUF1275 Bcep1808_5881 27 COG3619 COG3619, Predicted membrane protein Function unknown 134291097 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Bcep1808_5674 209 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 134291661 Common - transcriptional regulator, LysR family Bcep1808_6275 188 COG0583 LysR, Transcriptional regulator Transcription 134291514 Common - hypothetical protein Bcep1808_6109 28 COG4275 COG4275, Uncharacterized conserved protein Function unknown 134291456 Common - Carbonate dehydratase Bcep1808_6047 156 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 134291733 Pathogen - hypothetical protein Bcep1808_6348 1 None None None 134291114 Common - transport-associated Bcep1808_5691 13 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291287 Common - drug resistance transporter, EmrB/QacA subfamily Bcep1808_5873 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291356 Common - hydrogenase expression/formation protein HypD Bcep1808_5945 109 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 134291404 Common - transcriptional regulator, NifA, Fis Family Bcep1808_5993 169 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 134291235 Common - MgtC/SapB transporter Bcep1808_5819 115 COG1285 SapB, Uncharacterized membrane protein Function unknown 134291305 Pathogen - hypothetical protein Bcep1808_5891 1 None None None 134291053 Common - protein of unknown function DUF330 Bcep1808_5629 10 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 134291434 Common - protein of unknown function DUF269 Bcep1808_6023 25 None None None 134291933 Common - periplasmic binding protein/LacI transcriptional regulator Bcep1808_6552 108 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 134291021 Common - aldehyde dehydrogenase Bcep1808_5597 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134291253 Common - Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein Bcep1808_5837 116 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 134291647 Common - Integrase, catalytic region Bcep1808_6260 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291261 Common - transport-associated Bcep1808_5845 6 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291386 Common - cytochrome B561 Bcep1808_5975 39 COG3658 COG3658, Cytochrome b Energy production and conversion 134291711 Common - beta-lactamase domain protein Bcep1808_6325 136 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 134291445 Common - hypothetical protein Bcep1808_6034 53 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 134291336 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_5922 67 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291740 Common - hypothetical protein Bcep1808_6356 57 COG2187 COG2187, Uncharacterized protein conserved in bacteria Function unknown 134291123 Common - glycosyl transferase, group 1 Bcep1808_5700 30 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291093 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_5670 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134290922 Common - hypothetical protein Bcep1808_5492 19 COG5642 COG5642, Uncharacterized conserved protein Function unknown 134290964 Common - protein of unknown function DUF125, transmembrane Bcep1808_5534 82 COG1814 COG1814, Uncharacterized membrane protein Function unknown 134290915 Common - Integrase, catalytic region Bcep1808_5485 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 134291602 Common - protein of unknown function DUF125, transmembrane Bcep1808_6209 81 COG1814 COG1814, Uncharacterized membrane protein Function unknown 134291855 Common - hypothetical protein Bcep1808_6472 10 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 134291862 Pathogen - Flp/Fap pilin component Bcep1808_6479 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 134291207 Common - Conjugal transfer protein TrbG/VirB9/CagX Bcep1808_5789 48 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 134290990 Pathogen - hypothetical protein Bcep1808_5566 1 None None None 134291354 Common - hydrogenase maturation protein HypF Bcep1808_5943 106 COG0068 HypF, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 134291988 Common - transcriptional regulator, TetR family Bcep1808_6608 81 COG1309 AcrR, Transcriptional regulator Transcription 134290898 Common - protein of unknown function DUF1656 Bcep1808_5468 11 None None None 134290997 Common - phenylalanine/histidine ammonia-lyase Bcep1808_5573 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 134291985 Common - LrgA family protein Bcep1808_6605 61 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 134291221 Pathogen - hypothetical protein Bcep1808_5803 1 None None None 134291945 Common - High potential iron-sulfur protein Bcep1808_6564 9 None None None 134291372 Common - thioesterase superfamily protein Bcep1808_5961 61 COG0824 FcbC, Predicted thioesterase General function prediction only 134291134 Common - hypothetical protein Bcep1808_5711 6 None None None 134291379 Common - beta-ketoacyl synthase Bcep1808_5968 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291299 Common - helix-turn-helix domain protein Bcep1808_5885 9 None None None 134291584 Common - Hemerythrin HHE cation binding domain protein Bcep1808_6187 9 COG3945 COG3945, Uncharacterized conserved protein Function unknown 134291843 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6460 108 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291370 Common - glycosyl transferase, family 2 Bcep1808_5959 125 COG4261 COG4261, Predicted acyltransferase General function prediction only 134291777 Common - transcriptional regulator, LysR family Bcep1808_6394 145 COG0583 LysR, Transcriptional regulator Transcription 134291586 Pathogen - hypothetical protein Bcep1808_6189 1 None None None 134291869 Common - integral membrane sensor signal transduction histidine kinase Bcep1808_6486 221 COG3300 COG3300, MHYT domain (predicted integral membrane sensor domain) Signal transduction mechanisms 134290904 Pathogen - hypothetical protein Bcep1808_5474 1 None None None 134291413 Common - aminotransferase, class V Bcep1808_6002 231 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 134290891 Common - Succinylglutamate desuccinylase/aspartoacylase Bcep1808_5461 46 COG3608 COG3608, Predicted deacylase General function prediction only 134291834 Common - xylose isomerase Bcep1808_6451 69 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 134291848 Common - protein involved in MetA-pathway of phenol degradation-like protein Bcep1808_6465 15 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 134290981 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_5554 138 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134291496 Common - high-affinity nickel-transporter Bcep1808_6089 31 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 134291262 Common - hypothetical protein Bcep1808_5846 4 COG2427 COG2427, Uncharacterized conserved protein Function unknown 134291163 Common - hypothetical protein Bcep1808_5740 2 None None None 134291285 Pathogen - hypothetical protein Bcep1808_5871 1 None None None 134291485 Common - transcriptional regulator, Fis family Bcep1808_6077 74 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291241 Common - Rieske (2Fe-2S) domain protein Bcep1808_5825 83 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 134291549 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_6150 10 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291625 Pathogen - hypothetical protein Bcep1808_6235 1 None None None 134291042 Common - glycosyl transferase, group 1 Bcep1808_5618 178 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291089 Common - two component transcriptional regulator, winged helix family Bcep1808_5665 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291085 Common - major facilitator superfamily MFS_1 Bcep1808_5661 153 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 134291599 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_6205 10 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291743 Pathogen - hypothetical protein Bcep1808_6359 1 None None None 134291926 Common - Integrase, catalytic region Bcep1808_6545 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 134291307 Pathogen - hypothetical protein Bcep1808_5893 1 None None None 134291658 Common - protein of unknown function DUF162 Bcep1808_6272 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 134291368 Common - hypothetical protein Bcep1808_5957 28 COG4648 COG4648, Predicted membrane protein Function unknown 134291882 Common - Phosphomannomutase Bcep1808_6499 238 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 134291576 Common - hypothetical protein Bcep1808_6179 2 None None None 134291215 Common - putative DNA relaxase/nickase, TraS/VirD2-like protein Bcep1808_5797 18 None None None 134291300 Common - nitric oxide dioxygenase Bcep1808_5886 139 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 134291318 Common - hypothetical protein Bcep1808_5904 19 None None None 134291537 Common - hypothetical protein Bcep1808_6134 5 None None None 134291568 Common - ABC transporter related Bcep1808_6171 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 134290936 Common - short-chain dehydrogenase/reductase SDR Bcep1808_5506 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291852 Common - response regulator receiver protein Bcep1808_6469 91 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 134291363 Pathogen - hypothetical protein Bcep1808_5952 1 None None None 134291616 Common - hypothetical protein Bcep1808_6224 6 None None None 134291111 Common - protein of unknown function DUF326 Bcep1808_5688 5 None None None 134291393 Common - FAD dependent oxidoreductase Bcep1808_5982 162 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 134291784 Pathogen - hypothetical protein Bcep1808_6401 1 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 134291415 Common - hypothetical protein Bcep1808_6004 3 None None None 134291710 Pathogen - hypothetical protein Bcep1808_6324 1 None None None 134290988 Common - transcriptional modulator of MazE/toxin, MazF Bcep1808_5564 55 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 134291345 Common - hydrogenase expression/formation protein Bcep1808_5934 79 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 134290977 Common - transposase IS116/IS110/IS902 family protein Bcep1808_5550 87 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291873 Common - aldo/keto reductase Bcep1808_6490 206 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 134291248 Common - cytochrome c oxidase, subunit I Bcep1808_5832 164 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 134291197 Pathogen - hypothetical protein Bcep1808_5779 1 None None None 134291192 Common - Amidase Bcep1808_5774 220 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 134291139 Common - natural resistance-associated macrophage protein Bcep1808_5716 72 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 134291931 Common - inner-membrane translocator Bcep1808_6550 112 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 134290946 Common - cytochrome c biogenesis protein, transmembrane region Bcep1808_5516 71 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 134291542 Common - transposase IS116/IS110/IS902 family protein Bcep1808_6142 87 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291425 Pathogen - hypothetical protein Bcep1808_6014 1 None None None 134291878 Common - hypothetical protein Bcep1808_6495 42 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 134291530 Common - Integrase, catalytic region Bcep1808_6126 61 None None None 134291893 Common - predicted glycosyl transferase Bcep1808_6510 100 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291211 Common - TRAG family protein Bcep1808_5793 62 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 134291979 Common - Pirin domain protein Bcep1808_6599 148 COG1741 COG1741, Pirin-related protein General function prediction only 134291772 Common - NADH:flavin oxidoreductase/NADH oxidase Bcep1808_6389 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 134291459 Common - hypothetical protein Bcep1808_6051 17 None None None 134291026 Common - dihydroxy-acid dehydratase Bcep1808_5602 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 134291332 Common - histidine kinase Bcep1808_5918 218 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 134291972 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6592 71 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134290955 Common - Integrase, catalytic region Bcep1808_5525 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291974 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_6594 10 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291165 Common - phosphatidylserine decarboxylase-related Bcep1808_5742 77 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 134291790 Common - GCN5-related N-acetyltransferase Bcep1808_6407 23 COG3153 COG3153, Predicted acetyltransferase General function prediction only 134291149 Pathogen - hypothetical protein Bcep1808_5726 1 None None None 134291544 Pathogen - hypothetical protein Bcep1808_6144 1 None None None 134291512 Common - chromate transporter, chromate ion transporter (CHR) family Bcep1808_6107 106 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 134291526 Common - nucleotide-binding protein containing TIR -like domain-like Bcep1808_6122 22 COG4271 COG4271, Predicted nucleotide-binding protein containing TIR -like domain Transcription 134291070 Common - Aldose 1-epimerase Bcep1808_5646 89 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 134291555 Common - cytochrome c oxidase, subunit II Bcep1808_6156 66 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 134291644 Common - hypothetical protein Bcep1808_6257 12 None None None 134291311 Common - putative transcriptional regulator, MerR family Bcep1808_5897 40 COG0789 SoxR, Predicted transcriptional regulators Transcription 134290970 Common - transposase IS66 Bcep1808_5541 59 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291886 Common - Cobyrinic acid a,c-diamide synthase Bcep1808_6503 63 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 134291954 Common - hypothetical protein Bcep1808_6573 5 COG1107 COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain