Streptococcus sanguinis SK36, complete genome NC_009009 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 125717423 Common - Universal stress protein family, putative SSA_0563 70 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 125718698 Common - ABC-type multidrug transport system, ATPase component, putative SSA_1905 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717358 Common - ABC-type dipeptide/nickel transport system, periplasmic component, putative SSA_0493 199 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 125718517 Common dam Site-specific DNA-methyltransferase, putative SSA_1718 103 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 125718137 Common hemH Ferrochelatase, putative SSA_1321 133 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 125718931 Common - Conserved uncharacterized protein SSA_2147 1 None None None 125718822 Common - Integrase/recombinase, phage integrase family, putative SSA_2032 1 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 125719003 Common capD Cps9E, putative SSA_2221 160 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 125718668 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase SSA_1870 227 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 125717956 Common - Periplasmic iron transport lipoprotein, putative SSA_1129 28 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 125718006 Common topA DNA topoisomerase I SSA_1184 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 125717477 Common - hypothetical protein SSA_0620 4 None None None 125717596 Common nagB Glucosamine-6-phosphate deaminase, putative SSA_0746 84 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 125718523 Common - CBS domain protein, putative SSA_1724 145 COG0517 COG0517, FOG: CBS domain General function prediction only 125717007 Common adk adenylate kinase SSA_0128 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 125717727 Pathogen - hypothetical protein SSA_0884 2 None None None 125717048 Pathogen - hypothetical protein SSA_0170 1 None None None 125717633 Common uncH F0F1 ATP synthase subunit delta SSA_0785 61 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 125719132 Common - hypothetical protein SSA_2358 79 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 125717252 Common bglA Beta-glucosidase, putative SSA_0383 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 125719010 Common - Acetyltransferase (GNAT) family, putative SSA_2228 25 COG3981 COG3981, Predicted acetyltransferase General function prediction only 125717015 Common adcC ABC transporter, Zn porter, putative SSA_0136 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 125717458 Common - hypothetical protein SSA_0599 10 None None None 125718128 Common - RADC-like protein, putative SSA_1312 4 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 125718653 Common - hypothetical protein SSA_1855 132 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 125719027 Pathogen - hypothetical protein SSA_2248 1 None None None 125716973 Common - Cell wall metabolism, LysM type protein, putative SSA_0094 10 COG5373 COG5373, Predicted membrane protein Function unknown 125718041 Common gyrA DNA gyrase subunit A SSA_1220 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 125717478 Common - SOS responce UmuC protein, putative SSA_0621 172 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 125718703 Common - Conserved uncharacterized protein SSA_1911 206 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 125717040 Pathogen - hypothetical protein SSA_0162 1 None None None 125717963 Common - ATPases with chaperone activity, ATP-binding subunit, putative SSA_1136 240 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 125717265 Common - hypothetical protein SSA_0396 33 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 125717886 Common - hypothetical protein SSA_1055 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 125717507 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SSA_0652 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 125717864 Common rpsT 30S ribosomal protein S20 SSA_1032 156 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 125717913 Common - Conserved uncharacterized protein SSA_1083 4 COG4835 COG4835, Uncharacterized protein conserved in bacteria Function unknown 125719122 Common - Metal dependent hydrolase, putative SSA_2348 38 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 125717845 Common - Phosphoenolpyruvate synthase, putative SSA_1012 143 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 125718805 Common - hypothetical protein SSA_2018 47 COG2848 COG2848, Uncharacterized conserved protein Function unknown 125718587 Common - Integral membrane protein, possible receptor, putative SSA_1788 140 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 125718011 Common rbgA ribosomal biogenesis GTPase SSA_1189 145 COG1161 COG1161, Predicted GTPases General function prediction only 125716929 Common purB adenylosuccinate lyase SSA_0046 239 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 125717779 Common - NOL1/NOP2/sun family protein, putative SSA_0940 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 125717457 Pathogen - hypothetical protein SSA_0597 4 None None None 125717334 Common cobL cobalt-precorrin-6Y C(15)-methyltransferase SSA_0469 122 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 125718033 Common prs ribose-phosphate pyrophosphokinase SSA_1212 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 125717062 Common - hypothetical protein SSA_0183 5 COG4699 COG4699, Uncharacterized protein conserved in bacteria Function unknown 125716958 Common - Oxidoreductase, putative SSA_0077 188 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 125718961 Pathogen - hypothetical protein SSA_2178 1 None None None 125718324 Common rgpF Glycosyltransferase, putative SSA_1513 186 COG3754 RgpF, Lipopolysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 125717949 Common - Cytochrome C-type biogenesis protein, putative SSA_1121 147 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 125718271 Common - RNA methyltransferase, putative SSA_1459 201 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 125718233 Common dnaD hypothetical protein SSA_1419 17 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 125717129 Common - CAAX amino terminal protease family protein, putative SSA_0253 2 None None None 125718266 Common doc Prophage maintenance system killer protein (DOC: death-on-curing), putative SSA_2383 13 COG3654 Doc, Prophage maintenance system killer protein General function prediction only 125717385 Common eutL Ethanolamine utilization protein EutL, putative SSA_0521 16 COG4816 EutL, Ethanolamine utilization protein Amino acid transport and metabolism 125718251 Common hisI Phosphoribosyl-AMP cyclohydrolase, putative SSA_1441 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 125717161 Common gldA glycerol dehydrogenase SSA_0287 144 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 125717114 Common - hypothetical protein SSA_0238 4 None None None 125718920 Common rpmH 50S ribosomal protein L34 SSA_2136 5 None None None 125717555 Common citB aconitate hydratase SSA_0702 223 COG1048 AcnA, Aconitase A Energy production and conversion 125718345 Common bioY Biotin synthase, putative SSA_1536 104 COG1268 BioY, Uncharacterized conserved protein General function prediction only 125718644 Common pppL Phosphoprotein phosphatase, putative SSA_1846 136 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 125718580 Common xerD site-specific tyrosine recombinase XerD-like protein SSA_1780 6 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 125719005 Common - Capsular polysaccharide biosynthesis protein Wzd (chain length regulator), putative SSA_2223 41 COG3944 COG3944, Capsular polysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 125717280 Common pabB Anthranilate/para-aminobenzoate synthases component I/ Chorismate binding enzyme, putative SSA_0413 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 125718784 Common rpoE DNA-directed RNA polymerase subunit delta SSA_1996 12 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 125718763 Common - Histidine kinase, putative SSA_1973 143 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 125717155 Common - hypothetical protein SSA_0281 2 None None None 125717696 Common pcrA ATP-dependent DNA helicase, putative SSA_0852 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 125718713 Common - hypothetical protein SSA_1921 10 COG4687 COG4687, Uncharacterized protein conserved in bacteria Function unknown 125718606 Common - hypothetical protein SSA_1807 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 125717652 Common glmM Phosphoglucomutase/phosphomannomutase family protein, putative SSA_0804 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 125718285 Pathogen - Lipoprotein, putative SSA_1474 1 None None None 125718161 Common pyrR pyrimidine regulatory protein PyrR SSA_1345 111 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 125718893 Common gapA Glyceraldehyde 3-phosphate dehydrogenase, putative SSA_2108 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 125717517 Common - Multiple antibiotic resistance operon transcription repressor (MarR), putative SSA_0662 43 COG1846 MarR, Transcriptional regulators Transcription 125717780 Common pstS ABC-type phosphate transport system, periplasmic component, putative SSA_0941 161 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 125717922 Common dfrA Dihydrofolate reductase, putative SSA_1092 145 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 125717516 Common ileS isoleucyl-tRNA synthetase SSA_0661 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125719127 Common - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, putative SSA_2353 170 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 125718085 Pathogen crcB1 crcB-like protein 1, putative SSA_1266 1 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 125718909 Common - Small primase-like protein (Toprim domain), putative SSA_2125 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 125718221 Common - Histone acetyltransferase HPA2, putative SSA_1406 3 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 125718108 Pathogen - hypothetical protein SSA_1291 2 COG5660 COG5660, Predicted integral membrane protein Function unknown 125718143 Common - hypothetical protein SSA_1327 1 None None None 125717560 Common - Lactose phosphotransferase system transcriptional repressor, putative SSA_0707 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 125717578 Common - Metal-dependent membrane protease, putative SSA_0727 35 None None None 125718150 Pathogen - hypothetical protein SSA_1334 1 None None None 125717995 Pathogen - hypothetical protein SSA_1172 1 None None None 125717174 Common - hypothetical protein SSA_0300 9 None None None 125718638 Common - hypothetical protein SSA_1840 232 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 125718670 Common ftsL Cell division protein, putative SSA_1872 4 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 125718947 Pathogen - hypothetical protein SSA_2162 1 None None None 125717795 Pathogen - hypothetical protein SSA_0958 1 None None None 125718506 Common exoA Exodeoxyribonuclease, putative SSA_1706 195 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 125718206 Pathogen - hypothetical protein SSA_1391 1 None None None 125717818 Common - hypothetical protein SSA_0985 23 COG4922 COG4922, Uncharacterized protein conserved in bacteria Function unknown 125718553 Pathogen - hypothetical protein SSA_1754 1 None None None 125716951 Common axe1 Acetylxylan esterase, putative SSA_0070 20 COG3458 COG3458, Acetyl esterase (deacetylase) Secondary metabolites biosynthesis, transport, and catabolism 125718225 Common rmlA Glucose-1-phosphate thymidylytransferase, putative SSA_1411 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 125718021 Common fhs Formate--tetrahydrofolate ligase, putative SSA_1200 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 125717126 Common relA GTP pyrophosphokinase, putative SSA_0250 208 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 125718630 Common recX recombination regulator RecX SSA_1831 43 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 125717565 Common ctpE P-type ATPase-metal cation transport (calcium efflux), putative SSA_0712 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 125718926 Common argG argininosuccinate synthase SSA_2142 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 125717402 Common pduO PduO protein, putative SSA_0539 36 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 125716922 Common purE Phosphoribosylaminoimidazole carboxylase, catalytic subunit, putative SSA_0039 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 125718472 Pathogen - hypothetical protein SSA_1669 1 None None None 125717464 Common - ABC-type antimicrobial peptide transport system, ATPase component, putative SSA_0606 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125718019 Common - ATPase (PilT family), putative SSA_1198 2 None None None 125717230 Common - Trancriptional regulator, LysR-family, putative SSA_0359 3 None None None 125718976 Common - Nicotinamide mononucleotide transporter, putative SSA_2194 45 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 125718407 Common smpB SsrA-binding protein SSA_1601 215 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 125717811 Common leuA 2-isopropylmalate synthase, putative SSA_0975 216 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 125717717 Common - hypothetical protein SSA_0874 118 COG2855 COG2855, Predicted membrane protein Function unknown 125718591 Common yidC OxaA-like protein precursor SSA_1792 133 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 125718243 Common hflX HflX GTPase, putative SSA_1432 217 COG2262 HflX, GTPases General function prediction only 125717537 Common - DNA-binding protein HU, putative SSA_0683 205 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 125717530 Common xseB exodeoxyribonuclease VII small subunit SSA_0675 69 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 125717929 Common - Hemolysin exporter, ATPase component, putative SSA_1100 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 125718889 Pathogen - hypothetical protein SSA_2103 1 None None None 125717905 Common hemN coproporphyrinogen III oxidase SSA_1075 207 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 125718919 Common - Transcriptional repressor, DeoR family (possibly truncated), putative SSA_2135 22 COG2378 COG2378, Predicted transcriptional regulator Transcription 125718719 Common shetA Exfoliative toxin, putative SSA_1927 4 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 125716995 Common rplN 50S ribosomal protein L14 SSA_0117 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 125717471 Common gtfP Glucosyltransferase, putative SSA_0613 8 COG5263 COG5263, FOG: Glucan-binding domain (YG repeat) General function prediction only 125717644 Common uup ABC-NBD transporters with duplicated ATPase domains, putative SSA_0796 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 125717873 Common - Sugar ABC transporter, permease protein, putative SSA_1041 109 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 125718779 Pathogen phtA Pneumococcal histidine triad protein A, putative SSA_1991 1 None None None 125718210 Common - hypothetical protein SSA_1395 81 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 125719020 Common - hypothetical protein SSA_2241 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 125719138 Common - Immunodominant staphylococcal antigen A precursor, putative SSA_2364 14 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 125718793 Common - 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme, putative SSA_2006 4 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 125718110 Pathogen - hypothetical protein SSA_1293 1 None None None 125718598 Common - Acetyltransferase, putative SSA_1799 16 COG3153 COG3153, Predicted acetyltransferase General function prediction only 125718942 Common radA DNA repair protein RadA SSA_2157 216 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 125717541 Pathogen - hypothetical protein SSA_0687 1 None None None 125717790 Pathogen - hypothetical protein SSA_0952 1 None None None 125718881 Common sgaT ascorbate-specific PTS system enzyme IIC SSA_2093 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 125717900 Common lspA Lipoprotein signal peptidase, putative SSA_1069 195 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 125719083 Pathogen - hypothetical protein SSA_2305 1 None None None 125717878 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase SSA_1047 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 125717624 Common glgC glucose-1-phosphate adenylyltransferase SSA_0776 224 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 125718862 Pathogen yajC preprotein translocase subunit YajC SSA_2074 1 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 125718902 Common - Thiamine pyrophosphokinase, putative SSA_2118 42 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 125717398 Common - Propanediol utilization: dehydratase, medium subunit, putative SSA_0535 13 None None None 125716894 Common trcF Transcription-repair coupling factor, putative SSA_0008 233 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 125718991 Common pbp2a Penicillin-binding protein 2A, putative SSA_2209 204 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 125716909 Common aspC aromatic amino acid aminotransferase SSA_0023 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 125717758 Common - Cobalamin-independent methionine synthase II, putative SSA_0917 36 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 125718956 Common hipO Aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase, putative SSA_2173 165 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 125719143 Common - hypothetical protein SSA_2369 50 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 125718402 Pathogen - hypothetical protein SSA_1596 1 None None None 125718428 Common rplK 50S ribosomal protein L11 SSA_1623 247 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 125718426 Common - Amino acid transporter, putative SSA_1621 60 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 125717262 Common - Bacteriocin ABC-type exporter, ATP binding/permease protein, putative SSA_0393 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718186 Common - FmtA-like protein, putative SSA_1371 129 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125716979 Common - Conserved uncharacterized protein SSA_0101 122 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 125717414 Pathogen - hypothetical protein SSA_0554 1 None None None 125718608 Common ptsG PTS system glucose-specific EIIC BA component (EIICBA-Glc) (EII- Glc/EIII-Glc), putative SSA_1809 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 125717325 Common - Multiple antibiotic resistance operon transcription repressor (MarR), putative SSA_0460 26 COG1846 MarR, Transcriptional regulators Transcription 125719102 Pathogen - hypothetical protein SSA_2327 1 None None None 125717763 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_0923 20 COG1309 AcrR, Transcriptional regulator Transcription 125717666 Common - SPX domain-like protein, putative SSA_0818 15 COG5036 COG5036, SPX domain-containing protein involved in vacuolar polyphosphate accumulation Inorganic ion transport and metabolism 125718937 Common - ABC-type transporter (uncharacterized), ATPase component, putative SSA_2152 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 125717167 Common - hypothetical protein SSA_0293 11 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 125718626 Common glp Alpha-glycerophosphate oxidase, putative SSA_1827 148 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 125718547 Common ppx putative manganese-dependent inorganic pyrophosphatase SSA_1748 62 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 125718418 Common - hypothetical protein SSA_1613 191 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 125718619 Pathogen - hypothetical protein SSA_1820 1 None None None 125718059 Common - hypothetical protein SSA_1239 9 None None None 125718449 Common - hypothetical protein SSA_1645 9 COG1695 COG1695, Predicted transcriptional regulators Transcription 125716963 Pathogen - hypothetical protein SSA_0083 1 None None None 125717543 Common pbp2b Penicillin-binding protein 2B, putative SSA_0689 200 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 125716896 Common divIC Cell division protein DivIC, putative SSA_0010 1 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 125716946 Common - Low molecular weight phosphotyrosine protein phosphatase, putative SSA_0065 128 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 125717738 Common - Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative SSA_0896 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125717035 Pathogen - hypothetical protein SSA_0157 1 None None None 125717776 Common spxA transcriptional regulator Spx SSA_0937 65 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 125717934 Common rplL 50S ribosomal protein L7/ L12, putative SSA_1105 201 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 125718610 Common gnd 6-phosphogluconate dehydrogenase SSA_1811 183 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 125718064 Pathogen - hypothetical protein SSA_1244 1 None None None 125718338 Common gpm Phosphoglycerate mutase, putative SSA_1528 133 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125718953 Common galU Glucose-1-phosphate uridylyltransferase, putative SSA_2169 233 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 125718485 Common - Histidine kinase, putative SSA_1684 209 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 125718188 Common - ATPase components of ABC transporters with duplicated ATPase domains, multidrug transport system, putative SSA_1373 247 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 125718378 Common thrS threonyl-tRNA synthetase SSA_1571 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718303 Common - hypothetical protein SSA_1492 67 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 125717786 Pathogen - hypothetical protein SSA_0947 1 None None None 125719042 Common nrdI hypothetical protein SSA_2263 31 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 125718481 Common - ABC-type bacitracin resistance protein A, permease component, putative SSA_1680 17 None None None 125718743 Common pbp3 Penicillin-binding protein 3, putative SSA_1951 148 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 125717371 Pathogen - hypothetical protein SSA_0507 1 None None None 125717654 Pathogen - hypothetical protein SSA_0806 1 None None None 125717226 Common mutS2 DNA mismatch repair protein, putative SSA_0355 206 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 125718216 Common - Transcriptional regulator GntR family SSA_1401 164 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 125717091 Pathogen - hypothetical protein SSA_0213 1 None None None 125718410 Common secG preprotein translocase subunit SecG SSA_1604 2 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 125718564 Common - hypothetical protein SSA_2385 4 None None None 125717571 Common holA DNA polymerase III subunit delta SSA_0720 60 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 125717136 Common ssaB Manganese/Zinc ABC transporter substrate-binding lipoprotein precursor, putative SSA_0260 178 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 125718083 Pathogen - hypothetical protein SSA_1264 1 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 125718732 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III SSA_1940 228 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 125718395 Common - ABC-type antimicrobial peptide transport system, ATPase component, putative SSA_1589 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125719061 Common - Conserved uncharacterized protein SSA_2283 8 COG4842 COG4842, Uncharacterized protein conserved in bacteria Function unknown 125718453 Common - hypothetical protein SSA_1649 81 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 125717669 Common mscL Large conductance mechano-sensitive ion channel, putative SSA_0822 142 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 125718467 Common - Phosphatidylethanolamine N-methyltransferase, putative SSA_1664 91 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125717604 Common - hypothetical protein SSA_0755 7 COG4894 COG4894, Uncharacterized conserved protein Function unknown 125719034 Common - Transcriptional regulator, XRE family, putative SSA_2255 32 COG1476 COG1476, Predicted transcriptional regulators Transcription 125719118 Pathogen - hypothetical protein SSA_2344 1 None None None 125718095 Common - D-alanyl-D-alanine carboxypeptidase SSA_1277 33 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 125717928 Common - Calcium binding hemolysin-like protein, putative SSA_1099 82 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 125718725 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase SSA_1933 188 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 125718354 Common lgt prolipoprotein diacylglyceryl transferase SSA_1546 197 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 125717223 Common rnhC ribonuclease HIII SSA_0352 31 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 125717160 Common - fructose-6-phosphate aldolase SSA_0286 104 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 125717348 Common - Siroheme synthase, putative SSA_0483 90 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 125718651 Common luxS S-ribosylhomocysteine lyase, putative SSA_1853 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 125718865 Common - hypothetical protein SSA_2077 13 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 125718050 Pathogen - Conserved uncharacterized protein SSA_1230 3 None None None 125718846 Common rpsO 30S ribosomal protein S15 SSA_2058 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 125717707 Common - hypothetical protein SSA_0864 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 125718816 Common cadD1 Cadmium resistance transporter, putative SSA_2026 20 COG4300 CadD, Predicted permease, cadmium resistance protein Inorganic ion transport and metabolism 125717082 Common nisK NisK (sensor-receptor histidine kinase domain), putative SSA_0205 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 125718539 Pathogen - hypothetical protein SSA_1740 4 None None None 125717487 Common trpB2 tryptophan synthase subunit beta SSA_0631 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 125718374 Common - Polar amino acid ABC transporter, amino acid-binding protein, putative SSA_1567 184 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 125717689 Common - ABC-type multidrug transport system, ATPase component, putative SSA_0845 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717192 Common gcp O-sialoglycoprotein endopeptidase SSA_0318 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 125717079 Pathogen - hypothetical protein SSA_0202 1 None None None 125718318 Common rgpD ABC-type lipopolysaccharide transport system, ATPase component, putative SSA_1507 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 125718440 Pathogen - hypothetical protein SSA_1635 2 None None None 125718536 Common metB cystathionine gamma-synthase SSA_1737 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 125717535 Common pphA Serine/threonine protein phosphatase, putative SSA_0680 100 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 125718782 Common pyrG CTP synthetase SSA_1994 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 125718193 Common - hypothetical protein SSA_1378 55 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 125717274 Common - ABC-type multidrug transport system (3-component subtilin immunity exporter), ATPase component, putative SSA_0407 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717919 Pathogen - hypothetical protein SSA_1089 1 None None None 125717803 Common udK uridine kinase SSA_0966 78 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 125718790 Common truA tRNA pseudouridine synthase A SSA_2002 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 125718076 Common - NAD-dependent deacetylase SSA_1256 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 125717193 Common - Branched-chain amino acid permease (L-methionine, L-isoleucine, leucine and valine), putative SSA_0319 108 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 125719056 Common - DNA segregation ATPase FtsK/SpoIIIE family protein, putative SSA_2277 196 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 125718968 Common - bifunctional glutamate--cysteine ligase/glutathione synthetase SSA_2186 95 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 125717827 Common - Peptidase E, putative SSA_0994 16 COG3340 PepE, Peptidase E Amino acid transport and metabolism 125717293 Common - hypothetical protein SSA_0426 1 COG2339 COG2339, Predicted membrane protein Function unknown 125718043 Common - NTP pyrophosphohydrolases including oxidative damage repair enzymes, putative SSA_1222 17 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125718646 Common fmt methionyl-tRNA formyltransferase SSA_1848 216 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 125717383 Common - Ethanolamine ammonia-lyase large subunit, putative SSA_0519 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 125718819 Common - Transposase and inactivated derivatives, putative SSA_2029 57 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 125717619 Common nrdH Glutaredoxin-like protein, putative SSA_0771 35 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 125718874 Pathogen - hypothetical protein SSA_2086 2 None None None 125718142 Common pepT peptidase T SSA_1326 59 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 125719092 Pathogen - Conserved uncharacterized protein SSA_2315 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 125718151 Common - Ankyrin repeat protein, putative SSA_1335 10 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 125717599 Common coiA Competence protein, putative SSA_0749 13 COG4469 CoiA, Competence protein General function prediction only 125718681 Common - hypothetical protein SSA_1883 3 None None None 125718731 Common acpP acyl carrier protein SSA_1939 176 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 125718296 Common ccl Citrulline cluster-linked gene, putative SSA_1485 15 COG4708 COG4708, Predicted membrane protein Function unknown 125717700 Common - hypothetical protein SSA_0857 5 None None None 125717364 Common - ABC-type dipeptide transport system, periplasmic component, putative SSA_0499 212 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 125717184 Common - hypothetical protein SSA_0310 88 COG1309 AcrR, Transcriptional regulator Transcription 125717741 Common - Conserved permease, putative SSA_0899 213 COG0628 PerM, Predicted permease General function prediction only 125717067 Common - hypothetical protein SSA_0188 1 None None None 125718688 Common nagA N-acetylglucosamine-6-phosphate deacetylase, putative SSA_1893 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 125717976 Common tdk thymidine kinase SSA_1151 99 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 125719140 Common - ABC-type cobalt transport system, ATPase component, putative SSA_2366 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 125717960 Common tatA TatA, sec-independent protein secretion pathway component, putative SSA_1133 1 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 125717820 Common proW ABC-type choline transporter, membrane-spanning permease, putative SSA_0987 150 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 125717316 Common - Conserved uncharacterized protein SSA_0451 36 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 125718351 Pathogen - hypothetical protein SSA_1543 1 None None None 125717158 Common ptcC Phosphotransferase system (PTS), cellobiose-specific IIC component, putative SSA_0284 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 125717214 Common - hypothetical protein SSA_0341 37 COG2966 COG2966, Uncharacterized conserved protein Function unknown 125718575 Common trkA potassium transporter peripheral membrane component SSA_1775 144 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 125718101 Common nrd Nitroreductase, putative SSA_1283 127 COG0778 NfnB, Nitroreductase Energy production and conversion 125717847 Common - Phosphatidylserine decarboxylase proenzyme 2, putative SSA_1014 55 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 125718434 Common ppiA Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative SSA_1629 201 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 125718147 Common - Conserved uncharacterized protein SSA_1331 3 None None None 125718023 Common dfp phosphopantothenoylcysteine decarboxylase SSA_1202 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 125717005 Common rplO 50S ribosomal protein L15 SSA_0126 