Shewanella baltica OS155 plasmid pSbal01, complete sequence NC_009035 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 126090184 Common - electron transport complex protein RnfC Sbal_4547 84 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 126090128 Common - hypothetical protein Sbal_4491 22 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 126090165 Common - DNA-binding transcriptional regulator HexR Sbal_4528 92 COG1737 RpiR, Transcriptional regulators Transcription 126090207 Common - hypothetical protein Sbal_4570 179 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 126090140 Common - hypothetical protein Sbal_4503 7 None None None 126090152 Common - LexA regulated protein Sbal_4515 21 None None None 126090187 Common - SoxR-reducing system protein RsxE Sbal_4550 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 126090123 Common - hypothetical protein Sbal_4486 4 None None None 126090210 Common - hypothetical protein Sbal_4573 161 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 126090194 Common - putative sulfite oxidase subunit YedY Sbal_4557 124 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 126090197 Common - hypothetical protein Sbal_4560 156 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 126090175 Common - hypothetical protein Sbal_4538 5 None None None 126090205 Common - hypothetical protein Sbal_4568 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 126090181 Common - hypothetical protein Sbal_4544 160 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 126090173 Common - hypothetical protein Sbal_4536 175 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 126090119 Common - hypothetical protein Sbal_4482 24 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 126090178 Common - queuosine biosynthesis protein QueC Sbal_4541 176 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 126090142 Common - quinolinate synthetase Sbal_4505 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 126090192 Common - hypothetical protein Sbal_4555 123 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 126090143 Common - dihydrolipoamide acetyltransferase Sbal_4506 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 126090148 Common - phosphoglucomutase Sbal_4511 173 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 126090144 Common - hypothetical protein Sbal_4507 214 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 126090132 Common - fumarate/nitrate reduction transcriptional regulator Sbal_4495 158 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 126090153 Common - flavodoxin FldA Sbal_4516 73 COG0716 FldA, Flavodoxins Energy production and conversion 126090203 Common - hypothetical protein Sbal_4566 119 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 126090137 Common - hypothetical protein Sbal_4500 90 COG0391 COG0391, Uncharacterized conserved protein Function unknown 126090133 Common - universal stress protein UspE Sbal_4496 77 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 126090130 Common - hypothetical protein Sbal_4493 18 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 126090158 Common - aminotransferase AlaT Sbal_4521 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 126090171 Common - hypothetical protein Sbal_4534 1 None None None 126090195 Common - hypothetical protein Sbal_4558 147 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 126090190 Common - hypothetical protein Sbal_4553 172 COG0583 LysR, Transcriptional regulator Transcription 126090168 Common - hypothetical protein Sbal_4531 86 COG1309 AcrR, Transcriptional regulator Transcription 126090155 Common - elongation factor P Sbal_4518 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 126090146 Common - succinylglutamate desuccinylase Sbal_4509 24 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 126090139 Common - glyceraldehyde-3-phosphate dehydrogenase Sbal_4502 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 126090125 Common - hypothetical protein Sbal_4488 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 126090135 Common - hypothetical protein Sbal_4498 5 None None None 126090208 Common - hypothetical protein Sbal_4571 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 126090201 Common - hypothetical protein Sbal_4564 68 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 126090185 Common - hypothetical protein Sbal_4548 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 126090193 Common - putative sulfite oxidase subunit YedZ Sbal_4556 76 COG2717 COG2717, Predicted membrane protein Function unknown 126090163 Common - hypothetical protein Sbal_4526 119 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 126090177 Common - hypothetical protein Sbal_4540 163 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 126090160 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein Sbal_4523 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 126090188 Common - hypothetical protein Sbal_4551 240 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 126090176 Common - hypothetical protein Sbal_4539 215 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 126090169 Common - hypothetical protein Sbal_4532 16 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 126090141 Common - hypothetical protein Sbal_4504 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 126090127 Common - hypothetical protein Sbal_4490 80 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 126090166 Common - hypothetical protein Sbal_4529 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 126090206 Common ddl D-alanyl-alanine synthetase A Sbal_4569 208 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 126090198 Common - hypothetical protein Sbal_4561 175 COG0714 COG0714, MoxR-like ATPases General function prediction only 126090179 Common - hypothetical protein Sbal_4542 11 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 126090209 Common - hypothetical protein Sbal_4572 52 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 126090183 Common - electron transport complex protein RnfB Sbal_4546 126 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 126090162 Common - phosphogluconate dehydratase Sbal_4525 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 126090174 Common - hypothetical protein Sbal_4537 2 COG3691 COG3691, Uncharacterized protein conserved in bacteria Function unknown 126090191 Common - hypothetical protein Sbal_4554 9 None None None 126090124 Common - hypothetical protein Sbal_4487 151 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 126090147 Common - hypothetical protein Sbal_4510 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 126090204 Common - hypothetical protein Sbal_4567 16 COG0456 RimI, Acetyltransferases General function prediction only 126090151 Common - hypothetical protein Sbal_4514 8 None None None 126090121 Common - hypothetical protein Sbal_4484 1 None None None 126090149 Common - replication initiation regulator SeqA Sbal_4512 23 COG3057 SeqA, Negative regulator of replication initiationR DNA replication, recombination, and repair 126090131 Common - hypothetical protein Sbal_4494 66 COG2836 COG2836, Uncharacterized conserved protein Function unknown 126090122 Common - hypothetical protein Sbal_4485 123 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 126090157 Common - hypothetical protein Sbal_4520 58 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 126090164 Common - glucose-6-phosphate 1-dehydrogenase Sbal_4527 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 126090145 Common - hypothetical protein Sbal_4508 157 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 126090172 Common - hypothetical protein Sbal_4535 87 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 126090154 Common - hypothetical protein Sbal_4517 23 COG4394 COG4394, Uncharacterized protein conserved in bacteria Function unknown 126090138 Common - aromatic amino acid aminotransferase Sbal_4501 72 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 126090182 Common - Na(+)-translocating NADH-quinone reductase subunit E Sbal_4545 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 126090134 Common - hypothetical protein Sbal_4497 162 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 126090161 Common - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Sbal_4524 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 126090202 Common - hypothetical protein Sbal_4565 220 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 126090186 Common - electron transport complex protein RnfG Sbal_4549 59 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 126090129 Common - hypothetical protein Sbal_4492 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 126090150 Common - hypothetical protein Sbal_4513 170 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 126090170 Common - hypothetical protein Sbal_4533 92 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 126090196 Common - hypothetical protein Sbal_4559 149 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 126090120 Common - hypothetical protein Sbal_4483 24 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 126090159 Common - hypothetical protein Sbal_4522 25 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 126090167 Common - acyl-CoA dehydrogenase Sbal_4530 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 126090156 Common - hypothetical protein Sbal_4519 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 126090126 Common - hypothetical protein Sbal_4489 16 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 126090180 Common - excinuclease ABC subunit B Sbal_4543 229 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 126090200 Common - hypothetical protein Sbal_4563 108 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 126090136 Common - hypothetical protein Sbal_4499 31 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 126090199 Common - hypothetical protein Sbal_4562 35 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 126090189 Common - hypothetical protein Sbal_4552 1 None None None