DNA replication, recombination, and repair 134291035 Common - protein tyrosine phosphatase Bcep1808_5611 45 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 134291107 Pathogen - hypothetical protein Bcep1808_5684 1 None None None 134291001 Common - hypothetical protein Bcep1808_5577 55 COG3665 COG3665, Uncharacterized conserved protein Function unknown 134291684 Common - multi-sensor signal transduction histidine kinase Bcep1808_6298 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291898 Pathogen - hypothetical protein Bcep1808_6515 1 None None None 134291596 Common - diguanylate cyclase Bcep1808_6202 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134291535 Common - PHP C-terminal domain protein Bcep1808_6132 142 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 134291033 Common - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Bcep1808_5609 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 134291436 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein Bcep1808_6025 39 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 134291006 Pathogen - hypothetical protein Bcep1808_5582 1 None None None 134290902 Common - protein of unknown function DUF6, transmembrane Bcep1808_5472 27 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 134291447 Pathogen - hypothetical protein Bcep1808_6036 1 None None None 134291509 Common - chromate transporter, chromate ion transporter (CHR) family Bcep1808_6104 115 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 134291276 Common - (Acyl-carrier-protein) phosphodiesterase Bcep1808_5861 95 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 134291236 Pathogen - hypothetical protein Bcep1808_5820 1 None None None 134291051 Common - Paraquat-inducible protein A Bcep1808_5627 54 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 134291941 Common - TonB-dependent receptor Bcep1808_6560 93 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 134291334 Common - response regulator receiver protein Bcep1808_5920 174 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 134291758 Common - major facilitator superfamily MFS_1 Bcep1808_6374 170 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291058 Pathogen - hypothetical protein Bcep1808_5634 1 None None None 134290909 Common - Zn-dependent hydrolase of the beta-lactamase fold-like protein Bcep1808_5479 95 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 134291121 Common - glycosyl transferase, family 2 Bcep1808_5698 75 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 134291384 Common - Rubrerythrin Bcep1808_5973 79 COG1592 COG1592, Rubrerythrin Energy production and conversion 134291091 Common - multi-sensor hybrid histidine kinase Bcep1808_5667 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134291462 Common - GCN5-related N-acetyltransferase Bcep1808_6054 19 COG0456 RimI, Acetyltransferases General function prediction only 134291980 Common - flavoprotein WrbA Bcep1808_6600 122 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 134290924 Common - phage integrase family protein Bcep1808_5494 16 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 134291450 Pathogen - hypothetical protein Bcep1808_6040 1 None None None 134291328 Common - Carbonate dehydratase Bcep1808_5914 154 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 134291908 Common - protein tyrosine phosphatase Bcep1808_6525 50 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 134291104 Common - permease for cytosine/purines, uracil, thiamine, allantoin Bcep1808_5681 27 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 134291808 Common - haloacid dehalogenase, type II Bcep1808_6425 43 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 134291406 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein Bcep1808_5995 98 COG4231 COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Energy production and conversion 134291297 Common - hypothetical protein Bcep1808_5883 16 None None None 134291935 Common - pyrroloquinoline quinone biosynthesis protein PqqE Bcep1808_6554 145 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 134291706 Common - protein of unknown function DUF214 Bcep1808_6320 44 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 134291943 Common - Pyrrolo-quinoline quinone Bcep1808_6562 83 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 134291171 Common - putative autoinducer synthesis protein Bcep1808_5752 10 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 134291223 Common - histidine kinase Bcep1808_5807 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134291539 Common - transposase, IS4 family protein Bcep1808_6138 19 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 134291218 Pathogen - hypothetical protein Bcep1808_5800 1 None None None 134291423 Common - hypothetical protein Bcep1808_6012 5 None None None 134291788 Common - heavy metal sensor signal transduction histidine kinase Bcep1808_6405 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134291247 Pathogen - hypothetical protein Bcep1808_5831 1 None None None 134291194 Common - porin, Gram-negative type Bcep1808_5776 24 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291634 Common - transposase, IS4 family protein Bcep1808_6244 45 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 134291991 Pathogen - hypothetical protein Bcep1808_6611 1 None None None 134291657 Common - protein of unknown function DUF162 Bcep1808_6271 22 COG1556 COG1556, Uncharacterized conserved protein Function unknown 134291685 Common - cytochrome B561 Bcep1808_6299 49 COG3658 COG3658, Cytochrome b Energy production and conversion 134290983 Common - hypothetical protein Bcep1808_5559 11 None None None 134291290 Pathogen - hypothetical protein Bcep1808_5876 1 None None None 134291041 Common - glycosyl transferase, family 2 Bcep1808_5617 107 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 134291811 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Bcep1808_6428 126 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 134291785 Common - acriflavin resistance protein Bcep1808_6402 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 134291823 Common - aldo/keto reductase Bcep1808_6440 160 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 134291964 Common - ABC transporter related Bcep1808_6583 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 134291027 Common - regulatory protein, LacI Bcep1808_5603 126 COG1609 PurR, Transcriptional regulators Transcription 134291367 Common - acyl carrier protein Bcep1808_5956 34 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291344 Common - Ni/Fe-hydrogenase, b-type cytochrome subunit Bcep1808_5933 55 COG1969 HyaC, Ni,Fe-hydrogenase I cytochrome b subunit Energy production and conversion 134291362 Pathogen - hypothetical protein Bcep1808_5951 1 None None None 134291048 Common - hypothetical protein Bcep1808_5624 18 COG5642 COG5642, Uncharacterized conserved protein Function unknown 134291460 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bcep1808_6052 114 COG0388 COG0388, Predicted amidohydrolase General function prediction only 134290969 Common - IS66 Orf2 family protein Bcep1808_5540 52 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291747 Common - cyclic nucleotide-binding protein Bcep1808_6363 28 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 134291205 Common - type IV secretion system family protein Bcep1808_5787 19 None None None 134291342 Common - hydrogenase (NiFe) small subunit HydA Bcep1808_5931 77 COG1740 HyaA, Ni,Fe-hydrogenase I small subunit Energy production and conversion 134291547 Common - Integrase, catalytic region Bcep1808_6147 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 134291352 Common - hydrogenase expression/synthesis, HypA Bcep1808_5941 48 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 134291142 Common - transcriptional regulator, LysR family Bcep1808_5719 193 COG0583 LysR, Transcriptional regulator Transcription 134291624 Common - exodeoxyribonuclease V, gamma subunit Bcep1808_6234 65 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 134291928 Common - response regulator receiver protein Bcep1808_6547 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291136 Common - hypothetical protein Bcep1808_5713 31 COG3652 COG3652, Predicted outer membrane protein Function unknown 134291751 Common - YadA C-terminal domain protein Bcep1808_6367 46 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 134291082 Common - nitrate reductase molybdenum cofactor assembly chaperone Bcep1808_5658 54 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 134291469 Pathogen - hypothetical protein Bcep1808_6061 1 None None None 134291210 Pathogen - hypothetical protein Bcep1808_5792 1 None None None 134291734 Common - transport-associated Bcep1808_6350 35 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291614 Pathogen - hypothetical protein Bcep1808_6222 1 None None None 134291859 Common - AAA ATPase Bcep1808_6476 27 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 134291915 Pathogen - hypothetical protein Bcep1808_6532 1 None None None 134291832 Common - D-xylose ABC transporter, periplasmic substrate-binding protein Bcep1808_6449 105 COG4213 XylF, ABC-type xylose transport system, periplasmic component Carbohydrate transport and metabolism 134291643 Pathogen - hypothetical protein Bcep1808_6256 1 None None None 134291983 Pathogen - hypothetical protein Bcep1808_6603 1 None None None 134291619 Common - Silent information regulator protein Sir2 Bcep1808_6229 77 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 134291809 Pathogen - hypothetical protein Bcep1808_6426 1 None None None 134291199 Common - hypothetical protein Bcep1808_5781 9 None None None 134290958 Pathogen - hypothetical protein Bcep1808_5528 1 None None None 134291608 Common - transcriptional regulator/antitoxin, MazE Bcep1808_6216 12 COG2336 MazE, Growth regulator Signal transduction mechanisms 134291264 Common - putative short-chain dehydrogenase/reductase SDR Bcep1808_5848 23 None None None 134291103 Common - transcriptional regulator, LysR family Bcep1808_5680 191 COG0583 LysR, Transcriptional regulator Transcription 134290894 Common - threonine dehydratase Bcep1808_5464 212 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 134291407 Common - iron-sulfur cluster assembly accessory protein Bcep1808_5996 126 COG0316 IscA, Uncharacterized conserved protein Function unknown 134291695 Common - PfkB domain protein Bcep1808_6309 153 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 134290943 Common - dihydropyrimidinase Bcep1808_5513 197 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 134291936 Common - coenzyme PQQ synthesis D Bcep1808_6555 14 None None None 134290992 Common - hypothetical protein Bcep1808_5568 13 COG4804 COG4804, Uncharacterized conserved protein Function unknown 134291499 Common - transposase Tn3 family protein Bcep1808_6093 50 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 134291778 Common - hypothetical protein Bcep1808_6395 20 None None None 134291166 Pathogen - hypothetical protein Bcep1808_5744 1 None None None 134290901 Common - TOBE domain protein Bcep1808_5471 61 COG3585 MopI, Molybdopterin-binding protein Coenzyme metabolism 134291532 Common - hypothetical protein Bcep1808_6128 2 None None None 134291476 Common - nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein Bcep1808_6068 134 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 134291842 Common - NnrS family protein Bcep1808_6459 54 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 134291850 Common - type II secretion system protein Bcep1808_6467 79 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 134291672 Common - extracellular solute-binding protein, family 3 Bcep1808_6286 161 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 134291588 Common - transposase, mutator type Bcep1808_6192 61 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291254 Common - hypothetical protein Bcep1808_5838 4 None None None 134290887 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_5457 145 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134291938 Common - pyrroloquinoline quinone biosynthesis protein PqqB Bcep1808_6557 45 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 134291430 Common - hypothetical protein Bcep1808_6019 3 None None None 134290979 Pathogen - hypothetical protein Bcep1808_5552 1 None None None 134291173 Common - response regulator receiver protein Bcep1808_5754 66 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 134291839 Common - Autoinducer-binding domain protein Bcep1808_6456 60 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 134291391 Common - ferredoxin, 2Fe-2S Bcep1808_5980 68 COG3411 COG3411, Ferredoxin Energy production and conversion 134291665 Common - Ethyl tert-butyl ether degradation EthD Bcep1808_6279 3 None None None 134291795 Common - protein of unknown function DUF861, cupin_3 Bcep1808_6412 10 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 134291278 Common - short-chain dehydrogenase/reductase SDR Bcep1808_5863 138 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291668 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_6282 152 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134291118 Common - histidinol-phosphate phosphatase family protein Bcep1808_5695 123 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 134291128 Common - multi-sensor hybrid histidine kinase Bcep1808_5705 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134291180 Common - 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein Bcep1808_5761 6 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 134291891 Common - UTP-glucose-1-phosphate uridylyltransferase GalU Bcep1808_6508 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 134291486 Common - type I secretion membrane fusion protein, HlyD family Bcep1808_6078 138 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134291439 Pathogen - hypothetical protein Bcep1808_6028 1 None None None 134291523 Common - GCN5-related N-acetyltransferase Bcep1808_6119 45 COG3153 COG3153, Predicted acetyltransferase General function prediction only 134291076 Common - hypothetical protein Bcep1808_5652 3 None None None 134291507 Common - hypothetical protein Bcep1808_6102 3 None None None 134291224 Common - malto-oligosyltrehalose