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 125718970 Common - Conserved uncharacterized protein SSA_2188 24 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 125718254 Common hisH imidazole glycerol phosphate synthase subunit HisH SSA_1444 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 125717498 Common pilD Type 4 prepilin peptidase, putative SSA_0642 70 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 125717336 Common - cobalamin biosynthesis protein CbiG SSA_0471 90 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 125717000 Pathogen - hypothetical protein SSA_0121 1 None None None 125718981 Common clpC ATP-dependent Clp protease, ATP-binding subunit, putative SSA_2199 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 125717523 Common - hypothetical protein SSA_0668 23 COG4832 COG4832, Uncharacterized conserved protein Function unknown 125716956 Common - ABC sugar transporter, permease protein, putative SSA_0075 167 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 125718031 Common - GTP pyrophosphokinase, putative SSA_1210 31 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 125717050 Common - Transcriptional regulator, XRE family, putative SSA_0172 18 COG1396 HipB, Predicted transcriptional regulators Transcription 125717483 Common - hypothetical protein SSA_0626 84 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 125718705 Common - Xanthine/uracil permease family protein, putative SSA_1913 137 COG2252 COG2252, Permeases General function prediction only 125718938 Common - ABC-type transporter (uncharacterized), permease component, putative SSA_2153 52 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 125718039 Common radC DNA repair protein RadC SSA_1218 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 125717797 Common ciaH Sensor protein ciaH, putative SSA_0960 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 125718857 Common proS prolyl-tRNA synthetase SSA_2069 242 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125717346 Common - cobyric acid synthase SSA_0481 153 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 125718850 Common - hypothetical protein SSA_2062 13 COG2261 COG2261, Predicted membrane protein Function unknown 125718569 Common - hypothetical protein SSA_1769 30 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 125717469 Common htpX heat shock protein HtpX SSA_0611 191 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 125717077 Common folK Bifunctional folate synthesis protein, putative SSA_0200 204 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 125716930 Common - NAD(P)H dehydrogenase (Quinone), putative SSA_0047 81 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 125717153 Common - Transcriptional repressor of sugar metabolism, GlpR/DeoR family, putative SSA_0278 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 125718322 Common - Glycosyltransferase, putative SSA_1511 117 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125718765 Common - ABC-type multidrug transport system, ATPase component, putative SSA_1975 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717713 Common ftsE Cell division protein FtsE, putative SSA_0870 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 125718283 Pathogen - hypothetical protein SSA_1472 2 None None None 125718168 Common - hypothetical protein SSA_1353 24 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 125717884 Common - pyruvate phosphate dikinase SSA_1053 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 125717588 Common sagP arginine deiminase SSA_0737 56 COG2235 ArcA, Arginine deiminase Amino acid transport and metabolism 125718005 Common - hypothetical protein SSA_1183 5 None None None 125717378 Common - PduQ protein, putative SSA_0514 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 125717782 Common pstC ABC transporter membrane-spanning permease-phosphate transport, putative SSA_0943 230 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 125717502 Common - hypothetical protein SSA_0647 55 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 125718589 Common - SpoU rRNA Methylase family protein, putative SSA_1790 206 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 125718666 Common - ABC-type arginine/histidine transport system, permease component, putative SSA_1868 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125717897 Common aliB ABC-type oligopeptide transport system, putative SSA_1066 121 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 125717438 Common nadD nicotinic acid mononucleotide adenyltransferase SSA_0578 171 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 125717460 Common - ABC-type cobalt transport system, ATPase component, putative SSA_0602 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 125718515 Common - Restriction endonuclease SsuRB, putative SSA_1716 10 None None None 125718191 Common pmrB Transport protein, putative SSA_1376 53 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 125717628 Common - Acid phosphatase (PAP2 family), putative SSA_0780 10 None None None 125718115 Common malF Maltose/maltodextrin ABC transport system, putative SSA_1299 142 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 125717037 Common - hypothetical protein SSA_0159 4 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 125717425 Common - hypothetical protein SSA_0565 16 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 125717030 Pathogen - hypothetical protein SSA_0152 2 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 125718824 Common rplM 50S ribosomal protein L13 SSA_2034 218 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 125718046 Common ilvE branched-chain amino acid aminotransferase SSA_1225 196 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 125717241 Common gdhA glutamate dehydrogenase SSA_0371 166 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 125717366 Common - Peptide ABC transporter, permease protein, putative SSA_0502 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 125719018 Common - Conserved uncharacterized cytosolic protein SSA_2239 15 COG3906 COG3906, Uncharacterized protein conserved in bacteria Function unknown 125717089 Common trxA2 hypothetical protein SSA_0211 94 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 125717042 Common - hypothetical protein SSA_0164 3 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 125718726 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SSA_1934 183 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 125718964 Pathogen - hypothetical protein SSA_2182 1 None None None 125718525 Common livG ABC transporter ATP-binding protein-branched chain amino acid transport, putative SSA_1726 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 125718787 Common - hypothetical protein SSA_1999 16 COG4475 COG4475, Uncharacterized protein conserved in bacteria Function unknown 162139838 Common pepV dipeptidase PepV SSA_1282 109 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 125717202 Common pepXP x-prolyl-dipeptidyl aminopeptidase SSA_0328 12 COG2936 COG2936, Predicted acyl esterases General function prediction only 125717009 Common rpmJ 50S ribosomal protein L36 SSA_2392 138 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 125718696 Common - hypothetical protein SSA_1903 9 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 125718807 Common - hypothetical protein SSA_2020 4 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 125717659 Common - hypothetical protein SSA_0811 95 COG0391 COG0391, Uncharacterized conserved protein Function unknown 125717869 Common cdd cytidine deaminase SSA_1037 117 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 125717754 Common - Acetyltransferase, putative SSA_0913 42 COG0456 RimI, Acetyltransferases General function prediction only 125718127 Common - Hydrolase, haloacid dehalogenase-like family, putative SSA_1311 61 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 125717756 Common - hypothetical protein SSA_0915 22 COG3272 COG3272, Uncharacterized conserved protein Function unknown 125718382 Common cpoA Glycosyl transferase, putative SSA_1575 89 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125718405 Pathogen - hypothetical protein SSA_1599 1 None None None 125717408 Common acpS 4'-phosphopantetheinyl transferase SSA_0547 111 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 125717946 Common - Peptide methionine sulfoxide reductase, putative SSA_1118 206 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 125719120 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III, putative SSA_2346 210 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 125716910 Common recO DNA repair protein RecO SSA_0025 24 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 125716993 Common rpmC 50S ribosomal protein L29 SSA_0115 153 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 125718389 Common ogt 6-O-methylguanine-DNA methyltransferase, putative SSA_1583 215 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 125717146 Common - Phosphotransferase system (PTS) cellobiose-specific, IIC component, putative SSA_0270 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 125717640 Pathogen - hypothetical protein SSA_0792 1 None None None 125718601 Common snf Snf2 family protein, putative SSA_1802 149 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 125717907 Common nagD N-acetyl-glucosamine matabolism, putative SSA_1077 103 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 125718157 Common carB carbamoyl phosphate synthase large subunit SSA_1341 234 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 125717473 Common rggD RggD, putative SSA_0615 4 None None None 125716967 Common ntpC V-type sodium ATPase, subunit C, putative SSA_0088 12 COG1527 NtpC, Archaeal/vacuolar-type H+-ATPase subunit C Energy production and conversion 125717646 Common - ABC transporter membrane-spanning permease-macrolide efflux, putative SSA_0798 29 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 125717875 Common hom homoserine dehydrogenase SSA_1043 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 125717267 Common - hypothetical protein SSA_0398 128 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125717440 Common - Isochorismatase family protein, putative SSA_0580 65 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 125718494 Common lacF PTS system, lactose-specific IIA component, putative SSA_1694 28 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 125717715 Common - Zn-dependent hydrolases, including glyoxylases, putative SSA_0872 203 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 125717594 Common queA S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine synthetase), putative SSA_0744 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 125718335 Common - Lyzozyme M1 (1,4-beta-N-acetylmuramidase), putative SSA_1525 7 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 125718365 Common - Hydrolase, HAD superfamily SSA_1558 130 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125718706 Pathogen - hypothetical protein SSA_1914 1 COG4330 COG4330, Predicted membrane protein Function unknown 125717013 Common rplQ 50S ribosomal protein L17 SSA_0133 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 125718052 Common parE DNA topoisomerase IV subunit B SSA_1232 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 125718993 Common - Transmembrane protein, putative SSA_2211 6 COG3274 COG3274, Uncharacterized protein conserved in bacteria Function unknown 125719145 Common - Zn-dependent peptidase, putative SSA_2371 100 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 125717695 Common - Cation efflux family protein, putative SSA_0851 204 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 125718550 Common dexS Dextran glucosidase, alpha amylase family, putative SSA_1751 165 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 125718582 Common - hypothetical protein SSA_1782 41 COG0622 COG0622, Predicted phosphoesterase General function prediction only 125718400 Common - Metalloendopeptidase, putative SSA_1594 64 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 125717553 Common - hypothetical protein SSA_0700 13 None None None 125717979 Common - hypothetical protein SSA_1154 239 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 125718112 Pathogen - hypothetical protein SSA_1296 1 None None None 125717862 Common - Transcriptional regulator, TetR family, putative SSA_1030 9 COG1309 AcrR, Transcriptional regulator Transcription 125717859 Common - hypothetical protein SSA_1027 4 None None None 125717433 Common - hypothetical protein SSA_0573 1 None None None 125718632 Common - hypothetical protein SSA_1833 4 None None None 125718958 Pathogen - hypothetical protein SSA_2175 1 None None None 125718223 Common rmlB DTDP-glucose-4,6-dehydratase, putative SSA_1409 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 125718447 Pathogen - hypothetical protein SSA_1643 1 None None None 125718204 Pathogen - hypothetical protein SSA_1389 1 None None None 125717391 Common pduL Propanediol utilization protein PduL SSA_0527 36 COG4869 PduL, Propanediol utilization protein Secondary metabolites biosynthesis, transport, and catabolism 125718512 Common - Arsenate reductase (ArsC), glutaredoxin family, putative SSA_1712 45 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 125719050 Pathogen - hypothetical protein SSA_2271 1 None None None 125719134 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase SSA_2360 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 125718833 Common cysS cysteinyl-tRNA synthetase SSA_2044 242 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125717514 Common - hypothetical protein SSA_0659 31 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 125717614 Common - hypothetical protein SSA_0766 18 None None None 125719153 Common comD Signal transduction protein with a C-terminal ATPase/histidine kinase domain, putative SSA_2379 18 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 125718508 Pathogen - hypothetical protein SSA_1708 1 None None None 125718949 Common oppA ABC-type oligopeptide transporter, periplasmic component, putative SSA_2165 146 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 125717993 Pathogen - hypothetical protein SSA_1170 1 None None None 125717176 Common pgk phosphoglycerate kinase SSA_0302 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 125718895 Common rpsG 30S ribosomal protein S7 SSA_2110 248 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 125717491 Common trpC indole-3-glycerol-phosphate synthase SSA_0635 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 125718258 Common hisZ ATP phosphoribosyltransferase regulatory subunit, putative SSA_1448 231 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 125718672 Common yorfE YorfE protein, putative SSA_1874 63 COG1476 COG1476, Predicted transcriptional regulators Transcription 125717608 Common argB acetylglutamate kinase SSA_0759 217 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 125717511 Common ftsZ cell division protein FtsZ SSA_0656 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 125717237 Common - hypothetical protein SSA_0367 5 COG5504 COG5504, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 125717677 Common secY preprotein translocase subunit SecY SSA_0832 216 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 125718814 Common - Arsenical resistance operon transcription repressor, putative SSA_2387 72 COG0640 ArsR, Predicted transcriptional regulators Transcription 125718924 Common rnpA Ribonuclease P protein component, putative SSA_2140 54 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 125718988 Pathogen - hypothetical protein SSA_2207 1 None None None 125717816 Common - Conserved uncharacterized protein SSA_0983 4 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 125718197 Pathogen - hypothetical protein SSA_1382 1 None None None 125717901 Common - Ribosomal large subunit pseudouridine synthase D, putative SSA_1070 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 125717961 Common xpt xanthine phosphoribosyltransferase SSA_1134 90 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 125717915 Common dapB dihydrodipicolinate reductase SSA_1085 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 125719156 Common htrA DegP protein, putative SSA_2381 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 125717954 Common nox H2O-forming NADH dehydrogenase, putative SSA_1127 244 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 125717784 Common pstB1 Phosphate import ATP-binding protein pstB 1, putative SSA_0945 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 125717128 Common - hypothetical protein SSA_0252 2 None None None 125717304 Common rpsF 30S ribosomal protein S6 SSA_0437 188 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 125717228 Common - Thioredoxin, putative SSA_0357 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 125718227 Common - GufA-like protein, putative SSA_1413 84 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 125718238 Common - Hydrolase, putative SSA_1424 41 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 125717832 Common birA biotin--protein ligase SSA_0999 194 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 125717924 Common - GTPase EngB SSA_1094 190 COG0218 COG0218, Predicted GTPase General function prediction only 125717387 Common - Aldehyde dehydrogenase, putative SSA_0523 202 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 125718261 Common rexA Exonuclease RexA, putative SSA_1451 228 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 125719022 Pathogen - Conserved uncharacterized protein SSA_2243 1 None None None 125718831 Common lrp Leucine-rich protein, putative SSA_2041 21 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 125718097 Common - Oxidoreductase, putative SSA_1279 176 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 125719078 Pathogen - hypothetical protein SSA_2300 1 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 125718455 Common - hypothetical protein SSA_1651 5 None None None 125719105 Common - Acetyltransferase, putative SSA_2330 17 None None None 125717991 Pathogen - hypothetical protein SSA_1168 1 None None None 125718770 Common - hypothetical protein SSA_1981 7 None None None 125718612 Pathogen - hypothetical protein SSA_1813 1 None None None 125717111 Pathogen - hypothetical protein SSA_0234 1 COG3247 HdeD, Uncharacterized conserved protein Function unknown 125718461 Common - Cationic amino acid transporter, putative SSA_1658 150 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 125717134 Common - hypothetical protein SSA_0258 4 None None None 125718754 Common - Amino acid ABC transporter, ATP-binding protein, putative SSA_1962 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 125718758 Common ilvC ketol-acid reductoisomerase SSA_1968 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 125718468 Pathogen - hypothetical protein SSA_1665 1 None None None 125718218 Common - Multidrug ABC transporter, ATPase and permease components, putative SSA_1403 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718863 Common tkt transketolase SSA_2075 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 125717351 Common hemD uroporphyrinogen-III synthase SSA_0486 22 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 125718501 Common lacR Transcriptional repressor of sugar metabolism, GlpR/DeoR family, putative SSA_1701 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 125717942 Common - Histidine kinase, putative SSA_1114 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 125718844 Common - hypothetical protein SSA_2055 8 None None None 125718421 Common phoH PhoH-like protein, putative SSA_1616 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 125718614 Common - hypothetical protein SSA_1815 2 None None None 125717761 Common adhB Zn-dependeant threonine dehydrogenase, putative SSA_0921 206 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 125717533 Common ahrC Transcriptional regulator, ArgR family, putative SSA_0678 47 COG1438 ArgR, Arginine repressor Transcription 125717834 Common msmR Arabinose (multiple sugar metabolism) operon transcriptional regulator, putative SSA_1001 122 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 125717412 Common - Cof family protein, putative SSA_0552 125 COG4696 COG4696, Uncharacterized protein conserved in bacteria Function unknown 125718492 Common lacG Phospho-B-galactosidase LacG, putative SSA_1692 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 125718364 Common ftsY SRPR, signal recognition particle-docking protein, putative SSA_1557 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 125717660 Common - hypothetical protein SSA_0812 54 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 125716970 Common ntpA V-type ATP synthase subunit A SSA_0091 247 COG1155 NtpA, Archaeal/vacuolar-type H+-ATPase subunit A Energy production and conversion 125717264 Common arb 6-phospho-beta-glucosidase SSA_0395 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 125718679 Pathogen - hypothetical protein SSA_1881 2 None None None 125719044 Common malP Maltodextrin phosphorylase, putative SSA_2265 144 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 125718483 Common - hypothetical protein SSA_1682 7 None None None 125718384 Common pepQ Proline dipeptidase, putative SSA_1577 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 125716902 Common comX ComX1, transcriptional regulator of competence-specific genes, putative SSA_0016 3 None None None 125719029 Common - ABC-type antimicrobial peptide transporter, permease component, putative SSA_2250 2 COG4652 COG4652, Uncharacterized protein conserved in bacteria Function unknown 125717151 Common - Glycosyltransferase, family 2/glycosyltransferase family 8, putative SSA_0276 219 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125717983 Common - hypothetical protein SSA_1158 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 125717948 Common - Two-component sensor kinase (with C-terminal ATPase domain), putative SSA_1120 117 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 125718860 Common cdsA Phosphatidate cytidylyltransferase, putative SSA_2072 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 125718279 Common aroB 3-dehydroquinate synthase SSA_1468 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 125717778 Common suhB Inositol monophosphatase (Mg++ dependent), putative SSA_0939 185 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 125718069 Common - hypothetical protein SSA_1249 31 COG1337 COG1337, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 125717768 Common - ABC-type multidrug transporter, ATPase and permease components, putative SSA_0928 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125717567 Common - hypothetical protein SSA_0714 3 None None None 125718883 Common clpL ATP-dependent protease, ATP-binding subunit, putative SSA_2096 243 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 125718686 Common - Oxidoreductase, aldo/keto reductase family, putative SSA_1891 196 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 125717606 Common argC N-acetyl-gamma-glutamyl-phosphate reductase SSA_0757 216 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 125718301 Common - Ribonuclease BN, putative SSA_1490 67 COG1295 Rbn, Predicted membrane protein Function unknown 125718717 Common serS seryl-tRNA synthetase SSA_1925 246 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 125717725 Common serB Phosphoserine phosphatase, putative SSA_0882 159 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 125718013 Pathogen - hypothetical protein SSA_1191 1 None None None 125718416 Common era GTP-binding protein Era SSA_1611 236 COG1159 Era, GTPase General function prediction only 125717102 Common groES co-chaperonin GroES SSA_0225 170 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 125718540 Common - ABC-type Fe3+-siderophores transporter, ATPase component, putative SSA_1741 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 125717639 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase SSA_0791 218 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 125718497 Common lacC Tagatose-6-phosphate kinase, putative SSA_1697 101 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 125719040 Common - Transcriptional repressor (arginine synthesis), putative SSA_2261 63 COG1438 ArgR, Arginine repressor Transcription 125717427 Common - Isochorismitase family protein, putative SSA_0567 121 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 125718415 Common - hypothetical protein SSA_1610 95 COG3177 COG3177, Uncharacterized conserved protein Function unknown 125717319 Common scrR Lactose operon transcriptional repressor, LacI family, putative SSA_0454 129 COG1609 PurR, Transcriptional regulators Transcription 125717323 Common - peptide deformylase SSA_0458 177 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 125718268 Common dexB Neopullulanase, putative SSA_1457 176 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 125717854 Common - Conserved uncharacterized protein SSA_1021 84 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 125718398 Common - hypothetical protein SSA_1592 2 COG2339 COG2339, Predicted membrane protein Function unknown 125717825 Common - hypothetical protein SSA_0992 35 COG2320 GrpB, Uncharacterized conserved protein Function unknown 125717069 Pathogen - hypothetical protein SSA_0190 1 None None None 125716977 Common - hypothetical protein SSA_0099 2 None None None 125718392 Common - hypothetical protein SSA_1586 58 COG1959 COG1959, Predicted transcriptional regulator Transcription 125718138 Common - Glycosyl transferase, putative SSA_1322 11 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 125718655 Common - Conserved DivIVA-like protein, putative SSA_1857 11 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 125718315 Common - hypothetical protein SSA_1504 1 None None None 125718135 Common - hypothetical protein SSA_1319 143 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125718826 Common - Conserved hypothetical cytosolic protein SSA_2036 26 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 125718577 Common rluB Ribosomal large subunit pseudouridine synthase B, putative SSA_1777 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 125718487 Common - hypothetical protein SSA_1686 5 COG3319 COG3319, Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases Secondary metabolites biosynthesis, transport, and catabolism 125719147 Common recF recombination protein F SSA_2373 172 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 125717680 Common - Accessory secretory protein Asp3, putative SSA_0835 5 None None None 125716917 Common purN phosphoribosylglycinamide formyltransferase SSA_0033 220 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 125718549 Common - Extracellular nuclease, putative SSA_1750 45 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 125718872 Common - Phosphotransferase system (PTS), galactitol-specific IIC component, putative SSA_2084 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 125718734 Common phaB enoyl-CoA hydratase SSA_1942 171 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 125718995 Common - Nucleotide sugar dehydratase, putative SSA_2213 218 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 125717548 Common - hypothetical protein SSA_0695 1 COG5522 COG5522, Predicted integral membrane protein Function unknown 125719116 Common - SPX domain-like protein, putative SSA_2342 12 COG5036 COG5036, SPX domain-containing protein involved in vacuolar polyphosphate accumulation Inorganic ion transport and metabolism 125718478 Common - Transcriptional regulator, LytTr family, putative SSA_1676 18 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 125717480 Common - hypothetical protein SSA_0623 2 None None None 125718773 Common - hypothetical protein SSA_1985 24 COG5406 COG5406, Nucleosome binding factor SPN, SPT16 subunit Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics 125719089 Pathogen - hypothetical protein SSA_2312 1 None None None 125717186 Common - Hydrolase, metallo-beta-lactamase superfamily, putative SSA_0312 163 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 125716937 Common - Phosphotransferase system sugar-specific EIIB component, putative SSA_0054 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 125718122 Common trkA2 Trk transporter NAD+ binding protein-K+ transport, putative SSA_1306 119 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 125716968 Common ntpG V-type ATP synthase subunit F SSA_0089 8 COG1436 NtpG, Archaeal/vacuolar-type H+-ATPase subunit F Energy production and conversion 125717597 Common dacA DD-carboxypeptidase, putative SSA_0747 144 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 125718290 Common - Transposase, putative SSA_1479 36 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 125719090 Pathogen - hypothetical protein SSA_2313 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 125717023 Common - Transcriptional regulator, TetR family, putative SSA_0144 5 COG1309 AcrR, Transcriptional regulator Transcription 125717698 Common cysD O-acetylhomoserine sulfhydrylase, putative SSA_0855 207 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 125717301 Common - Glutamate formiminotransferase, putative SSA_0434 22 COG3643 COG3643, Glutamate formiminotransferase Amino acid transport and metabolism 125716985 Common rplC 50S ribosomal protein L3 SSA_0107 249 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 125717219 Common - CAAX amino terminal protease family, putative SSA_0348 27 None None None 125717623 Common glgB glycogen branching enzyme SSA_0775 151 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 125717080 Pathogen - hypothetical protein SSA_0203 1 None None None 125718917 Common - 3-methyladenine DNA glycosylase, putative SSA_2133 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 125717489 Common trpG anthranilate synthase component II SSA_0633 237 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 125718209 Pathogen - hypothetical protein SSA_1394 1 None None None 125718180 Common - FmtA-like protein, putative SSA_1365 126 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125717290 Pathogen - hypothetical protein SSA_0423 1 None None None 125716944 Common ruvB Holliday junction DNA helicase B SSA_0063 222 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 125716961 Pathogen blpT Superfamily I DNA and RNA helicases, putative SSA_0080 1 None None None 125717314 Common pepP Aminopeptidase P; XAA-pro aminopeptidase, putative SSA_0449 245 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 125718530 Common clpP ATP-dependent Clp protease proteolytic subunit SSA_1731 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 125718376 Common - ABC transporter membrane-spanning permease, arginine/histidine transport, putative SSA_1569 180 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125717674 Pathogen srpA Platelet-binding glycoprotein SSA_0829 2 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 125717974 Common - Glycosyl hydrolase, family 1, putative SSA_1149 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 125718797 Common - ABC-type multidrug transport system, permease component, putative SSA_2010 3 None None None 125717165 Common - short chain dehydrogenase SSA_0291 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 125718298 Common - Conserved uncharacterized protein SSA_1487 41 COG3382 COG3382, Uncharacterized conserved protein Function unknown 125717443 Common - Nucleotidyltransferase, putative SSA_0583 26 COG1323 COG1323, Predicted nucleotidyltransferase General function prediction only 125717212 Common mvaS Hydroxymethylglutaryl-CoA synthase, putative SSA_0338 66 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 125717936 Common - Lipid/multidrug/protein-type ABC exporter, ATP binding/membrane-spanning protein, putative SSA_1107 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718173 Common - hypothetical protein SSA_1358 27 None None None 125717467 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_0609 118 COG1309 AcrR, Transcriptional regulator Transcription 125717116 Common - Acetyltransferase, GNAT family, putative SSA_0240 9 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 125717338 Common - Precorrin-6x reductase, putative SSA_0473 80 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 125718117 Common - Conserved uncharacterized protein, possible surface protein SSA_1301 2 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 125717190 Common - hypothetical protein SSA_0316 184 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 125718048 Common - Aminoglycoside adenylyltransferase, putative SSA_1227 10 None None None 125717291 Common - Exopolysaccharide biosynthesis protein, putative SSA_0424 29 COG4632 EpsL, Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase Carbohydrate transport and metabolism 125717195 Common ubiE Methylase, putative SSA_0321 50 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125718212 Common - hypothetical protein SSA_1397 5 None None None 125717521 