synthase Bcep1808_5808 102 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 134291008 Common - short-chain dehydrogenase/reductase SDR Bcep1808_5584 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291720 Common - UspA domain protein Bcep1808_6334 116 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134291449 Common - GCN5-related N-acetyltransferase Bcep1808_6038 42 COG2153 ElaA, Predicted acyltransferase General function prediction only 134291183 Common - acyl-CoA dehydrogenase domain protein Bcep1808_5764 139 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 134290926 Pathogen - hypothetical protein Bcep1808_5496 1 None None None 134291309 Common - Deoxyribodipyrimidine photo-lyase Bcep1808_5895 141 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 134291025 Common - hypothetical protein Bcep1808_5601 35 COG3970 COG3970, Fumarylacetoacetate (FAA) hydrolase family protein General function prediction only 134291056 Pathogen - hypothetical protein Bcep1808_5632 1 None None None 134291409 Common - LRV FeS4 cluster domain protein Bcep1808_5998 14 None None None 134291239 Common - sugar efflux transporter Bcep1808_5823 154 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291792 Common - Betaine-aldehyde dehydrogenase Bcep1808_6409 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134291271 Common - amidohydrolase Bcep1808_5855 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 134291302 Common - CBS domain containing protein Bcep1808_5888 157 COG0517 COG0517, FOG: CBS domain General function prediction only 134291101 Common - protein of unknown function DUF1028 Bcep1808_5678 39 COG3342 COG3342, Uncharacterized conserved protein Function unknown 134290930 Pathogen - hypothetical protein Bcep1808_5500 1 COG2410 COG2410, Uncharacterized conserved protein Function unknown 134291744 Pathogen - hypothetical protein Bcep1808_6360 1 None None None 134290939 Common - allantoate amidohydrolase Bcep1808_5509 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 134291888 Pathogen - hypothetical protein Bcep1808_6505 3 None None None 134291562 Pathogen - hypothetical protein Bcep1808_6165 1 None None None 134291640 Pathogen - hypothetical protein Bcep1808_6252 1 None None None 134291559 Common - transposase IS116/IS110/IS902 family protein Bcep1808_6162 87 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291144 Common - extracellular solute-binding protein, family 1 Bcep1808_5721 24 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 134291723 Common - two component transcriptional regulator, LuxR family Bcep1808_6337 197 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 134291860 Common - peptidase A24A, prepilin type IV Bcep1808_6477 3 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 134291470 Pathogen - hypothetical protein Bcep1808_6062 1 None None None 134291670 Common - polar amino acid ABC transporter, inner membrane subunit Bcep1808_6284 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 134290908 Common - transcriptional regulator, TetR family Bcep1808_5478 99 COG1309 AcrR, Transcriptional regulator Transcription 134291650 Common - transposase IS116/IS110/IS902 family protein Bcep1808_6264 21 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291313 Common - FAD dependent oxidoreductase Bcep1808_5899 34 COG3380 COG3380, Predicted NAD/FAD-dependent oxidoreductase General function prediction only 134291540 Common - transposase IS3/IS911 family protein Bcep1808_6139 11 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291168 Common - transposase, IS4 family protein Bcep1808_5748 68 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291282 Common - TnpC protein Bcep1808_5868 58 None None None 134291727 Common - cytochrome c, class I Bcep1808_6341 25 COG4654 COG4654, Cytochrome c551/c552 Energy production and conversion 134290999 Common - ABC transport system substrate-binding protein Bcep1808_5575 72 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 134291031 Common - tricarballylate dehydrogenase Bcep1808_5607 56 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 134291769 Common - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Bcep1808_6386 107 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 134291814 Common - Succinate-semialdehyde dehydrogenase (NAD(P)(+)) Bcep1808_6431 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134291571 Common - hypothetical protein Bcep1808_6174 21 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 134291479 Common - PIN domain family protein Bcep1808_6071 8 COG1848 COG1848, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 134291330 Pathogen - hypothetical protein Bcep1808_5916 1 None None None 134290985 Common - Integrase, catalytic region Bcep1808_5561 79 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291373 Common - conserved hypothetical signal peptide protein Bcep1808_5962 20 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 134291321 Common - amine oxidase Bcep1808_5907 67 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 134291956 Pathogen - hypothetical protein Bcep1808_6575 1 None None None 134291679 Common - heavy metal translocating P-type ATPase Bcep1808_6293 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 134291043 Common - glycosyl transferase, family 2 Bcep1808_5619 128 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 134291079 Pathogen - hypothetical protein Bcep1808_5655 1 None None None 134291970 Common - Betaine-aldehyde dehydrogenase Bcep1808_6589 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134291977 Common - hypothetical protein Bcep1808_6597 16 COG4461 LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein Function unknown 134291014 Common - NIPSNAP family containing protein Bcep1808_5590 18 None None None 134291150 Pathogen - hypothetical protein Bcep1808_5727 1 None None None 134291591 Common - diguanylate cyclase Bcep1808_6196 24 None None None 134291157 Common - Ku domain protein Bcep1808_5734 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 134291359 Common - NADH ubiquinone oxidoreductase, 20 kDa subunit Bcep1808_5948 77 COG1740 HyaA, Ni,Fe-hydrogenase I small subunit Energy production and conversion 134291654 Common - Alpha/beta hydrolase fold-3 domain protein Bcep1808_6268 111 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 134291081 Common - nitrate reductase, beta subunit Bcep1808_5657 145 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 134291360 Common - nickel-dependent hydrogenase, large subunit Bcep1808_5949 97 COG0374 HyaB, Ni,Fe-hydrogenase I large subunit Energy production and conversion 134291046 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_5622 13 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291749 Common - Signal transduction histidine kinase-like protein Bcep1808_6365 53 COG4564 COG4564, Signal transduction histidine kinase Signal transduction mechanisms 134291490 Common - peptidase M10A and M12B, matrixin and adamalysin Bcep1808_6083 10 COG5549 COG5549, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 134291242 Common - 2-chlorobenzoate 1,2-dioxygenase Bcep1808_5826 26 COG5517 COG5517, Small subunit of phenylpropionate dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 134291622 Common - exodeoxyribonuclease V, alpha subunit Bcep1808_6232 125 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 134291545 Pathogen - transport-associated Bcep1808_6145 1 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291518 Pathogen - hypothetical protein Bcep1808_6114 1 None None None 134291419 Common - putative regulatory protein, FmdB family Bcep1808_6008 13 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 134291421 Common - Ankyrin Bcep1808_6010 80 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 134291052 Common - Mammalian cell entry related domain protein Bcep1808_5628 59 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 134291629 Common - GTP-binding protein, HSR1-related Bcep1808_6239 45 COG0486 ThdF, Predicted GTPase General function prediction only 134291100 Common - Endoribonuclease L-PSP Bcep1808_5677 128 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 134291003 Common - Amidase Bcep1808_5579 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 134291196 Common - phage transcriptional regulator, AlpA Bcep1808_5778 39 COG3311 AlpA, Predicted transcriptional regulator Transcription 134291753 Common - transcriptional regulator, LysR family Bcep1808_6369 95 COG0583 LysR, Transcriptional regulator Transcription 134291800 Common - binding-protein-dependent transport systems inner membrane component Bcep1808_6417 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 134291818 Common - protein of unknown function DUF72 Bcep1808_6435 92 COG1801 COG1801, Uncharacterized conserved protein Function unknown 134291292 Common - alkylphosphonate utilization operon protein PhnA Bcep1808_5878 106 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 134291683 Common - hypothetical protein Bcep1808_6297 7 None None None 134291216 Pathogen - hypothetical protein Bcep1808_5798 1 None None None 134291038 Common - lipopolysaccharide biosynthesis Bcep1808_5614 141 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 134291349 Common - Rubredoxin-type Fe(Cys)4 protein Bcep1808_5938 79 COG1773 COG1773, Rubredoxin Energy production and conversion 134291534 Common - Integrase, catalytic region Bcep1808_6130 141 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291921 Common - porin, Gram-negative type Bcep1808_6538 35 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291304 Common - PAS/PAC sensor hybrid histidine kinase Bcep1808_5890 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134290951 Pathogen - hypothetical protein Bcep1808_5521 1 None None None 134290962 Pathogen - hypothetical protein Bcep1808_5532 1 None None None 134290960 Pathogen - hypothetical protein Bcep1808_5530 1 None None None 134291086 Common - TfoX, N-terminal domain protein Bcep1808_5662 11 COG3070 TfoX, Regulator of competence-specific genes Transcription 134291821 Common - NmrA family protein Bcep1808_6438 87 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 134291828 Common - two component, sigma54 specific, transcriptional regulator, Fis family Bcep1808_6445 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 134291877 Common - hypothetical protein Bcep1808_6494 3 None None None 134291966 Common - inner-membrane translocator Bcep1808_6585 150 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 134291440 Pathogen - hypothetical protein Bcep1808_6029 1 None None None 134291429 Common - hypothetical protein Bcep1808_6018 6 None None None 134291866 Common - glycosyl transferase, family 2 Bcep1808_6483 195 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 134290994 Common - polar amino acid ABC transporter, inner membrane subunit Bcep1808_5570 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 134291339 Common - transcriptional regulator, LysR family Bcep1808_5925 158 COG0583 LysR, Transcriptional regulator Transcription 134291340 Common - Carbamoyltransferase Bcep1808_5929 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 134291400 Common - Fe-S protein assembly chaperone HscA Bcep1808_5989 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 134291069 Common - 3-hydroxybutyryl-CoA dehydrogenase Bcep1808_5645 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 134291350 Common - HupJ, contains rubredoxin domain Bcep1808_5939 15 None None None 134291904 Common - polysaccharide biosynthesis protein Bcep1808_6521 60 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 134290889 Common - Succinate-semialdehyde dehydrogenase (NAD(P)(+)) Bcep1808_5459 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134290911 Common - Cobyrinic acid a,c-diamide synthase Bcep1808_5481 204 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 134291804 Pathogen - hypothetical protein Bcep1808_6421 1 None None None 134291245 Common - Endoribonuclease L-PSP Bcep1808_5829 156 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 134290918 Common - Adenylosuccinate synthase Bcep1808_5488 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 134291688 Common - hypothetical protein Bcep1808_6302 2 None None None 134291736 Common - heat shock protein Hsp20 Bcep1808_6352 140 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 134291717 Pathogen - hypothetical protein Bcep1808_6331 1 None None None 134291065 Common pntA NAD(P) transhydrogenase subunit alpha Bcep1808_5641 164 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 134291266 Common - transcriptional regulator, LysR family Bcep1808_5850 120 COG0583 LysR, Transcriptional regulator Transcription 134291187 Common - inner-membrane translocator Bcep1808_5769 151 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 134291830 Common - inner-membrane translocator Bcep1808_6447 121 COG4214 XylH, ABC-type xylose transport system, permease component Carbohydrate transport and metabolism 134291632 Common - hypothetical protein Bcep1808_6242 29 COG1159 Era, GTPase General function prediction only 134291845 Common - short chain dehydrogenase Bcep1808_6462 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291958 Common - alpha/beta hydrolase fold Bcep1808_6577 100 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 134290896 Common - transcriptional regulator, MarR family Bcep1808_5466 65 COG1846 MarR, Transcriptional regulators Transcription 134291606 Common - diguanylate cyclase Bcep1808_6214 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134291693 Common - hypothetical protein Bcep1808_6307 19 COG1306 COG1306, Uncharacterized conserved protein Function unknown 134291323 Common - Methyltransferase type 11 Bcep1808_5909 97 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 134291466 Common - FAD dependent oxidoreductase Bcep1808_6058 76 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 134291417 Common - hypothetical protein Bcep1808_6006 18 None None None 134291388 Common - integral membrane sensor signal transduction histidine kinase Bcep1808_5977 215 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134290928 Common - hypothetical protein Bcep1808_5498 46 COG4717 COG4717, Uncharacterized conserved protein Function unknown 134291185 Pathogen - hypothetical protein Bcep1808_5767 1 None None None 134291881 