Pathogen - hypothetical protein SSA_0666 1 None None None 125717617 Pathogen - hypothetical protein SSA_0769 1 None None None 125717562 Common epsH Exopolysaccharide biosynthesis protein, acetyltransferase, putative SSA_0710 146 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 125718572 Common - hypothetical protein SSA_1772 126 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 125718256 Common hisD Histidinol dehydrogenase, putative SSA_1446 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 125718140 Common - Ceramide glucosyltransferase, putative SSA_1324 5 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125718202 Common - hypothetical protein SSA_1387 8 COG4495 COG4495, Uncharacterized protein conserved in bacteria Function unknown 125718905 Common - Cell wall surface anchor family protein, putative SSA_2121 21 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125717638 Pathogen - hypothetical protein SSA_0790 1 None None None 125718634 Common comFC Late competence protein, putative SSA_1835 65 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 125717053 Common mrcB Membrane carboxypeptidase (penicillin-binding protein), putative SSA_0134 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 125718510 Common - Transcriptional regulator, XRE family, putative SSA_1710 23 COG1476 COG1476, Predicted transcriptional regulators Transcription 125717122 Common - Conserved uncharacterized protein SSA_0246 2 None None None 125717858 Common - ABC-type multidrug transporter, ATPase component, putative SSA_1026 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717899 Common - Transcriptional regulator, LysR family (capsular polysaccharide biosynthesis regulation), putative SSA_1068 183 COG0583 LysR, Transcriptional regulator Transcription 125717177 Common sspC surface protein C SSA_0303 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 125717552 Common - Methyltransferase, putative SSA_0699 4 None None None 125718341 Common salX ABC-type antimicrobial peptide transporter, ATPase component, putative SSA_1531 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125717142 Common - ORFB, transposon ISSsa1 SSA_0266 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 125717910 Common fruR Transcriptional repressor of the fructose operon, DeoR family, putative SSA_1080 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 125717903 Common proA gamma-glutamyl phosphate reductase SSA_1073 188 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 125718154 Pathogen - hypothetical protein SSA_1338 1 None None None 125718885 Common - ABC-type arginine/histidine transporter, permease protein, putative SSA_2098 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125717275 Pathogen - hypothetical protein SSA_0408 1 None None None 125717791 Pathogen - hypothetical protein SSA_0954 1 None None None 125717692 Common pykF pyruvate kinase SSA_0848 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 125719070 Common - DNA segregation ATPase FtsK/SpoIIIE-like protein, putative SSA_2292 14 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 125718214 Common - hypothetical protein SSA_1399 5 COG4720 COG4720, Predicted membrane protein Function unknown 125717967 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 SSA_1140 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 125717137 Common ssaC ABC-type Mn2+/Zn2+ transport systems, permease component, putative SSA_0261 187 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 125717245 Common - ABC-type methionine transporter, ATPase component, putative SSA_0376 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 125718799 Common - hypothetical protein SSA_2012 5 None None None 125717056 Common rpoC DNA-directed RNA polymerase subunit beta' SSA_0177 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 125717374 Common - L-threonine-O-3-phosphate decarboxylase, putative SSA_0510 233 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 125717431 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B SSA_0571 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 125718562 Common - ABC-type molybdenum transport system, ATPase component, putative SSA_1763 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 125718444 Pathogen - hypothetical protein SSA_1640 1 None None None 125717959 Common tatC TatC, sec-independent protein translocase, putative SSA_1132 204 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 125716986 Common rplD 50S ribosomal protein L4 SSA_0108 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 125717917 Common - ABC-type transporter (antibiotic resistance protein), ATPase component, putative SSA_1087 246 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 125718978 Common - Conserved uncharacterized protein SSA_2196 4 None None None 125717889 Common thiI thiamine biosynthesis protein ThiI SSA_1058 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 125718983 Pathogen - hypothetical protein SSA_2201 1 None None None 125717752 Common - hypothetical protein SSA_0911 10 COG1511 COG1511, Predicted membrane protein Function unknown 125719142 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative SSA_2368 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 125718812 Common - Conserved hypothetical GTPase protein SSA_2025 14 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 125719091 Pathogen - hypothetical protein SSA_2314 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 125717759 Pathogen - Conserved uncharacterized protein SSA_0918 1 None None None 125718836 Pathogen - hypothetical protein SSA_2047 1 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 125718972 Common hslO Hsp33-like chaperonin SSA_2190 125 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 125718594 Common - Guanosine 3',5'-bis-pyrophosphate (ppGpp) synthetase, putative SSA_1795 45 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 125717925 Common mur2 Peptidoglycan hydrolase, putative SSA_1095 29 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 125716939 Common - Phosphotransferase system sugar-specific EIID component, putative SSA_0056 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 125717838 Common msmG Sugar ABC transporter, permease protein, putative SSA_1005 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 125717631 Common uncB F0F1 ATP synthase subunit A SSA_0783 193 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 125718248 Common - Acetyltransferase, putative SSA_1438 31 COG0456 RimI, Acetyltransferases General function prediction only 125717682 Common - Glucosyltransferase, putative SSA_0837 135 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125718327 Common - Cell-wall biogenesis glycosyltransferase, putative SSA_1516 173 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 125718260 Common - hypothetical protein SSA_1450 3 None None None 125718003 Common - Hydrolase, alpha/beta superfamily, putative SSA_1181 36 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 125717815 Common leuD isopropylmalate isomerase small subunit SSA_0981 212 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 125718244 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase SSA_1433 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 125717992 Common - Conserved hypothetical protein with an alpha/beta hydrolase fold, putative SSA_1169 9 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 125719013 Common - Heme/copper-type cytochrome/quinol oxidases, subunit 1, putative SSA_2231 2 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 125717233 Common dagA D-alanine/glycine/Na permease, putative SSA_0363 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 125719021 Pathogen - hypothetical protein SSA_2242 1 None None None 125718172 Common - hypothetical protein SSA_1357 36 None None None 125719014 Pathogen - hypothetical protein SSA_2233 1 None None None 125717882 Common potD Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein, putative SSA_1051 136 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 125717028 Pathogen - hypothetical protein SSA_0150 1 None None None 125717860 Common - Transcriptional repressor, XRE family, putative SSA_1028 4 COG2932 COG2932, Predicted transcriptional regulator Transcription 125718015 Common dapA dihydrodipicolinate synthase SSA_1193 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 125719151 Common - ABC transporter, permease component (possible copper exporter), putative SSA_2377 11 COG4485 COG4485, Predicted membrane protein Function unknown 125717870 Common - Lipoprotein, putative SSA_1038 81 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 125717651 Common - hypothetical protein SSA_0803 13 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 125718314 Common fer Ferredoxin, putative SSA_1503 4 COG1141 Fer, Ferredoxin Energy production and conversion 125718149 Common - hypothetical protein SSA_1333 6 None None None 125718556 Pathogen - hypothetical protein SSA_1757 1 None None None 125718946 Common - NTP pyrophosphohydrolases including oxidative damage repair enzymes, putative SSA_2161 19 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125717648 Common cobQ Glutamine amidotransferase, putative SSA_0800 63 COG3442 COG3442, Predicted glutamine amidotransferase General function prediction only 125717867 Common pdp pyrimidine-nucleoside phosphorylase SSA_1035 128 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 125717021 Pathogen - hypothetical protein SSA_0142 1 None None None 125717410 Common recG ATP-dependent DNA helicase recG, transcription-repair coupling factor, putative SSA_0549 237 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 125717421 Common - RNA:NAD 2'-phosphotransferase, putative SSA_0561 43 COG1859 KptA, RNA:NAD 2'-phosphotransferase Translation, ribosomal structure and biogenesis 125717017 Common adcA Metal-binding (Zn) permease, putative SSA_0138 179 COG3443 COG3443, Predicted periplasmic or secreted protein General function prediction only 125717044 Pathogen - hypothetical protein SSA_0166 1 None None None 125718542 Common fhuB ABC-type Fe3+-siderophore transport system, permease component, putative SSA_1743 157 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 125718676 Common - hypothetical protein SSA_1878 18 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 125718810 Common - Fructan beta-fructosidase precursor, putative SSA_2023 49 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 125718044 Common rpsA 30S ribosomal protein S1 SSA_1223 236 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 125717522 Common - Transcriptional regulator, putative SSA_0667 102 COG2378 COG2378, Predicted transcriptional regulator Transcription 125717209 Common mvaK2 Phosphomevalonate kinase, putative SSA_0335 18 COG1577 ERG12, Mevalonate kinase Lipid metabolism 125718000 Common acoA Acetoin dehydrogenase, E1 component, alpha subunit, putative SSA_1178 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 125717662 Common - pyridine nucleotide-disulfide oxidoreductase SSA_0814 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 125719016 Pathogen - Conserved uncharacterized protein SSA_2235 1 None None None 125718629 Common - Aminoglycoside phosphotransferase, putative SSA_1830 14 COG3231 Aph, Aminoglycoside phosphotransferase Translation, ribosomal structure and biogenesis 125716926 Common - hypothetical protein SSA_0043 1 None None None 125718622 Common - hypothetical protein SSA_1823 25 COG2461 COG2461, Uncharacterized conserved protein Function unknown 125717200 Common - hypothetical protein SSA_0326 40 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 125717354 Common cobU Adenosylcobinamide kinase / adenosylcobinamide phosphate guanyltransferase, putative SSA_0489 127 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 125718801 Common - D-alanyl-D-alanine carboxypeptidase, putative SSA_2014 34 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 125716919 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase SSA_0035 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 125717010 Common rpsM 30S ribosomal protein S13 SSA_0130 241 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 125717426 Common codY transcriptional repressor CodY SSA_0566 20 COG4465 CodY, Pleiotropic transcriptional repressor Transcription 125717453 Common - hypothetical protein SSA_0593 111 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 125717804 Common - hypothetical protein SSA_0967 20 COG3619 COG3619, Predicted membrane protein Function unknown 125718952 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase SSA_2168 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 125717271 Common - CAAX amino terminal protease family, putative SSA_0403 29 None None None 125717586 Common - Integral membrane protein, putative SSA_0735 7 None None None 125718499 Common lacA galactose-6-phosphate isomerase subunit LacA SSA_1699 120 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 125718985 Common rpsB 30S ribosomal protein S2 SSA_2203 247 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 125716976 Common - Hydrolase, haloacid dehalogenase-like family, putative SSA_0098 92 COG0546 Gph, Predicted phosphatases General function prediction only 125718121 Common - hypothetical protein SSA_1305 8 None None None 125717104 Common - Collagen-binding surface protein, putative SSA_0227 12 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125717997 Common acoL Dihydrolipoamide dehydrogenase, putative SSA_1174 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 125718994 Pathogen - Possible polysaccharide transport protein, putative SSA_2212 4 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 125717376 Common - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, putative SSA_0512 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 125719126 Common - ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic component, putative SSA_2352 108 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 125718871 Common - hypothetical protein SSA_2083 11 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 125717269 Common - Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative SSA_0401 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125718526 Common livM ABC transporter membrane-spanning permease-branched chain amino acid transport, putative SSA_1727 164 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 125718584 Common murI glutamate racemase SSA_1784 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 125718252 Common hisF Imidazole glycerol-phosphate synthase subunit hisF, putative SSA_1442 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 125717711 Common - hypothetical protein SSA_0868 7 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 125717284 Common metF 5,10-methylenetetrahydrofolate reductase, putative SSA_0417 147 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 125718693 Common nusA transcription elongation factor NusA SSA_1900 221 COG0195 NusA, Transcription elongation factor Transcription 125717760 Pathogen - hypothetical protein SSA_0920 1 None None None 125718280 Common aroE shikimate 5-dehydrogenase SSA_1469 225 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 125718767 Common - Dihydroxyacetone kinase family protein (Dak2 domain), putative SSA_1978 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 125717401 Common pduH PduH protein, putative SSA_0538 9 None None None 125717106 Pathogen - hypothetical protein SSA_0229 1 None None None 125717474 Common - YlbN-like protein, putative SSA_0616 7 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 125717496 Common - hypothetical protein SSA_0640 55 COG2378 COG2378, Predicted transcriptional regulator Transcription 125718648 Common rpoZ DNA-directed RNA polymerase subunit omega SSA_1850 14 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 125717270 Common - Histidine kinase, putative SSA_0402 183 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 125717341 Common - cobalt-precorrin-2 C(20)-methyltransferase SSA_0476 140 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 125717075 Common - Dihydrofolate synthetase, putative SSA_0198 217 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 125717893 Common rpmA 50S ribosomal protein L27 SSA_1062 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 125717944 Pathogen - hypothetical protein SSA_1116 1 None None None 125718054 Common - 5'-nucleotidase, putative SSA_1234 132 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 125718367 Common smc Structural maintenance of chromosome protein (chromosome segregation ATPase), putative SSA_1560 234 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 125717306 Common rpsR 30S ribosomal protein S18 SSA_0440 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 125717563 Common - hypothetical protein SSA_0709 81 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 125717705 Common murM MurM, putative SSA_0862 21 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 125719115 Common - hypothetical protein SSA_2340 68 None None None 125718849 Common def peptide deformylase SSA_2061 211 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 125717890 Common - hypothetical protein SSA_1059 22 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 125718567 Common - Bacitracin ABC transporter, ATP-binding protein, putative SSA_1767 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125718036 Common - hypothetical protein SSA_1215 1 None None None 125718355 Common ptsK HPr kinase/phosphorylase SSA_1547 75 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 125717258 Common - hypothetical protein SSA_0389 99 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125718842 Common - hypothetical protein SSA_2053 1 None None None 125718682 Common - Conserved uncharacterized protein SSA_1884 3 None None None 125717061 Common - Endoglucanase, putative SSA_0182 28 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 125717287 Common - Hydrolase, HAD superfamily, putative SSA_0420 100 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125717166 Common - Transcriptional regulator, AraC family (arabinose operon control), putative SSA_0292 67 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 125717823 Common - hypothetical protein SSA_0990 13 None None None 125718786 Common tig trigger factor SSA_1998 213 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 125717612 Common - Transcription repressor, putative SSA_0763 5 None None None 125718963 Pathogen - Conserved uncharacterized protein SSA_2181 1 None None None 125717097 Common - PTS system, sugar-specific enzyme IIA component, putative SSA_0219 12 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 125717981 Common - hypothetical protein SSA_1156 6 None None None 125718362 Common - hypothetical protein SSA_1554 9 COG3689 COG3689, Predicted membrane protein Function unknown 125718795 Common grpE Molecular chaperone GrpE (HSP-70 cofactor), putative SSA_2008 228 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 125719124 Common rpsD 30S ribosomal protein S4 SSA_2350 249 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 125718748 Common - ABC-type Fe-S cluster assembly transporter, ATPase component, putative SSA_1956 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 125717086 Common - Conserved uncharacterized protein SSA_0208 7 COG4868 COG4868, Uncharacterized protein conserved in bacteria Function unknown 125718532 Pathogen - hypothetical protein SSA_1733 1 None None None 125717988 Common - Transcriptional regulator, GntR family, putative SSA_1165 130 COG2188 PhnF, Transcriptional regulators Transcription 125718490 Pathogen - hypothetical protein SSA_1690 1 None None None 125718586 Common lysA Diaminopimelate decarboxylase, putative SSA_1787 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 125717360 Common - ABC-type oligopeptide/nickel transport system, ATPase component, putative SSA_0495 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 125718070 Common - Conserved uncharacterized protein, putative SSA_1250 4 COG1421 COG1421, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 125718386 Common - ABC-type Fe3+-siderophore transport system, ATPase component, putative SSA_1579 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 125718038 Common - Conserved uncharacterized protein SSA_1217 115 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 125718828 Common - hypothetical protein SSA_2038 9 COG4129 COG4129, Predicted membrane protein Function unknown 125717676 Common - hypothetical protein SSA_0831 9 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125716900 Common hpt Hypoxanthine guanine phosphoribosyltransferase, putative SSA_0014 152 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 125717745 Common crpA CshA-like fibrillar surface protein A SSA_0904 50 None None None 125717843 Common galE UDP-glucose 4-epimerase, putative SSA_1010 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 125718535 Common - L-cysteine desulfhydrase, putative SSA_1736 228 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 125718146 Common - hypothetical protein SSA_1330 1 None None None 125717197 Common - Flavoprotein, putative SSA_0323 142 COG2081 COG2081, Predicted flavoproteins General function prediction only 125718102 Common - hypothetical protein SSA_1284 9 COG5620 COG5620, Uncharacterized conserved protein Function unknown 125717609 Common - acetylornithine aminotransferase SSA_0760 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 125718684 Common - Conserved uncharacterized protein SSA_1889 2 None None None 125717140 Common - PEP phosphonomutase-like protein, putative SSA_0264 12 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 125718674 Pathogen - hypothetical protein SSA_1876 1 None None None 125717298 Common - hypothetical protein SSA_0431 5 COG3758 COG3758, Uncharacterized protein conserved in bacteria Function unknown 125719113 Common - Conserved uncharacterized protein SSA_2338 19 None None None 125717159 Common - Formate acetyltransferase 3, putative SSA_0285 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 125718236 Pathogen - hypothetical protein SSA_1422 1 None None None 125718118 Common trmD tRNA (guanine-N(1)-)-methyltransferase SSA_1302 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 125717317 Common nusB transcription antitermination protein NusB SSA_0452 176 COG0781 NusB, Transcription termination factor Transcription 125717118 Common - hypothetical protein SSA_0242 177 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 125718292 Common - FmtA-like protein, putative SSA_1481 134 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125718579 Common scpA segregation and condensation protein A SSA_1779 139 COG1354 COG1354, Uncharacterized conserved protein Function unknown 125717930 Common - Multidrug resistance efflux pump/hemolysin secretion transmembrane protein, putative SSA_1101 138 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 125718710 Common - Phosphotransferase system, mannose-specific EIIAB, putative SSA_1918 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 125719008 Common nrdG Organic radical activating chaperone, putative SSA_2226 65 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 125717180 Common glnR Transcription regulator (glutamine synthetase repressor), putative SSA_0306 37 COG0789 SoxR, Predicted transcriptional regulators Transcription 125717419 Pathogen - hypothetical protein SSA_0559 2 None None None 125719107 Common dltC D-alanine--poly(phosphoribitol) ligase subunit 2 SSA_2332 12 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 125717368 Common amiF Peptide ABC transporter, ATP-binding protein, putative SSA_0504 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 125717734 Pathogen - ATP-binding cassette lipoprotein, putative SSA_0892 1 None None None 125717971 Common ptcA Phosphotransferase system cellobiose-specific component IIA, putative SSA_1146 28 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 125717187 Common - Conserved uncharacterized protein SSA_0313 11 COG5503 COG5503, Uncharacterized conserved small protein Function unknown 125717406 Common aroG phospho-2-dehydro-3-deoxyheptonate aldolase SSA_0544 108 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 125718775 Common - hypothetical protein SSA_1987 34 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 125718375 Common - ABC transporter membrane-spanning permease, arginine/histidine transport, putative SSA_1568 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125717468 Common lemA LemA-like protein, putative SSA_0610 131 COG1704 LemA, Uncharacterized conserved protein Function unknown 125718028 Common eutD phosphotransacetylase SSA_1207 167 COG0280 Pta, Phosphotransacetylase Energy production and conversion 125717937 Common - ABC transporter ATP binding/permease protein, putative SSA_1109 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125717546 Common murF D-Ala-D-Ala adding enzyme, putative SSA_0692 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 125718390 Common - Ring-cleavage extradiol dioxygenase, putative SSA_1584 40 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 125717685 Pathogen - hypothetical protein SSA_0841 1 None None None 125717312 Common - Magnesium and cobalt transporter, putative SSA_0447 67 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 125717740 Pathogen - hypothetical protein SSA_0898 1 None None None 125719047 Common pulA Type II secretory pathway, pullulanase PulA glycosidase, putative SSA_2268 143 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 125717539 Common - hypothetical protein SSA_0685 2 None None None 125717001 Common rplF 50S ribosomal protein L6 SSA_0122 243 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 125718910 Common tatD hypothetical protein SSA_2126 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 125717217 Pathogen - hypothetical protein SSA_0345 1 None None None 125719130 Common dnaC replicative DNA helicase SSA_2356 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 125717532 Common hlyA rRNA methylase, putative SSA_0677 131 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 125718079 Common punA purine nucleoside phosphorylase SSA_1259 150 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 125718423 Common - hypothetical protein SSA_1618 39 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 125717012 Common rpoA DNA-directed RNA polymerase subunit alpha SSA_0132 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 125717528 Common - hypothetical protein SSA_0673 210 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 125719097 Common czcD Cation (Co/Zn/Cd) efflux protein, putative SSA_2321 198 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 125717393 Common - Ethanolamine utilization protein, putative SSA_0529 36 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 125717448 Common - L-cystine ABC transporter, substrate-binding component, putative SSA_0588 138 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 125718708 Common - hypothetical protein SSA_1916 116 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125716981 Common - Integral membrane protein, putative SSA_0103 7 COG5523 COG5523, Predicted integral membrane protein Function unknown 125718939 Common - Conserved uncharacterized protein SSA_2154 58 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 125717787 Pathogen - hypothetical protein SSA_0948 1 None None None 125718854 Common polC DNA polymerase III PolC SSA_2066 213 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 125718664 Common - hypothetical protein SSA_1866 2 None None None 125717236 Pathogen - hypothetical protein SSA_0366 1 None None None 125717163 Common leuS leucyl-tRNA synthetase SSA_0289 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125717329 Common - Cobalamin biosynthesis protein cobD, putative SSA_0464 148 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 125718274 Common aroK Shikimate kinase, putative SSA_1463 191 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 125717592 Common arcT hypothetical protein SSA_0741 189 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 125718574 Common cspR RRNA methylase, putative SSA_1774 156 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 125718061 Common pyrF orotidine 5'-phosphate decarboxylase SSA_1241 164 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 125718182 Pathogen - hypothetical protein SSA_1367 1 None None None 125717953 Common apbE Thiamine biosynthesis lipoprotein, putative SSA_1126 134 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 125716892 Common - translation-associated GTPase SSA_0005 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 125717600 Common - hypothetical protein SSA_0750 2 None None None 125717277 Pathogen - hypothetical protein SSA_0410 1 None None None 125718334 Common basA Glutathione peroxidase, putative SSA_1523 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 125718437 Common - Surface protein, putative SSA_1632 7 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125718124 Common - hypothetical protein SSA_1308 2 None None None 125718067 Common - hypothetical protein SSA_1247 8 COG1332 COG1332, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 125716975 Common norN Multi antimicrobial extrusion (MATE) family transporter, putative SSA_0097 173 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 125717851 Common - Zinc metalloprotease zmpC precursor, putative SSA_1018 34 COG3583 COG3583, Uncharacterized protein conserved in bacteria Function unknown 125719037 Common - hypothetical protein SSA_2258 21 COG4260 COG4260, Putative virion core protein (lumpy skin disease virus) Function unknown 125719087 Pathogen - hypothetical protein SSA_2310 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 125718834 Common - Reductase, putative SSA_2045 58 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 125718091 Common rpmE2 50S ribosomal protein L31 type B SSA_1272 159 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 125716889 Common dnaN DNA polymerase III subunit beta SSA_0002 214 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 125718456 Common - Acetyltransferases, putative SSA_1652 5 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125716943 Common galM Aldose 1-epimerase, putative SSA_0062 88 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 125717722 Common ezrA septation ring formation regulator EzrA SSA_0879 42 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 125717813 Common - hypothetical protein SSA_0978 2 COG3326 COG3326, Predicted membrane protein Function unknown 125719038 Common - hypothetical protein SSA_2259 2 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 125717145 Common - Phosphotransferase system (PTS) cellobiose-specific component IIA, putative SSA_0269 12 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 125718728 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase SSA_1936 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 125718414 Common - hypothetical protein SSA_1608 90 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125718446 Common glmU N-acetylglucosamine-1-phosphate uridyltransferase, putative SSA_1642 238 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 125717441 Common - Conserved uncharacterized protein SSA_0581 142 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 125718751 Common bacA undecaprenyl pyrophosphate phosphatase SSA_1959 196 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 125717268 Common - hypothetical protein SSA_0400 128 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125717244 Common - D-methionine-binding lipoprotein (ABC-type transporter), putative SSA_0375 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 125719023 Common spxA transcriptional regulator Spx SSA_2244 48 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 125717503 Pathogen - hypothetical protein SSA_0648 1 None None None 125717767 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_0927 36 COG1309 AcrR, Transcriptional regulator Transcription 125717575 Common - ABC-type multidrug/protein/lipid transport system (pediocin PA-1 exporter), ATPase and permease components, putative SSA_0724 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125717220 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_0349 158 COG1309 AcrR, Transcriptional regulator Transcription 125717259 Common - hypothetical protein SSA_0390 36 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 125718781 Common - Conserved uncharacterized protein SSA_1993 17 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 125718098 Common - hypothetical protein SSA_1280 29 COG3760 COG3760, Uncharacterized conserved protein Function unknown 125718489 Pathogen - hypothetical protein SSA_1689 1 None None None 125717772 Common - Acetyltransferase, GNAT family, putative SSA_0933 29 COG0456 RimI, Acetyltransferases General function prediction only 125718262 Common rexB Second subunit of major exonuclease, putative SSA_1452 26 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 125717554 Common - Cation transporter CorA family, putative SSA_0701 44 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 125718736 Common - Oligopeptide transport ATP-binding protein, putative SSA_1944 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 125718898 Pathogen - hypothetical protein SSA_2113 1 None None None 125717389 Common - Microcompartment protein, putative SSA_0525 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 125718460 Common - hypothetical protein SSA_1657 1 None None None 125719064 Common ilvD dihydroxy-acid dehydratase SSA_2286 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 125718476 Pathogen - hypothetical protein SSA_1673 1 None None None 125717092 Common ssb2 single-strand DNA-binding protein SSA_0214 203 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 125719068 Common - hypothetical protein SSA_2290 2 None None None 125717131 Common - Multiple antibiotic resistance operon transcription repressor (MarR), putative SSA_0255 41 COG1846 MarR, Transcriptional regulators Transcription 125719076 Common - Serine protease containing a PDZ domain, putative SSA_2298 28 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 125717833 Common galR Galactose operon transcriptional repressor, LacI family, putative SSA_1000 126 COG1609 PurR, Transcriptional regulators Transcription 125717694 Pathogen - Ubiquitin C-terminal hydrolase, putative SSA_0850 1 None None None 125718307 Pathogen - hypothetical protein SSA_1496 1 None None None 125719072 Common - hypothetical protein SSA_2294 2 None None None 125717321 Common scrA Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific, putative SSA_0456 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 125718358 Common - hypothetical protein SSA_1550 12 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 125717656 Common - hypothetical protein SSA_0808 1 None None None 125717380 Common - AmiR two-component response regulator with transcriptional antiterminator output domain, putative SSA_0516 222 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 125718752 Common - hypothetical protein SSA_1960 7 COG4907 COG4907, Predicted membrane protein Function unknown 125719032 Common tag 3-Methyladenine DNA glycosylase I, constitutive, putative SSA_2253 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 125716899 Common mesJ Cell cycle control ATPase, PP-loop superfamily, putative SSA_0013 211 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 125718616 Common - Conserved uncharacterized protein SSA_1817 27 None None None 125717916 Common papS tRNA CCA-pyrophosphorylase SSA_1086 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 125717940 Common - Cell wall surface anchor family protein, putative SSA_1112 2 None None None 125717945 Common - hypothetical protein SSA_1117 123 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 125718503 Common metS methionyl-tRNA synthetase SSA_1703 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718915 Common - DNA-binding protein, putative SSA_2131 52 COG3655 COG3655, Predicted transcriptional regulator Transcription 125718087 Common aroH hypothetical protein SSA_1268 19 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 125718756 Common - Stomatin/prohibitin-like membrane protease subunits, putative SSA_1965 202 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 125718519 Common - DNA replication intiation control protein YabA SSA_1720 10 COG4467 COG4467, Uncharacterized protein conserved in bacteria Function unknown 125716895 Common - Ribosome-associated heat shock protein (S4), putative SSA_0009 46 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 125718408 Common vacB Exoribonuclease, VacB/Rnb family, putative SSA_1602 192 COG0557 VacB, Exoribonuclease R Transcription 125716947 Common - hypothetical protein SSA_0066 26 COG4642 COG4642, Uncharacterized protein conserved in bacteria Function unknown 125718738 Common - Oligopeptide transport system permease protein, putative SSA_1946 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 125717240 Common - Acetyltransferase, GNAT family, putative SSA_0370 30 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 125717957 Common - Iron-dependent peroxidase, putative SSA_1130 48 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 125719081 Pathogen - hypothetical protein SSA_2303 1 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 125717590 Common arcC carbamate kinase SSA_0739 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 125719025 Common cinA competence damage-inducible protein A SSA_2246 212 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 125718105 Pathogen - hypothetical protein SSA_1287 2 None None None 125717872 Common - Sugar ABC transporter, permease protein, putative SSA_1040 110 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 125718403 Pathogen - hypothetical protein SSA_1597 1 None None None 125717231 Common - Conserved uncharacterized protein SSA_0360 5 None None None 125718311 Common infC translation initiation factor IF-3 SSA_1500 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 125718228 Common - hypothetical protein SSA_1414 55 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125717836 Common - ABC transporter substrate-binding protein-multiple sugars, putative SSA_1003 96 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 125716933 Common - Dihydroxyacetone kinase, phosphatase domain (Dak2), putative SSA_0050 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 125716997 Common rplE 50S ribosomal protein L5 SSA_0119 247 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 125718017 Common - Acetyltransferase, GNAT family, putative SSA_1196 33 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125717950 Common - Thioredoxin family protein, putative SSA_1122 142 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 125717372 Common - Conserved uncharacterized protein, possible phosphoserine phosphatase SSA_0508 8 None None None 125717750 Common - Transcriptional regulator, AbrB family (stationary/sporulation gene expression), putative SSA_0909 8 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 125718082 Common trmE tRNA modification GTPase TrmE SSA_1262 223 COG0486 ThdF, Predicted GTPase General function prediction only 125718024 Common - hypothetical protein SSA_1203 6 COG4684 COG4684, Predicted membrane protein Function unknown 125718596 Common pabC Aminodeoxychorismate lyase, putative SSA_1797 186 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 125719101 Common - 3-methyladenine DNA glycosylase, putative SSA_2325 81 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 125717757 Common - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, putative SSA_0916 61 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 125717445 Pathogen - hypothetical protein SSA_0585 1 None None None 125718347 Pathogen - hypothetical protein SSA_1538 1 None None None 125717149 Pathogen - hypothetical protein SSA_0273 1 None None None 125718558 Pathogen - hypothetical protein SSA_1759 1 None None None 125717026 Common - Sugar ABC transporter, ATP-binding protein, putative SSA_0148 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 125718691 Common - hypothetical protein SSA_1897 22 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 125717583 Common - Transposase, putative SSA_0732 1 None None None 125718859 Pathogen - hypothetical protein SSA_2071 1 None None None 125718325 Common - Cell-wall biogenesis glycosyltransferase, putative SSA_1514 11 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125717256 Common - Transcriptional regulator, GntR family, putative SSA_0387 56 COG0490 COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels Inorganic ion transport and metabolism 125719157 Common - Chromosome partitioning protein ParB or transcriptional regulator Spo0J, putative SSA_2382 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 125717254 Common opuAb ABC transporter, glycine-betaine/proline permease protein, putative SSA_0385 157 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 125717247 Common - chlorohydrolase SSA_0378 182 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 125718907 Common ksgA dimethyladenosine transferase SSA_2123 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 125718954 Common - hypothetical protein SSA_2170 92 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 125718470 Pathogen - hypothetical protein SSA_1667 1 None None None 125718996 Common - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2, putative SSA_2214 191 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 125718641 Common - Histidine kinase, putative SSA_1843 141 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 125717643 Common - hypothetical protein SSA_0795 1 None None None 125717144 Common ptcB Phosphotransferase system (PTS) cellobiose-specific component IIB, putative SSA_0268 32 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 125718505 Common - hypothetical protein SSA_1705 6 None None None 125719129 Common - Conserved uncharacterized protein SSA_2355 8 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 125718975 Common - ADP-ribose pyrophosphatase, putative SSA_2193 84 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125718929 Common estA Tributyrin esterase, putative SSA_2145 68 COG0627 COG0627, Predicted esterase General function prediction only 125718272 Common - Transcriptional attenuator LytR, putative SSA_1460 57 COG1316 LytR, Transcriptional regulator Transcription 125719149 Common trpS tryptophanyl-tRNA synthetase II SSA_2375 246 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718200 Common - Multiple antibiotic resistance operon transcription repressor (MarR), putative SSA_1385 119 COG1846 MarR, Transcriptional regulators Transcription 125717500 Common dps DNA Protection System, DNA-binding ferritin-like protein (oxidative damage protectant), putative SSA_0644 129 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 125718959 Pathogen - hypothetical protein SSA_2176 1 None None None 125716920 Common - Secreted protein, possible function in cell-wall metabolism (amidase), putative SSA_0036 6 COG3942 COG3942, Surface antigen General function prediction only 125718838 Common pnpA polynucleotide phosphorylase/polyadenylase SSA_2049 236 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 125718178 Common - FmtA-like protein, putative SSA_1363 119 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125718093 Pathogen - hypothetical protein SSA_1275 1 None None None 125717108 Common - Conserved uncharacterized protein SSA_0231 1 None None None 125717965 Common pdhA Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit, putative SSA_1138 158 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 125717550 Pathogen - hypothetical protein SSA_0697 1 None None None 125717179 Common - hypothetical protein SSA_0305 4 COG4129 COG4129, Predicted membrane protein Function unknown 125718056 Common mutX Mutator protein, putative SSA_1236 40 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125719098 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_2322 26 COG1309 AcrR, Transcriptional regulator Transcription 125717124 Pathogen - hypothetical protein SSA_0248 1 None None None 125717109 Pathogen - hypothetical protein SSA_0232 1 None None None 125717672 Common - hypothetical protein SSA_0826 144 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 125718803 Common - Phosphoglycerate mutase, putative SSA_2016 106 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125717912 Common fruA PTS system, fructose specific II ABC components, putative SSA_1082 142 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 125717125 Pathogen - hypothetical protein SSA_0249 1 None None None 125718560 Common hlyX Hemolysin (containing CBS domains), putative SSA_1761 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 125717462 Pathogen - hypothetical protein SSA_0604 1 None None None 125719136 Common sdaA L-serine dehydratase alpha subunit SSA_2362 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 125717636 Common uncD F0F1 ATP synthase subunit beta SSA_0788 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 125717515 Common divIVA Cell division protein DivIVA, putative SSA_0660 41 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 125718901 Common rmuC DNA recombination protein RmuC, putative SSA_2117 126 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 125718908 Common - Dehydrogenase, eukaryotic-like, putative SSA_2124 184 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 125717544 Common recR recombination protein RecR SSA_0690 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 125718451 Pathogen - hypothetical protein SSA_1647 2 None None None 125718250 Common - Phosphoribosyl-ATP pyrophosphohydrolase, putative SSA_1440 195 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 125717927 Common - Formate-nitrate transporter, putative SSA_1098 48 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 125717210 Common - isopentenyl pyrophosphate isomerase SSA_0336 82 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 125718165 Common - Transcriptional regulator, biotin repressor family, putative SSA_1349 15 COG1827 COG1827, Predicted small molecule binding protein (contains 3H domain) General function prediction only 125717793 Common sspD surface protein D SSA_0956 140 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 125718791 Common zmpB Zinc metalloprotease zmpB precursor, putative SSA_2004 2 COG3583 COG3583, Uncharacterized protein conserved in bacteria Function unknown 125718034 Common - Pyridoxal-phosphate dependent aminotransferase, putative SSA_1213 241 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 125718680 Common prtS Subtilisin-like serine proteases, putative SSA_1882 92 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 125717887 Common - Firmicute fructose-1,6-bisphosphatase, putative SSA_1056 18 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 125717171 Common mleS Malolactic enzyme, putative SSA_0297 198 COG0281 SfcA, Malic enzyme Energy production and conversion 125718815 Common - Arsenical resistance operon transcription repressor, putative SSA_2389 74 COG0640 ArsR, Predicted transcriptional regulators Transcription 125718769 Common rpmB 50S ribosomal protein L28 SSA_1980 79 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 125718528 Common livJ ABC transporter substrate-binding protein-branched chain amino acid transport, putative SSA_1729 141 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 125717626 Common glgA glycogen synthase SSA_0778 149 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 125718132 Common - Nicotinamide mononucleotide transporter, putative SSA_1316 41 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 125717990 Common ffh SRP54, signal recognition particle GTPase protein, putative SSA_1167 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 125717135 Common tpx thiol peroxidase SSA_0259 119 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 125719011 Pathogen - hypothetical protein SSA_2229 2 None None None 125718179 Pathogen - hypothetical protein SSA_1364 1 None None None 125717856 Common - Von Willebrand factor-binding protein precursor, putative SSA_1023 2 None None None 125717073 Pathogen - hypothetical protein SSA_0195 1 None None None 125718852 Pathogen - hypothetical protein SSA_2064 1 None None None 125718264 Common - hypothetical protein SSA_1454 4 None None None 125719019 Common - Holliday junction resolvase-like protein SSA_2240 183 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 125717157 Common - Phosphotransferase system (PTS), cellobiose-specific IIB component, putative SSA_0283 28 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 125717071 Common ackA Acetate kinase, putative SSA_0192 161 COG0282 ackA, Acetate kinase Energy production and conversion 125717895 Common - hypothetical protein SSA_1064 7 COG5263 COG5263, FOG: Glucan-binding domain (YG repeat) General function prediction only 125718371 Common - Histidine kinase, putative SSA_1564 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 125718353 Common - Conserved uncharacterized protein SSA_1545 10 COG4768 COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain General function prediction only 125718287 Common - Phosphoglycerol transferase, alkaline phosphatase superfamily, putative SSA_1476 48 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 125717285 Common - AraC-type DNA-binding domain-containing protein, putative SSA_0418 116 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 125718042 Common ldh L-lactate dehydrogenase SSA_1221 166 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 125718722 Common accA acetyl-CoA carboxylase subunit alpha SSA_1930 175 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 125718662 Common pncB nicotinate phosphoribosyltransferase SSA_1864 127 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 125719001 Common - UDP-glucose 4-epimerase, putative SSA_2219 144 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 125716952 Common nanE N-acetylmannosamine-6-phosphate 2-epimerase SSA_0071 43 COG3010 NanE, Putative N-acetylmannosamine-6-phosphate epimerase Carbohydrate transport and metabolism 125718760 Common ilvB acetolactate synthase catalytic subunit SSA_1970 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 125717831 Pathogen - hypothetical protein SSA_0998 1 None None None 125717055 Common rpoB DNA-directed RNA polymerase subunit beta SSA_0176 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 125717880 Common potB ABC transporter membrane-spanning permease-spermidine/putrescine transport, putative SSA_1049 199 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 125717933 Common rplJ 50S ribosomal protein L10 SSA_1104 215 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 125718230 Common - hypothetical protein SSA_1416 146 COG0327 COG0327, Uncharacterized conserved protein Function unknown 125717494 Common trpA tryptophan synthase subunit alpha SSA_0638 213 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 125717046 Pathogen - hypothetical protein SSA_0168 2 None None None 125718922 Common jag RNA-binding protein, Jag family, putative SSA_2138 47 COG1847 Jag, Predicted RNA-binding protein General function prediction only 125718887 Common - Amino acid ABC transporter, periplasmic amino acid-binding protein, putative SSA_2101 75 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 125717428 Common - Aspartyl-tRNA synthetase 1, putative SSA_0568 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718152 Common - Conserved ankyrin repeat protein, putative SSA_1336 3 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 125718521 Common tdk thymidylate kinase SSA_1722 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 125718624 Common - hypothetical protein SSA_1825 6 COG3711 BglG, Transcriptional antiterminator Transcription 125718331 Common tuf elongation factor Tu SSA_1520 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 125717033 Pathogen - hypothetical protein SSA_0155 1 None None None 125718009 Common licT Transcriptional antiterminator, BglG family, putative SSA_1187 29 COG3711 BglG, Transcriptional antiterminator Transcription 125717435 Common - Hydrolase, HAD superfamily, putative SSA_0575 44 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 125717282 Common - Permease, putative SSA_0415 203 COG0628 PerM, Predicted permease General function prediction only 125718551 Common - Phosphotransferase system, trehalose-specific IIBC component, putative SSA_1752 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 125718289 Common - Transposase ORF1, putative SSA_1478 1 None None None 125717665 Common - Antirepressor regulating drug resistance (membrane-bound), putative SSA_0817 26 COG4219 MecR1, Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component Transcription / Signal transduction mechanisms 125717451 Common - Conserved uncharacterized protein SSA_0591 74 COG1912 COG1912, Uncharacterized conserved protein Function unknown 125718241 Common elaC ribonuclease Z SSA_1430 116 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 125718987 Common nusG transcription antitermination protein NusG SSA_2205 215 COG0250 NusG, Transcription antiterminator Transcription 125717635 Common uncG F0F1 ATP synthase subunit gamma SSA_0787 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 125717064 Common comYB Competence protein ComYB, putative SSA_0185 18 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 125717806 Pathogen - hypothetical protein SSA_0969 1 None None None 125719084 Pathogen - hypothetical protein SSA_2307 1 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 125716954 Common - hypothetical protein SSA_0073 33 COG2731 EbgC, Beta-galactosidase, beta subunit Carbohydrate transport and metabolism 125718089 Common flaV flavodoxin SSA_1270 33 COG0716 FldA, Flavodoxins Energy production and conversion 125717182 Pathogen - hypothetical protein SSA_0308 2 COG0456 RimI, Acetyltransferases General function prediction only 125717978 Common hemK HemK protein, putative SSA_1153 218 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 125717743 Common aldB Alpha-acetolactate decarboxylase, putative SSA_0901 40 COG3527 AlsD, Alpha-acetolactate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 125717147 Common - Glycosylhydrolase, family 35, putative SSA_0271 24 COG1874 LacA, Beta-galactosidase Carbohydrate transport and metabolism 125717808 Pathogen - Conserved uncharacterized protein SSA_0971 1 None None None 125717189 Common - Transcriptional regulator, MarR family, putative SSA_0315 5 COG1846 MarR, Transcriptional regulators Transcription 125716988 Common rplB 50S ribosomal protein L2 SSA_0110 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 125717310 Pathogen - hypothetical protein SSA_0445 1 None None None 125718026 Common bta Bta, putative SSA_1205 3 None None None 125717526 Common folD Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, putative SSA_0671 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 125719095 Common - PilB-like pili biogenesis ATPase, putative SSA_2318 223 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 125718458 Common - hypothetical protein SSA_1655 16 COG3153 COG3153, Predicted acetyltransferase General function prediction only 125717215 Common - Pyruvate formate-lyase, putative SSA_0342 53 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 125716983 Common - Uridine kinase, putative SSA_0105 8 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 125718912 Common labT hypothetical protein SSA_2128 3 None None None 125717395 Common eutQ Ethanolamine utilization protein eutQ (cobalamin-dependent degradation of ethanolamine), putative SSA_0531 20 COG4766 EutQ, Ethanolamine utilization protein Amino acid transport and metabolism 125717939 Common brnQ Branched-chain amino acid transport system II carrier protein, putative SSA_1111 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 125717446 Common - hypothetical protein SSA_0586 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 125718432 Common - hypothetical protein SSA_1627 48 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 125718998 Common licD1 LPS biosynthesis protein, putative SSA_2216 15 COG3475 COG3475, LPS biosynthesis protein Cell envelope biogenesis, outer membrane 125717828 Common - Antibiotic-resistance protein, alpha/beta superfamily hydrolase, putative SSA_0995 6 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 125718294 Common - putative lipid kinase SSA_1483 106 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 125717841 Common galK galactokinase SSA_1008 84 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 125716965 Common ntpK V-type ATP synthase subunit K SSA_0086 21 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 125718643 Common pkn Serine/threonine protein kinase, putative SSA_1845 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 125718380 Pathogen - hypothetical protein SSA_1573 1 None None None 125717691 Common pfk 6-phosphofructokinase SSA_0847 157 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 125717099 Common - PTS system, mannose-specific IIC component, putative SSA_0221 25 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 125717484 Common - hypothetical protein SSA_0627 11 COG4470 COG4470, Uncharacterized protein conserved in bacteria Function unknown 125717084 Pathogen - hypothetical protein SSA_0206 1 None None None 125717678 Common - Accessory secretory protein Asp1, putative SSA_0833 5 None None None 125718940 Common - hypothetical protein SSA_2155 77 COG2013 COG2013, Uncharacterized conserved protein Function unknown 125718935 Common - hypothetical protein SSA_2150 9 COG2261 COG2261, Predicted membrane protein Function unknown 125717703 Common - N-acetylmuramidase/lysin, putative SSA_0860 12 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 125717671 Common rpoD RNA polymerase sigma factor RpoD SSA_0825 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 125718162 Common - hypothetical protein SSA_1346 10 None None None 125718817 Common copA P-type ATPase-metal/cation transport (probably copper), putative SSA_2027 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 125717437 Common - Ancient RNA-binding IF3-C fold (CRS1/YhbY domain), putative SSA_0577 96 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 125718537 Common - Polysaccharide biosynthesis protein, putative SSA_1738 62 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 125716890 Common - hypothetical protein SSA_2390 25 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 125717382 Common - reactivating factor for ethanolamine ammonia lyase SSA_0518 17 COG4819 EutA, Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition Amino acid transport and metabolism 125717848 Common ubiA prenyltransferase SSA_1015 3 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 125719059 Pathogen - hypothetical protein SSA_2281 1 None None None 125717362 Common - Nickel ABC transporter, putative SSA_0497 217 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 125718155 Pathogen phpA Pneumococcal histidine triad protein D precursor, putative SSA_1339 1 None None None 125716999 Common rpsH 30S ribosomal protein S8 SSA_0120 248 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 125718876 Common araD L-ribulose-5-phosphate 4-epimerase SSA_2088 131 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 125719054 Pathogen - hypothetical protein SSA_2275 1 None None None 125718072 Common - hypothetical protein SSA_1252 5 COG5551 COG5551, Uncharacterized conserved protein Function unknown 125718430 Common - Lactoylglutathione lyase, putative SSA_1625 41 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 125718891 Common - Flavin monoxygenase, putative SSA_2106 76 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 125718144 Pathogen - hypothetical protein SSA_1328 1 None None None 125718516 Common spnIM Modification methylase DpnIIB, putative SSA_1717 141 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 125718701 Common - Transcriptional attenuator LytR, putative SSA_1909 63 COG1316 LytR, Transcriptional regulator Transcription 125718746 Common - Aminotransferase, class-V, putative SSA_1954 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 125717296 Common hutH histidine ammonia-lyase SSA_0429 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 125717932 Pathogen - hypothetical protein SSA_1103 1 None None None 125718234 Common metA homoserine O-succinyltransferase SSA_1420 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 125717058 Common - hypothetical protein SSA_0179 2 None None None 125717199 Common ugpQ Membrane-anchored glycerophosphoryl diester phosphodiesterase, putative SSA_0325 63 COG4781 COG4781, Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase Energy production and conversion 125719111 Common - Transcriptional regulator, PadR family, putative SSA_2336 36 COG1695 COG1695, Predicted transcriptional regulators Transcription 125718305 Common murZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase SSA_1494 217 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 125718183 Pathogen - hypothetical protein SSA_1368 1 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125717094 Common - Histidine kinase, putative SSA_0216 142 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 125719066 Common cadD2 Cadmium resistance transporter, putative SSA_2288 20 COG4300 CadD, Predicted permease, cadmium resistance protein Inorganic ion transport and metabolism 125718462 Common - ABC-type antimicrobial peptide transport system, permease component, putative SSA_1659 17 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 125716948 Common - Acyltransferase (yrhL-like subfamily of SGNH-hydrolases), putative SSA_0067 93 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 125717986 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein SSA_1163 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 125718057 Common ung uracil-DNA glycosylase SSA_1237 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 125717736 Common - ATP-binding cassette protein, putative SSA_0894 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125718465 Common - NADH-dependent oxidoreductase, putative SSA_1662 176 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 125716897 Common - hypothetical protein SSA_0011 1 None None None 125717557 Common - Isocitrate dehydrogenase [NADP], putative SSA_0704 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 125717774 Common truB tRNA pseudouridine synthase B SSA_0935 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 125718618 Common valS valyl-tRNA synthetase SSA_1819 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718658 Common pbp1A Penicillin-binding protein 1A, putative SSA_1860 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 125717952 Common - NADPH-dependent FMN reductase, putative SSA_1125 107 COG0431 COG0431, Predicted flavoprotein General function prediction only 125719049 Common aspS aspartyl-tRNA synthetase SSA_2270 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125717331 Common cbiC precorrin-8X methylmutase SSA_0466 115 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 125717877 Pathogen - hypothetical protein SSA_1045 1 None None None 125717003 Common rpsE 30S ribosomal protein S5 SSA_0124 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 125718636 Common - hypothetical protein SSA_1837 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 125716990 Common rplV 50S ribosomal protein L22 SSA_0112 235 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 125717796 Common ciaR Two-component response transcriptional regulator (CheY-like receiver domain and a winged-helix DNA-binding domains), putative SSA_0959 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125719062 Common hisS histidyl-tRNA synthetase SSA_2284 248 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718388 Common - Esterase, alpha/beta hydrolase superfamily, putative SSA_1582 5 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 125719074 Common - Transcriptional regulator, XRE family, putative SSA_2296 69 COG1476 COG1476, Predicted transcriptional regulators Transcription 125718604 Common dnaI primosomal protein DnaI SSA_1805 34 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 125717356 Common - Alpha-ribazole-5'-phosphate phosphatase, putative SSA_0491 172 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125718965 Common pgi glucose-6-phosphate isomerase SSA_2183 204 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 125718439 Common - Heme utilization/adhesion exoprotein, putative SSA_1634 8 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125718063 Common pyrK dihydroorotate dehydrogenase electron transfer subunit SSA_1243 80 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 125718788 Common - hypothetical protein SSA_2000 13 COG4720 COG4720, Predicted membrane protein Function unknown 125718107 Pathogen - hypothetical protein SSA_1289 2 None None None 125717765 Common - ABC-type antimicrobial peptide transport system, ATPase component, putative SSA_0925 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125717687 Common - hypothetical protein SSA_0843 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 125718721 Common mip Macrophage infectivity potentiator protein, putative SSA_1929 62 COG2128 COG2128, Uncharacterized conserved protein Function unknown 125718442 Common - hypothetical protein SSA_1638 8 COG4269 COG4269, Predicted membrane protein Function unknown 125718074 Common - hypothetical protein SSA_1254 1 None None None 125717801 Common deaD DEAD RNA helicase, putative SSA_0964 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 125718246 Pathogen - hypothetical protein SSA_1435 1 None None None 125717729 Common eno phosphopyruvate hydratase SSA_0886 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 125718189 Common - Multidrug ABC transporter, ATPase and permease components, putative SSA_1374 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718176 Common - ORFA, transposon ISSsa2 SSA_1361 6 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 125716906 Common prsA ribose-phosphate pyrophosphokinase SSA_0020 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 125716913 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase SSA_0028 224 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 125718821 Pathogen - Conserved domain uncharacterized protein SSA_2031 1 None None None 125716941 Common agaS Tagatose-6-phosphate ketose/aldose isomerase, putative SSA_0060 39 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 125719109 Common dltA D-alanine--D-alanyl carrier protein ligase SSA_2334 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 125718544 Common csbD General stress response protein CsbD, putative SSA_1745 1 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 125718425 Common pyrH uridylate kinase SSA_1620 243 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 125717602 Common - hypothetical protein SSA_0752 111 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 125719053 Common - hypothetical protein SSA_2274 4 None None None 125717327 Common - ABC-type multidrug transport system (phospholipid, LPS, lipid A and drug exporter), ATPase and permease components, putative SSA_0462 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718394 Common - Conserved ABC-type antimicrobial permease-like protein, putative SSA_1588 41 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 125718412 Common coaE dephospho-CoA kinase SSA_1606 208 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 125718080 Common deoB phosphopentomutase SSA_1260 71 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 125717221 Common recD Helicase, putative SSA_0350 141 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 125717505 Common typA GTP-binding protein TypA/BipA, putative SSA_0650 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 125717207 Common mvaK1 Mevalonate kinase, putative SSA_0333 29 COG1577 ERG12, Mevalonate kinase Lipid metabolism 125718745 Common nifU NifU family protein, putative SSA_1953 155 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 125717720 Common - Phosphoglycolate phosphatase, putative SSA_0877 31 COG0546 Gph, Predicted phosphatases General function prediction only 125718337 Common ebsC hypothetical protein SSA_1527 103 COG2606 EbsC, Uncharacterized conserved protein Function unknown 125717034 Common - ATPase with chaperone activity, ATP-binding subunit, putative SSA_0156 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 125718733 Common - hypothetical protein SSA_1941 13 COG1846 MarR, Transcriptional regulators Transcription 125718718 Pathogen - hypothetical protein SSA_1926 1 None None None 125718875 Common - Conserved uncharacterized protein SSA_2087 127 COG1609 PurR, Transcriptional regulators Transcription 125717379 Common - Propanediol utilization protein PduU, putative SSA_0515 20 COG4810 EutS, Ethanolamine utilization protein Amino acid transport and metabolism 125718880 Common ptxB Phosphotransferase system sugar-specific EII component, putative SSA_2092 30 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 125717655 Common obgE GTPase ObgE SSA_0807 249 COG0536 Obg, Predicted GTPase General function prediction only 125718411 Common pmrA Major facilitator superfamily multi-drug resistance efflux pump pmrA, putative SSA_1605 201 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 125718892 Common glmS D-fructose-6-phosphate amidotransferase SSA_2107 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 125718304 Common - hypothetical protein SSA_1493 97 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125718990 Common secE preprotein translocase subunit SecE SSA_2208 2 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 125717263 Common - hypothetical protein SSA_0394 10 None None None 125718484 Common - NrdI protein, putative SSA_1683 4 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 125719043 Pathogen - hypothetical protein SSA_2264 1 None None None 125718429 Common - hypothetical protein SSA_1624 2 None None None 125717667 Common - hypothetical protein SSA_0819 12 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 125718427 Common rplA 50S ribosomal protein L1 SSA_1622 237 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 125717726 Common grk Glycerate kinase, putative SSA_0883 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 125717800 Common - Peptidoglycan N-acetylglucosamine deacetylase A, putative SSA_0963 105 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 125718309 Common rplT 50S ribosomal protein L20 SSA_1498 212 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 125718861 Common uppS Undecaprenyl pyrophosphate synthetase, putative SSA_2073 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 125718431 Common ftsK DNA translocase ftsK, putative SSA_1626 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 125718776 Common - ABC-type transport system (uncharacterized), permease component, putative SSA_1988 33 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 125717359 Common - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component, putative SSA_0494 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 125718058 Common - hypothetical protein SSA_1238 22 None None None 125719104 Common - hypothetical protein SSA_2329 131 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125717762 Common - hypothetical protein SSA_0922 4 COG3933 COG3933, Transcriptional antiterminator Transcription 125717764 Common - ABC-type antimicrobial peptide transport system, permease component, putative SSA_0924 38 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 125718724 Common accC acetyl-CoA carboxylase biotin carboxylase subunit SSA_1932 235 COG0439 AccC, Biotin carboxylase Lipid metabolism 125716903 Common mreC Cell shape determining protein MreC, putative SSA_0017 92 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 125717542 Common gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, putative SSA_0688 159 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 125717205 Common cppA C3-degrading proteinase, putative SSA_0331 2 None None None 125717577 Common - FmtA-like protein, putative SSA_0726 133 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125718433 Common - MutT/nudix family protein, putative SSA_1628 10 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 125717225 Common - Uncharacterized membrane protein SSA_0354 8 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 125718073 Common - hypothetical protein SSA_1253 10 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 125718420 Common - Alanine dehydrogenase, putative SSA_1615 165 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 125718913 Common - Arsenical resistance operon transcription repressor (ArsR), putative SSA_2129 3 COG1497 COG1497, Predicted transcriptional regulator Transcription 125717216 Common dinP DNA polymerase IV SSA_0343 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 125717581 Common - Arsenical resistance operon transcription repressor (ArsR), putative SSA_0730 91 COG0640 ArsR, Predicted transcriptional regulators Transcription 125718652 Common - Conserved uncharacterized protein SSA_1854 3 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 125717279 Common - ABC-type multidrug transport system (3-component subtilin immunity exporter), ATPase component, putative SSA_0412 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717083 Common - Transcriptional regulator, XRE family, putative SSA_2393 70 COG1476 COG1476, Predicted transcriptional regulators Transcription 125718607 Common rgfB hypothetical protein SSA_1808 4 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 125717133 Common - N-acetylmuramidase/lysin, putative SSA_0257 6 None None None 125718464 Pathogen - hypothetical protein SSA_1661 1 None None None 125717701 Common rmlD DTDP-L-rhamnose synthase, putative SSA_0858 185 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 125718475 Pathogen - hypothetical protein SSA_1672 1 None None None 125718563 Common - hypothetical protein SSA_1764 3 None None None 125718548 Common pflA Pyruvate formate-lyase-activating enzyme, putative SSA_1749 92 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 125717340 Common - CbiK protein, putative SSA_0475 25 COG4822 CbiK, Cobalamin biosynthesis protein CbiK, Co2+ chelatase Coenzyme metabolism 125718381 Common - Glycosyl transferase, family 1, putative SSA_1574 220 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125717570 Common - Conserved uncharacterized protein SSA_0718 22 COG3152 COG3152, Predicted membrane protein Function unknown 125717611 Pathogen - hypothetical protein SSA_0762 1 None None None 125718377 Common - hypothetical protein SSA_1570 2 None None None 125718500 Pathogen - hypothetical protein SSA_1700 1 None None None 125717943 Common - Cytochrome C-type biogenesis protein, putative SSA_1115 168 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 125718452 Common - hypothetical protein SSA_1648 4 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 125718637 Common cysK Cysteine synthase, putative SSA_1839 224 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 125718278 Common aroC chorismate synthase SSA_1467 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 125717770 Pathogen - hypothetical protein SSA_0931 1 None None None 125718094 Common - Conserved uncharacterized protein SSA_1276 11 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 125717113 Common cshA recombination factor protein RarA SSA_0236 242 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 125718762 Common - Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative SSA_1972 200 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 125718175 Common - Arginine/histidine ABC transporter, ATPase component, putative SSA_1360 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 125717618 Common nrdE ribonucleotide-diphosphate reductase subunit alpha SSA_0770 217 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 125717935 Common iga IgA-specific metalloendopeptidase SSA_1106 19 COG3583 COG3583, Uncharacterized protein conserved in bacteria Function unknown 125718297 Common mesH hypothetical protein SSA_1486 7 COG2246 COG2246, Predicted membrane protein Function unknown 125718840 Common - Oligoendopeptidase, putative SSA_2051 84 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 125718645 Common sunL RRNA methyltransferase RsmB, putative SSA_1847 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 125717292 Common - Glycosyltransferase, putative SSA_0425 87 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125717384 Common - ethanolamine ammonia-lyase small subunit SSA_0520 52 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 125718744 Common - ABC-type Fe-S cluster assembly transporter, permease component, putative SSA_1952 186 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 125717088 Common - hypothetical protein SSA_0210 1 None None None 125716945 Common - hypothetical protein SSA_0064 27 COG3575 COG3575, Uncharacterized protein conserved in bacteria Function unknown 125717309 Common - Possible ABC-type efflux pump permease component, putative SSA_0443 5 None None None 125717846 Common - Phosphatidylserine synthase, putative SSA_1013 140 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 125717143 Common - ROK family protein, putative SSA_0267 126 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 125717984 Common - hypothetical protein SSA_1161 12 COG4086 COG4086, Predicted secreted protein Function unknown 125718514 Common serC phosphoserine aminotransferase SSA_1715 125 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 125718346 Common - Conserved uncharacterized protein SSA_1537 11 COG4443 COG4443, Uncharacterized protein conserved in bacteria Function unknown 125717191 Common rimI Ribosomal protein alanine acetyl transferase, putative SSA_0317 89 COG0456 RimI, Acetyltransferases General function prediction only 125716916 Common purM phosphoribosylaminoimidazole synthetase SSA_0032 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 125719088 Common norD Nitric oxide reductase NorD / Von Willebrand factor type A (vWA) domain protein, putative SSA_2311 2 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 125717536 Common - Conserved uncharacterized protein SSA_0682 51 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 125718114 Common malX Maltose/maltodextrin ABC transporter, sugar-binding protein MalX, putative SSA_1298 51 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 125717742 Common - Tetratricopeptide repeat (TPR) family protein SSA_0900 41 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 125717675 Common - Glycosyltransferase, putative SSA_0830 35 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 125717486 Common - hypothetical protein SSA_0629 5 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 125717100 Common - PTS system, mannose-specific IID component, putative SSA_0222 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 125717481 Common - hypothetical protein SSA_0624 212 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 125719057 Common ukp Ukp protein, putative SSA_2278 7 COG4499 COG4499, Predicted membrane protein Function unknown 125717708 Common - hypothetical protein SSA_0865 2 COG4506 COG4506, Uncharacterized protein conserved in bacteria Function unknown 125718847 Common - 16S rRNA uridine-516 pseudouridylate synthase, putative SSA_2059 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 125718448 Pathogen - hypothetical protein SSA_1644 1 None None None 125718163 Common phnA PhnA protein, putative SSA_1347 106 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 125717775 Common mreA bifunctional riboflavin kinase/FMN adenylyltransferase SSA_0936 211 COG0196 RibF, FAD synthase Coenzyme metabolism 125717735 Common - ATP-binding cassette transporter-like protein, putative SSA_0893 83 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 125716969 Common - Acetyltransferase, GNAT family, putative SSA_0090 97 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125718360 Pathogen - hypothetical protein SSA_1552 1 None None None 125717863 Common flaR topology modulation protein SSA_1031 41 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 125717442 Common - Methylase, putative SSA_0582 103 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 125718571 Common - Conserved DNA methyltransferase protein, putative SSA_1771 69 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 125718022 Common - phosphopantothenate--cysteine ligase SSA_1201 211 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 125718159 Common pyrB aspartate carbamoyltransferase catalytic subunit SSA_1343 236 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 125716935 Common - Transcriptional regulator, GntR family, putative SSA_0052 112 COG2188 PhnF, Transcriptional regulators Transcription 125717699 Common gtrB Glycosyltransferase (vectorial glycosyl polymerization (VGP) family), putative SSA_0856 199 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125718310 Common rpmI 50S ribosomal protein L35 SSA_1499 123 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 125718868 Common - hypothetical protein SSA_2080 14 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 125718654 Pathogen - hypothetical protein SSA_1856 1 None None None 125716962 Common - Transcriptional regulator, RpiR family (phosphosugar-binding), putative SSA_0081 100 COG1737 RpiR, Transcriptional regulators Transcription 125718689 Common rbfA ribosome-binding factor A SSA_1895 170 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 125718806 Common - hypothetical protein SSA_2019 38 COG3830 COG3830, ACT domain-containing protein Signal transduction mechanisms 125718106 Common - hypothetical protein SSA_1288 3 None None None 125717326 Common - ABC-type multidrug transport system, ATPase and permease components, putative SSA_0461 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125717417 Pathogen - hypothetical protein SSA_0557 1 None None None 125717024 Common - Transcriptional regulator, TetR family, putative SSA_0145 5 COG1309 AcrR, Transcriptional regulator Transcription 125718130 Common - Fe-S-cluster oxidoreductase, putative SSA_1314 10 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 125717315 Common efp elongation factor P SSA_0450 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 125717183 Common - Glyoxalase/Bleomycin resistance protein/dioxygenase domain, putative SSA_0309 22 None None None 125717681 Common secA2 preprotein translocase subunit SecA SSA_0836 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 125717112 Common int Integrase/recombinase, phage associated, putative SSA_0235 59 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 125717363 Common - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, putative SSA_0498 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 125717066 Common comYD Competence protein ComYD, putative SSA_0187 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 125717194 Common - hypothetical protein SSA_0320 17 COG4392 COG4392, Predicted membrane protein Function unknown 125718075 Common - hypothetical protein SSA_1255 95 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 125717973 Common - Beta-glucosides PTS, EIIC, putative SSA_1148 37 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 125717821 Common - TfoX N-terminal domain family protein, putative SSA_0988 9 COG3070 TfoX, Regulator of competence-specific genes Transcription 125718194 Pathogen - hypothetical protein SSA_1379 1 None None None 125717213 Common - hypothetical protein SSA_0339 20 COG3610 COG3610, Uncharacterized conserved protein Function unknown 125717688 Common - hypothetical protein SSA_0844 4 None None None 125718967 Common purA adenylosuccinate synthetase SSA_2185 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 125718129 Common - hypothetical protein SSA_1313 51 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 125718921 Common - hypothetical protein SSA_2137 1 None None None 125718989 Pathogen - hypothetical protein SSA_2206 1 None None None 125718830 Common - ABC transporter ATP-binding protein-multiple sugar transport, putative SSA_2040 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 125718323 Common - hypothetical protein SSA_1512 5 COG4713 COG4713, Predicted membrane protein Function unknown 125718312 Common cmk cytidylate kinase SSA_1501 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 125716972 Common ntpD V-type ATP synthase subunit D SSA_0093 43 COG1394 NtpD, Archaeal/vacuolar-type H+-ATPase subunit D Energy production and conversion 125718040 Common srtA Sortase, putative SSA_1219 16 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 125717817 Common - SlyA-like protein, putative SSA_0984 5 COG1846 MarR, Transcriptional regulators Transcription 125718576 Common trkH Potassium uptake protein, Trk family, putative SSA_1776 136 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 125719017 Common - Dihydrofolate:folylpolyglutamate synthetase, putative SSA_2237 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 125718282 Common - hypothetical protein SSA_1471 127 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 125717865 Common coaA pantothenate kinase SSA_1033 95 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 125717239 Common - NADP-specific glutamate dehydrogenase, putative SSA_0369 9 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 125717885 Common - CBS domain protein, putative SSA_1054 42 COG0517 COG0517, FOG: CBS domain General function prediction only 125718007 Common smf DNA processing Smf protein, putative SSA_1185 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 125718588 Common - Metal-dependent phosphohydrolase, HD superfamily, putative SSA_1789 11 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 125718160 Common pyrP Xanthine/uracil permeases, putative SSA_1344 123 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 125717006 Common secY preprotein translocase subunit SecY SSA_0127 242 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 125719121 Common - Coenzyme F390 synthetase, putative SSA_2347 79 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 125718546 Common - hypothetical protein SSA_1747 6 None None None 125718136 Common - hypothetical protein SSA_1320 6 None None None 125717456 Pathogen - hypothetical protein SSA_0596 1 None None None 125717300 Common - Methenyl tetrahydrofolate cyclohydrolase, putative SSA_0433 37 COG3404 COG3404, Methenyl tetrahydrofolate cyclohydrolase Amino acid transport and metabolism 125717622 Common gapN NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative SSA_0774 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 125716915 Common purF amidophosphoribosyltransferase SSA_0031 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 125718509 Pathogen - hypothetical protein SSA_1709 1 None None None 125718697 Common - ABC-type multidrug transport system, permease component, putative SSA_1904 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 125718004 Common gid tRNA (uracil-5-)-methyltransferase Gid SSA_1182 192 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 125717255 Common opuAa Glycine-betaine ABC transporter, ATPase component, putative SSA_0386 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 125718669 Common pbpX Penicillin-binding protein 2X, putative SSA_1871 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 125719002 Common - Galactosyltransferase, putative SSA_2220 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 125717422 Pathogen - hypothetical protein SSA_0562 1 None None None 125718522 Common - hypothetical protein SSA_1723 61 COG1284 COG1284, Uncharacterized conserved protein Function unknown 125717253 Common - hypothetical protein SSA_0384 9 COG5279 CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain Cell division and chromosome partitioning 125717632 Common uncF F0F1 ATP synthase subunit B SSA_0784 176 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 125718928 Common gltX glutamyl-tRNA synthetase SSA_2144 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 125717036 Pathogen - hypothetical protein SSA_0158 1 None None None 125718198 Common aspB aspartate aminotransferase SSA_1383 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 125717476 Common - hypothetical protein SSA_0618 1 None None None 125718823 Common rpsI 30S ribosomal protein S9 SSA_2033 226 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 125717492 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase SSA_0636 194 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 125719133 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA SSA_2359 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 125717041 Pathogen - hypothetical protein SSA_0163 1 None None None 125717345 Common - Cobalt ABC transporter, ATP-binding protein, putative SSA_0480 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 125718785 Common - Membrane spanning protein, putative SSA_1997 3 None None None 125718169 Common - hypothetical protein SSA_1354 72 COG0456 RimI, Acetyltransferases General function prediction only 125718702 Common - hypothetical protein SSA_1910 61 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125718714 Common - hypothetical protein SSA_1922 3 COG0456 RimI, Acetyltransferases General function prediction only 125718018 Common alkD DNA alkylation repair enzyme, putative SSA_1197 16 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 125718032 Common - hypothetical protein SSA_1211 9 COG4116 COG4116, Uncharacterized protein conserved in bacteria Function unknown 125717390 Pathogen - hypothetical protein SSA_0526 1 COG4812 EutT, Ethanolamine utilization cobalamin adenosyltransferase Amino acid transport and metabolism 125718581 Common - hypothetical protein SSA_1781 11 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 125717405 Common secA preprotein translocase subunit SecA SSA_0543 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 125718930 Common - Metallo-beta-lactamase, putative SSA_2146 160 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 125717333 Common - cobalt-precorrin-6Y C(5)-methyltransferase SSA_0468 66 COG2241 CobL, Precorrin-6B methylase 1 Coenzyme metabolism 125716928 Pathogen - hypothetical protein SSA_0045 1 None None None 125718329 Common rgpE Glycosyl transferase, putative SSA_1518 210 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125717273 Common - hypothetical protein SSA_0406 3 None None None 125718809 Common - Transcriptional regulator, MerR family (multidrug-efflux transporter genes), putative SSA_2022 68 COG0789 SoxR, Predicted transcriptional regulators Transcription 125717499 Pathogen - hypothetical protein SSA_0643 1 None None None 125717078 Common - ABC multidrug transporter (3-component subtilin immunity exporter), putative SSA_0201 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125718962 Pathogen - Conserved uncharacterized protein SSA_2179 1 None None None 125717837 Common msmF ABC transporter membrane-spanning permease-multiple sugars, putative SSA_1004 153 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 125718270 Common - Acetyltransferase, GNAT family, putative SSA_2384 16 COG0456 RimI, Acetyltransferases General function prediction only 125716959 Common - N-acetylneuraminate lyase, putative SSA_0078 232 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 125717307 Common - hypothetical protein SSA_0441 123 COG1309 AcrR, Transcriptional regulator Transcription 125718359 Common tex Transcriptional accessory ribonuclease (YqgFc, S1), putative SSA_1551 206 COG2183 Tex, Transcriptional accessory protein Transcription 125716921 Common purD phosphoribosylamine--glycine ligase SSA_0037 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 125718348 Common - hypothetical protein SSA_1540 14 COG4357 COG4357, Uncharacterized conserved protein Function unknown 125717162 Common - hypothetical protein SSA_0288 13 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 125717589 Common arc ornithine carbamoyltransferase SSA_0738 235 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 125717625 Common glgD Glycogen biosynthesis protein GlgD, putative SSA_0777 116 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 125718232 Common - putative glutathione S-transferase YghU SSA_1418 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 125717465 Common - ABC transporter, permease component, putative SSA_0607 4 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 125718473 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_1670 75 COG1309 AcrR, Transcriptional regulator Transcription 125718051 Pathogen - hypothetical protein SSA_1231 1 None None None 125718224 Common rmlC DTDP-4-keto-6-deoxyglucose-3,5-epimerase, putative SSA_1410 150 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 125718552 Common treR Transcriptional regulator, GntR family (repressor of trehalose operon), putative SSA_1753 113 COG2188 PhnF, Transcriptional regulators Transcription 125717810 Pathogen - hypothetical protein SSA_0973 1 None None None 125717549 Common - hypothetical protein SSA_0696 2 None None None 125718918 Common - hypothetical protein SSA_2134 4 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 125718220 Common cutC Copper homeostasis protein CutC, putative SSA_1405 57 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 125718240 Common - hypothetical protein SSA_1429 234 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 125716904 Common mreD Cell-shape determining protein MreD, putative SSA_0018 9 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 125717518 Common - Acetyltransferase, putative SSA_0663 59 COG2153 ElaA, Predicted acyltransferase General function prediction only 125717661 Common - Thioredoxin reductase, putative SSA_0813 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 125718084 Common rplS 50S ribosomal protein L19 SSA_1265 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 125718894 Common fusA elongation factor G SSA_2109 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 125717513 Common - Conserved uncharacterized protein SSA_0658 24 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 125717668 Common rpsU Ribosomal protein S21, putative SSA_0820 96 None None None 125717169 Common mleR Transcriptional regulator, LysR family, putative SSA_0295 157 COG0583 LysR, Transcriptional regulator Transcription 125717605 Common alaS alanyl-tRNA synthetase SSA_0756 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125719150 Common - ABC transporter with duplicated ATPase domains, putative SSA_2376 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 125718927 Pathogen - Conserved uncharacterized protein SSA_2143 2 None None None 125718207 Common - hypothetical protein SSA_1392 2 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 125717173 Common - hypothetical protein SSA_0299 70 COG1814 COG1814, Uncharacterized membrane protein Function unknown 125718948 Common - Glutamine amidotransferase, putative SSA_2164 120 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 125717054 Common pbp1b Penicillin-binding protein 1B, putative SSA_0175 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 125719144 Common - Zn-dependemt peptidase (insulinase), M16 family, putative SSA_2370 185 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 125716893 Common pth peptidyl-tRNA hydrolase SSA_0006 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 125717921 Common thyA thymidylate synthase SSA_1091 135 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 125717595 Pathogen - hypothetical protein SSA_0745 1 None None None 125718111 Pathogen - hypothetical protein SSA_1294 1 None None None 125717879 Common potA ABC transporter ATP-binding protein-spermidine/putrescine transport, putative SSA_1048 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 125716908 Common srtB Surface protein cell wall anchor, sortase_B family, putative SSA_0022 5 COG4509 COG4509, Uncharacterized protein conserved in bacteria Function unknown 125717855 Common - Glycosyl transferase, group 1, putative SSA_1022 51 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125717718 Common rodA Rod shape determining protein (cell-cycle protein), putative SSA_0875 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 125717559 Common rheA RNA helicase, putative SSA_0706 241 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 125717397 Common pduC Glycerol dehydratase large subunit pduC, putative SSA_0533 13 COG4909 PduC, Propanediol dehydratase, large subunit Secondary metabolites biosynthesis, transport, and catabolism 125718839 Common - Arabinose efflux permease, putative SSA_2050 193 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 125718565 Common - Conserved uncharacterized protein SSA_1765 56 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125718010 Common rnhB ribonuclease HII SSA_1188 210 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 125717645 Common - Transcriptional regulator, putative SSA_0797 6 None None None 125717798 Common - Possible ketopantoate reductase PanE/ApbA, putative SSA_0961 4 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 125717906 Common - hypothetical protein SSA_1076 20 COG3884 FatA, Acyl-ACP thioesterase Lipid metabolism 125717470 Common rgg Rgg protein, putative SSA_0612 7 None None None 125717964 Common pdhD Dihydrolipoamide dehydrogenase, putative SSA_1137 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 125718660 Common - hypothetical protein SSA_1862 133 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125718599 Common murC UDP-N-acetylmuramate--L-alanine ligase SSA_1800 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 125718597 Common - hypothetical protein SSA_1798 12 COG3153 COG3153, Predicted acetyltransferase General function prediction only 125718882 Pathogen - Conserved uncharacterized protein SSA_2094 1 None None None 125718771 Common - Transcriptional regulator, LytR/AlgR family, putative SSA_1982 6 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 125718778 Common - Zn-porter lipoprotein, putative SSA_1990 180 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 125719082 Common - Conserved uncharacterized protein SSA_2304 4 COG3881 COG3881, Uncharacterized protein conserved in bacteria Function unknown 125718600 Common - hypothetical protein SSA_1801 1 None None None 125717566 Common plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative SSA_0713 70 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 125717049 Pathogen - Cro-like transcriptional repressor, XRE family, putative SSA_0171 3 COG1476 COG1476, Predicted transcriptional regulators Transcription 125718692 Common - hypothetical protein SSA_1899 32 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 125717996 Common lplA Lipoate protein ligase A, putative SSA_1173 85 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 125716982 Common tgt queuine tRNA-ribosyltransferase SSA_0104 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 125716994 Common rpsQ 30S ribosomal protein S17 SSA_0116 225 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 125717874 Common - Xylanase/chitin deacetylase, putative SSA_1042 84 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 125718858 Common eep Zinc metalloprotease, putative SSA_2070 205 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 125718187 Pathogen - hypothetical protein SSA_1372 1 None None None 125718611 Common - Modification methylase, putative SSA_1812 58 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 125717941 Common - Two-component response transcriptional regulator (CheY-like receiver domain and a winged-helix DNA-binding domains), putative SSA_1113 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125718613 Common - hypothetical protein SSA_1814 2 None None None 125717737 Common - ATP-binding cassette transporter-like protein, putative SSA_0895 173 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 125717783 Common pstB2 Phosphate import ATP-binding protein pstB 2, putative SSA_0944 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 125718759 Common ilvH acetolactate synthase 3 regulatory subunit SSA_1969 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 125718065 Common cpsY Transcriptional regulator, LysR family, putative SSA_1245 179 COG0583 LysR, Transcriptional regulator Transcription 125718435 Common - hypothetical protein SSA_1630 3 None None None 125718379 Pathogen - hypothetical protein SSA_1572 1 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 125717090 Common - Phenylalanyl-tRNA synthetase, beta subunit, putative SSA_0212 187 COG0073 ARC1, EMAP domain General function prediction only 125719051 Common - hypothetical protein SSA_2272 9 COG4495 COG4495, Uncharacterized protein conserved in bacteria Function unknown 125718742 Common - ABC-type oligopeptide transport system, periplasmic component, putative SSA_1950 156 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 125717227 Common - Dipeptidase, putative SSA_0356 24 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 125717835 Common - Alpha-galactosidase, putative SSA_1002 48 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 125717923 Common clpX ATP-dependent protease ATP-binding subunit SSA_1093 226 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 125717561 Common - hypothetical protein SSA_0708 18 COG1755 COG1755, Uncharacterized protein conserved in bacteria Function unknown 125718096 Common - Rhodanese-like domain protein, putative SSA_1278 133 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 125717415 Common - Conserved hypothetical cytosolic protein SSA_0555 4 None None None 125717388 Common - Microcompartment protein, putative SSA_0524 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 125717324 Pathogen - hypothetical protein SSA_0459 1 None None None 125718363 Common gdh glucose-6-phosphate 1-dehydrogenase SSA_1555 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 125716978 Common polA DNA polymerase I SSA_0100 217 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 125718396 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_1590 27 COG1309 AcrR, Transcriptional regulator Transcription 125718269 Common - hypothetical protein SSA_1458 12 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 125718454 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase SSA_1650 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 125718832 Common - hypothetical protein SSA_2042 39 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 125718609 Common csrR Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative SSA_1810 204 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125718678 Common glyQ glycyl-tRNA synthetase subunit alpha SSA_1880 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 125718944 Common - hypothetical protein SSA_2159 5 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125718383 Common ccpA Catabolite control protein A, putative SSA_1576 128 COG1609 PurR, Transcriptional regulators Transcription 125717994 Common xerS site-specific tyrosine recombinase XerS SSA_1171 218 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 125718755 Pathogen - conserved uncharacterized protein SSA_1964 1 None None None 125717579 Common - Protease, putative SSA_0728 49 COG4449 COG4449, Predicted protease of the Abi (CAAX) family General function prediction only 125717572 Common sodA Mn/Fe-dependent superoxide dismutase, putative SSA_0721 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 125718276 Common - Conserved uncharacterized protein SSA_1465 10 COG3679 COG3679, Uncharacterized conserved protein Function unknown 125719110 Common dltX D-Ala-teichoic acid biosynthesis protein, putative SSA_2335 3 None None None 125718330 Common - Polysaccharide/teichoic acid transporter, putative SSA_1519 7 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 125718466 Common cpbA Collagen-binding protein A SSA_1663 50 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125718302 Common map methionine aminopeptidase SSA_1491 233 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 125717101 Common - hypothetical protein SSA_0224 3 None None None 125719041 Common argS arginyl-tRNA synthetase SSA_2262 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125717653 Common - Collagen-binding surface protein, putative SSA_0805 10 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125718716 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_1924 15 COG1309 AcrR, Transcriptional regulator Transcription 125719119 Common - hypothetical protein SSA_2345 14 COG1309 AcrR, Transcriptional regulator Transcription 125716901 Common ftsH Membrane ATPase FtsH, degrades sigma32 (integral membrane cell-division Zn metallo-peptidase), putative SSA_0015 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 125718496 Common lacD tagatose 1,6-diphosphate aldolase SSA_1696 25 COG3684 LacD, Tagatose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 125717168 Pathogen - hypothetical protein SSA_0294 1 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 125718482 Common - ABC-type bacitracin resistance protein A, ATPase component, putative SSA_1681 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125718486 Common - Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative SSA_1685 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125716971 Common ntpB V-type ATP synthase subunit B SSA_0092 247 COG1156 NtpB, Archaeal/vacuolar-type H+-ATPase subunit B Energy production and conversion 125717769 Common - ABC-type multidrug transporter, ATPase and permease components, putative SSA_0929 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125719079 Common lytB S-layer protein/ peptidoglycan endo-beta-N-acetylglucosaminidase, putative SSA_2301 5 COG4193 LytD, Beta- N-acetylglucosaminidase Carbohydrate transport and metabolism 125718573 Common - hypothetical protein SSA_1773 23 COG3601 COG3601, Predicted membrane protein Function unknown 125719106 Common dltD D-alanine transfer protein, putative SSA_2331 12 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 125718185 Common - CAAX amino terminal protease family, putative SSA_1370 25 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 125717352 Common - delta-aminolevulinic acid dehydratase SSA_0487 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 125718373 Common - Polar amino acid ABC transporter, ATP-binding protein, putative SSA_1566 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 125717139 Common pepO Zinc metalloproteinase in scaA 5'region, putative SSA_0263 63 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 125717999 Common acoB Acetoin dehydrogenase, E1 component, beta subunit, putative SSA_1176 189 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 125718627 Common glpF Glycerol uptake facilitator protein, putative SSA_1828 134 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 125719045 Common malQ 4-alpha-glucanotransferase, putative SSA_2266 120 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 125719035 Pathogen - hypothetical protein SSA_2256 1 None None None 125717982 Common - PvaA-like protein, putative SSA_1157 8 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 125718735 Common lysC aspartate kinase SSA_1943 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 125717777 Common - hypothetical protein SSA_0938 11 COG4476 COG4476, Uncharacterized protein conserved in bacteria Function unknown 125717386 Common - Ethanolamine utilization protein, putative SSA_0522 5 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 125717365 Common - Peptide ABC transporter, permease protein, putative SSA_0500 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 125718524 Common livF Branched-chain amino acid ABC transporter, ATP-binding protein, putative SSA_1725 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 125717211 Common mvaA Hydroxymethylglutaryl-CoA reductase, putative SSA_0337 51 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 125716936 Common - Beta-galactosidase, putative SSA_0053 24 COG1874 LacA, Beta-galactosidase Carbohydrate transport and metabolism 125717747 Common crpC CshA-like fibrillar surface protein C SSA_0906 57 None None None 125717724 Pathogen - Lipoprotein, putative SSA_0881 1 None None None 125718422 Common - hypothetical protein SSA_1617 12 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 125718291 Common - hypothetical protein SSA_1480 147 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 125718656 Common - hypothetical protein SSA_1858 11 COG4474 COG4474, Uncharacterized protein conserved in bacteria Function unknown 125716960 Common glk ROK family protein, putative SSA_0079 166 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 125718866 Common - hypothetical protein SSA_2078 30 COG3711 BglG, Transcriptional antiterminator Transcription 125718667 Common rheB ATP-dependent RNA helicase, putative SSA_1869 241 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 125717299 Common - Formate--tetrahydrofolate ligase, putative SSA_0432 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 125717598 Common - Sugar:H+ symporter, permease of the major facilitator superfamily, putative SSA_0748 32 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 125717920 Common glcK Glucokinase, putative SSA_1090 152 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 125716984 Common rpsJ 30S ribosomal protein S10 SSA_0106 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 125717697 Common - hypothetical protein SSA_0854 26 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 125718397 Common - Dipeptidase, putative SSA_1591 22 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 125718845 Common - Cinnamoyl ester hydrolase, putative SSA_2056 77 COG2267 PldB, Lysophospholipase Lipid metabolism 125718932 Common - Alkaline shock stress response protein, putative SSA_2148 23 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 125718086 Common crcB2 crcB-like protein 2, putative SSA_1267 143 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 125718695 Common trmB tRNA (guanine-N(7))-methyltransferase SSA_1902 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 125717081 Common nisR Nisin biosynthesis two-component response transcriptional regulator nisR, putative SSA_0204 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125718316 Common - hypothetical protein SSA_1505 25 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 125718825 Common - Conserved uncharacterized protein SSA_2035 58 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 125718192 Common asnC asparaginyl-tRNA synthetase SSA_1377 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 125717068 Common - Competence protein ComGF, putative SSA_0189 2 COG4940 ComGF, Competence protein ComGF Intracellular trafficking and secretion 125719141 Common stpA ABC-type cobalt transport system, ATPase component, putative SSA_2367 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 125718873 Common - Glyoxylate reductase, NADH-dependent, putative SSA_2085 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 125718687 Pathogen - hypothetical protein SSA_1892 1 None None None 125718077 Common - hypothetical protein SSA_1257 2 None None None 125719117 Common - hypothetical protein SSA_2343 38 COG1511 COG1511, Predicted membrane protein Function unknown 125718123 Common trkH2 Trk transporter membrane-spanning protein-K+ transport, putative SSA_1307 86 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 125717547 Common mutT Mutator protein, putative SSA_0694 63 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125718343 Common gor glutathione reductase SSA_1533 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 125717313 Common uvrA excinuclease ABC subunit A SSA_0448 240 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 125719046 Common malR Lactose operon transcriptional repressor, LacI family, putative SSA_2267 128 COG1609 PurR, Transcriptional regulators Transcription 125718502 Pathogen - hypothetical protein SSA_1702 2 None None None 125718299 Common - Multiple antibiotic resistance operon transcription repressor (MarR), putative SSA_1488 24 COG1846 MarR, Transcriptional regulators Transcription 125718116 Common - Maltose ABC transporter, permease protein, putative SSA_1300 158 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 125717826 Common - hypothetical protein SSA_0993 70 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125718321 Common rgpA Rhamnosyltransferase, putative SSA_1510 28 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 125717115 Common - 7,8-dihydro-8-oxoguanine-triphosphatase, putative SSA_0239 15 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125717540 Common fur Fe2+/Zn2+ uptake regulation protein, putative SSA_0686 173 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 125717616 Common nrdF ribonucleotide-diphosphate reductase subunit beta SSA_0768 143 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 125717534 Common recN DNA repair and genetic recombination, putative SSA_0679 208 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 125717844 Common - hypothetical protein SSA_1011 15 None None None 125717250 Pathogen - hypothetical protein SSA_0381 1 None None None 125718578 Common scpB segregation and condensation protein B SSA_1778 155 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 125719139 Common - Cobalt transport protein cbiQ, putative SSA_2365 69 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 125717196 Common - Transcriptional activator, TipA family, putative SSA_0322 137 COG0789 SoxR, Predicted transcriptional regulators Transcription 125718213 Common hlyIII Membrane protein, hemolysin III-like, putative SSA_1398 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 125718141 Common - Ketoacyl reductase hetN, putative SSA_1325 29 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 125717529 Common xseA exodeoxyribonuclease VII large subunit SSA_0674 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 125718139 Pathogen - hypothetical protein SSA_1323 3 None None None 125716924 Common - hypothetical protein SSA_0041 1 None None None 125718174 Common - Arginine/histidine ABC transporter, permease component, putative SSA_1359 191 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125719093 Common - General secretory pathway protein F, putative SSA_2316 145 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 125717730 Pathogen - hypothetical protein SSA_0887 1 None None None 125717335 Common cobM Precorrin-4 methylase, putative SSA_0470 202 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 125718538 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase SSA_1739 209 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 125718049 Pathogen - hypothetical protein SSA_1229 1 None None None 125717278 Common - hypothetical protein SSA_0411 2 None None None 125718208 Pathogen - hypothetical protein SSA_1393 1 None None None 125716891 Common - Lipoprotein, putative SSA_0004 8 COG4808 COG4808, Uncharacterized protein conserved in bacteria Function unknown 125717802 Common mocA Oxidoreductase, putative SSA_0965 132 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 125718796 Common hrcA heat-inducible transcription repressor SSA_2009 148 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 125717488 Common trpE Anthranilate synthase component I, putative SSA_0632 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 125718531 Common upp uracil phosphoribosyltransferase SSA_1732 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 125718620 Common rimL Acetyltransferase (N-acetylase of ribosomal proteins), putative SSA_1821 132 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125717732 Common - Isoleucyl-tRNA synthetase, putative SSA_0889 1 None None None 125719030 Common - hypothetical protein SSA_2251 7 None None None 125718357 Common - hypothetical protein SSA_1549 17 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 125717350 Common - Porphobilinogen deaminase, putative SSA_0485 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 125717076 Common folE GTP cyclohydrolase I SSA_0199 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 125717466 Common mefE Macrolide-efflux protein, putative SSA_0608 147 None None None 125716931 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_0048 33 COG1309 AcrR, Transcriptional regulator Transcription 125717170 Common - Transcriptional regulator, XRE family, putative SSA_0296 24 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 125717629 Common pmi Mannose-6-phosphate isomerase, putative SSA_0781 50 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 125717891 Pathogen - hypothetical protein SSA_1060 1 None None None 125717432 Common - Dehydrogenase, putative SSA_0572 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 125719006 Common - Phosphotyrosine-protein phosphatase, putative SSA_2224 40 COG4464 CapC, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 125717580 Pathogen - hypothetical protein SSA_0729 1 None None None 125717289 Common - Phosphoglycerate mutase family protein, putative SSA_0422 152 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125717781 Common pstC1 ABC transporter membrane-spanning permease-phosphate transport, putative SSA_0942 226 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 125717573 Common - hypothetical protein SSA_0722 6 COG2367 PenP, Beta-lactamase class A Defense mechanisms 125718255 Common hisB imidazoleglycerol-phosphate dehydratase SSA_1445 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 125717497 Pathogen - hypothetical protein SSA_0641 1 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 125718856 Common - Superfamily I DNA and RNA helicases, putative SSA_2068 29 None None None 125717524 Common clpE ATP dependent protease, putative SSA_0669 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 125716957 Common - ABC sugar transporter, permease protein, putative SSA_0076 173 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 125717896 Common - Beta-hexosamidase A, putative SSA_1065 184 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 125717461 Common - Cobalt transporter, putative SSA_0603 51 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 125718704 Pathogen - hypothetical protein SSA_1912 1 None None None 125716938 Common - PTS system, IIC component, putative SSA_0055 37 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 125717902 Common proB gamma-glutamyl kinase SSA_1072 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 125717063 Common comYA Competence protein ComYA, putative SSA_0184 210 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 125717014 Common adcR Multiple antibiotic resistance operon transcriptional repressor (MarR), putative SSA_0135 8 COG1846 MarR, Transcriptional regulators Transcription 125717051 Common rrmA 23S rRNA m1G745 methyltransferase, putative SSA_0173 66 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125717490 Common trpD anthranilate phosphoribosyltransferase SSA_0634 221 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 125718631 Common - hypothetical protein SSA_1832 16 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 125717019 Common ctpA Copper-translocating P-type ATPase, putative SSA_0140 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 125717482 Common coaD phosphopantetheine adenylyltransferase SSA_0625 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 125718969 Common - Conserved hypothetical membrane associated protein SSA_2187 2 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 125717343 Common cbiN Cobalt transport protein cbiN, putative SSA_0478 40 COG1930 CbiN, ABC-type cobalt transport system, periplasmic component Inorganic ion transport and metabolism 125718030 Common ppnK inorganic polyphosphate/ATP-NAD kinase SSA_1209 236 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 125718690 Common infB translation initiation factor IF-2 SSA_1896 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 125718764 Common - ABC-type multidrug transport system, permease component, putative SSA_1974 65 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 125717479 Common - Transcriptional regulator (XRE family), SOS-response transcriptional repressors (RecA-mediated autopeptidases), putative SSA_0622 12 COG2932 COG2932, Predicted transcriptional regulator Transcription 125717792 Common pepN Aminopeptidase N, putative SSA_0955 165 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 125717203 Common - Glycerol uptake facilitator/aquaporin protein, putative SSA_0329 132 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 125717883 Pathogen - hypothetical protein SSA_1052 1 None None None 125717714 Common ftsX Cell division protein FtsX, putative SSA_0871 38 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 125718554 Pathogen - hypothetical protein SSA_1755 1 None None None 125717403 Common - Glycerol uptake facilitator protein, putative SSA_0540 133 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 125717370 Common - Iron-sulfur cluster-binding protein, putative SSA_0506 139 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 125717459 Common - Phosphorylase, Pnp/Udp family, putative SSA_0601 37 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 125717008 Common infA translation initiation factor IF-1 SSA_0129 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 125718242 Common - hypothetical protein SSA_1431 3 COG4468 GalT, Galactose-1-phosphate uridyltransferase Carbohydrate transport and metabolism 125717185 Common - hypothetical protein SSA_0311 34 COG4335 COG4335, DNA alkylation repair enzyme DNA replication, recombination, and repair 125718808 Common - hypothetical protein SSA_2021 24 COG3804 COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase Function unknown 125717266 Pathogen - hypothetical protein SSA_0397 2 None None None 125717914 Common - Conserved uncharacterized protein SSA_1084 52 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 125718012 Common - Conserved uncharacterized protein SSA_1190 40 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 125717302 Common hutU urocanate hydratase SSA_0435 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 125718134 Common lepA GTP-binding protein LepA SSA_1318 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 125717789 Pathogen - hypothetical protein SSA_0950 1 None None None 125718167 Pathogen - hypothetical protein SSA_1352 1 None None None 125718741 Common - AliA protein, putative SSA_1949 161 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 125718671 Common mraW S-adenosyl-methyltransferase MraW SSA_1873 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 125719015 Common cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase, phospholipase D family, putative SSA_2234 144 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 125717454 Common - Transcriptional regulator, AraC family, putative SSA_0594 120 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 125717031 Pathogen - hypothetical protein SSA_0153 1 None None None 125717424 Common - aminotransferase AlaT SSA_0564 234 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 125717029 Pathogen - hypothetical protein SSA_0151 1 None None None 125719004 Common - Tyrosine-protein kinase Wze, putative SSA_2222 197 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 125717749 Common - ABC-type uncharacterized transport system, periplasmic component, putative SSA_0908 55 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 125717242 Common pyrDA dihydroorotate dehydrogenase 1A SSA_0373 189 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 125717620 Common ptsH Histidine-containing phosphocarrier protein of the PTS, putative SSA_0772 121 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 125717501 Common - hypothetical protein SSA_0646 8 COG4483 COG4483, Uncharacterized protein conserved in bacteria Function unknown 125718336 Common - hypothetical protein SSA_1526 30 COG2035 COG2035, Predicted membrane protein Function unknown 125718002 Common - hypothetical protein SSA_1180 14 COG4947 COG4947, Uncharacterized protein conserved in bacteria Function unknown 125718113 Common uvrC excinuclease ABC subunit C SSA_1297 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 125717593 Common argR Transcriptional repressor (arginine synthesis), putative SSA_0743 54 COG1438 ArgR, Arginine repressor Transcription 125718417 Common dgk Diacylglycerol kinase, putative SSA_1612 100 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 125717568 Common comEA DNA uptake protein, putative SSA_0715 133 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 125718211 Common - hypothetical protein SSA_1396 4 None None None 125717038 Common - hypothetical protein SSA_0160 4 None None None 125716950 Pathogen - Hypothetical protein, possibly membrane-associated SSA_0069 1 None None None 125718977 Common nadR ATPase/kinase, putative SSA_2195 26 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 125718196 Pathogen - hypothetical protein SSA_1381 1 None None None 125718903 Common rpe Pentose-5-phosphate-3-epimerase, putative SSA_2119 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 125718712 Common - Phosphotransferase system, mannose-specific EIID, putative SSA_1920 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 125719146 Common - hypothetical protein SSA_2372 15 COG2501 COG2501, Uncharacterized conserved protein Function unknown 125717103 Common groEL chaperonin GroEL SSA_0226 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 125717249 Common - Enzyme of poly-gamma-glutamate biosynthesis (capsule formation), putative SSA_0380 67 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 125717556 Common - methylcitrate synthase SSA_0703 194 COG0372 GltA, Citrate synthase Energy production and conversion 125718950 Common - ABC-type multidrug transporter, ATPase and permease components, putative SSA_2166 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718513 Common serA D-3-phosphoglycerate dehydrogenase, putative SSA_1713 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 125718583 Common - putative deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein SSA_1783 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 125717156 Common - Phosphotransferase system (PTS), cellobiose-specific IIA component, putative SSA_0282 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 125717587 Common - Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, putative SSA_0736 72 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 125717418 Common - Conserved hypothetical cytosolic protein, putative SSA_0558 2 None None None 125717288 Common - Phosphoglycerate mutase family protein, putative SSA_0421 160 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125718896 Common rpsL 30S ribosomal protein S12 SSA_2111 235 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 125717753 Common pheS phenylalanyl-tRNA synthetase subunit alpha SSA_0912 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 125718495 Common - Transcriptional antiterminator, BglG/SacY family (induction of sugar metabolism), putative SSA_1695 29 COG3711 BglG, Transcriptional antiterminator Transcription 125717755 Common pheT phenylalanyl-tRNA synthetase subunit beta SSA_0914 247 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 125718639 Common pplB Cof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative SSA_1841 219 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 125717658 Common - hypothetical protein SSA_0810 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 125717120 Common - hypothetical protein SSA_0244 2 None None None 125717472 Common - Transporter, putative SSA_0614 7 None None None 125718592 Common - Histidine kinase (sensor protein), putative SSA_1793 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 125717908 Common - hypothetical protein SSA_1078 9 COG4478 COG4478, Predicted membrane protein Function unknown 125717947 Common - Two-component response transcriptional regulator (CheY-like receiver and AraC-type DNA-binding domains), putative SSA_1119 223 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 125718590 Common acyP Acylphosphatase, putative SSA_1791 22 COG1254 AcyP, Acylphosphatases Energy production and conversion 125716992 Common rplP 50S ribosomal protein L16 SSA_0114 218 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 125717641 Common endA DNA-entry nuclease, putative SSA_0793 5 None None None 125718029 Common - 23S rRNA pseudouridine synthase, putative SSA_1208 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 125718941 Common - Conserved uncharacterized protein SSA_2156 75 COG2013 COG2013, Uncharacterized conserved protein Function unknown 125718158 Common carA carbamoyl phosphate synthase small subunit SSA_1342 239 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 162139837 Common ulaD 3-keto-L-gulonate-6-phosphate decarboxylase SSA_2090 51 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 125717238 Pathogen - hypothetical protein SSA_0368 1 None None None 125718602 Common engA GTP-binding protein EngA SSA_1803 230 COG1160 COG1160, Predicted GTPases General function prediction only 125718884 Common - Amino acid ABC transporter, ATP-binding protein, putative SSA_2097 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 125717962 Common norM Na+-driven multidrug efflux pump, putative SSA_1135 122 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 125718647 Common priA primosome assembly protein PriA SSA_1849 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 125717716 Common dinG ATP-dependent DNA helicase; DNA polymerase III, epsilon subunit, putative SSA_0873 170 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 125717647 Pathogen - hypothetical protein SSA_0799 1 COG5416 COG5416, Uncharacterized integral membrane protein Function unknown 125718925 Common argH argininosuccinate lyase SSA_2141 231 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 125718366 Common - Conserved uncharacterized protein SSA_1559 112 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125717127 Common dtd D-tyrosyl-tRNA deacylase SSA_0251 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 125718053 Common - hypothetical protein SSA_1233 170 COG0344 COG0344, Predicted membrane protein Function unknown 125718340 Common - ABC-type antimicrobial peptide transport system, permease component, putative SSA_1530 187 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 125716923 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit SSA_0040 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 125718226 Pathogen - hypothetical protein SSA_1412 1 None None None 125717955 Common - Voltage gated chloride channel EriC, putative SSA_1128 150 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 125718469 Common - Collagen-binding surface protein, putative SSA_1666 12 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125717969 Common - Beta-N-acetylhexosaminidase, putative SSA_1144 46 COG3525 Chb, N-acetyl-beta-hexosaminidase Carbohydrate transport and metabolism 125717853 Pathogen - hypothetical protein SSA_1020 1 None None None 125718401 Common tehB tellurite resistance protein TehB SSA_1595 68 COG3615 TehB, Uncharacterized protein/domain, possibly involved in tellurite resistance Inorganic ion transport and metabolism 125718217 Common - ABC-type multidrug transport system, ATPase and permease components, putative SSA_1402 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718020 Common - Phosphinothricin acetyltransferase, putative SSA_1199 113 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 125718126 Common rpsP 30S ribosomal protein S16 SSA_1310 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 125718406 Pathogen - hypothetical protein SSA_1600 1 None None None 125718992 Common - Ribosomal large subunit pseudouridine synthase D, putative SSA_2210 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 125718955 Common - hypothetical protein SSA_2171 59 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 125718320 Common rgpB Polysaccharide biosynthesis protein/ rhamnosyltransferase, putative SSA_1509 160 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125717175 Common - hypothetical protein SSA_0301 8 None None None 125718239 Common - hypothetical protein SSA_1428 72 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 125718222 Common - hypothetical protein SSA_1408 3 None None None 125718205 Pathogen - hypothetical protein SSA_1390 1 None None None 125719155 Common - hypothetical protein SSA_2380 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 125718527 Common livH ABC transporter membrane-spanning permease-branched chain amino acid transport, putative SSA_1728 153 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 125718480 Common cylA ABC-type multidrug transport system, ATPase component, putative SSA_1679 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125718980 Common - hypothetical protein SSA_2198 9 None None None 125717105 Pathogen - hypothetical protein SSA_0228 1 None None None 125717512 Common - PyridoxaL 5'-phosphate Dependent Enzymes class III, putative SSA_0657 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 125717615 Common - Diacylglycerol kinase catalytic domain protein, putative SSA_0767 114 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 125717251 Common - Transcriptional regulator, AraC family (arabinose-binding/dimerisation), putative SSA_0382 155 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 125718792 Common dnaJ Chaperone protein dnaJ, putative SSA_2005 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 125717607 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein SSA_0758 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 125718813 Pathogen - hypothetical protein SSA_2388 1 None None None 125717663 Common - hypothetical protein SSA_0815 25 COG3759 COG3759, Predicted membrane protein Function unknown 125717208 Common mvaD Diphosphomevalonate decarboxylase, putative SSA_0334 28 COG3407 MVD1, Mevalonate pyrophosphate decarboxylase Lipid metabolism 125718259 Common hisC histidinol-phosphate aminotransferase SSA_1449 236 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 125717198 Common - Conserved uncharacterized protein SSA_0324 2 None None None 125717574 Pathogen - hypothetical protein SSA_0723 1 None None None 125718103 Pathogen - hypothetical protein SSA_1285 2 None None None 125718443 Common pfs 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SSA_1639 105 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 125718675 Pathogen - hypothetical protein SSA_1877 1 None None None 125717152 Common - Pyruvate formate-lyase 3, putative SSA_0277 73 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 125717931 Pathogen - hypothetical protein SSA_1102 1 None None None 125717621 Common ptsI PTS enzyme I, putative SSA_0773 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 125718789 Common thiD phosphomethylpyrimidine kinase SSA_2001 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 125718219 Common - hypothetical protein SSA_1404 12 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 125717509 Common divIB Cell division protein DivIB, putative SSA_0654 11 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 125717679 Common - Accessory secretory protein Asp2, putative SSA_0834 5 None None None 125718957 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative SSA_2174 236 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 125717117 Common prmA ribosomal protein L11 methyltransferase SSA_0241 180 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 125717018 Common - Copper transport operon or penicillinase transcriptional repressor, putative SSA_0139 20 COG3682 COG3682, Predicted transcriptional regulator Transcription 125717601 Common - Oligoendopeptidase F, putative SSA_0751 87 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 125717706 Common - Cof family protein, putative SSA_0863 139 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125718966 Common - hypothetical protein SSA_2184 215 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 125718088 Common - hypothetical protein SSA_1269 188 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 125718099 Common - Uracil-DNA glycosylase, putative SSA_1281 56 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 125717842 Common galT galactose-1-phosphate uridylyltransferase SSA_1009 14 COG4468 GalT, Galactose-1-phosphate uridyltransferase Carbohydrate transport and metabolism 125718870 Pathogen - hypothetical protein SSA_2081 1 None None None 125719077 Pathogen - hypothetical protein SSA_2299 1 None None None 125718585 Common - Conserved uncharacterized protein SSA_1786 4 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 125718897 Pathogen - hypothetical protein SSA_2112 1 None None None 125717746 Common crpB CshA-like fibrillar surface protein B SSA_0905 67 None None None 125718300 Pathogen - hypothetical protein SSA_1489 1 None None None 125718794 Common dnaK Chaperone protein dnaK/HSP70, putative SSA_2007 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 125718533 Common - Cation (Mg/Ni uptake) transport ATPase, putative SSA_1734 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 125717096 Common - Sugar-binding periplasmic protein, putative SSA_0218 72 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 125718685 Common - Acetyltransferase, putative SSA_1890 7 COG0456 RimI, Acetyltransferases General function prediction only 125718740 Common - Oligopeptide-binding lipoprotein precursor, putative SSA_1948 152 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 125716989 Common rpsS 30S ribosomal protein S19 SSA_0111 243 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 125717311 Common - hypothetical protein SSA_0446 8 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 125716980 Common - hypothetical protein SSA_0102 12 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 125718657 Common recU Holliday junction-specific endonuclease SSA_1859 17 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 125718078 Common deoD Purine nucleoside phosphorylase, family 1, putative SSA_1258 93 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 125717002 Common rplR 50S ribosomal protein L18 SSA_0123 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 125717684 Pathogen - hypothetical protein SSA_0839 1 None None None 125716949 Common adhE Alcohol-acetaldehyde dehydrogenase, putative SSA_0068 187 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 125719096 Pathogen - hypothetical protein SSA_2320 1 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 125717449 Common dapE Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (M20/M25/M40 family peptidase), putative SSA_0589 178 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 125718855 Pathogen - hypothetical protein SSA_2067 1 None None None 125718843 Pathogen - hypothetical protein SSA_2054 1 None None None 125718864 Common - putative L-ascorbate 6-phosphate lactonase SSA_2076 33 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 125718709 Common adh alcohol dehydrogenase SSA_1917 214 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 125718493 Common lacE Phosphotransferase system lactose-specific component IIBC, putative SSA_1693 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 125717977 Common prfA peptide chain release factor 1 SSA_1152 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 125717065 Common comYC Competence protein ComYC, putative SSA_0186 4 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 125717413 Pathogen - hypothetical protein SSA_0553 1 None None None 125717731 Common - Magnesium/cobalt transporter, putative SSA_0888 170 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 125717394 Common eutH Ethanolamine utilization protein (transporter), putative SSA_0530 18 COG3192 EutH, Ethanolamine utilization protein Amino acid transport and metabolism 125719031 Common - hypothetical protein SSA_2252 4 None None None 125717367 Common - Peptide ABC transporter, ATP-binding protein, putative SSA_0503 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 125718749 Common rgpG Glycosyl transferase N-acetylglucosaminyltransferase, putative SSA_1957 219 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 125717558 Common - hypothetical protein SSA_0705 1 None None None 125718190 Common - Multidrug ABC transporter, ATPase and permease components, putative SSA_1375 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125718068 Common - hypothetical protein SSA_1248 4 COG1567 COG1567, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 125717381 Common - Sensor histidine kinase, putative SSA_0517 99 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 125717805 Pathogen - hypothetical protein SSA_0968 1 None None None 125718125 Common - RNA-binding protein (KH domain), putative SSA_1309 15 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 125716966 Pathogen ntpE V-type sodium ATPase, subunit E, putative SSA_0087 3 COG1390 NtpE, Archaeal/vacuolar-type H+-ATPase subunit E Energy production and conversion 125717148 Common - Oxidoreductase, aldo/keto reductase family, putative SSA_0272 195 COG4989 COG4989, Predicted oxidoreductase General function prediction only 125718156 Common - Zn/Mn ABC-type porter lipoprotein, putative SSA_1340 178 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 125716998 Common rpsN 30S ribosomal protein S14 SSA_2391 198 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 125718027 Common mutY A/G-specific adenine glycosylase, putative SSA_1206 211 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 125718457 Pathogen - hypothetical protein SSA_1653 1 None None None 125717545 Common ddl D-alanyl-alanine synthetase A SSA_0691 215 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 125717824 Common - Deoxyribonuclease, putative SSA_0991 4 None None None 125716942 Common - tagatose 1,6-diphosphate aldolase SSA_0061 26 COG3684 LacD, Tagatose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 125718543 Common - Iron compound ABC transporter, permease protein, putative SSA_1744 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 125717849 Common - phosphoenolpyruvate synthase SSA_1016 153 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 125717243 Common - Peptide methionine sulfoxide reductase msrA/msrB, putative SSA_0374 206 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 125717043 Pathogen - hypothetical protein SSA_0165 1 None None None 125717504 Common - Ribosomal small subunit pseudouridine synthase A, putative SSA_0649 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 125718308 Common comEB DCMP deaminase, putative SSA_1497 91 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 125719052 Pathogen - hypothetical protein SSA_2273 1 None None None 125717657 Common - Translation initiation inhibitor, yjgF family / endoribonuclease L-PSP, putative SSA_0809 172 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 125718333 Common ftsW Cell division protein FtsW, putative SSA_1522 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 125718727 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II SSA_1935 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 125718201 Common - NADPH-dependent FMN reductase, putative SSA_1386 100 COG0431 COG0431, Predicted flavoprotein General function prediction only 125718504 Common - Conserved uncharacterized protein SSA_1704 46 COG2323 COG2323, Predicted membrane protein Function unknown 125717649 Common - Mur ligase family protein, putative SSA_0801 76 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 125717527 Common - hypothetical protein SSA_0672 11 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 125717222 Common spi Signal peptidase I, putative SSA_0351 109 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 125717794 Common - Dehydrogenase, putative SSA_0957 206 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 125718170 Pathogen - hypothetical protein SSA_1355 1 None None None 125717235 Common - Small-conductance mechanosensitive efflux channel, putative SSA_0365 153 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 125717355 Common - Cobalamin 5'-phosphate synthase, putative SSA_0490 116 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 125718060 Common pyrE orotate phosphoribosyltransferase SSA_1240 176 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 125717039 Common - hypothetical protein SSA_0161 9 None None None 125718934 Common - hypothetical protein SSA_2149 5 None None None 125718195 Pathogen - hypothetical protein SSA_1380 1 None None None 125718737 Common - Oligopeptide transport ATP-binding protein, putative SSA_1945 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 125719108 Common dltB Integral membrane protein, putative SSA_2333 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 125717337 Common - Precorrin-3B C17-methyltransferase, putative SSA_0472 170 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 125718445 Common - MutT/nudix family protein, putative SSA_1641 178 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 125718436 Common srtC Sortase-like protein, putative SSA_1631 24 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 125717966 Common pdhB Pyruvate dehydrogenase E1 component beta subunit, putative SSA_1139 193 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 125717260 Common spxB Pyruvate oxidase, putative SSA_0391 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 125718488 Common - NADH-binding ferric-oxidoreductase, putative SSA_1687 71 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 125717637 Common atpC F0F1 ATP synthase subunit epsilon SSA_0789 125 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 125718772 Pathogen - Cell surface SD repeat antigen precursor, putative SSA_1984 1 COG5099 COG5099, RNA-binding protein of the Puf family, translational repressor Translation, ribosomal structure and biogenesis 125717972 Common - Beta-glucosides PTS, EIIB, putative SSA_1147 32 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 125716907 Pathogen - hypothetical protein SSA_0021 1 None None None 125719073 Common - Integrase/recombinase, phage integrase family, putative SSA_2295 66 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 125719036 Common mutL DNA mismatch repair protein SSA_2257 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 125716912 Common acp Acyl carrier protein, putative SSA_0027 181 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 125718424 Common frr ribosome recycling factor SSA_1619 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 125718090 Common - Conserved uncharacterized protein SSA_1271 83 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 125717322 Common scrK Fructokinase, putative SSA_0457 29 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 125718275 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase SSA_1464 233 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 125718391 Common - hypothetical protein SSA_1585 56 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 125717246 Common - ABC-type methionine transporter, permease component, putative SSA_0377 100 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 125718399 Common - Dipeptidase, putative SSA_1593 22 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 125718615 Common - hypothetical protein SSA_1816 5 None None None 125718757 Common ilvA threonine dehydratase SSA_1967 219 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 125718753 Common - Amino acid ABC transporter, amino acid-binding protein/permease protein, putative SSA_1961 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125717721 Common gyrB DNA gyrase subunit B SSA_0878 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 125718479 Common cylB ABC-type multidrug transport system, permease component, putative SSA_1678 9 COG1511 COG1511, Predicted membrane protein Function unknown 125718361 Common - Permease, putative SSA_1553 95 COG0701 COG0701, Predicted permeases General function prediction only 125717022 Pathogen - Conserved uncharacterized protein SSA_0143 1 None None None 125719069 Pathogen - hypothetical protein SSA_2291 1 None None None 125717344 Common - CbiQ protein, putative SSA_0479 35 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 125717987 Pathogen - hypothetical protein SSA_1164 1 None None None 125718780 Common fba fructose-bisphosphate aldolase SSA_1992 179 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 125717551 Common prfC peptide chain release factor 3 SSA_0698 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 125717093 Common rbsB Periplasmic sugar-binding protein (ribose porter), putative SSA_0215 98 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 125719065 Common rpmF 50S ribosomal protein L32 SSA_2287 63 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 125717132 Common - Metalloregulator ScaR (Fe/Mn-dependent transcriptional repressor), putative SSA_0256 101 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 125719048 Common - hypothetical protein SSA_2269 80 COG1284 COG1284, Uncharacterized conserved protein Function unknown 125718385 Common - ABC-type Fe3+-siderophore transport system, permease component, putative SSA_1578 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 125717229 Common - hypothetical protein SSA_0358 13 None None None 125718827 Common trmH tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family, putative SSA_2037 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 125718263 Common - hypothetical protein SSA_1453 2 None None None 125717630 Common uncE Proton-translocating ATPase, F0 sector, subunit c, putative SSA_0782 8 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 125718368 Common rnc ribonuclease III SSA_1561 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 125718047 Common parC DNA topoisomerase IV subunit A SSA_1226 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 125716932 Common - Dihydroxyacetone kinase (Dak1), putative SSA_0049 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 125717693 Common sip Signal peptidase I, putative SSA_0849 37 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 125718811 Pathogen - hypothetical protein SSA_2024 1 None None None 125717027 Pathogen - hypothetical protein SSA_0149 1 None None None 125719154 Pathogen comC Competence stimulating peptide SSA_2394 1 None None None 125717107 Common - hypothetical protein SSA_0230 16 COG4292 COG4292, Predicted membrane protein Function unknown 125717057 Common epsC UDP-N-acetylglucosamine 2-epimerase, putative SSA_0178 155 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 125717178 Common - Bacterial cell wall degradation (CHAP/LysM domains), putative SSA_0304 8 COG3942 COG3942, Surface antigen General function prediction only 125718982 Common ctsR Firmicutes transcriptional repressor of class III stress genes (CtsR), putative SSA_2200 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 125718628 Common - RNA methyltransferase, putative SSA_1829 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 125718277 Common tyrA prephenate dehydrogenase SSA_1466 159 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 125718633 Common raiA 30S ribosomal interface protein S30EA, putative SSA_1834 170 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 125718943 Common - Methyltransferase, putative SSA_2158 4 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125718229 Common - Oxidoreductase, putative SSA_1415 77 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 125718511 Common nth Endonuclease III, putative SSA_1711 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 125717510 Common ftsA Cell division protein FtsA, putative SSA_0655 177 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 125718203 Pathogen - hypothetical protein SSA_1388 1 None None None 125717377 Common - ATP:cob(I)alamin adenosyltransferase, putative SSA_0513 129 COG2096 COG2096, Uncharacterized conserved protein Function unknown 125717642 Common - Zn-dependent protease, putative SSA_0794 2 COG5549 COG5549, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 125717330 Common cbiC precorrin-8X methylmutase SSA_0465 118 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 125718904 Common - GTPase, putative SSA_2120 163 COG1162 COG1162, Predicted GTPases General function prediction only 125717751 Common - ABC-type multidrug transporter, ATPase component, putative SSA_0910 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717771 Common - hypothetical protein SSA_0932 38 COG4487 COG4487, Uncharacterized protein conserved in bacteria Function unknown 125718133 Pathogen - hypothetical protein SSA_1317 1 None None None 125717569 Common comEC Competence protein, putative SSA_0716 134 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 125717439 Common - Hydrolase, HAD superfamily, putative SSA_0579 44 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 125717989 Common ylxM hypothetical protein SSA_1166 28 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 125717399 Common - B12-dependent diol dehydratase small subunit, putative SSA_0536 13 COG4910 PduE, Propanediol dehydratase, small subunit Secondary metabolites biosynthesis, transport, and catabolism 125718257 Common hisG ATP phosphoribosyltransferase catalytic subunit SSA_1447 210 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 125717799 Common lguL Lactoylglutathione lyase, putative SSA_0962 118 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 125717898 Common - hypothetical protein SSA_1067 7 COG0456 RimI, Acetyltransferases General function prediction only 125718171 Common uvrB excinuclease ABC subunit B SSA_1356 228 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 125718997 Common - Oligosaccharide repeat unit polymerase Wzy, putative SSA_2215 2 None None None 125717519 Common - Conserved uncharacterized protein SSA_0664 3 None None None 125717276 Common - ABC-type multidrug transport system, ATPase component, putative SSA_0409 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717814 Common leuC isopropylmalate isomerase large subunit SSA_0980 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 125718055 Common pyrC dihydroorotase SSA_1235 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 125719135 Common sdaB L-serine dehydratase beta subunit SSA_2361 156 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 125717154 Common - Sugar-binding transcriptional repressor (DeoR), putative SSA_0279 69 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 125718245 Pathogen - Conserved uncharacterized Firmicutes protein SSA_1434 1 None None None 125718328 Common cpsIaJ Cell-wall biogenesis glycosyltransferase, putative SSA_1517 215 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125718555 Pathogen - Conserved uncharacterized protein SSA_1756 1 None None None 125719086 Common - Fimbrial assembly protein, putative SSA_2309 15 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 125718886 Common - ABC-type arginine/histidine transporter, permease protein, putative SSA_2099 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 125717234 Common dctA Serine/threonine:Na+ symporter, putative SSA_0364 101 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 125718313 Common - Conserved uncharacterized protein (contains LysM, Lysin motif) SSA_1502 1 None None None 125717430 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A SSA_0570 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 125717871 Common - Sugar ABC transporter, ATP-binding protein, putative SSA_1039 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 125717286 Common - Alpha-galactosidase, putative SSA_0419 47 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 125718265 Common - Conserved hypothetical cytosolic protein SSA_1455 17 COG4283 COG4283, Uncharacterized conserved protein Function unknown 125719024 Common recA RecA protein, putative SSA_2245 217 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 125718350 Common - Peptidase, U32 family, putative SSA_1542 116 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 125718916 Common - Ure cluster protein, putative SSA_2132 1 None None None 125717998 Common acoC dihydrolipoamide acetyltransferase SSA_1175 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 125717650 Common - hypothetical protein SSA_0802 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 125718120 Common - hypothetical protein SSA_1304 6 None None None 125717868 Common deoC Deoxyribose-phosphate aldolase, putative SSA_1036 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 125717852 Common - Collagen-binding surface protein, putative SSA_1019 9 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125718835 Common - Uridine phosphorylase, putative SSA_2046 29 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 125718640 Common - Two-component response transcriptional regulator (CheY-like receiver and HTH DNA-binding domains), putative SSA_1842 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 125718014 Pathogen - hypothetical protein SSA_1192 1 None None None 125717968 Common norM2 Na+-driven multidrug efflux pump, putative SSA_1143 161 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 125716987 Common rplW 50S ribosomal protein L23 SSA_0109 167 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 125719148 Common guaB inositol-5-monophosphate dehydrogenase SSA_2374 239 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 125717172 Common - Malate permease, putative SSA_0298 67 COG0679 COG0679, Predicted permeases General function prediction only 125717904 Common proC Pyrroline-5-carboxylate reductase, putative SSA_1074 212 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 125717683 Common - GtfB, putative SSA_0838 3 None None None 125718249 Common hisK hypothetical protein SSA_1439 17 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 125718593 Common - Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative SSA_1794 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125718621 Common - hypothetical protein SSA_1822 2 None None None 125717201 Common - Glycosyltransferase, putative SSA_0327 2 None None None 125717881 Common potC ABC transporter membrane-spanning permease-spermidine/putrescine transport, putative SSA_1050 211 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 125717436 Common - Conserved GTPase, putative SSA_0576 34 COG1161 COG1161, Predicted GTPases General function prediction only 125717733 Common - 3-carboxymuconate cyclase, putative SSA_0891 54 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 125718707 Pathogen - hypothetical protein SSA_1915 1 None None None 125717353 Common - Glutamate-1-semialdehyde 2,1-aminotransferase, putative SSA_0488 236 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 125718984 Common tsf elongation factor Ts SSA_2202 215 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 125716918 Pathogen - hypothetical protein SSA_0034 1 None None None 125716911 Common plsX fatty acid/phospholipid synthesis protein SSA_0026 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 125717303 Common hutI imidazolonepropionase SSA_0436 120 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 125717452 Common - hypothetical protein SSA_0592 14 COG4720 COG4720, Predicted membrane protein Function unknown 125718286 Pathogen - hypothetical protein SSA_1475 1 None None None 125718404 Pathogen - hypothetical protein SSA_1598 1 None None None 125717455 Common - hypothetical protein SSA_0595 53 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 125718853 Common - hypothetical protein SSA_2065 124 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 125717011 Common rpsK 30S ribosomal protein S11 SSA_0131 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 125718253 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, putative SSA_1443 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 125718879 Common ptxA Phosphotransferase system sugar-specific EII component, putative SSA_2091 40 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 125718761 Common - hypothetical protein SSA_1971 3 None None None 125718541 Common - Ferrichrome-binding protein, putative SSA_1742 71 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 125718665 Common - ABC-type polar amino acid transport system, ATPase component, putative SSA_1867 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 125718293 Common pulI Pullulanase, putative SSA_1482 153 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 125717723 Pathogen - Lipoprotein, putative SSA_0880 1 None None None 125717420 Pathogen - hypothetical protein SSA_0560 1 None None None 125718529 Common - hypothetical protein SSA_1730 7 COG4471 COG4471, Uncharacterized protein conserved in bacteria Function unknown 125717392 Common - Conserved uncharacterized protein SSA_0528 3 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 125718037 Common - redox-sensing transcriptional repressor Rex SSA_1216 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 125719007 Common cpsA Transcriptional attenuator LytR, putative SSA_2225 62 COG1316 LytR, Transcriptional regulator Transcription 125717938 Common - hypothetical protein SSA_1110 11 None None None 125717411 Common ansB L-asparaginase, putative SSA_0551 140 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 125717032 Common - hypothetical protein SSA_0154 9 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 125718711 Common - Phosphotransferase system, mannose-specific EIIC, putative SSA_1919 34 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 125718677 Common glyS glycyl-tRNA synthetase subunit beta SSA_1879 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 125718001 Common - Carbamoylphosphate synthase large subunit / biotin carboxylase, putative SSA_1179 13 COG0439 AccC, Biotin carboxylase Lipid metabolism 125717045 Pathogen - Hypothetical protein (Asparagine/proline-rich) SSA_0167 1 COG5373 COG5373, Predicted membrane protein Function unknown 125718673 Common - hypothetical protein SSA_1875 2 None None None 125716925 Common - Amino acid recemase, putative SSA_0042 88 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 125719125 Common - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, putative SSA_2351 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 125717564 Common - hypothetical protein SSA_0711 92 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 125717429 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C SSA_0569 133 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 125717861 Common - hypothetical protein SSA_1029 39 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 125718802 Common - Phosphoglycerate mutase, putative SSA_2015 103 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 125719114 Common - Microcin C7 resistance protein, putative SSA_2339 78 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 125717342 Common cbiM Cobalamin biosynthesis protein CbiM (ABC-type cobalt transporter), putative SSA_0477 62 COG0310 CbiM, ABC-type Co2+ transport system, permease component Inorganic ion transport and metabolism 125719026 Common - hypothetical protein SSA_2247 16 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 125717074 Common folP Dihydropteroate synthase, putative SSA_0197 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 125718344 Common - hypothetical protein SSA_1535 63 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 125718008 Common - Acetyltransferase, CysE/LacA/Lpx A/NodL family, putative SSA_1186 98 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 125718568 Common - Transcriptional regulator, TetR/AcrR family, putative SSA_1768 15 COG1309 AcrR, Transcriptional regulator Transcription 125719012 Common nrdD anaerobic ribonucleoside triphosphate reductase SSA_2230 100 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 125717909 Common - hypothetical protein SSA_1079 10 None None None 125717585 Common - Arsenical resistance operon transcription repressor (ArsR), putative SSA_0734 17 COG0640 ArsR, Predicted transcriptional regulators Transcription 125717748 Common - Fibronectin-binding protein A, putative SSA_0907 83 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 125717297 Common - Cationic amino acid transporter, putative SSA_0430 173 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 125718288 Common - Truncated transposase, putative SSA_1477 1 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 125718339 Common lysS lysyl-tRNA synthetase SSA_1529 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 125717485 Common - Fe-S-cluster redox enzyme/radical SAM enzyme, Cfr family, putative SSA_0628 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 125717892 Common rplU 50S ribosomal protein L21 SSA_1061 199 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 125717121 Common - hypothetical protein SSA_0245 2 None None None 125718370 Common vicX Metal-dependent hydrolase, beta-lactamase superfamily I, putative SSA_1563 60 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 125717060 Common - Glycosyltransferase (vectorial glycosyl polymerization (VGP) family), putative SSA_0181 162 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125718166 Common - hypothetical protein SSA_1350 65 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125718518 Common - Conserved uncharacterized protein SSA_1719 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 125717409 Common alr alanine racemase SSA_0548 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 125717712 Common prfB peptide chain release factor 2 SSA_0869 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 125717087 Common pepA Glutamyl aminopeptidase, putative SSA_0209 85 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 125718766 Pathogen - Conserved uncharacterized protein SSA_1976 1 None None None 125718281 Common aroD 3-dehydroquinate dehydratase SSA_1470 49 COG0710 AroD, 3-dehydroquinate dehydratase Amino acid transport and metabolism 125718933 Common - hypothetical protein SSA_2386 5 COG5547 COG5547, Small integral membrane protein Function unknown 125718649 Common gmk guanylate kinase SSA_1851 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 125718800 Common - hypothetical protein SSA_2013 39 COG1695 COG1695, Predicted transcriptional regulators Transcription 125718971 Common - hypothetical protein SSA_2189 64 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 125716955 Common - ABC transporter substrate-binding protein-sugar transport, putative SSA_0074 105 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 125717888 Common - Aminotransferase, class-V, putative SSA_1057 236 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 125717400 Common - Propanediol utilization:dioldehydratase reactivation, putative SSA_0537 12 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 125718459 Common - Nisin resistance protein, putative SSA_1656 47 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 125719094 Common - Tfp pilus assembly protein, pilus retraction ATPase PilT, putative SSA_2317 217 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 125719055 Pathogen - hypothetical protein SSA_2276 1 None None None 125717369 Common - Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family, putative SSA_0505 28 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 125718869 Common - Carbohydrate kinase, FGGY family, putative SSA_2082 165 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 125718661 Common nadE NAD synthetase SSA_1863 133 COG0171 NadE, NAD synthase Coenzyme metabolism 125717970 Common - hypothetical protein SSA_1145 2 None None None 125716914 Common purL Phosphoribosylformylglycinamidine synthase, putative SSA_0030 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 125717829 Common - cGMP-specific phosphodiesterase, putative SSA_0996 83 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 125718295 Common ligA NAD-dependent DNA ligase LigA SSA_1484 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 125718999 Common - Cps9H, putative SSA_2217 103 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125717308 Common - ABC-type multidrug transport system, ATPase component, putative SSA_0442 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125718235 Common apt adenine phosphoribosyltransferase SSA_1421 182 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 125718683 Common - hypothetical protein SSA_1888 7 None None None 125719085 Common - hypothetical protein SSA_2308 3 None None None 125718841 Common - Thioredoxin, putative SSA_2052 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 125717295 Common hutG Formimidoylglutamase, putative SSA_0428 132 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 125718899 Common purR purine operon repressor SSA_2114 107 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 125717181 Common glnA Glutamine synthetase type 1, putative SSA_0307 228 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 125717447 Common hipO1 Metal-dependent amidase/aminoacylase/carboxypeptidase, putative SSA_0587 170 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 125717283 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SSA_0416 141 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 125717085 Pathogen - hypothetical protein SSA_0207 1 None None None 125718570 Common - hypothetical protein SSA_1770 79 COG1242 COG1242, Predicted Fe-S oxidoreductase General function prediction only 125718715 Common - NADPH-q uinone reductase (modulator of drug activity B), putative SSA_1923 70 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 125716964 Common ntpI V-type ATP synthase subunit I SSA_0085 51 COG1269 NtpI, Archaeal/vacuolar-type H+-ATPase subunit I Energy production and conversion 125717613 Common - hypothetical protein SSA_0765 20 None None None 125717686 Common - Effector of murein hydrolase LrgA/holin-like protein, putative SSA_0842 13 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 125718477 Pathogen - hypothetical protein SSA_1675 1 None None None 125717525 Common - Conserved uncharacterized protein SSA_0670 5 COG4703 COG4703, Uncharacterized protein conserved in bacteria Function unknown 125717807 Pathogen - hypothetical protein SSA_0970 1 None None None 125718491 Common - Transcriptional regulator, XRE family, putative SSA_1691 51 COG3655 COG3655, Predicted transcriptional regulator Transcription 125718659 Common pepC Aminopeptidase C, putative SSA_1861 16 COG3579 PepC, Aminopeptidase C Amino acid transport and metabolism 125718545 Common - hypothetical protein SSA_1746 2 None None None 125718145 Common - Conserved uncharacterized protein SSA_1329 4 None None None 125717150 Common - hypothetical protein SSA_0274 33 COG0551 TopA, Zn-finger domain associated with topoisomerase type I DNA replication, recombination, and repair 125717495 Pathogen - hypothetical protein SSA_0639 1 None None None 125716898 Common - Beta-lactamase class A, putative SSA_0012 16 COG2367 PenP, Beta-lactamase class A Defense mechanisms 125717739 Common - Two component system histidine kinase, putative SSA_0897 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 125718534 Common - UreX, putative SSA_1735 49 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 125717538 Common - Fibril-like structure subunit FibA, putative SSA_0684 10 None None None 125717349 Common - Glutamyl-tRNA reductase, putative SSA_0484 179 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 125717224 Common - Conserved uncharacterized protein SSA_0353 1 None None None 125717396 Common pduB Propanediol utilization protein PduB, putative SSA_0532 17 COG4816 EutL, Ethanolamine utilization protein Amino acid transport and metabolism 125718747 Common - ABC-type Fe-S cluster assembly transporter, permease component, putative SSA_1955 181 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 125717531 Common ispA Farnesyl diphosphate synthase, putative SSA_0676 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 125717119 Common - 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein SSA_0243 130 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 125717294 Common - DNA-binding transcriptional activator, SARP family, putative SSA_0427 50 COG3899 COG3899, Predicted ATPase General function prediction only 125717876 Common thrB homoserine kinase SSA_1044 123 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 125717318 Common - Type II secretory pathway, pullulanase PulA glycosidase, putative SSA_0453 161 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 125717822 Common - Conserved protein, possible transcriptional regulator (sigma-70, region 4), putative SSA_0989 6 None None None 125718035 Common - Conserved uncharacterized Lactobacillales protein SSA_1214 7 None None None 125717098 Common - PTS system, mannose-specific IIB component, putative SSA_0220 15 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 125717070 Common - Adenine-specific DNA methylase, putative SSA_0191 10 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 125717188 Common wcaG Nucleoside-diphosphate-sugar epimerase, putative SSA_0314 182 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 125718936 Common mga M protein trans-acting positive transcriptional regulator (MGA), putative SSA_2151 5 COG3711 BglG, Transcriptional antiterminator Transcription 125719060 Common - Phage infection protein, putative SSA_2282 23 COG1511 COG1511, Predicted membrane protein Function unknown 125717520 Common - NTP pyrophosphohydrolases including oxidative damage repair enzymes (MutT/NUDIX family) SSA_0665 47 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 125718818 Pathogen - Conserved uncharacterized protein SSA_2028 1 None None None 125719112 Pathogen - hypothetical protein SSA_2337 1 COG4709 COG4709, Predicted membrane protein Function unknown 125717704 Common murN hypothetical protein SSA_0861 13 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 125718625 Common glpK glycerol kinase SSA_1826 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 125717361 Common - Succinylglutamate desuccinylase / Aspartoacylase family, putative SSA_0496 46 COG3608 COG3608, Predicted deacylase General function prediction only 125717866 Common - Conserved uncharacterized protein SSA_1034 112 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 125717690 Common dnaE DNA polymerase III DnaE SSA_0846 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 125717603 Common prsA foldase protein PrsA SSA_0753 40 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 125717404 Common - Acetate kinase, putative SSA_0541 162 COG0282 ackA, Acetate kinase Energy production and conversion 125717744 Common - NAD(P)H dehydrogenase (quinone), putative SSA_0903 16 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 125719058 Common - hypothetical protein SSA_2279 2 COG5417 COG5417, Uncharacterized small protein Function unknown 125717951 Common - Oxidoreductase, putative SSA_1124 106 COG2461 COG2461, Uncharacterized conserved protein Function unknown 125718092 Common - hypothetical protein SSA_1274 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 125718974 Pathogen - Conserved uncharacterized protein SSA_2192 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 125719100 Common - hypothetical protein SSA_2324 4 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 125717766 Common - Histone acetyltransferase HPA2, putative SSA_0926 32 COG3153 COG3153, Predicted acetyltransferase General function prediction only 125716905 Common pcsB Secreted antigen GbpB/SagA; peptidoglycan hydrolase; PcsB protein precursor, putative SSA_0019 13 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 125719033 Common ruvA Holliday junction DNA helicase motor protein SSA_2254 209 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 125719063 Common - hypothetical protein SSA_2285 120 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 125718650 Common - hypothetical protein SSA_1852 76 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 125717110 Common - Permease, putative SSA_0233 189 COG0628 PerM, Predicted permease General function prediction only 125717911 Common fruB 1-phosphofructokinase, putative SSA_1081 96 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 125718774 Common - Acetyltransferase, GNAT family, putative SSA_1986 8 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 125716991 Common rpsC 30S ribosomal protein S3 SSA_0113 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 125717591 Common - C4-dicarboxylate anaerobic carrier, possible arginine transporter, putative SSA_0740 38 COG1288 COG1288, Predicted membrane protein Function unknown 125717332 Common cbiD cobalt-precorrin-6A synthase SSA_0467 90 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 125718911 Pathogen - hypothetical protein SSA_2127 1 None None None 125718471 Common - NrdI protein, putative SSA_1668 5 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 125719075 Pathogen - hypothetical protein SSA_2297 1 None None None 125717339 Common - Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase, putative SSA_0474 204 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 125718561 Common - Permease, putative SSA_1762 209 COG0628 PerM, Predicted permease General function prediction only 125717004 Common rpmD 50S ribosomal protein L30 SSA_0125 148 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 125718387 Common fatB Metal-binding ABC transporter (probably hemin), putative SSA_1581 107 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 125718450 Common - hypothetical protein SSA_1646 36 COG4405 COG4405, Uncharacterized protein conserved in bacteria Function unknown 125718617 Common - Very short patch repair endonuclease, putative SSA_1818 71 COG3727 Vsr, DNA G:T-mismatch repair endonuclease DNA replication, recombination, and repair 125717320 Common scrB Sucrose-6-phosphate hydrolase, putative SSA_0455 49 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 125717095 Common - Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative SSA_0217 223 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 125717985 Common - Possible fimbrial assembly protein fimC, putative SSA_1162 7 None None None 125717164 Common - hypothetical protein SSA_0290 13 COG4292 COG4292, Predicted membrane protein Function unknown 125717840 Common - ABC transporter ATP-binding protein-multiple sugar transport, putative SSA_1007 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 125718750 Common mecA adaptor protein SSA_1958 13 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 125717020 Common - Copper chaperone, putative SSA_0141 7 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 125718273 Common pheA prephenate dehydratase SSA_1462 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 125718413 Common mutM formamidopyrimidine-DNA glycosylase SSA_1607 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 125718566 Common - Bacitracin ABC transporter, permease protein, putative SSA_1766 7 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 125717130 Common - hypothetical protein SSA_0254 11 None None None 125718066 Common - hypothetical protein SSA_1246 2 None None None 125716940 Common - Phosphotransferase system sugar-specific EII component, putative SSA_0057 71 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 125718184 Common - FmtA-like protein, putative SSA_1369 107 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125718960 Pathogen - hypothetical protein SSA_2177 1 None None None 125719067 Common cadX Cadmium efflux system transcriptional regulator (ArsR-like), putative SSA_2289 79 COG0640 ArsR, Predicted transcriptional regulators Transcription 125717809 Pathogen - hypothetical protein SSA_0972 1 None None None 125717584 Common - hypothetical protein SSA_0733 8 COG4377 COG4377, Predicted membrane protein Function unknown 125719039 Common mutS DNA mismatch repair protein SSA_2260 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 125718729 Common fabD Malonyl-CoA:ACP transacylase, putative SSA_1937 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 125718119 Common rimM 16S rRNA-processing protein SSA_1303 111 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 125716974 Common thrC threonine synthase SSA_0095 136 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 125717506 Pathogen - hypothetical protein SSA_0651 1 None None None 125717788 Pathogen - hypothetical protein SSA_0949 1 None None None 125718730 Common fabK Enoyl-acyl carrier protein(ACP) reductase, putative SSA_1938 132 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 125718463 Common - ABC-type antimicrobial peptide transport system, ATPase component, putative SSA_1660 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125716888 Common dnaA chromosomal replication initiation protein SSA_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 125717328 Common - cobyrinic acid a,c-diamide synthase SSA_0463 137 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 125718081 Common rpiA ribose-5-phosphate isomerase A SSA_1261 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 125717206 Common - hypothetical protein SSA_0332 134 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125717710 Common - hypothetical protein SSA_0867 12 None None None 125717357 Common - NADH-dependent flavin oxidoreductase, putative SSA_0492 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 125719103 Common fcsR Transcriptional repressor of sugar metabolism, GlpR/DeoR family, putative SSA_2328 105 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 125718890 Common - hypothetical protein SSA_2105 5 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 125717576 Common - hypothetical protein SSA_0725 3 None None None 125718306 Common metK S-adenosylmethionine synthetase SSA_1495 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 125718317 Common rgpFc Lipopolysaccharide biosynthesis protein, putative SSA_1506 14 COG3754 RgpF, Lipopolysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 125718438 Common - FimA fimbrial subunit-like protein, putative SSA_1633 6 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 125718603 Common - NADPH-flavin oxidoreductase, putative SSA_1804 92 COG0778 NfnB, Nitroreductase Energy production and conversion 125718419 Common - Acetyltransferase, GNAT family, putative SSA_1614 116 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 125718181 Common - Alkaline D-stereospecific endopeptidase precursor, putative SSA_1366 53 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 125718062 Common pyrD dihydroorotate dehydrogenase 1B SSA_1242 235 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 125718739 Common - Oligopeptide transport system permease protein, putative SSA_1947 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 125718409 Common - hypothetical protein SSA_1603 2 None None None 125717773 Common - HydD, putative SSA_0934 100 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 125718071 Common - Hydrolase, HD superfamily, putative SSA_1251 28 COG1353 COG1353, Predicted hydrolase of the HD superfamily (permuted catalytic motifs) General function prediction only 125717728 Common - hypothetical protein SSA_0885 4 COG5506 COG5506, Uncharacterized conserved protein Function unknown 125717670 Common dnaG DNA primase SSA_0824 218 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 125718720 Common - Acyl-CoA dehydrogenase, putative SSA_1928 93 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 125718441 Common - ABC-type antibiotic exporter, ATPase component, putative SSA_1636 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 125717373 Common - Propanediol utilization protein, putative SSA_0509 24 COG4917 EutP, Ethanolamine utilization protein Amino acid transport and metabolism 125718783 Common - hypothetical protein SSA_1995 30 COG3382 COG3382, Uncharacterized conserved protein Function unknown 125719071 Common - hypothetical protein SSA_2293 2 None None None 125718474 Pathogen - hypothetical protein SSA_1671 1 None None None 125718215 Common pdxK pyridoxamine kinase SSA_1400 17 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 125717232 Common - Thioredoxin, putative SSA_0362 150 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 125718247 Common - hypothetical protein SSA_1436 91 COG2378 COG2378, Predicted transcriptional regulator Transcription 125717980 Common glyA serine hydroxymethyltransferase SSA_1155 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 125718153 Pathogen - hypothetical protein SSA_1337 1 None None None 125718352 Common - Conserved uncharacterized protein SSA_1544 1 None None None 125718326 Common - hypothetical protein SSA_1515 2 COG2456 COG2456, Uncharacterized conserved protein Function unknown 125718888 Common - Conserved uncharacterized protein SSA_2102 6 None None None 125718131 Pathogen - hypothetical protein SSA_1315 1 None None None 125717204 Common - hypothetical protein SSA_0330 1 COG3247 HdeD, Uncharacterized conserved protein Function unknown 125718393 Common - hypothetical protein SSA_1587 61 COG0622 COG0622, Predicted phosphoesterase General function prediction only 125718642 Common - hypothetical protein SSA_1844 9 COG4758 COG4758, Predicted membrane protein Function unknown 125718914 Pathogen - hypothetical protein SSA_2130 1 None None None 125717444 Pathogen - hypothetical protein SSA_0584 1 None None None 125718319 Common rgpC ABC-type lipopolysaccharide transport system, permease component, putative SSA_1508 124 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 125718148 Pathogen - hypothetical protein SSA_1332 1 None None None 125718557 Pathogen - hypothetical protein SSA_1758 1 None None None 125718605 Common dnaB Replication initiation/membrane attachment protein DnaB, putative SSA_1806 13 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 125718104 Common - hypothetical protein SSA_1286 3 None None None 125718164 Common - hypothetical protein SSA_1348 7 None None None 125718829 Common - Aminoacid specific permease, putative SSA_2039 66 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 125718906 Pathogen - hypothetical protein SSA_2122 1 None None None 125717918 Common - hypothetical protein SSA_1088 30 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 125718777 Common - ABC-type transport system (uncharacterized), ATPase component, putative SSA_1989 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 125718025 Common pgm Phosphoglucomutase SSA_1204 235 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 125718945 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase SSA_2160 171 COG0756 Dut, dUTPase Nucleotide transport and metabolism 125718369 Common - hypothetical protein SSA_1562 13 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 125717850 Common - hypothetical protein SSA_1017 14 None None None 125717926 Common mmuM homocysteine methyltransferase SSA_1096 163 COG2040 MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Amino acid transport and metabolism 125717123 Common - hypothetical protein SSA_0247 3 None None None 125717582 Common - Integral membrane protein, putative SSA_0731 5 None None None 125718342 Common acrA Membrane-fusion protein / periplasmic component of efflux system, putative SSA_1532 73 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 125719080 Common - Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD, putative SSA_2302 121 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 125718016 Common asd aspartate-semialdehyde dehydrogenase SSA_1194 225 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 125718595 Common greA transcription elongation factor GreA SSA_1796 204 COG0782 GreA, Transcription elongation factor Transcription 125718837 Common cysE Serine acetyltransferase, putative SSA_2048 187 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 125717975 Common xylH 4-oxalocrotonate tautomerase SSA_1150 22 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 125716996 Common rplX 50S ribosomal protein L24 SSA_0118 200 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 125718973 Common nifR Conserved uncharacterized protein SSA_2191 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 125717812 Common leuB 3-isopropylmalate dehydrogenase SSA_0977 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 125717627 Common glgP Glycogen phosphorylase, putative SSA_0779 143 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 125718798 Common - ABC-type multidrug transport system, ATPase component, putative SSA_2011 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 125717673 Common - Conserved uncharacterized cytosolic protein, putative SSA_0827 11 None None None 125719099 Common - Transporter, putative SSA_2323 76 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 125717610 Common - Transcriptional regulator, XRE family, putative SSA_0761 73 COG1476 COG1476, Predicted transcriptional regulators Transcription 125718979 Common - hypothetical protein SSA_2197 7 None None None 125718635 Common comFA Superfamily II ATP-dependent DNA/RNA helicase required for DNA uptake (late competence protein), putative SSA_1836 88 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 125717463 Common gidB glucose-inhibited division protein B SSA_0605 191 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 125719152 Common comE Two-component system transcriptional regulator, LytR/AlgR family, putative SSA_2378 21 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 125718284 Common - hypothetical protein SSA_1473 5 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 125718900 Common cbf Cmp-binding-factor 1, putative SSA_2116 47 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 125717059 Pathogen - hypothetical protein SSA_0180 1 None None None 125719028 Common - ABC-type antimicrobial peptide transporter, ATPase component, putative SSA_2249 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 125717141 Common - ORFA, transposon ISSsa1 SSA_0265 6 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 125717958 Common - High-affinity Fe 2+/Pb2+ permease, putative SSA_1131 56 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 125719131 Common rplI 50S ribosomal protein L9 SSA_2357 211 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 125717709 Common pacL Cation-transporting ATPase, E1-E 2 family, putative SSA_0866 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 125717248 Common - PTS system, beta-glucoside-specific EII component, putative SSA_0379 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 125717508 Common murG N-acetylglucosaminyl transferase SSA_0653 205 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 125718177 Common - ORFB, transposon ISSsa2 SSA_1362 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 125718045 Common - hypothetical protein SSA_1224 2 None None None 125718951 Common - ABC-type multidrug transporter, ATPase and permease components, putative SSA_2167 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 125716927 Pathogen - hypothetical protein SSA_0044 2 None None None 125718199 Common - hypothetical protein SSA_1384 6 COG5353 COG5353, Uncharacterized protein conserved in bacteria Function unknown 125718267 Pathogen - hypothetical protein SSA_1456 1 None None None 125717493 Common trpB tryptophan synthase subunit beta SSA_0637 227 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 125718804 Common - Hypothetical protein (possibly membrane-associated) SSA_2017 2 None None None 125717375 Common pduX Propanediol utilization kinase, putative SSA_0511 19 COG4542 PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase Secondary metabolites biosynthesis, transport, and catabolism 125719137 Common - Phosphoglycolate phosphatase, putative SSA_2363 187 COG0546 Gph, Predicted phosphatases General function prediction only 125717281 Common - hypothetical protein SSA_0414 2 None None None 125718372 Common - Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative SSA_1565 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 125717072 Common - CAAX amino terminal protease family protein, putative SSA_0193 18 None None None 125717347 Common - ATP:cobalamin adenosyl transferase, putative SSA_0482 129 COG2096 COG2096, Uncharacterized conserved protein Function unknown 125717702 Common tpiA triosephosphate isomerase SSA_0859 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 125718700 Common - hypothetical protein SSA_1907 1 None None None 125718498 Common lacB galactose-6-phosphate isomerase subunit LacB SSA_1698 129 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 125717894 Common - Peptidoglycan-binding domain-containing protein, putative SSA_1063 9 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 125717016 Common adcB ABC transporter (permease), Zn porter, putative SSA_0137 192 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 125717785 Common phoU Phosphate transport system regulatory protein, putative SSA_0946 195 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 125716934 Common - Dihydroxyacetone kinase phosphotransfer protein, putative SSA_0051 33 COG3412 COG3412, Uncharacterized protein conserved in bacteria Function unknown 125718694 Common - hypothetical protein SSA_1901 141 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 125718356 Common - NTP pyrophosphohydrolases including oxidative damage repair enzymes, putative SSA_1548 21 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 125716953 Common - ABC sugar transporter, MsmK-like protein, putative SSA_0072 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 125717416 Pathogen - hypothetical protein SSA_0556 2 None None None 125717407 Common aro phospho-2-dehydro-3-heoxyheptonate aldolase SSA_0546 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 125717218 Common - hypothetical protein SSA_0346 29 None None None 125717839 Common gtfA Dextransucrase, putative SSA_1006 86 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 125718768 Common asp Alkaline-shock protein, putative SSA_1979 37 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 125718848 Common - Arabinose efflux permease, putative SSA_2060 102 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 125718349 Common - Peptidase, U32 family, putative SSA_1541 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 125717305 Common ssb single-strand DNA-binding protein SSA_0438 214 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 125717025 Common - DNA repair ATPase, putative SSA_0146 3 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 125717272 Common - Transcriptional regulator, XRE family, putative SSA_0405 23 COG1396 HipB, Predicted transcriptional regulators Transcription 125718623 Common - hypothetical protein SSA_1824 6 None None None 125717138 Common ssaA ABC-type Mn/Zn transporter, ATP-ase component, putative SSA_0262 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 125718332 Common ppc phosphoenolpyruvate carboxylase SSA_1521 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 125717450 Common - hypothetical protein SSA_0590 2 None None None 125718867 Common - Acetyltransferase, putative SSA_2079 201 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 125717434 Common - YdjX protein, putative SSA_0574 45 COG0398 COG0398, Uncharacterized conserved protein Function unknown 125717819 Common - Choline transporter, putative SSA_0986 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 125718109 Pathogen - hypothetical protein SSA_1292 1 None None None 125718520 Common holB DNA polymerase III subunit delta' SSA_1721 212 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 125718851 Common pepS Aminopeptidase PepS, putative SSA_2063 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 125717664 Common - Copper transport operon or penicillinase transcription repressor, putative SSA_0816 21 COG3682 COG3682, Predicted transcriptional regulator Transcription 125718237 Common recJ Single-stranded DNA-specific exonuclease, 5'-3', putative SSA_1423 194 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 125718986 Pathogen - hypothetical protein SSA_2204 1 None None None 125717261 Common - hypothetical protein SSA_0392 5 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 125718723 Common accD acetyl-CoA carboxylase subunit beta SSA_1931 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 125718231 Common - SAM-dependent methyltransferase, putative SSA_1417 32 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 125718699 Common hit Diadenosine tetraphosphate (Ap4A) hydrolase (histidine triad protein, cell-cycle regulation), putative SSA_1906 236 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 125719009 Common - Acetyl transferase, putative SSA_2227 29 COG3981 COG3981, Predicted acetyltransferase General function prediction only 125717857 Common amy cytoplasmic alpha-amylase SSA_1024 75 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 125719000 Common - Glycosyltransferase (cell wall biogenesis) Cps9G, putative SSA_2218 100 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 125719123 Common galE1 DTDP-4-dehydrorhamnose 3,5-epimerase, putative SSA_2349 237 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 125717830 Common dnaX DNA polymerase III subunits gamma and tau SSA_0997 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 125717475 Common - Membrane protease subunits, stomatin/prohibitin-like protein (SPFH domain/band 7 family), putative SSA_0617 40 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 125718663 Common - Thioredoxin reductase, putative SSA_1865 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 125717257 Common - Mismatch repair ATPase (MutS family), putative SSA_0388 193 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 125717719 Common thiJ 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative SSA_0876 148 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 125718820 Pathogen - hypothetical protein SSA_2030 1 None None None 125717052 Common tyrS tyrosyl-tRNA synthetase SSA_0174 217 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 125718507 Common - Conserved uncharacterized protein SSA_1707 12 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 125718877 Common sga putative L-xylulose 5-phosphate 3-epimerase SSA_2089 34 COG3623 SgaU, Putative L-xylulose-5-phosphate 3-epimerase Carbohydrate transport and metabolism 125717634 Common uncA Proton-translocating ATPase, F1 sector, alpha subunit, putative SSA_0786 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 125718559 Pathogen - hypothetical protein SSA_1760 1 None None None 125717047 Pathogen - hypothetical protein SSA_0169 1 None None None 125718923 Common - Membrane protein (preprotein translocase) oxaA 1 precursor, putative SSA_2139 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 125719128 Common - hypothetical protein SSA_2354 55 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only