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_6498 10 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291754 Common - DoxX family protein Bcep1808_6370 6 COG2259 COG2259, Predicted membrane protein Function unknown 134291402 Common - iron-sulfur cluster assembly accessory protein Bcep1808_5991 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 134291505 Common - cytochrome c assembly protein Bcep1808_6100 189 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 134291010 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Bcep1808_5586 11 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 134291016 Common - regulatory proteins, IclR Bcep1808_5592 79 COG1414 IclR, Transcriptional regulator Transcription 134291202 Common - type IV secretory pathway, VirB3 family protein Bcep1808_5784 9 COG3702 VirB3, Type IV secretory pathway, VirB3 components Intracellular trafficking and secretion 134290941 Common - dihydropyrimidine dehydrogenase Bcep1808_5511 140 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 134291764 Common - protein of unknown function DUF485 Bcep1808_6381 21 COG3162 COG3162, Predicted membrane protein Function unknown 134291152 Common - RNA polymerase factor sigma-54 Bcep1808_5729 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 134291230 Common - alpha amylase, catalytic region Bcep1808_5814 93 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 134291337 Common - 2-dehydropantoate 2-reductase Bcep1808_5923 55 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 134291074 Common - hypothetical protein Bcep1808_5650 9 None None None 134291023 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_5599 46 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 134291256 Common - glucose-methanol-choline oxidoreductase Bcep1808_5840 98 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 134291159 Common - sodium/hydrogen exchanger Bcep1808_5736 23 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 134291663 Pathogen - hypothetical protein Bcep1808_6277 1 None None None 134291432 Common - nitrogenase molybdenum-iron cofactor biosynthesis protein NifN Bcep1808_6021 48 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 134291504 Common - metallophosphoesterase Bcep1808_6099 45 COG1409 Icc, Predicted phosphohydrolases General function prediction only 134290972 Common - Integrase, catalytic region Bcep1808_5544 107 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291454 Common - transposase and inactivated derivatives-like protein Bcep1808_6045 68 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291175 Pathogen - 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein Bcep1808_5756 3 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 134291666 Common - transcriptional regulator, LysR family Bcep1808_6280 145 COG0583 LysR, Transcriptional regulator Transcription 134291951 Common - TRAP dicarboxylate transporter, DctM subunit Bcep1808_6570 136 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 134291251 Common - glycoside hydrolase 15-related Bcep1808_5835 73 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 134291797 Common - FAD dependent oxidoreductase Bcep1808_6414 127 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 134291472 Common - cytochrome d ubiquinol oxidase, subunit II Bcep1808_6064 149 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 134290906 Pathogen - hypothetical protein Bcep1808_5476 1 None None None 134291442 Common - molybdenum ABC transporter, periplasmic molybdate-binding protein Bcep1808_6031 156 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 134291713 Common - hypothetical protein Bcep1808_6327 4 None None None 134291054 Common - alkylhydroperoxidase like protein, AhpD family Bcep1808_5630 52 COG2128 COG2128, Uncharacterized conserved protein Function unknown 134291005 Common - ABC transporter related Bcep1808_5581 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 134291521 Pathogen - hypothetical protein Bcep1808_6117 1 None None None 134291638 Common - transposase, IS4 family protein Bcep1808_6250 68 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291677 Common - Hemerythrin HHE cation binding domain protein Bcep1808_6291 14 COG3945 COG3945, Uncharacterized conserved protein Function unknown 134291767 Common - cytochrome c, class I Bcep1808_6384 54 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 134291896 Pathogen - hypothetical protein Bcep1808_6513 1 None None None 134291649 Common - hypothetical protein Bcep1808_6262 21 None None None 134291145 Common - metabolite/H+ symporter, major facilitator superfamily (MFS) Bcep1808_5722 134 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291375 Common - 3-oxoacyl-(acyl carrier protein) synthase I Bcep1808_5964 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291816 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_6433 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134291975 Common - dTDP-4-dehydrorhamnose reductase Bcep1808_6595 169 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 134290932 Common - hypothetical protein Bcep1808_5502 10 None None None 134291552 Common - cytochrome c4, putative Bcep1808_6153 56 COG2863 COG2863, Cytochrome c553 Energy production and conversion 134291273 Pathogen - hypothetical protein Bcep1808_5858 1 None None None 134291226 Common - malto-oligosyltrehalose trehalohydrolase Bcep1808_5810 160 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 134291564 Pathogen - hypothetical protein Bcep1808_6167 1 None None None 134291918 Common - Integrase, catalytic region Bcep1808_6535 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 134291721 Common - UspA domain protein Bcep1808_6335 43 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134291550 Pathogen - hypothetical protein Bcep1808_6151 1 None None None 134291998 Common - transcriptional regulator, LysR family Bcep1808_6620 171 COG0583 LysR, Transcriptional regulator Transcription 134291233 Common - phospholipase D/Transphosphatidylase Bcep1808_5817 100 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 134291516 Common - hypothetical protein Bcep1808_6112 2 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 134291911 Common - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Bcep1808_6528 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 134291126 Common - glycosyl transferase, family 2 Bcep1808_5703 40 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 134291520 Common - transposase Tn3 family protein Bcep1808_6116 53 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 134291315 Common - GTP cyclohydrolase I Bcep1808_5901 175 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 134291690 Common - hypothetical protein Bcep1808_6304 11 None None None 134291280 Common - diguanylate cyclase with PAS/PAC sensor Bcep1808_5866 192 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 134291725 Common - Alcohol dehydrogenase GroES domain protein Bcep1808_6339 205 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 134291229 Common - trehalose synthase Bcep1808_5813 170 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 134290976 Common - Integrase, catalytic region Bcep1808_5548 80 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291232 Common - Endonuclease/exonuclease/phosphatase Bcep1808_5816 79 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 134291444 Common - transcriptional regulator, ModE family Bcep1808_6033 84 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 134291923 Pathogen - hypothetical protein Bcep1808_6542 1 None None None 134290929 Common - metal dependent phosphohydrolase Bcep1808_5499 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 134291306 Common - short-chain dehydrogenase/reductase SDR Bcep1808_5892 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291765 Common - SSS sodium solute transporter superfamily Bcep1808_6382 159 COG4147 DhlC, Predicted symporter General function prediction only 134290947 Common - methionine-R-sulfoxide reductase Bcep1808_5517 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 134291565 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6168 68 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291481 Common - hypothetical protein Bcep1808_6073 15 None None None 134291597 Common - two component transcriptional regulator, LuxR family Bcep1808_6203 178 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 134291327 Common - Lipocalin family protein Bcep1808_5913 74 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 134291556 Common - cytochrome c oxidase, subunit I Bcep1808_6157 173 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 134291907 Common - exopolysaccharide transport protein family Bcep1808_6524 184 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 134291260 Common - hypothetical protein Bcep1808_5844 16 None None None 134291953 Common - TRAP dicarboxylate transporter, DctP subunit Bcep1808_6572 114 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 134291443 Common - ABC transporter related Bcep1808_6032 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 134291703 Common - ABC transporter related Bcep1808_6317 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 134290912 Common - parB-like partition protein Bcep1808_5482 167 COG1475 Spo0J, Predicted transcriptional regulators Transcription 134291636 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6246 36 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 134291930 Common - inner membrane ABC transporter permease protein YjfF Bcep1808_6549 111 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 134291527 Common - phage integrase family protein Bcep1808_6123 129 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 134291973 Common - major facilitator superfamily MFS_1 Bcep1808_6593 137 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291503 Common - extracellular solute-binding protein, family 1 Bcep1808_6097 31 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 134291036 Pathogen - hypothetical protein Bcep1808_5612 1 None None None 134291310 Common - Alpha/beta hydrolase fold-3 domain protein Bcep1808_5896 87 COG0657 Aes, Esterase/lipase Lipid metabolism 134290905 Common - ProQ activator of osmoprotectant transporter ProP Bcep1808_5475 13 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 134291993 Common - hypothetical protein Bcep1808_6615 5 None None None 134291707 Common - ABC transporter related Bcep1808_6321 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 134291154 Pathogen - protein of unknown function DUF1328 Bcep1808_5731 1 None None None 134291771 Common - major facilitator superfamily MFS_1 Bcep1808_6388 70 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291971 Common - hypothetical protein Bcep1808_6590 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 134291403 Common - scaffold protein Bcep1808_5992 147 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 134291020 Common - hypothetical protein Bcep1808_5596 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 134291124 Common - sigma54 specific transcriptional regulator, Fis family Bcep1808_5701 173 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 134291712 Common - hypothetical protein Bcep1808_6326 6 None None None 134291798 Common - ABC transporter related Bcep1808_6415 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 134291250 Common - short chain dehydrogenase Bcep1808_5834 224 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 134291162 Common - intracellular protease, PfpI family Bcep1808_5739 167 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 134291463 Common - AIR synthase related protein domain protein Bcep1808_6055 64 COG2144 COG2144, Selenophosphate synthetase-related proteins General function prediction only 134291129 Common - NAD-dependent epimerase/dehydratase Bcep1808_5706 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 134291398 Common - homocitrate synthase Bcep1808_5987 205 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 134291610 Common - hypothetical protein Bcep1808_6218 2 None None None 134291115 Common - response regulator receiver protein Bcep1808_5692 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 134291660 Common - D-lactate dehydrogenase Bcep1808_6274 67 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 134290921 Pathogen - hypothetical protein Bcep1808_5491 1 None None None 134291099 Common - flavin-containing monooxygenase FMO Bcep1808_5676 63 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 134291603 Pathogen - transport-associated Bcep1808_6210 1 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291177 Common - acyl-CoA dehydrogenase domain protein Bcep1808_5758 15 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 134291325 Common - hypothetical protein Bcep1808_5911 34 COG5343 COG5343, Uncharacterized protein conserved in bacteria Function unknown 134291096 Common - transcriptional regulator, LysR family Bcep1808_5673 80 COG0583 LysR, Transcriptional regulator Transcription 134291259 Common - cytochrome d ubiquinol oxidase, subunit II Bcep1808_5843 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 134291017 Common - porin, Gram-negative type Bcep1808_5593 20 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291092 Common - response regulator receiver sensor signal transduction histidine kinase Bcep1808_5668 224 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 134291631 Pathogen - hypothetical protein Bcep1808_6241 1 None None None 134291457 Pathogen - hypothetical protein Bcep1808_6048 1 None None None 134291151 Pathogen - hypothetical protein Bcep1808_5728 1 None None None 134291864 Common - hypothetical protein Bcep1808_6481 9 None None None 134291385 Common - hypothetical protein Bcep1808_5974 17 COG5591 COG5591, Uncharacterized conserved protein Function unknown 134291011 Common - protein of unknown function DUF1185 Bcep1808_5587 23 None None None 134291741 Common - putative signal-transduction protein with CBS domains Bcep1808_6357 102 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 134291492 Common - hypothetical protein Bcep1808_6085 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 134291286 Common - secretion protein HlyD family protein Bcep1808_5872 106 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134291435 Common - protein of unknown function DUF683 Bcep1808_6024 16 COG5420 COG5420, Uncharacterized conserved small protein containing a coiled-coil domain Function unknown 134291294 Common - CopG domain protein DNA-binding domain protein Bcep1808_5880 9 None None None 134291050 Common - transposase, IS4 family protein Bcep1808_5626 46 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291906 Common - GDP-mannose 4,6-dehydratase Bcep1808_6523 224 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 134291140 Common - phage SPO1 DNA polymerase-related protein Bcep1808_5717 151 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 134290996 Common - ABC transporter related Bcep1808_5572 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 134291047 Common - regulatory proteins, IclR Bcep1808_5623 81 COG1414 IclR, Transcriptional regulator Transcription 134291803 Common - D-amino-acid dehydrogenase Bcep1808_6420 123 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 134291837 Common - major facilitator superfamily MFS_1 Bcep1808_6454 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134290914 Pathogen - hypothetical protein Bcep1808_5484 1 None None None 134291275 Common - transcriptional regulator, HxlR family Bcep1808_5860 149 COG1733 COG1733, Predicted transcriptional regulators Transcription 134291844 Common - Carboxymethylenebutenolidase Bcep1808_6461 106 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 134291856 Common - hypothetical protein Bcep1808_6473 5 None None None 134291901 Common - putative colanic acid biosynthesis acetyltransferase WcaF Bcep1808_6518 88 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 134291410 Common - NifZ family protein Bcep1808_5999 26 None None None 134291730 Common - sulphate transporter Bcep1808_6344 150 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 134291288 Common - RND efflux system, outer membrane lipoprotein, NodT family Bcep1808_5874 126 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291646 Common - transposase IS3/IS911 family protein Bcep1808_6259 32 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 134291355 Common - hydrogenase assembly chaperone hypC/hupF Bcep1808_5944 99 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 134291687 Common - cytochrome c, monohaem Bcep1808_6301 13 None None None 134291922 Common - hypothetical protein Bcep1808_6540 3 None None None 134291699 Common - transport-associated Bcep1808_6313 18 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291948 Common - porin, Gram-negative type Bcep1808_6567 20 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291774 Common - Amidohydrolase 3 Bcep1808_6391 96 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 134291883 Common - cellulose synthase operon C domain protein Bcep1808_6500 56 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 134291209 Common - type II secretion system protein E Bcep1808_5791 159 COG0630 VirB11, Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis Cell motility and secretion / Intracellular trafficking and secretion 134291581 Common - hypothetical protein Bcep1808_6184 12 COG4309 COG4309, Uncharacterized conserved protein Function unknown 134291612 Pathogen - hypothetical protein Bcep1808_6220 1 None None None 134291739 Pathogen - hypothetical protein Bcep1808_6355 1 None None None 134291716 Common - acetoacetyl-CoA reductase Bcep1808_6330 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291214 Common - plasmid-related protein Bcep1808_5796 5 None None None 134291269 Common - Integrase, catalytic region Bcep1808_5853 117 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 134290886 Common - General substrate transporter Bcep1808_5456 130 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 134291495 Common - transposase Tn3 family protein Bcep1808_6088 51 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 134291451 Common - DNA-binding transcriptional regulator CynR Bcep1808_6041 191 COG0583 LysR, Transcriptional regulator Transcription 134291989 Common - ABC transporter related Bcep1808_6609 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 134291062 Common - AMP-dependent synthetase and ligase Bcep1808_5638 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291617 Common - IstB domain protein ATP-binding protein Bcep1808_6226 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 134291200 Common - Lytic transglycosylase, catalytic Bcep1808_5782 25 None None None 134290980 Common - diguanylate phosphodiesterase Bcep1808_5553 50 COG3434 COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains Signal transduction mechanisms 134291066 Common - acyl-CoA dehydrogenase domain protein Bcep1808_5642 152 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 134291872 Common - extracellular solute-binding protein, family 3 Bcep1808_6489 26 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 134291560 Common - hypothetical protein Bcep1808_6163 3 None None None 134291827 Common - hypothetical protein Bcep1808_6444 7 None None None 134291426 Common nifH nitrogenase reductase Bcep1808_6015 72 COG1348 NifH, Nitrogenase subunit NifH (ATPase) Inorganic ion transport and metabolism 134291319 Common - Cyclopropane-fatty-acyl-phospholipid synthase Bcep1808_5905 132 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 134291570 Common - RND efflux system, outer membrane lipoprotein, NodT family Bcep1808_6173 104 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291453 Pathogen - hypothetical protein Bcep1808_6043 1 None None None 134291198 Pathogen - hypothetical protein Bcep1808_5780 1 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 134290974 Common - two component transcriptional regulator, LuxR family Bcep1808_5546 178 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 134290949 Common - phage integrase family protein Bcep1808_5519 60 COG0582 XerC, Integrase DNA replication, recombination, and repair 134291112 Common - PAS/PAC sensor hybrid histidine kinase Bcep1808_5689 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 134291501 Common - hypothetical protein Bcep1808_6095 4 None None None 134290987 Common - transcriptional regulator/antitoxin, MazE Bcep1808_5563 5 COG2336 MazE, Growth regulator Signal transduction mechanisms 134291820 Common - transcriptional regulator, LysR family Bcep1808_6437 155 COG0583 LysR, Transcriptional regulator Transcription 134291084 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Bcep1808_5660 93 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 134291780 Common - protein of unknown function DUF1275 Bcep1808_6397 17 COG3619 COG3619, Predicted membrane protein Function unknown 134291138 Common - transcriptional regulator, XRE family Bcep1808_5715 5 None None None 134291464 Common - glycosyl transferase, group 1 Bcep1808_6056 195 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291348 Common - HupH hydrogenase expression protein Bcep1808_5937 21 None None None 134291308 Common - hypothetical protein Bcep1808_5894 6 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 134291885 Common - Cellulose synthase (UDP-forming) Bcep1808_6502 120 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 134291756 Pathogen - hypothetical protein Bcep1808_6372 1 None None None 134291382 Common - Methyltransferase type 11 Bcep1808_5971 129 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 134291763 Common - hypothetical protein Bcep1808_6380 62 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 134291894 Common - UDP-glucose 6-dehydrogenase Bcep1808_6511 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 134291577 Common - phage integrase family protein Bcep1808_6180 190 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 134291653 Common - glucose-methanol-choline oxidoreductase Bcep1808_6267 89 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 134291807 Common - methyl-accepting chemotaxis sensory transducer Bcep1808_6424 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 134291364 Common - hypothetical protein Bcep1808_5953 29 None None None 134291240 Common - catechol 1,2-dioxygenase Bcep1808_5824 48 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 134290952 Pathogen - hypothetical protein Bcep1808_5522 1 None None None 134291186 Pathogen - hypothetical protein Bcep1808_5768 1 None None None 134291369 Common - AMP-dependent synthetase and ligase Bcep1808_5958 43 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 134291628 Pathogen - hypothetical protein Bcep1808_6238 1 None None None 134291705 Pathogen - hypothetical protein Bcep1808_6319 1 None None None 134291675 Pathogen - cytochrome b562 Bcep1808_6289 2 COG3783 CybC, Soluble cytochrome b562 Energy production and conversion 134291669 Common - ABC transporter related Bcep1808_6283 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 134291013 Common - monooxygenase, FAD-binding Bcep1808_5589 99 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 134290956 Pathogen - hypothetical protein Bcep1808_5526 1 None None None 134291887 Pathogen - hypothetical protein Bcep1808_6504 1 None None None 134291346 Common - hydrogenase assembly chaperone hypC/hupF Bcep1808_5935 6 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 134291071 Common - AraC-type transcriptional regulator domain protein Bcep1808_5647 122 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291335 Common - hypothetical protein Bcep1808_5921 2 None None None 134291573 Common - acetate kinase Bcep1808_6176 161 COG0282 ackA, Acetate kinase Energy production and conversion 134291164 Common - hypothetical protein Bcep1808_5741 2 None None None 134291525 Pathogen - hypothetical protein Bcep1808_6121 1 None None None 134291543 Common - diguanylate cyclase Bcep1808_6143 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134291645 Pathogen - hypothetical protein Bcep1808_6258 1 None None None 134291438 Pathogen - hypothetical protein Bcep1808_6027 2 COG2346 COG2346, Truncated hemoglobins General function prediction only 134291890 Pathogen - hypothetical protein Bcep1808_6507 1 None None None 134291529 Common - hypothetical protein Bcep1808_6125 2 None None None 134291000 Common - hypothetical protein Bcep1808_5576 44 COG3665 COG3665, Uncharacterized conserved protein Function unknown 134291320 Common - protein of unknown function DUF1365 Bcep1808_5906 63 COG3496 COG3496, Uncharacterized conserved protein Function unknown 134291034 Common - sugar transferase Bcep1808_5610 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 134291156 Common katE hydroperoxidase II Bcep1808_5733 126 COG0753 KatE, Catalase Inorganic ion transport and metabolism 134291475 Common - hypothetical protein Bcep1808_6067 53 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 134291483 Common - phage integrase family protein Bcep1808_6075 105 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 134291659 Common - protein of unknown function DUF224, cysteine-rich region domain protein Bcep1808_6273 137 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 134291108 Common - protein of unknown function DUF1232 Bcep1808_5685 4 COG3339 COG3339, Uncharacterized conserved protein Function unknown 134290978 Common - diguanylate cyclase (GGDEF domain) Bcep1808_5551 10 None None None 134291701 Common - RND efflux system, outer membrane lipoprotein, NodT family Bcep1808_6315 112 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291059 Common - two component transcriptional regulator, winged helix family Bcep1808_5635 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291061 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_5637 72 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291536 Common - porin, Gram-negative type Bcep1808_6133 24 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291899 Pathogen - hypothetical protein Bcep1808_6516 1 None None None 134291147 Common - CBS domain containing protein Bcep1808_5724 172 COG0517 COG0517, FOG: CBS domain General function prediction only 134291595 Common - plasmid pRiA4b ORF-3 family protein Bcep1808_6200 47 None None None 134291380 Common - conserved hypothetical signal peptide protein Bcep1808_5969 6 None None None 134291554 Common - hypothetical protein Bcep1808_6155 2 None None None 134290945 Common - methionine sulfoxide reductase A Bcep1808_5515 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 134291914 Pathogen - hypothetical protein Bcep1808_6531 1 None None None 134291567 Common - secretion protein HlyD family protein Bcep1808_6170 105 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134290971 Common - transposase IS116/IS110/IS902 family protein Bcep1808_5543 100 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291383 Common - tryptophan halogenase Bcep1808_5972 80 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 134291934 Common - DNA topoisomerase, type I, putative Bcep1808_6553 44 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 134291955 Common - transcriptional regulator, GntR family Bcep1808_6574 133 COG1802 GntR, Transcriptional regulators Transcription 134291078 Common - UspA domain protein Bcep1808_5654 143 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134291284 Common - Catalase Bcep1808_5870 46 COG3546 COG3546, Mn-containing catalase Inorganic ion transport and metabolism 134291513 Common - hypothetical protein Bcep1808_6108 2 None None None 134291279 Common - transposase, IS4 family protein Bcep1808_5865 68 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291541 Common - Integrase, catalytic region Bcep1808_6140 80 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 134290903 Pathogen - hypothetical protein Bcep1808_5473 1 None None None 134291437 Common - NifQ family protein Bcep1808_6026 23 None None None 161648989 Common - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Bcep1808_5672 217 COG1049 AcnB, Aconitase B Energy production and conversion 134291237 Common - succinate dehydrogenase iron-sulfur subunit Bcep1808_5821 202 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 134291759 Common - secretion protein HlyD family protein Bcep1808_6375 111 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134291861 Pathogen - Flp/Fap pilin component Bcep1808_6478 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 134291405 Common - nitrogenase cofactor biosynthesis protein NifB Bcep1808_5994 66 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 134291773 Common - metal-dependent phosphohydrolase Bcep1808_6390 17 None None None 134291127 Common - LmbE family protein Bcep1808_5704 3 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 134291113 Pathogen - hypothetical protein Bcep1808_5690 1 None None None 134291234 Pathogen - hypothetical protein Bcep1808_5818 1 None None None 134291446 Common - Cupin 2, conserved barrel domain protein Bcep1808_6035 38 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 134291170 Pathogen - hypothetical protein Bcep1808_5751 2 None None None 134290935 Common - AMP-dependent synthetase and ligase Bcep1808_5505 218 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 134291094 Common - putative CheW protein Bcep1808_5671 118 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 134291252 Common - pyruvate decarboxylase Bcep1808_5836 220 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 134291396 Common - nitrogen fixation protein NifW Bcep1808_5985 23 None None None 134291179 Common - AMP-dependent synthetase and ligase Bcep1808_5760 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291090 Common - histidine kinase, dimerisation/phosphoacceptor Bcep1808_5666 159 COG3899 COG3899, Predicted ATPase General function prediction only 134291700 Pathogen - hypothetical protein Bcep1808_6314 1 None None None 134291909 Common - polysaccharide export protein Bcep1808_6526 111 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 134291524 Common - hypothetical protein Bcep1808_6120 22 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 134291032 Common - transcriptional regulator, LysR family Bcep1808_5608 133 COG0583 LysR, Transcriptional regulator Transcription 134291029 Common - metabolite/H+ symporter, major facilitator superfamily (MFS) Bcep1808_5605 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291813 Common - putative transcriptional regulator, AsnC family Bcep1808_6430 140 COG1522 Lrp, Transcriptional regulators Transcription 134290967 Common - transposase IS3/IS911 family protein Bcep1808_5538 58 None None None 134291206 Common - VirB8 family protein Bcep1808_5788 28 COG3736 VirB8, Type IV secretory pathway, component VirB8 Intracellular trafficking and secretion 134291329 Common - transcriptional regulator, AraC family Bcep1808_5915 138 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 134291390 Common - tetratricopeptide TPR_2 Bcep1808_5979 9 None None None 134291220 Common - hypothetical protein Bcep1808_5802 2 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 134291583 Pathogen - hypothetical protein Bcep1808_6186 1 None None None 134291776 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6393 126 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134290991 Pathogen - hypothetical protein Bcep1808_5567 1 None None None 134291946 Common - RNA polymerase, sigma 70 subunit, RpoD family Bcep1808_6565 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 134291497 Common - protein of unknown function DUF156 Bcep1808_6090 22 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 134291840 Common - regulator protein FrmR Bcep1808_6457 43 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 134291371 Common - Histidine ammonia-lyase Bcep1808_5960 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 134291615 Common - hypothetical protein Bcep1808_6223 3 None None None 134291296 Pathogen - hypothetical protein Bcep1808_5882 1 None None None 134291601 Pathogen - hypothetical protein Bcep1808_6208 1 None None None 134291870 Common - response regulator receiver modulated metal dependent phosphohydrolase Bcep1808_6487 219 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 134291987 Common - OsmC family protein Bcep1808_6607 91 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 134290965 Pathogen - hypothetical protein Bcep1808_5535 1 None None None 134291863 Pathogen - hypothetical protein Bcep1808_6480 1 None None None 134291940 Common - Prolyl aminopeptidase Bcep1808_6559 84 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 134290897 Common - Fusaric acid resistance protein conserved region Bcep1808_5467 46 COG1289 COG1289, Predicted membrane protein Function unknown 134291246 Common - cytochrome c, class I Bcep1808_5830 67 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 134290982 Pathogen - hypothetical protein Bcep1808_5556 1 None None None 134291697 Common - ATP-dependent metalloprotease FtsH Bcep1808_6311 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 134291122 Common - glycosyl transferase, family 9 Bcep1808_5699 84 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 134291317 Pathogen - hypothetical protein Bcep1808_5903 1 None None None 134291263 Common - NUDIX hydrolase Bcep1808_5847 6 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 134291854 Common - TadE family protein Bcep1808_6471 10 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 134291835 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6452 69 COG1609 PurR, Transcriptional regulators Transcription 134290923 Common - hypothetical protein Bcep1808_5493 31 COG5654 COG5654, Uncharacterized conserved protein Function unknown 134291846 Common - hypothetical protein Bcep1808_6463 19 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 134291868 Common - poly(3-hydroxybutyrate) depolymerase-like protein Bcep1808_6485 29 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 134291277 Common - NmrA family protein Bcep1808_5862 93 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 134291412 Common - hypothetical protein Bcep1808_6001 6 None None None 134291732 Common - two component transcriptional regulator, LuxR family Bcep1808_6347 173 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 134291849 Common - type II secretion system protein Bcep1808_6466 75 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 134291353 Common - hydrogenase accessory protein HypB Bcep1808_5942 110 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 134291188 Common - inner-membrane translocator Bcep1808_5770 146 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 134291019 Common - cytochrome B561 Bcep1808_5595 18 COG3038 CybB, Cytochrome B561 Energy production and conversion 134291106 Common - Dyp-type peroxidase family Bcep1808_5683 55 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 134291932 Common - ABC transporter related Bcep1808_6551 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 134291575 Common - transposase, IS4 family protein Bcep1808_6178 27 None None None 134290937 Common - acetyl-CoA acetyltransferase Bcep1808_5507 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 134291181 Common - 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein Bcep1808_5762 48 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 134291500 Common - hypothetical protein Bcep1808_6094 2 None None None 134291045 Common - glycosyl transferase, group 1 Bcep1808_5621 54 COG2327 WcaK, Uncharacterized conserved protein Function unknown 134291088 Common - transcriptional regulator, winged helix family Bcep1808_5664 132 COG3903 COG3903, Predicted ATPase General function prediction only 134291191 Common - ABC branched chain amino acid family transporter, periplasmic ligand binding protein Bcep1808_5773 127 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 134291626 Pathogen - hypothetical protein Bcep1808_6236 1 None None None 134291742 Pathogen - hypothetical protein Bcep1808_6358 1 None None None 134291593 Common - IS66 Orf2 family protein Bcep1808_6198 52 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134290890 Common - putative transcriptional regulator, AsnC family Bcep1808_5460 152 COG1522 Lrp, Transcriptional regulators Transcription 134291484 Pathogen - hypothetical protein Bcep1808_6076 1 None None None 134291357 Common - hydrogenase expression/formation protein HypE Bcep1808_5946 131 COG0309 HypE, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 134291969 Common - GntR domain protein Bcep1808_6588 113 COG2186 FadR, Transcriptional regulators Transcription 134291925 Pathogen - hypothetical protein Bcep1808_6544 1 None None None 134291962 Common - MlrC domain protein Bcep1808_6581 31 COG5476 COG5476, Uncharacterized conserved protein Function unknown 134291760 Common - RND efflux system, outer membrane lipoprotein, NodT family Bcep1808_6376 102 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291119 Common - glycosyl transferase, family 9 Bcep1808_5696 84 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 134291786 Common - efflux transporter, RND family, MFP subunit Bcep1808_6403 162 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 134291249 Common - cytochrome c, monohaem Bcep1808_5833 158 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 134290954 Common - putative transcriptional regulator Bcep1808_5524 59 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 134291424 Common - globin Bcep1808_6013 66 COG2346 COG2346, Truncated hemoglobins General function prediction only 134291394 Common - electron transfer flavoprotein beta-subunit Bcep1808_5983 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 134291458 Common - putative transcriptional regulator, GntR family Bcep1808_6050 154 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 134291110 Common - Alcohol dehydrogenase GroES domain protein Bcep1808_5687 210 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 134291131 Common - transport-associated Bcep1808_5708 38 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291212 Common - putative DNA replication primase protein Bcep1808_5794 24 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 134291892 Common - phosphoesterase, PA-phosphatase related Bcep1808_6509 8 None None None 134291825 Common - Arsenical pump membrane protein Bcep1808_6442 131 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 134291783 Common - hypothetical protein Bcep1808_6400 66 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 134290916 Pathogen - hypothetical protein Bcep1808_5486 1 None None None 134291879 Common - GtrA family protein Bcep1808_6496 4 COG2246 COG2246, Predicted membrane protein Function unknown 134291414 Common - NifT/FixU family protein Bcep1808_6003 21 COG5554 NifU, Nitrogen fixation protein Secondary metabolites biosynthesis, transport, and catabolism 134291585 Common - alkylhydroperoxidase like protein, AhpD family Bcep1808_6188 55 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 134290989 Pathogen - hypothetical protein Bcep1808_5565 1 None None None 134291477 Pathogen - hypothetical protein Bcep1808_6069 1 None None None 134291024 Common - major facilitator superfamily MFS_1 Bcep1808_5600 85 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 134291057 Pathogen - hypothetical protein Bcep1808_5633 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 134290920 Common - Carboxymethylenebutenolidase Bcep1808_5490 117 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 134291030 Common - CitB domain protein Bcep1808_5606 18 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 134291255 Common - hypothetical protein Bcep1808_5839 6 None None None 134291073 Common - alpha/beta hydrolase fold Bcep1808_5649 134 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 134291937 Common - pyrroloquinoline quinone biosynthesis protein PqqC Bcep1808_6556 40 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 134291172 Common - Integrase, catalytic region Bcep1808_5753 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 134291871 Common - Antibiotic biosynthesis monooxygenase Bcep1808_6488 31 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 134291950 Common - alpha/beta hydrolase fold Bcep1808_6569 121 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 134291467 Common - hypothetical protein Bcep1808_6059 7 None None None 134291745 Common - putative signal-transduction protein with CBS domains Bcep1808_6361 89 COG0517 COG0517, FOG: CBS domain General function prediction only 134291203 Common - type IV secretion/conjugal transfer ATPase, VirB4 family Bcep1808_5785 59 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 134290925 Pathogen - hypothetical protein Bcep1808_5495 1 None None None 134291511 Common - manganese and iron superoxide dismutase Bcep1808_6106 201 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 134291594 Common - transposase IS66 Bcep1808_6199 62 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291077 Common - 2-keto-4-pentenoate hydratase-like protein Bcep1808_5653 49 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 134291889 Common - putative flagellar transcriptional activator FlhD Bcep1808_6506 19 None None None 134291408 Common - hypothetical protein Bcep1808_5997 2 None None None 134291270 Pathogen - hypothetical protein Bcep1808_5854 1 None None None 134291120 Common - Carbamoyltransferase Bcep1808_5697 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 134291225 Common - 4-alpha-glucanotransferase Bcep1808_5809 119 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 134291508 Common - chromate resistance exported protein Bcep1808_6103 31 COG4275 COG4275, Uncharacterized conserved protein Function unknown 134291416 Common - DegT/DnrJ/EryC1/StrS aminotransferase Bcep1808_6005 194 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 134291794 Common - FAD dependent oxidoreductase Bcep1808_6411 99 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 134291729 Pathogen - hypothetical protein Bcep1808_6343 1 None None None 134291331 Common - response regulator receiver protein Bcep1808_5917 193 COG4566 TtrR, Response regulator Signal transduction mechanisms 134290938 Common - transcriptional regulator, TetR family Bcep1808_5508 63 COG1309 AcrR, Transcriptional regulator Transcription 134291553 Common - cytochrome c, class I Bcep1808_6154 74 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 134291182 Pathogen - phosphopantetheine-binding Bcep1808_5763 2 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291314 Common - RNA polymerase, sigma-24 subunit, ECF subfamily Bcep1808_5900 142 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 134291283 Pathogen - hypothetical protein Bcep1808_5869 1 None None None 134291761 Common - Thioredoxin-disulfide reductase Bcep1808_6377 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 134291561 Common - acetoacetyl-CoA reductase Bcep1808_6164 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291105 Common - Linocin_M18 bacteriocin protein Bcep1808_5682 20 COG1659 COG1659, Uncharacterized protein, linocin/CFP29 homolog Function unknown 134291641 Common - helicase domain protein Bcep1808_6253 80 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 134291682 Common - alkylhydroperoxidase like protein, AhpD family Bcep1808_6296 52 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 134291724 Common - putative transcriptional regulator, Crp/Fnr family Bcep1808_6338 154 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 134291667 Common - hypothetical protein Bcep1808_6281 4 None None None 134291478 Common - hypothetical protein Bcep1808_6070 5 None None None 134291815 Common - diguanylate cyclase Bcep1808_6432 175 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134291125 Common - two component, sigma54 specific, transcriptional regulator, Fis family Bcep1808_5702 174 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 134291213 Common - putative DNA primase, DNA transfer TraO-like protein Bcep1808_5795 18 None None None 134291569 Common - ABC-2 type transporter Bcep1808_6172 112 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 134291944 Common - cytochrome c, class I Bcep1808_6563 6 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 134291648 Common - hypothetical protein Bcep1808_6261 18 None None None 134291040 Pathogen - hypothetical protein Bcep1808_5616 1 None None None 134291333 Pathogen - hypothetical protein Bcep1808_5919 1 None None None 134291155 Pathogen - hypothetical protein Bcep1808_5732 1 None None None 134291222 Common - protein of unknown function DUF932 Bcep1808_5806 23 None None None 134291487 Common - transposase IS66 Bcep1808_6080 59 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291510 Pathogen - hypothetical protein Bcep1808_6105 1 None None None 134291158 Common - DNA primase, small subunit Bcep1808_5735 74 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 134291978 Common - transcriptional regulator, LysR family Bcep1808_6598 178 COG0583 LysR, Transcriptional regulator Transcription 134291791 Common - amidohydrolase Bcep1808_6408 172 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 134291374 Common - putative lipoprotein transmembrane Bcep1808_5963 45 COG4258 COG4258, Predicted exporter General function prediction only 134291768 Common - (2Fe-2S)-binding domain protein Bcep1808_6385 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 134291942 Pathogen - hypothetical protein Bcep1808_6561 1 None None None 134291572 Common - phosphate acetyltransferase Bcep1808_6175 147 COG0280 Pta, Phosphotransacetylase Energy production and conversion 134291007 Common - hypothetical protein Bcep1808_5583 203 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 134291002 Common - urea amidolyase related protein Bcep1808_5578 230 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 134291522 Pathogen - hypothetical protein Bcep1808_6118 1 None None None 134290984 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcep1808_5560 85 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 134290998 Common - histidine utilization repressor Bcep1808_5574 124 COG2188 PhnF, Transcriptional regulators Transcription 134291322 Common - Lipocalin family protein Bcep1808_5908 60 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 134291678 Common - UspA domain protein Bcep1808_6292 81 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134291824 Common - transcriptional regulator, LysR family Bcep1808_6441 146 COG0583 LysR, Transcriptional regulator Transcription 134290944 Common - Rieske (2Fe-2S) domain protein Bcep1808_5514 86 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 134291133 Common - hypothetical protein Bcep1808_5710 13 None None None 134291422 Common - Ankyrin Bcep1808_6011 73 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 134291810 Common - GCN5-related N-acetyltransferase Bcep1808_6427 28 COG3153 COG3153, Predicted acetyltransferase General function prediction only 134291298 Common - HipA domain protein Bcep1808_5884 74 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 134291787 Common - RND efflux system, outer membrane lipoprotein, NodT family Bcep1808_6404 109 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134290892 Common - creatinase Bcep1808_5462 141 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 134291291 Pathogen - Phosphotransferase system, phosphocarrier protein HPr Bcep1808_5877 1 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 134291080 Common - nitrate reductase, alpha subunit Bcep1808_5656 113 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 134291876 Pathogen - hypothetical protein Bcep1808_6493 1 None None None 134291963 Common - amidase, hydantoinase/carbamoylase family Bcep1808_6582 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 134291613 Common - Integrase, catalytic region Bcep1808_6221 27 None None None 134291358 Common - two component, sigma54 specific, transcriptional regulator, Fis family Bcep1808_5947 203 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 134291574 Common - enoyl-(acyl carrier protein) reductase Bcep1808_6177 230 COG0623 FabI, Enoyl- acyl-carrier-protein 134291587 Common - hypothetical protein Bcep1808_6190 20 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 134291623 Common - exodeoxyribonuclease V, beta subunit Bcep1808_6233 192 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 134291531 Common - TniB family protein Bcep1808_6127 28 COG2842 COG2842, Uncharacterized ATPase, putative transposase General function prediction only 134291141 Common - response regulator receiver protein Bcep1808_5718 160 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291750 Common - extracellular solute-binding protein, family 3 Bcep1808_6366 112 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 134291992 Common - Extracellular ligand-binding receptor Bcep1808_6614 142 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 134291651 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6265 79 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291193 Common - protein of unknown function DUF1185 Bcep1808_5775 23 None None None 134291461 Common - Radical SAM domain protein Bcep1808_6053 36 COG2516 COG2516, Biotin synthase-related enzyme General function prediction only 134290957 Common - transposase, IS4 family protein Bcep1808_5527 45 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 134291083 Common - respiratory nitrate reductase, gamma subunit Bcep1808_5659 57 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 134291244 Common benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase Bcep1808_5828 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291853 Common - TadE family protein Bcep1808_6470 19 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 134291087 Common - hypothetical protein Bcep1808_5663 6 None None None 134291867 Common - GtrA family protein Bcep1808_6484 3 COG2246 COG2246, Predicted membrane protein Function unknown 134291728 Common - conserved hypothetical protein 730 Bcep1808_6342 103 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 134291361 Common - PAS/PAC sensor signal transduction histidine kinase Bcep1808_5950 220 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 134291635 Common - transposase, IS4 family protein Bcep1808_6245 45 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 134291746 Pathogen - hypothetical protein Bcep1808_6362 1 None None None 134291548 Pathogen - hypothetical protein Bcep1808_6148 1 None None None 134291265 Common - NmrA family protein Bcep1808_5849 16 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 134291927 Pathogen - hypothetical protein Bcep1808_6546 1 None None None 134291448 Common - hypothetical protein Bcep1808_6037 22 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 134291607 Common - hypothetical protein Bcep1808_6215 3 None None None 134290910 Pathogen - hypothetical protein Bcep1808_5480 1 None None None 134291102 Common - acetylornithine deacetylase Bcep1808_5679 203 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 134290893 Common - ornithine cyclodeaminase Bcep1808_5463 68 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 134291538 Common - IS66 Orf2 family protein Bcep1808_6136 41 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291916 Common - NUDIX hydrolase Bcep1808_6533 22 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 134291694 Common - polysaccharide deacetylase Bcep1808_6308 74 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 134290917 Common - transcriptional regulator, LysR family Bcep1808_5487 168 COG0583 LysR, Transcriptional regulator Transcription 134291312 Common - deoxyribodipyrimidine photolyase-related protein Bcep1808_5898 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 134291351 Common - hypothetical protein Bcep1808_5940 12 COG3259 FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit Energy production and conversion 134291735 Common - hypothetical protein Bcep1808_6351 30 COG0778 NfnB, Nitroreductase Energy production and conversion 134291389 Pathogen - transcriptional regulator, Fis family Bcep1808_5978 1 None None None 134291642 Common - hypothetical protein Bcep1808_6255 10 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 134291838 Common - Limonene-1,2-epoxide hydrolase Bcep1808_6455 4 COG4308 LimA, Limonene-1,2-epoxide hydrolase Secondary metabolites biosynthesis, transport, and catabolism 134290888 Common - hypothetical protein Bcep1808_5458 236 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 134291986 Common - Alpha/beta hydrolase fold-3 domain protein Bcep1808_6606 129 COG0657 Aes, Esterase/lipase Lipid metabolism 134291580 Common - Hemerythrin HHE cation binding domain protein Bcep1808_6183 20 COG3945 COG3945, Uncharacterized conserved protein Function unknown 134291673 Common - histidine kinase Bcep1808_6287 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134290966 Pathogen - hypothetical protein Bcep1808_5536 1 None None None 134290993 Common - extracellular solute-binding protein, family 3 Bcep1808_5569 155 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 134291833 Common - xylulokinase Bcep1808_6450 180 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 134291858 Common - SAF domain Bcep1808_6475 67 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 134291431 Common - nitrogenase MoFe cofactor biosynthesis protein NifE Bcep1808_6020 54 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 134290899 Common - efflux transporter, RND family, MFP subunit Bcep1808_5469 160 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 134291167 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Bcep1808_5745 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 134291959 Pathogen - hypothetical protein Bcep1808_6578 1 None None None 134291611 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_6219 12 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291793 Common - FAD dependent oxidoreductase Bcep1808_6410 101 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 134291662 Common - 6-phosphogluconate dehydrogenase, NAD-binding Bcep1808_6276 121 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 134291289 Common - GCN5-related N-acetyltransferase Bcep1808_5875 56 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 134291231 Pathogen - hypothetical protein Bcep1808_5815 1 None None None 134290940 Common - putative oxidoreductase Bcep1808_5510 187 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 134291338 Common - major facilitator superfamily MFS_1 Bcep1808_5924 10 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 134291184 Common - GntR domain protein Bcep1808_5765 115 COG2186 FadR, Transcriptional regulators Transcription 134291392 Common - putative ferredoxin like protein; FixX Bcep1808_5981 37 COG2440 FixX, Ferredoxin-like protein Energy production and conversion 134291755 Common - transcriptional regulator, winged helix family Bcep1808_6371 114 COG3903 COG3903, Predicted ATPase General function prediction only 134291506 Common - Rhodanese domain protein Bcep1808_6101 17 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 134291981 Common - RNA-directed DNA polymerase (Reverse transcriptase) Bcep1808_6601 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 134291831 Common - D-xylose ABC transporter, ATPase subunit Bcep1808_6448 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 134291433 Common - nitrogen fixation protein NifX Bcep1808_6022 33 None None None 134291897 Pathogen - hypothetical protein Bcep1808_6514 1 None None None 134291731 Common - diguanylate cyclase Bcep1808_6345 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134290907 Common - flavodoxin/nitric oxide synthase Bcep1808_5477 28 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 134291952 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Bcep1808_6571 44 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 134291905 Common - NAD-dependent epimerase/dehydratase Bcep1808_6522 223 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 134291796 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6413 121 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291117 Common - short-chain dehydrogenase/reductase SDR Bcep1808_5694 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 134291098 Common - tryptophanyl-tRNA synthetase II Bcep1808_5675 236 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 134291714 Common - Alcohol dehydrogenase GroES domain protein Bcep1808_6328 202 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 134291399 Common - ferredoxin, 2Fe-2S type, ISC system Bcep1808_5988 84 COG0633 Fdx, Ferredoxin Energy production and conversion 134291301 Common - MgtC/SapB transporter Bcep1808_5887 4 COG1285 SapB, Uncharacterized membrane protein Function unknown 134291238 Common - HAD-superfamily hydrolase, subfamily IA, variant 3 Bcep1808_5822 196 COG0546 Gph, Predicted phosphatases General function prediction only 134291960 Common - hypothetical protein Bcep1808_6579 2 None None None 134291075 Common - hypothetical protein Bcep1808_5651 6 None None None 134291387 Common - two component transcriptional regulator, winged helix family Bcep1808_5976 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291967 Common - inner-membrane translocator Bcep1808_6586 142 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 134291257 Common - protein of unknown function DUF305 Bcep1808_5841 39 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 134290931 Pathogen - hypothetical protein Bcep1808_5501 1 None None None 134291174 Common - 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal domain protein Bcep1808_5755 5 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 134291455 Common - cyanate hydratase Bcep1808_6046 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 134290973 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_5545 16 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134291488 Common - IS66 Orf2 family protein Bcep1808_6081 52 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291201 Common - putative type IV secretion system protein VirB2/TraC Bcep1808_5783 2 None None None 134291709 Common - RND efflux system, outer membrane lipoprotein, NodT family Bcep1808_6323 106 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291592 Common - transposase IS3/IS911 family protein Bcep1808_6197 17 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291976 Common - DoxX family protein Bcep1808_6596 45 COG2259 COG2259, Predicted membrane protein Function unknown 134291015 Common - aldehyde dehydrogenase Bcep1808_5591 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 134291949 Common - General substrate transporter Bcep1808_6568 138 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 134291049 Common - hypothetical protein Bcep1808_5625 30 COG5654 COG5654, Uncharacterized conserved protein Function unknown 134291004 Common - binding-protein-dependent transport systems inner membrane component Bcep1808_5580 174 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 134291676 Common - cytochrome B561 Bcep1808_6290 56 COG3038 CybB, Cytochrome B561 Energy production and conversion 134291376 Common - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ Bcep1808_5965 16 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 134291316 Pathogen - hypothetical protein Bcep1808_5902 1 None None None 134291009 Common - glycosyl hydrolase, BNR repeat-containing protein Bcep1808_5585 46 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 134291917 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_6534 87 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 134291766 Common - Aminocarboxymuconate-semialdehyde decarboxylase Bcep1808_6383 46 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 134291997 Common - FAD linked oxidase domain protein Bcep1808_6619 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 134291691 Pathogen - hypothetical protein Bcep1808_6305 1 None None None 134291471 Common - putative transcriptional regulator, GntR family Bcep1808_6063 32 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 134291281 Common - transposase IS3/IS911 family protein Bcep1808_5867 5 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291900 Common - glycosyl transferase, group 1 Bcep1808_6517 128 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134291910 Common - sugar transferase Bcep1808_6527 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 134291726 Common - hypothetical protein Bcep1808_6340 26 COG0778 NfnB, Nitroreductase Energy production and conversion 134291169 Common - histone family protein nucleoid-structuring protein H-NS Bcep1808_5750 12 COG2916 Hns, DNA-binding protein H-NS General function prediction only 134290900 Common - transcriptional regulator, Fis family Bcep1808_5470 106 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 134291698 Common - hypothetical protein Bcep1808_6312 11 None None None 134291219 Pathogen - hypothetical protein Bcep1808_5801 1 None None None 134291465 Common - hypothetical protein Bcep1808_6057 16 None None None 134290927 Common - metallophosphoesterase Bcep1808_5497 74 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 134291563 Common - acetate kinase Bcep1808_6166 161 COG0282 ackA, Acetate kinase Energy production and conversion 134291558 Common - Integrase, catalytic region Bcep1808_6160 80 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291671 Common - polar amino acid ABC transporter, inner membrane subunit Bcep1808_6285 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 134291551 Common - two component transcriptional regulator, LuxR family Bcep1808_6152 175 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 134291272 Common - protein of unknown function UPF0126 Bcep1808_5856 133 COG2860 COG2860, Predicted membrane protein Function unknown 134291722 Common - UspA domain protein Bcep1808_6336 81 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134291418 Common - ferredoxin Bcep1808_6007 63 COG3894 COG3894, Uncharacterized metal-binding protein General function prediction only 134291719 Common - acetate kinase Bcep1808_6333 161 COG0282 ackA, Acetate kinase Energy production and conversion 134291752 Common - response regulator receiver protein Bcep1808_6368 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291303 Common - hypothetical protein Bcep1808_5889 3 None None None 134290933 Pathogen - hypothetical protein Bcep1808_5503 1 None None None 134291737 Common - periplasmic protein of unknown function, DUF1488 Bcep1808_6353 2 None None None 134291195 Pathogen - hypothetical protein Bcep1808_5777 1 None None None 134291517 Common - hypothetical protein Bcep1808_6113 8 None None None 134291378 Common - 3-oxoacyl-(acyl carrier protein) synthase II Bcep1808_5967 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291805 Common - putative transcriptional regulator, GntR family Bcep1808_6422 171 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 134291600 Pathogen - hypothetical protein Bcep1808_6207 1 None None None 134291343 Common - nickel-dependent hydrogenase, large subunit Bcep1808_5932 105 COG0374 HyaB, Ni,Fe-hydrogenase I large subunit Energy production and conversion 134291366 Common - putative acyl-carrier-protein Bcep1808_5955 45 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 134291491 Pathogen - hypothetical protein Bcep1808_6084 1 None None None 134291789 Common - two component heavy metal response transcriptional regulator, winged helix family Bcep1808_6406 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 134291341 Common - high-affinity nickel-transporter Bcep1808_5930 37 COG3376 HoxN, High-affinity nickel permease Inorganic ion transport and metabolism 134291204 Common - TrbL/VirB6 plasmid conjugal transfer protein Bcep1808_5786 22 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 134291929 Common - integral membrane sensor signal transduction histidine kinase Bcep1808_6548 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134291633 Pathogen - hypothetical protein Bcep1808_6243 1 None None None 134291267 Pathogen - hypothetical protein Bcep1808_5851 1 None None None 134291630 Common - GTP-binding protein, HSR1-related Bcep1808_6240 11 COG0486 ThdF, Predicted GTPase General function prediction only 134291579 Common - NnrS family protein Bcep1808_6182 55 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 134291655 Common - porin, Gram-negative type Bcep1808_6269 17 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 134291227 Common - glycogen debranching enzyme GlgX Bcep1808_5811 146 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 134291748 Pathogen - hypothetical protein Bcep1808_6364 1 None None None 134291546 Common - protein of unknown function DUF125, transmembrane Bcep1808_6146 80 COG1814 COG1814, Uncharacterized membrane protein Function unknown 134291990 Common - hypothetical protein Bcep1808_6610 9 None None None 134291498 Common - phage integrase family protein Bcep1808_6092 201 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 134291160 Common - hypothetical protein Bcep1808_5737 15 None None None 134290961 Pathogen - hypothetical protein Bcep1808_5531 1 None None None 134291135 Common - short-chain dehydrogenase/reductase SDR Bcep1808_5712 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 134291420 Common - nitrogenase-associated protein Bcep1808_6009 18 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 134290950 Common - histone family protein DNA-binding protein Bcep1808_5520 209 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 134290942 Common - NCS1 nucleoside transporter family Bcep1808_5512 78 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 134291176 Pathogen - hypothetical protein Bcep1808_5757 2 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 134291468 Common - methylmalonyl-CoA mutase Bcep1808_6060 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 134291217 Pathogen - hypothetical protein Bcep1808_5799 1 None None None 134291874 Common - flavodoxin/nitric oxide synthase Bcep1808_6491 66 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 134291130 Common - glycosyl transferase, group 1 Bcep1808_5707 208 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134290963 Common - transport-associated Bcep1808_5533 6 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 134291965 Common - ABC transporter related Bcep1808_6584 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 134291829 Common - integral membrane sensor signal transduction histidine kinase Bcep1808_6446 181 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 134291293 Common - spermidine synthase-like protein Bcep1808_5879 55 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 134291920 Pathogen - hypothetical protein Bcep1808_6537 1 None None None 134291817 Common - autotransporter-associated beta strand repeat protein Bcep1808_6434 27 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 134291428 Common - nitrogenase molybdenum-iron protein beta chain Bcep1808_6017 54 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 134291822 Common - Cupin 2, conserved barrel domain protein Bcep1808_6439 36 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 134291397 Common - serine O-acetyltransferase Bcep1808_5986 203 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 134291812 Common - hypothetical protein Bcep1808_6429 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 134291656 Common - membrane protein-like protein Bcep1808_6270 6 COG1289 COG1289, Predicted membrane protein Function unknown 134291143 Common - sodium:dicarboxylate symporter Bcep1808_5720 141 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 134291146 Common - PRC-barrel domain protein Bcep1808_5723 39 COG1873 COG1873, Uncharacterized conserved protein Function unknown 134291589 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bcep1808_6193 209 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 134291533 Common - transposase IS3/IS911 family protein Bcep1808_6129 55 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291039 Common - polysaccharide biosynthesis protein Bcep1808_5615 34 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 134291116 Common - hypothetical protein Bcep1808_5693 4 None None None 134291903 Common - hypothetical protein Bcep1808_6520 4 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 134290959 Pathogen - hypothetical protein Bcep1808_5529 1 None None None 134291109 Pathogen - hypothetical protein Bcep1808_5686 1 None None None 134291851 Common - type II secretion system protein E Bcep1808_6468 163 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 134291401 Common - iron-sulfur cluster assembly accessory protein Bcep1808_5990 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 134291680 Common - hypothetical protein Bcep1808_6294 3 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 134291984 Common - LrgB family protein Bcep1808_6604 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 134291441 Common - molybdate ABC transporter, inner membrane subunit Bcep1808_6030 225 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 134290968 Common - transposase IS3/IS911 family protein Bcep1808_5539 26 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 134291939 Common - GAF modulated sigma54 specific transcriptional regulator, Fis family Bcep1808_6558 175 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 134291718 Common - UspA domain protein Bcep1808_6332 34 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 134290919 Common - transcriptional regulator, LysR family Bcep1808_5489 137 COG0583 LysR, Transcriptional regulator Transcription 134290995 Common - polar amino acid ABC transporter, inner membrane subunit Bcep1808_5571 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 134291865 Common - hypothetical protein Bcep1808_6482 9 None None None 134291055 Common - helix-turn-helix- domain containing protein, AraC type Bcep1808_5631 117 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 134291995 Common - Integrase, catalytic region Bcep1808_6617 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 134291068 Common - beta-ketothiolase Bcep1808_5644 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 134290895 Common - putative transcriptional regulator, GntR family Bcep1808_5465 159 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 134291664 Common - hypothetical protein Bcep1808_6278 20 COG2267 PldB, Lysophospholipase Lipid metabolism 134291605 Common - diguanylate cyclase Bcep1808_6213 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 134291801 Common - extracellular solute-binding protein, family 5 Bcep1808_6418 177 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 134291692 Common - hypothetical protein Bcep1808_6306 14 None None None 134291957 Common - dihydrodipicolinate synthetase Bcep1808_6576 58 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 134291022 Common - amino acid permease-associated region Bcep1808_5598 141 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 134291779 Common - hypothetical protein Bcep1808_6396 4 None None None 134291064 Common - NAD(P) transhydrogenase, beta subunit Bcep1808_5640 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 134291621 Pathogen - hypothetical protein Bcep1808_6231 1 None None None 134291590 Common - transposase Tn3 family protein Bcep1808_6195 54 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 134291689 Common - Uncharacterised conserved protein UCP016719 Bcep1808_6303 137 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown