Bartonella bacilliformis KC583, complete genome NC_008783 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 121602654 Common argH argininosuccinate lyase BARBAKC583_0054 235 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 121602487 Common - peptidase, M24 family BARBAKC583_0936 202 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 121602037 Common - outer membrane protein, omp25/ropB family BARBAKC583_1213 14 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 121601691 Common pyrF orotidine 5'-phosphate decarboxylase BARBAKC583_1044 172 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 121602376 Pathogen - hypothetical protein BARBAKC583_0214 1 None None None 121602746 Common - hypothetical protein BARBAKC583_0930 40 COG3814 COG3814, Uncharacterized protein conserved in bacteria Function unknown 121602544 Common flgL flagellar hook-associated protein FlgL BARBAKC583_1120 18 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 121602305 Common - sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase BARBAKC583_0410 177 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 121602055 Common - hypothetical protein BARBAKC583_0679 18 COG4782 COG4782, Uncharacterized protein conserved in bacteria Function unknown 121602800 Common flgD flagellar hook capping protein BARBAKC583_1117 94 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 121602443 Common - oxidoreductase, short chain dehydrogenase/reductase family BARBAKC583_0485 232 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 121601945 Common ruvA Holliday junction DNA helicase motor protein BARBAKC583_0150 209 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 121602479 Common cyoC cytochrome o ubiquinol oxidase, subunit III BARBAKC583_1273 158 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 121602384 Common dapE succinyl-diaminopimelate desuccinylase BARBAKC583_1338 206 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 121601842 Common aroB 3-dehydroquinate synthase BARBAKC583_0037 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 121601725 Common - auxiliary transport protein, membrane fusion protein (MFP) family BARBAKC583_0117 151 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 121602489 Common ffh signal recognition particle protein BARBAKC583_0068 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 121602316 Common - Sua5/YciO/YrdC family protein BARBAKC583_0389 235 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 121601758 Pathogen - putative flagellar motor protein BARBAKC583_1125 3 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 121602788 Common hslU ATP-dependent protease ATP-binding subunit BARBAKC583_1260 211 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 121602806 Common fpr ferredoxin---NADP reductase BARBAKC583_1092 91 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 121601780 Common - staphylococcal nuclease homolog BARBAKC583_0848 39 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 121602809 Pathogen - hypothetical protein BARBAKC583_0162 1 None None None 121601767 Common priA primosome assembly protein PriA BARBAKC583_0108 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 121601805 Common gyrB DNA gyrase subunit B BARBAKC583_1346 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 121602342 Common purM phosphoribosylaminoimidazole synthetase BARBAKC583_0765 230 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 121602401 Common - hypothetical protein BARBAKC583_0226 2 None None None 121601982 Pathogen - hypothetical protein BARBAKC583_0845 1 None None None 121602514 Common rplE1 ribosomal protein L5 BARBAKC583_0678 242 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 121601751 Pathogen - hypothetical protein BARBAKC583_0774 3 None None None 121602861 Common - DNA repair protein, RadC family BARBAKC583_0830 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 121602173 Common def peptide deformylase BARBAKC583_1319 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 121601868 Common - hypothetical protein BARBAKC583_0653 3 COG3827 COG3827, Uncharacterized protein conserved in bacteria Function unknown 121602853 Common - hypothetical protein BARBAKC583_0236 2 None None None 121601678 Common - putative protein-L-isoaspartate O-methyltransferase BARBAKC583_0651 156 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 121601651 Common - phosphoserine aminotransferase BARBAKC583_0271 73 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 121601718 Common rnd ribonuclease D BARBAKC583_0869 122 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 121602736 Common dnaE DNA polymerase III subunit alpha BARBAKC583_0872 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 121601711 Pathogen - hypothetical protein BARBAKC583_0193 1 None None None 121601653 Pathogen - hypothetical protein BARBAKC583_0189 1 None None None 121602480 Common purD phosphoribosylamine--glycine ligase BARBAKC583_0392 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 121602639 Common rpsQ 30S ribosomal protein S17 BARBAKC583_0675 224 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 121601971 Common rplE 50S ribosomal protein L5 BARBAKC583_0710 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 121602166 Common gltX2 glutamyl-tRNA synthetase BARBAKC583_0607 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 121602775 Pathogen - hypothetical protein BARBAKC583_1181 1 None None None 121602523 Common rpsC 30S ribosomal protein S3 BARBAKC583_0672 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 121602905 Pathogen - hypothetical protein BARBAKC583_0905 1 None None None 121602902 Pathogen phaG putative monovalent cation/H+ antiporter subunit G BARBAKC583_0035 1 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 121602245 Common cyoD cytochrome o ubiquinol oxidase, subunit IV BARBAKC583_1272 53 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 121601661 Common - isochorismatase family protein BARBAKC583_0960 114 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 121602081 Common mraW S-adenosyl-methyltransferase MraW BARBAKC583_0955 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 121601904 Common - M23 peptidase domain protein BARBAKC583_0256 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 121602770 Common nrdF ribonucleotide-diphosphate reductase subunit beta BARBAKC583_0358 150 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 121602104 Common pyrG CTP synthetase BARBAKC583_0530 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 121602870 Pathogen - hypothetical protein BARBAKC583_1080 1 None None None 121602703 Common argG argininosuccinate synthase BARBAKC583_1361 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 121601846 Pathogen - hypothetical protein BARBAKC583_0890 3 None None None 121602461 Pathogen - hypothetical protein BARBAKC583_1075 1 None None None 121602026 Pathogen - hypothetical protein BARBAKC583_1130 1 None None None 121602613 Common nuoN NADH dehydrogenase subunit N BARBAKC583_0791 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 121601823 Common - comF family protein BARBAKC583_0367 73 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 121602097 Pathogen - hypothetical protein BARBAKC583_1055 3 None None None 121602351 Common - fxsA cytoplasmic membrane protein BARBAKC583_1295 59 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 121601683 Common - hypothetical protein BARBAKC583_1059 15 COG1598 COG1598, Uncharacterized conserved protein Function unknown 121602459 Common recF recombination protein F BARBAKC583_1277 165 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 121601774 Common - hypothetical protein BARBAKC583_1100 4 COG2835 COG2835, Uncharacterized conserved protein Function unknown 121601942 Common - hypothetical protein BARBAKC583_0248 5 None None None 121601872 Common - FtsK/SpoIIIE family protein BARBAKC583_0093 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 121602916 Common - hypothetical protein BARBAKC583_1045 231 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 121602454 Common alr alanine racemase BARBAKC583_1093 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 121602830 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase BARBAKC583_1303 232 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 121602701 Common ftsY signal recognition particle-docking protein FtsY BARBAKC583_0017 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 121602467 Common rpmI 50S ribosomal protein L35 BARBAKC583_1315 88 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 121602844 Common recA recombinase A BARBAKC583_0727 228 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 121601875 Pathogen - hypothetical protein BARBAKC583_1079 1 None None None 121602602 Common glpX fructose 1,6-bisphosphatase II BARBAKC583_0746 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 121602367 Common - invasion associated locus B family protein BARBAKC583_0312 4 None None None 121602073 Common - phage lysozyme BARBAKC583_0240 47 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 121601921 Common rpsG1 30S ribosomal protein S7 BARBAKC583_0662 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 121602573 Common - hypothetical protein BARBAKC583_1266 44 COG3807 COG3807, Uncharacterized protein conserved in bacteria Function unknown 121602630 Common afeC iron chelate ABC transporter, permease protein AfeC BARBAKC583_1309 188 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 121602626 Common - hypothetical protein BARBAKC583_1322 108 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 121602267 Common - CysZ-like protein BARBAKC583_1350 24 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 121602611 Common - electron transfer flavoprotein-ubiquinone dehydrogenase BARBAKC583_1039 110 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 121601735 Common recJ single-stranded-DNA-specific exonuclease RecJ BARBAKC583_0900 193 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 121602216 Common pyrE orotate phosphoribosyltransferase BARBAKC583_0469 66 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 121602354 Common infB translation initiation factor IF-2 BARBAKC583_1254 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 121602254 Pathogen - hypothetical protein BARBAKC583_0451 1 None None None 121602278 Common lepA GTP-binding protein LepA BARBAKC583_1324 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 121602157 Common - ATP-dependent protease BARBAKC583_1097 80 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 121602650 Common tig trigger factor BARBAKC583_0553 217 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 121601717 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 BARBAKC583_0536 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 121602332 Common - 3'-5' exonuclease domain protein BARBAKC583_1219 107 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 121601895 Common - dipeptide ABC transporter, permease protein BARBAKC583_1028 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 121602429 Pathogen - hypothetical protein BARBAKC583_0454 1 None None None 121601704 Pathogen - hypothetical protein BARBAKC583_0176 1 None None None 121602118 Pathogen - hypothetical protein BARBAKC583_0463 1 None None None 121602303 Common - putative methyltransferase BARBAKC583_1209 211 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 121602308 Common ialB invasion protein B BARBAKC583_0326 9 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 121602154 Common nrdR hypothetical protein BARBAKC583_0630 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 121601745 Common - RNA pseudouridine synthase BARBAKC583_1210 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 121602186 Common - transporter, major facilitator family BARBAKC583_0895 8 None None None 121602641 Common - invasion associated locus B family protein BARBAKC583_0404 14 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 121602894 Common flbT flagellar biosynthesis repressor FlbT BARBAKC583_1118 17 COG5443 FlbT, Flagellar biosynthesis regulator FlbT Cell motility and secretion 121601677 Common hmuV hemin ABC transporter, ATP-binding protein BARBAKC583_0455 249 COG4559 COG4559, ABC-type hemin transport system, ATPase component Inorganic ion transport and metabolism 121602661 Common - hypothetical protein BARBAKC583_0995 93 COG1565 COG1565, Uncharacterized conserved protein Function unknown 121602625 Common mfd transcription-repair coupling factor BARBAKC583_0798 212 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 121602345 Common flgG flagellar basal body rod protein FlgG BARBAKC583_1141 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 121601967 Common - radical SAM enzyme, Cfr family BARBAKC583_1362 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 121601680 Pathogen - hypothetical protein BARBAKC583_0557 1 None None None 121602812 Common - putative exonuclease BARBAKC583_0196 15 None None None 121601642 Common - creatininase BARBAKC583_1108 71 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 121602420 Pathogen - hypothetical protein BARBAKC583_0194 1 None None None 121602538 Common gltK1 glutamate/aspartate ABC transporter, permease protein GltK BARBAKC583_0656 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 121601984 Common - ATPase, AFG1 family BARBAKC583_0021 99 COG1485 COG1485, Predicted ATPase General function prediction only 121602386 Pathogen - hypothetical protein BARBAKC583_0210 1 None None None 121602717 Common - tetratricopeptide repeat protein BARBAKC583_0204 38 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 121602511 Common tyrS tyrosyl-tRNA synthetase BARBAKC583_0806 217 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602439 Common rpsS 30S ribosomal protein S19 BARBAKC583_0702 242 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 121602103 Common mutS DNA mismatch repair protein BARBAKC583_1299 201 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 121602562 Common rplK 50S ribosomal protein L11 BARBAKC583_0567 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 121602588 Common - ABC transporter, ATP-binding protein BARBAKC583_0352 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 121601950 Common - hypothetical protein BARBAKC583_0833 74 COG1430 COG1430, Uncharacterized conserved protein Function unknown 121602581 Common fur ferric uptake regulation protein BARBAKC583_0360 188 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 121602535 Common ligA NAD-dependent DNA ligase LigA BARBAKC583_0937 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 121602764 Common bioY biotin transport protein BioY BARBAKC583_1193 31 COG1268 BioY, Uncharacterized conserved protein General function prediction only 121602208 Common - putative microcin immunity protein BARBAKC583_0757 130 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 121602686 Common - hypothetical protein BARBAKC583_0098 30 COG1434 COG1434, Uncharacterized conserved protein Function unknown 121601932 Common atpG F0F1 ATP synthase subunit gamma BARBAKC583_0113 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 121602289 Common - conserved hypothetical protein TIGR02302 BARBAKC583_0057 28 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 121602298 Common - hypothetical protein BARBAKC583_0870 14 COG4391 COG4391, Uncharacterized protein conserved in bacteria Function unknown 121602556 Common - hypothetical protein BARBAKC583_0366 71 None None None 121602799 Common - hypothetical protein BARBAKC583_0408 36 COG4233 COG4233, Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis Posttranslational modification, protein turnover, chaperones / Energy production and conversion 121601867 Common - transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family BARBAKC583_0365 158 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 121602462 Common murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BARBAKC583_0951 212 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 121601826 Common - putative cytochrome c-type biogenesis protein CycH BARBAKC583_0430 19 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 121601976 Pathogen - hypothetical protein BARBAKC583_0224 1 None None None 121602579 Pathogen - hypothetical protein BARBAKC583_0613 1 None None None 121602201 Common nuoK NADH dehydrogenase (quinone), K subunit BARBAKC583_0788 78 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 121601768 Common mviN integral membrane protein MviN BARBAKC583_1166 190 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 121601995 Pathogen ccmD heme exporter protein CcmD BARBAKC583_1287 1 None None None 121601854 Pathogen - hypothetical protein BARBAKC583_1065 1 None None None 121602819 Common - hypothetical protein BARBAKC583_0526 48 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 121602019 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase BARBAKC583_0119 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 121602397 Pathogen - hypothetical protein BARBAKC583_0132 1 None None None 121602112 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase BARBAKC583_0477 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 121602217 Common gltJ2 glutamate/aspartate ABC transporter, permease protein GltJ BARBAKC583_0690 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 121601912 Common - hypothetical protein BARBAKC583_0192 2 None None None 121601690 Common - iron chelate ABC transporter, ATP-binding protein BARBAKC583_1114 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 121602375 Common hupB DNA-binding protein HU-beta BARBAKC583_0550 212 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 121602576 Common pheT phenylalanyl-tRNA synthetase subunit beta BARBAKC583_1312 233 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 121602078 Common dnaA chromosomal replication initiation protein BARBAKC583_1279 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 121601929 Common xseA exodeoxyribonuclease VII large subunit BARBAKC583_1034 204 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 121602662 Common - hypothetical protein BARBAKC583_0970 15 COG2261 COG2261, Predicted membrane protein Function unknown 121602668 Common rplC 50S ribosomal protein L3 BARBAKC583_0666 218 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 121602408 Common aroP aromatic amino acid transport protein AroP BARBAKC583_1196 138 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 121601818 Common tolB translocation protein TolB BARBAKC583_0144 143 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 121601757 Common prmA ribosomal protein L11 methyltransferase BARBAKC583_0935 178 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 121601841 Common - putative permease, YjgP/YjgQ family BARBAKC583_0507 65 COG0795 COG0795, Predicted permeases General function prediction only 121601785 Common kgd alpha-ketoglutarate decarboxylase BARBAKC583_0025 148 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 121602737 Common secA preprotein translocase subunit SecA BARBAKC583_0361 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 121602222 Common cycA D-serine/D-alanine/glycine transporter BARBAKC583_0916 177 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 121602503 Common valS valyl-tRNA synthetase BARBAKC583_0687 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602852 Common - dihydroorotase BARBAKC583_0840 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 121601981 Common - antioxidant, AhpC/TSA family BARBAKC583_0053 141 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 121602860 Common - hypothetical protein BARBAKC583_0416 20 COG5389 COG5389, Uncharacterized protein conserved in bacteria Function unknown 121602455 Common - sensor histidine kinase BARBAKC583_0255 73 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 121602232 Common - AsmA family BARBAKC583_0298 14 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 121602336 Common ndk nucleoside diphosphate kinase BARBAKC583_0514 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 121601650 Common - hypothetical protein BARBAKC583_1147 18 None None None 121602735 Common gltI1 glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein BARBAKC583_0659 129 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 121602720 Common - conserved hypothetical protein TIGR00250 BARBAKC583_0838 161 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 121601845 Common - BolA family protein BARBAKC583_0864 78 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 121601652 Common - putative flagellar basal-body rod protein FlgF BARBAKC583_1146 125 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 121602473 Pathogen - hypothetical protein BARBAKC583_0415 1 None None None 121601752 Common - putative addiction module antidote protein BARBAKC583_0276 27 COG3636 COG3636, Predicted transcriptional regulator Transcription 121601649 Common rplQ 50S ribosomal protein L17 BARBAKC583_0723 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 121602352 Common - glutathione S-transferase BARBAKC583_1050 88 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 121601979 Common metN D-methionine ABC transporter, ATP-binding protein BARBAKC583_1103 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 121601824 Common grp glutamate uptake regulatory protein Grp BARBAKC583_0850 148 COG1522 Lrp, Transcriptional regulators Transcription 121601659 Common sdhB succinate dehydrogenase iron-sulfur subunit BARBAKC583_0091 193 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 121602822 Common murG N-acetylglucosaminyl transferase BARBAKC583_0947 207 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 121602513 Common - putative permease, YjgP/YjgQ family BARBAKC583_0508 76 COG0795 COG0795, Predicted permeases General function prediction only 121602266 Pathogen - hypothetical protein BARBAKC583_0175 1 None None None 121602553 Common fliR flagellar biosynthesis protein FliR BARBAKC583_1159 124 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 121601970 Common lpxA UDP-N-acetylglucosamine acyltransferase BARBAKC583_0592 177 COG1043 LpxA, Acyl- acyl carrier protein 121601888 Common - nitroreductase family protein BARBAKC583_0573 91 COG0778 NfnB, Nitroreductase Energy production and conversion 121602448 Common ctpA C-terminal processing peptidase BARBAKC583_0324 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 121602038 Common nuoG NADH dehydrogenase subunit G BARBAKC583_0784 192 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 121601850 Common gcvT glycine cleavage system T protein BARBAKC583_1096 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 121602745 Common fliF flagellar MS-ring protein BARBAKC583_1129 129 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 121602464 Common - F0F1 ATP synthase subunit C BARBAKC583_0377 26 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 121601693 Common thiN thiamine pyrophosphokinase BARBAKC583_0128 35 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 121602597 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit BARBAKC583_0762 186 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 121602486 Common feuQ sensor histidine kinase FeuQ BARBAKC583_0429 175 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 121601667 Common tpiA triosephosphate isomerase BARBAKC583_0528 217 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 121602125 Common - transcriptional regulator, CarD family BARBAKC583_0123 83 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 121602319 Common fumC fumarate hydratase BARBAKC583_1174 225 COG0114 FumC, Fumarase Energy production and conversion 121601802 Common - hypothetical protein BARBAKC583_1064 11 None None None 121602584 Common rpoH2 RNA polymerase factor sigma-32 BARBAKC583_0126 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 121602690 Common ksgA dimethyladenosine transferase BARBAKC583_0503 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 121601736 Common rnhB ribonuclease HII BARBAKC583_0388 209 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 121602415 Common - conserved hypothetical protein TIGR00251 BARBAKC583_0328 60 COG1872 COG1872, Uncharacterized conserved protein Function unknown 121602723 Common - hypothetical protein BARBAKC583_0582 19 None None None 121602108 Common mutY A/G-specific adenine glycosylase BARBAKC583_0414 222 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 121601670 Common flhA flagellar biosynthesis protein A BARBAKC583_1160 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 121602896 Common - hypothetical protein BARBAKC583_1098 91 COG2835 COG2835, Uncharacterized conserved protein Function unknown 121602199 Common uvrB excinuclease ABC subunit B BARBAKC583_0986 224 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 121602054 Pathogen - hypothetical protein BARBAKC583_1063 1 None None None 121602797 Common - TldD/PmbA family protein BARBAKC583_0403 169 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 121602259 Common nrdI ribonucleotide reductase stimulatory protein BARBAKC583_0355 39 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 121602871 Common - hypothetical protein BARBAKC583_1343 78 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 121602697 Common - Mg chelatase homolog BARBAKC583_1345 192 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 121602478 Common sufC FeS assembly ATPase SufC BARBAKC583_0811 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 121602829 Pathogen - hypothetical protein BARBAKC583_0541 1 None None None 121602383 Pathogen - hypothetical protein BARBAKC583_1216 1 None None None 121602807 Common nusG transcription antitermination protein NusG BARBAKC583_0566 215 COG0250 NusG, Transcription antiterminator Transcription 121601724 Pathogen - hypothetical protein BARBAKC583_0974 1 None None None 121601910 Common - hypothetical protein BARBAKC583_0134 18 COG5480 COG5480, Predicted integral membrane protein Function unknown 121602614 Common pcm protein-L-isoaspartate O-methyltransferase BARBAKC583_0520 149 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 121602261 Common - ATP12 chaperone family protein BARBAKC583_0731 33 COG5387 COG5387, Chaperone required for the assembly of the mitochondrial F1-ATPase Posttranslational modification, protein turnover, chaperones 121601679 Common - putative potassium uptake protein BARBAKC583_0982 127 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 121602677 Common pgi glucose-6-phosphate isomerase BARBAKC583_0307 200 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 121602612 Common - iron chelate ABC transporter, permease protein BARBAKC583_1113 36 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 121602910 Common rpsM 30S ribosomal protein S13 BARBAKC583_0720 237 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 121602359 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA BARBAKC583_0011 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 121602162 Common - D-alanyl-D-alanine carboxypeptidase family protein BARBAKC583_0042 157 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 121602488 Common argB acetylglutamate kinase BARBAKC583_1326 220 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 121601893 Common - conserved hypothetical protein TIGR00282 BARBAKC583_0202 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 121602631 Common glyS glycyl-tRNA synthetase subunit beta BARBAKC583_0380 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 121602507 Common - putative penicillin binding protein BARBAKC583_0953 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 121601966 Common dapB dihydrodipicolinate reductase BARBAKC583_1051 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 121601953 Common - hypothetical protein BARBAKC583_1017 27 None None None 121602716 Common secDF bifunctional preprotein translocase subunit SecD/SecF BARBAKC583_0878 216 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 121602165 Common ftsE cell division ATP-binding protein FtsE BARBAKC583_0100 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 121602021 Common sdhA succinate dehydrogenase flavoprotein subunit BARBAKC583_0090 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 121602182 Pathogen - hypothetical protein BARBAKC583_1190 3 None None None 121602814 Common nusA transcription elongation factor NusA BARBAKC583_1252 220 COG0195 NusA, Transcription elongation factor Transcription 121601820 Common rpsS 30S ribosomal protein S19 BARBAKC583_0670 242 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 121602279 Common - hypothetical protein BARBAKC583_1364 28 None None None 121602782 Common - metallo-beta-lactamase family protein BARBAKC583_0988 213 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 121602601 Common - hypothetical protein BARBAKC583_0188 12 None None None 121601920 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase BARBAKC583_0949 208 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 121602310 Common - putative lipoprotein BARBAKC583_1317 38 COG4764 COG4764, Uncharacterized protein conserved in bacteria Function unknown 121602776 Common - sigma-54 dependent DNA-binding response regulator BARBAKC583_0337 181 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 121602524 Common glyA serine hydroxymethyltransferase BARBAKC583_0629 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 121602541 Common rimM 16S rRNA processing protein RimM BARBAKC583_0085 172 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 121602655 Common clpP ATP-dependent Clp protease proteolytic subunit BARBAKC583_0546 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 121601905 Common - hypothetical protein BARBAKC583_0060 94 COG2947 COG2947, Uncharacterized conserved protein Function unknown 121602253 Common infA translation initiation factor IF-1 BARBAKC583_0211 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 121602099 Pathogen - hypothetical protein BARBAKC583_0386 1 None None None 121602139 Pathogen - hypothetical protein BARBAKC583_0215 1 None None None 121602801 Pathogen - hypothetical protein BARBAKC583_0957 1 None None None 121602315 Common rpsL 30S ribosomal protein S12 BARBAKC583_0661 238 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 121601660 Common - oxidoreductase, zinc-binding dehydrogenase family BARBAKC583_0618 201 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 121602899 Common - TonB-dependent heme/hemoglobin receptor family protein BARBAKC583_0460 86 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 121602903 Common recG ATP-dependent DNA helicase RecG BARBAKC583_0756 225 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 121602246 Common - hypothetical protein BARBAKC583_1068 2 None None None 121602878 Common - amino acid ABC transporter, ATP-binding protein BARBAKC583_0595 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 121601944 Common dnaN DNA polymerase III subunit beta BARBAKC583_1278 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 121602096 Common - hypothetical protein BARBAKC583_1110 7 None None None 121602831 Common rpoB DNA-directed RNA polymerase subunit beta BARBAKC583_0571 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 121602702 Common fdxA ferredoxin BARBAKC583_0124 155 COG1146 COG1146, Ferredoxin Energy production and conversion 121602214 Pathogen - hypothetical protein BARBAKC583_0170 1 None None None 121602341 Common - aspartate kinase BARBAKC583_0370 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 121601871 Common - putative NADH dehydrogenase (quinone) subunit BARBAKC583_0769 36 None None None 121602704 Common - N-terminal double-transmembrane domain protein BARBAKC583_1009 31 None None None 121602323 Common phaD putative monovalent cation/H+ antiporter subunit D BARBAKC583_0032 201 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 121601943 Common - 3-oxoacyl-(acyl-carrier-protein) synthase domain protein BARBAKC583_0620 13 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 121602787 Common rplS 50S ribosomal protein L19 BARBAKC583_0087 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 121601682 Common - heat shock protein HtpX BARBAKC583_0071 194 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 121602149 Common - outer membrane protein, omp25/ropB family BARBAKC583_1215 12 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 121601643 Common metG methionyl-tRNA synthetase BARBAKC583_0820 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602360 Common - transcriptional regulatory protein, ros/MucR family BARBAKC583_0423 34 COG4957 COG4957, Predicted transcriptional regulator Transcription 121602718 Common - tetrapyrrole methylase family protein BARBAKC583_1043 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 121602587 Common gyrA DNA gyrase subunit A BARBAKC583_0737 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 121602281 Common pgk phosphoglycerate kinase BARBAKC583_0140 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 121602583 Pathogen - hypothetical protein BARBAKC583_1367 1 None None None 121602288 Common - type I secretion outer membrane protein, TolC family BARBAKC583_0685 124 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121602181 Common - hypothetical protein BARBAKC583_0841 170 COG0344 COG0344, Predicted membrane protein Function unknown 121602020 Pathogen - hypothetical protein BARBAKC583_0873 3 None None None 121602516 Common - ABC transporter, permease/ATP-binding protein BARBAKC583_1342 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 121602537 Pathogen - hypothetical protein BARBAKC583_1014 1 None None None 121602685 Common accD acetyl-CoA carboxylase subunit beta BARBAKC583_1351 219 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 121602324 Common rpsT 30S ribosomal protein S20 BARBAKC583_1281 185 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 121602493 Common - transglycosylase, SLT domain protein BARBAKC583_1124 43 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 121601896 Common nadD nicotinic acid mononucleotide adenyltransferase BARBAKC583_0320 142 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 121601804 Pathogen - hypothetical protein BARBAKC583_0241 1 None None None 121601933 Common fliE flagellar hook-basal body complex protein FliE BARBAKC583_1142 15 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 121602885 Common - recombination factor protein RarA BARBAKC583_0726 215 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 121602911 Common - PAP2 superfamily protein BARBAKC583_0495 45 None None None 121602428 Pathogen - hypothetical protein BARBAKC583_0191 1 None None None 121602299 Common - hypothetical protein BARBAKC583_0064 28 COG3898 COG3898, Uncharacterized membrane-bound protein Function unknown 121602895 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase BARBAKC583_1191 211 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 121602730 Common - hypothetical protein BARBAKC583_1157 11 COG3951 COG3951, Rod binding protein Cell envelope biogenesis, outer membrane / Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 121602333 Common - uracil DNA glycosylase family protein BARBAKC583_0466 59 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 121602215 Common - transcriptional regulator, LysR family BARBAKC583_0980 185 COG0583 LysR, Transcriptional regulator Transcription 121602158 Common rpoZ DNA-directed RNA polymerase subunit omega BARBAKC583_0467 115 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 121601783 Common - putative HTH-type transcriptional regulator ygjM BARBAKC583_0265 37 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 121602423 Common rpmG 50S ribosomal protein L33 BARBAKC583_0847 125 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 121602119 Common hmuS hemin transport protein HmuS BARBAKC583_0458 40 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 121602549 Pathogen - hypothetical protein BARBAKC583_0407 1 None None None 121602079 Common - N-acetylmuramoyl-L-alanine amidase family protein BARBAKC583_0453 103 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 121602185 Common fusA2 elongation factor G BARBAKC583_0695 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 121602709 Common metI D-methionine ABC transporter, permease protein BARBAKC583_1104 139 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 121602440 Common - acyl-CoA dehydrogenase family protein BARBAKC583_0837 67 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 121602304 Common - outer membrane protein, SmpA/OmlA family BARBAKC583_0635 28 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 121602575 Common tuf1 elongation factor Tu BARBAKC583_0563 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 121601947 Common ctrA cell cycle transcriptional regulator CtrA BARBAKC583_1019 213 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121601779 Common - FtsX family protein BARBAKC583_0099 31 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 121602091 Pathogen - hypothetical protein BARBAKC583_1066 1 None None None 121602663 Common ruvC Holliday junction resolvase BARBAKC583_0151 198 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 121602813 Common - septum formation initiator family protein BARBAKC583_0533 27 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 121602385 Common - putative DNA primase/helicase BARBAKC583_0187 33 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 121602018 Common gcvP glycine dehydrogenase BARBAKC583_1094 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 121602070 Common pstA phosphate ABC transporter, permease protein PstA BARBAKC583_1226 224 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 121602307 Common - GTPase EngB BARBAKC583_1049 180 COG0218 COG0218, Predicted GTPase General function prediction only 121601913 Common serS seryl-tRNA synthetase BARBAKC583_0519 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602049 Common rplJ 50S ribosomal protein L10 BARBAKC583_0569 211 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 121602669 Common - peptidase, S49 family BARBAKC583_0385 172 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 121601939 Pathogen - hypothetical protein BARBAKC583_1164 1 None None None 121602220 Common atpB F0F1 ATP synthase subunit A BARBAKC583_0376 204 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 121602239 Pathogen - hypothetical protein BARBAKC583_0313 1 None None None 121602753 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase BARBAKC583_1236 138 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 121602221 Common - ATP-dependent protease peptidase subunit BARBAKC583_1261 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 121601786 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein BARBAKC583_1290 236 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 121601817 Common ppa inorganic pyrophosphatase BARBAKC583_0329 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 121602463 Common - inositol monophosphatase family protein BARBAKC583_0159 214 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 121602168 Common purQ phosphoribosylformylglycinamidine synthase subunit I BARBAKC583_0861 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 121602798 Common - hypothetical protein BARBAKC583_1330 74 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 121602200 Common - glutamate--cysteine ligase BARBAKC583_0301 54 COG3572 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 121601796 Common smpB SsrA-binding protein BARBAKC583_0465 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 121602013 Common - conserved hypothetical protein TIGR00046 BARBAKC583_0300 134 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 121601940 Common - PRC-barrel domain protein BARBAKC583_1003 4 COG1873 COG1873, Uncharacterized conserved protein Function unknown 121601853 Common rpsP 30S ribosomal protein S16 BARBAKC583_0069 212 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 121602651 Common hmuU hemin ABC transporter, permease protein BARBAKC583_0456 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 121602362 Common thiS thiamine biosynthesis protein ThiS BARBAKC583_0444 12 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 121602649 Common - histidine triad domain protein BARBAKC583_0579 224 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 121601688 Pathogen - hypothetical protein BARBAKC583_0219 1 None None None 121602506 Common mscL large conductance mechanosensitive channel protein BARBAKC583_0292 136 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 121601705 Common - pseudouridine synthase, RluA family BARBAKC583_0288 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 121602113 Pathogen - hypothetical protein BARBAKC583_1054 1 None None None 121602369 Common frr ribosome recycling factor BARBAKC583_0586 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 121602398 Common efp elongation factor P BARBAKC583_0158 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 121602449 Common ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BARBAKC583_0387 172 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 121602765 Common - sensor histidine kinase BARBAKC583_1354 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 121602400 Common - isocitrate dehydrogenase BARBAKC583_0743 63 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 121601887 Common - thiamine biosynthesis oxidoreductase BARBAKC583_0445 91 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 121602495 Common - ABC transporter, ATP-binding protein BARBAKC583_0796 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 121601692 Common rpmF 50S ribosomal protein L32 BARBAKC583_0122 108 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 121601906 Common - ABC transporter, ATP-binding protein BARBAKC583_1368 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 121601821 Common - hypothetical protein BARBAKC583_0603 13 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 121602900 Common typA GTP-binding protein TypA/BipA BARBAKC583_0330 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 121602525 Common - resolvase/recombinase BARBAKC583_0273 131 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 121602102 Pathogen - hypothetical protein BARBAKC583_0518 1 None None None 121602633 Common - hypothetical protein BARBAKC583_0797 37 COG2938 COG2938, Uncharacterized conserved protein Function unknown 121601771 Common - peptidase, M16 family BARBAKC583_0411 192 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 121602747 Common - sugar isomerase, KpsF/GutQ family BARBAKC583_0335 176 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 121602872 Common clpB chaperone ClpB BARBAKC583_0216 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 121602219 Common ftsZ cell division protein FtsZ BARBAKC583_0941 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 121602030 Pathogen - hypothetical protein BARBAKC583_0239 1 None None None 121602247 Common glyQ glycyl-tRNA synthetase subunit alpha BARBAKC583_0381 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 121602732 Common - organic solvent tolerance protein BARBAKC583_0506 105 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 121602815 Common ugpB glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein BARBAKC583_0349 100 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 121602124 Pathogen - hypothetical protein BARBAKC583_0264 1 None None None 121601965 Common - putative DNA helicase II BARBAKC583_0932 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 121602008 Common dusA tRNA-dihydrouridine synthase A BARBAKC583_0852 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 121602592 Common purB adenylosuccinate lyase BARBAKC583_0857 241 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 121602559 Common rplB 50S ribosomal protein L2 BARBAKC583_0669 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 121602864 Common - hypothetical protein BARBAKC583_0286 13 None None None 121602772 Common - hypothetical protein BARBAKC583_1202 22 COG3908 COG3908, Uncharacterized protein conserved in bacteria Function unknown 121602832 Common sufD FeS assembly protein SufD BARBAKC583_0812 180 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 121602676 Common - NLP/P60 family protein BARBAKC583_1265 72 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 121602240 Common - DnaJ domain protein BARBAKC583_0081 128 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 121601636 Pathogen - hypothetical protein BARBAKC583_0142 1 None None None 121602615 Pathogen - hypothetical protein BARBAKC583_0459 1 None None None 121602766 Pathogen - hypothetical protein BARBAKC583_1077 3 None None None 121602777 Common - putative integrase BARBAKC583_0910 8 None None None 121601955 Pathogen - hypothetical protein BARBAKC583_0422 1 None None None 121601923 Common lpdA1 dihydrolipoamide dehydrogenase BARBAKC583_0027 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 121602823 Common - cytosol aminopeptidase family protein BARBAKC583_1264 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 121602712 Common ccmC heme exporter protein CcmC BARBAKC583_1286 125 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 121602880 Common leuS leucyl-tRNA synthetase BARBAKC583_0104 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602606 Common aroK shikimate kinase BARBAKC583_0038 197 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 121601689 Pathogen - hypothetical protein BARBAKC583_1184 1 None None None 121601825 Common - drug resistance transporter, EmrB/QacA subfamily BARBAKC583_1089 185 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 121602465 Common - putative adhesin/invasin BARBAKC583_0512 29 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121602604 Common ugpE glycerol-3-phosphate ABC transporter, permease protein BARBAKC583_0347 143 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 121602721 Common - bacterial outer membrane lipoprotein, omp19 family BARBAKC583_0020 6 None None None 121602193 Common - ABC transporter, ATP-binding protein BARBAKC583_0131 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 121601993 Common - hypothetical protein BARBAKC583_1156 8 None None None 121601740 Common - hypothetical protein BARBAKC583_0063 10 COG4223 COG4223, Uncharacterized protein conserved in bacteria Function unknown 121601878 Common - SurF1 family protein BARBAKC583_0076 47 COG3346 COG3346, Uncharacterized conserved protein Function unknown 121602846 Common - hypothetical protein BARBAKC583_1018 13 None None None 121602715 Common - hypothetical protein BARBAKC583_0928 9 None None None 121602741 Common fliG flagellar motor switch protein G BARBAKC583_1152 121 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 121602382 Common - transporter, major facilitator family BARBAKC583_0116 91 None None None 121601727 Common nuoI NADH dehydrogenase subunit I BARBAKC583_0786 192 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 121602724 Common - DNA-binding response regulator BARBAKC583_1123 165 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121601712 Common - integral membrane protein BARBAKC583_1325 108 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 121602372 Common hflX GTP-binding proten HflX BARBAKC583_0625 222 COG2262 HflX, GTPases General function prediction only 121602666 Common - polyprenyl synthetase BARBAKC583_0383 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 121602107 Common gap glyceraldehyde-3-phosphate dehydrogenase, type I BARBAKC583_0138 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 121602284 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase BARBAKC583_0504 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 121602252 Common flgA flagellar basal body P-ring biosynthesis protein FlgA BARBAKC583_1140 49 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 121601765 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase BARBAKC583_0950 218 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 121602276 Common ispDF IspD/IspF bifunctional enzyme BARBAKC583_0540 196 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 121602057 Pathogen - hypothetical protein BARBAKC583_0172 1 None None None 121602300 Pathogen - hypothetical protein BARBAKC583_0449 1 None None None 121601889 Common - TldD/PmbA family protein BARBAKC583_1208 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 121602796 Common secY preprotein translocase subunit SecY BARBAKC583_0718 230 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 121602234 Common motA lateral flagellar motor protein MotA BARBAKC583_1148 104 COG1291 MotA, Flagellar motor component Cell motility and secretion 121601666 Common bvrR transcriptional regulatory protein BvrR BARBAKC583_1332 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121602258 Common sdhC succinate dehydrogenase, cytochrome b556 subunit BARBAKC583_0088 53 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 121602839 Common - immunodominant surface antigen, Brp family BARBAKC583_0314 24 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 121602260 Common lysK lysyl-tRNA synthetase BARBAKC583_1360 77 COG1384 LysS, Lysyl-tRNA synthetase (class I) Translation, ribosomal structure and biogenesis 121602696 Common - hypothetical protein BARBAKC583_1370 14 COG5375 COG5375, Uncharacterized protein conserved in bacteria Function unknown 121601844 Common - putative oxidoreductase, NAD-binding BARBAKC583_1106 36 COG4091 COG4091, Predicted homoserine dehydrogenase Amino acid transport and metabolism 121601807 Common - iron-sulfur cluster assembly accessory protein BARBAKC583_0751 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 121601915 Common - hypothetical protein BARBAKC583_1162 40 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 121602482 Common - ribosomal-protein-alanine acetyltransferase BARBAKC583_1242 165 COG0456 RimI, Acetyltransferases General function prediction only 121602231 Common - tRNA (Uracil-5-)-methyltransferase BARBAKC583_0402 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 121602029 Common - hypothetical protein BARBAKC583_0527 116 None None None 121601840 Pathogen - hypothetical protein BARBAKC583_0166 1 None None None 121602645 Common - DEAD/DEAH box helicase domain/helicase conserved C-terminal domain protein BARBAKC583_0608 243 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 121601746 Pathogen - hypothetical protein BARBAKC583_0254 1 None None None 121601753 Common nuoF NADH dehydrogenase (quinone), F subunit BARBAKC583_0783 166 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 121602566 Common parE DNA topoisomerase IV subunit B BARBAKC583_0899 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 121602802 Common ptsN PTS IIA-like nitrogen-regulatory protein PtsN BARBAKC583_1365 139 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 121602554 Common holA DNA polymerase III subunit delta BARBAKC583_0050 34 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 121602051 Common hflB ATP-dependent metallopeptidase HflB BARBAKC583_0168 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 121602851 Common ybgC tol-pal system-associated acyl-CoA thioesterase BARBAKC583_0148 129 COG0824 FcbC, Predicted thioesterase General function prediction only 121602595 Common - putative partition protein ParA BARBAKC583_0283 67 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 121601676 Common fabD malonyl CoA-acyl carrier protein transacylase BARBAKC583_0496 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 121602474 Common ddl D-alanine--D-alanine ligase BARBAKC583_0944 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 121602598 Common psd phosphatidylserine decarboxylase BARBAKC583_0483 94 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 121601720 Common flhB flagellar biosynthesis protein FlhB BARBAKC583_1153 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 121601760 Common purE phosphoribosylaminoimidazole carboxylase, catalytic subunit BARBAKC583_0209 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 121602294 Common rpsA 30S ribosomal protein S1 BARBAKC583_1305 217 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 121601952 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha BARBAKC583_0040 186 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 121602353 Common - sensor histidine kinase BARBAKC583_0249 30 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 121602203 Pathogen - hypothetical protein BARBAKC583_0278 1 None None None 121601828 Pathogen - hypothetical protein BARBAKC583_0647 1 None None None 121601997 Common - endoribonuclease L-PSP BARBAKC583_0581 93 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 121601890 Common - yhiR family protein BARBAKC583_0517 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 121602271 Common - hypothetical protein BARBAKC583_0061 37 COG3786 COG3786, Uncharacterized protein conserved in bacteria Function unknown 121602023 Common nuoM NADH dehydrogenase subunit M BARBAKC583_0790 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 121601938 Common infC translation initiation factor IF-3 BARBAKC583_1341 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 121601830 Common gltL1 glutamate/aspartate ABC transporter, ATP-binding protein BARBAKC583_0655 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 121601793 Common - porin family protein BARBAKC583_0447 13 None None None 121602371 Common - hypothetical protein BARBAKC583_0052 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 121602184 Common argS arginyl-tRNA synthetase BARBAKC583_0749 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602586 Common - putative phage terminase, large subunit, PBSX family BARBAKC583_0227 24 COG1783 XtmB, Phage terminase large subunit General function prediction only 121602377 Common - 3-oxoacyl-(acyl carrier protein) synthase I BARBAKC583_1269 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 121602659 Common - hypothetical protein BARBAKC583_0636 21 None None None 121602395 Common - sensor histidine kinase BARBAKC583_0990 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 121602361 Common ntrX nitrogen assimilation regulatory protein NtrX BARBAKC583_0543 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 121602161 Common int integrase BARBAKC583_1076 20 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 121602114 Common tolR protein TolR BARBAKC583_0146 135 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 121602394 Common - putative ABC transporter ATP-binding protein BARBAKC583_0959 248 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 121602012 Pathogen - hypothetical protein BARBAKC583_0931 2 None None None 121601839 Common lipA lipoyl synthase BARBAKC583_0538 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 121602224 Common aatA aspartate aminotransferase BARBAKC583_0979 235 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 121602370 Common era GTP-binding protein Era BARBAKC583_0474 237 COG1159 Era, GTPase General function prediction only 121602048 Common ndvA beta-(1--2)glucan export ATP-binding protein BARBAKC583_0729 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 121602632 Common dnaQ DNA polymerase III, epsilon subunit BARBAKC583_0004 199 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 121602781 Pathogen - hypothetical protein BARBAKC583_0195 1 None None None 121601898 Pathogen - hypothetical protein BARBAKC583_0913 1 None None None 121602406 Common - iojap homolog BARBAKC583_0321 198 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 121602065 Common - cold-shock DNA-binding family protein BARBAKC583_0977 173 COG1278 CspC, Cold shock proteins Transcription 121602321 Pathogen - hypothetical protein BARBAKC583_0338 1 None None None 121602347 Common - hypothetical protein BARBAKC583_0556 28 COG4765 COG4765, Uncharacterized protein conserved in bacteria Function unknown 121601737 Common trnT tRNA-nucleotidyltransferase BARBAKC583_1006 209 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 121602330 Pathogen - hypothetical protein BARBAKC583_0648 3 None None None 121602441 Common lpdA2 dihydrolipoamide dehydrogenase BARBAKC583_0537 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 121602731 Common - cell wall hydrolase family protein BARBAKC583_1223 31 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 121602133 Pathogen - hypothetical protein BARBAKC583_1060 1 None None None 121602210 Common - hypothetical protein BARBAKC583_0767 63 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 121601719 Common ssb single-stranded DNA-binding protein BARBAKC583_0736 211 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 121602893 Common - LemA family protein BARBAKC583_0896 132 COG1704 LemA, Uncharacterized conserved protein Function unknown 121602546 Pathogen - hypothetical protein BARBAKC583_0232 1 None None None 121602197 Common fliY flagellar motor switch protein fliY BARBAKC583_1151 123 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 121602643 Common - iron chelate ABC transporter, permease protein BARBAKC583_1112 191 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 121602886 Common - rmuC domain protein BARBAKC583_1318 134 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 121601747 Common - hypothetical protein BARBAKC583_0525 25 COG3737 COG3737, Uncharacterized conserved protein Function unknown 121602188 Pathogen - hypothetical protein BARBAKC583_0200 1 None None None 121602177 Common accC acetyl-CoA carboxylase biotin carboxylase subunit BARBAKC583_0761 237 COG0439 AccC, Biotin carboxylase Lipid metabolism 121601834 Common rpoA DNA-directed RNA polymerase subunit alpha BARBAKC583_0722 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 121602306 Common - Ser/Thr protein phosphatase family protein BARBAKC583_1012 28 COG1409 Icc, Predicted phosphohydrolases General function prediction only 121601640 Pathogen - hypothetical protein BARBAKC583_0772 1 None None None 121602436 Common pdhB pyruvate dehydrogenase subunit beta BARBAKC583_0535 212 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 121602627 Common rplW 50S ribosomal protein L23 BARBAKC583_0668 224 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 121602095 Common macB macrolide-specific ABC-type efflux carrier MacB BARBAKC583_0097 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 121602754 Common - hypothetical protein BARBAKC583_0425 3 None None None 121602914 Common trmE tRNA modification GTPase TrmE BARBAKC583_0010 213 COG0486 ThdF, Predicted GTPase General function prediction only 121601937 Common yajC preprotein translocase, YajC subunit BARBAKC583_0523 62 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 121602135 Common argF ornithine carbamoyltransferase BARBAKC583_1291 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 121602422 Pathogen - hypothetical protein BARBAKC583_0888 3 None None None 121601784 Common gltJ1 glutamate/aspartate ABC transporter, permease protein GltJ BARBAKC583_0657 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 121602560 Common glmS D-fructose-6-phosphate amidotransferase BARBAKC583_0755 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 121602414 Common nodN nodulation protein N BARBAKC583_1105 87 COG2030 MaoC, Acyl dehydratase Lipid metabolism 121602287 Pathogen - hypothetical protein BARBAKC583_0884 1 None None None 121602533 Common lepB signal peptidase I BARBAKC583_0472 212 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 121602146 Common afeD iron chelate ABC transporter, permease protein AfeD BARBAKC583_1308 190 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 121602167 Common - heparinase II/III-like family protein BARBAKC583_0073 44 COG5360 COG5360, Uncharacterized protein conserved in bacteria Function unknown 121602881 Common - hypothetical protein BARBAKC583_0156 62 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 121602296 Common sucD succinyl-CoA synthetase subunit alpha BARBAKC583_0024 209 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 121601922 Common - putative biotin ABC transporter, ATP-binding protein BioM BARBAKC583_1195 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 121601941 Common gltX glutamyl-tRNA synthetase BARBAKC583_0600 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 121602917 Common - sensor histidine kinase/reponse regulator BARBAKC583_0853 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 121601869 Common mdh malate dehydrogenase BARBAKC583_0022 177 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 121602094 Common cycK cytochrome c-type biogenesis protein CycK BARBAKC583_0432 159 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 121602603 Common lgt prolipoprotein diacylglyceryl transferase BARBAKC583_0994 204 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 121602343 Pathogen - hypothetical protein BARBAKC583_1182 1 None None None 121602409 Common - RNA methyltransferase, TrmH family BARBAKC583_0558 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 121602740 Pathogen - hypothetical protein BARBAKC583_0771 1 None None None 121602164 Common - hypothetical protein BARBAKC583_0831 20 None None None 121601877 Common thiD phosphomethylpyrimidine kinase BARBAKC583_0441 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 121602519 Common tsf elongation factor Ts BARBAKC583_0584 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 121602136 Common - hypothetical protein BARBAKC583_0235 5 None None None 121602711 Pathogen - hypothetical protein BARBAKC583_1329 1 None None None 121602850 Pathogen - hypothetical protein BARBAKC583_0270 1 None None None 121602229 Common obgE GTPase ObgE BARBAKC583_0317 249 COG0536 Obg, Predicted GTPase General function prediction only 121602714 Common ppnK inorganic polyphosphate/ATP-NAD kinase BARBAKC583_0609 237 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 121602722 Common relA GTP pyrophosphokinase BARBAKC583_0468 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 121602031 Common - hypothetical protein BARBAKC583_0373 25 COG4649 COG4649, Uncharacterized protein conserved in bacteria Function unknown 121602313 Common - hypothetical protein BARBAKC583_0135 27 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 121602865 Common - outer membrane protein, omp25/ropB family BARBAKC583_1214 14 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 121602526 Common rdgB putative deoxyribonucleotide triphosphate pyrophosphatase BARBAKC583_1336 233 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 121602494 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase BARBAKC583_1163 211 COG0196 RibF, FAD synthase Coenzyme metabolism 121602653 Common - hypothetical protein BARBAKC583_1035 13 None None None 121602277 Pathogen - hypothetical protein BARBAKC583_0197 1 None None None 121602218 Common rpmC2 50S ribosomal protein L29 BARBAKC583_0706 166 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 121601946 Common recO DNA repair protein RecO BARBAKC583_0475 87 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 121602634 Common acpS 4'-phosphopantetheinyl transferase BARBAKC583_0471 155 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 121602080 Common rpmE 50S ribosomal protein L31 BARBAKC583_0161 114 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 121602251 Common - coproporphyrinogen III oxidase BARBAKC583_1337 207 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 121602901 Pathogen - hypothetical protein BARBAKC583_0862 1 None None None 121602833 Common fabA 3-hydroxydecanoyl-(acyl carrier protein) dehydratase BARBAKC583_1268 81 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 121601964 Pathogen - hypothetical protein BARBAKC583_0758 3 None None None 121602009 Pathogen - hypothetical protein BARBAKC583_0304 1 None None None 121602248 Common ihfB integration host factor subunit beta BARBAKC583_1371 206 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 121602908 Pathogen - hypothetical protein BARBAKC583_1168 1 None None None 121601907 Common - ABC transporter, permease/ATP-binding protein BARBAKC583_0160 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 121601685 Common - hypothetical protein BARBAKC583_0213 14 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 121602504 Common ruvB Holliday junction DNA helicase B BARBAKC583_0149 221 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 121602700 Common - acyl carrier protein BARBAKC583_0621 16 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 121602591 Common clpA ATP-dependent Clp protease ATP-binding subunit ClpA BARBAKC583_0580 238 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 121602295 Common - hypothetical protein BARBAKC583_0919 102 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 121602085 Common - RNA methyltransferase, TrmH family BARBAKC583_1005 160 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 121602264 Common lnt apolipoprotein N-acyltransferase BARBAKC583_1247 165 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 121601954 Common rplR 50S ribosomal protein L18 BARBAKC583_0714 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 121602174 Common - hypothetical protein BARBAKC583_1042 91 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 121601706 Common - cyclase/dehydrase family protein BARBAKC583_0539 101 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 121601748 Common recR recombination protein RecR BARBAKC583_1240 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 121602695 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase BARBAKC583_0851 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 121602067 Common - putative membrane-bound lytic murein transglycosylase BARBAKC583_0333 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 121601754 Common - cold-shock DNA-binding family protein BARBAKC583_0834 149 COG1278 CspC, Cold shock proteins Transcription 121602803 Common corC magnesium and cobalt efflux protein CorC BARBAKC583_1246 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 121601789 Pathogen - hypothetical protein BARBAKC583_1180 3 None None None 121602481 Common - molybdopterin biosynthesis protein MoeB BARBAKC583_1231 224 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 121602379 Common - 3-oxoacyl-(acyl carrier protein) synthase II BARBAKC583_0619 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 121602512 Common gpmA phosphoglyceromutase BARBAKC583_1052 175 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 121602778 Common - FtsK/SpoIIIE family protein BARBAKC583_0291 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 121601843 Pathogen - hypothetical protein BARBAKC583_1158 1 None None None 121602434 Common xerC site-specific tyrosine recombinase XerC BARBAKC583_0083 226 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 121602596 Common lpcC lipopolysaccharide core biosynthesis mannosyltransferase lpcC BARBAKC583_0983 166 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 121601822 Pathogen - hypothetical protein BARBAKC583_1073 1 None None None 121601983 Common flaA flagellin A BARBAKC583_1040 78 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 121602101 Common - putative peroxiredoxin BARBAKC583_1176 91 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 121602056 Common - hypothetical protein BARBAKC583_0230 9 None None None 121602684 Common - hypothetical protein BARBAKC583_1339 112 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 121601713 Common fliP flagellar biosynthesis protein FliP BARBAKC583_1135 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 121601654 Pathogen - hypothetical protein BARBAKC583_0231 1 None None None 121601772 Common nadE NAD synthetase BARBAKC583_0606 240 COG0171 NadE, NAD synthase Coenzyme metabolism 121602059 Common - DNA-binding response regulator BARBAKC583_0435 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121602808 Common - hypothetical protein BARBAKC583_1372 8 None None None 121601819 Common - putative FeS assembly scaffold SufA BARBAKC583_0616 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 121602339 Common - glutamate dehydrogenase, NAD-specific BARBAKC583_0066 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 121602050 Common cyoE protoheme IX farnesyltransferase BARBAKC583_0405 164 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 121601914 Common nuoD NADH dehydrogenase subunit D BARBAKC583_0781 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 121602879 Common fliM flagellar motor switch protein FliM BARBAKC583_1149 81 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 121602028 Common - 5,10-methenyltetrahydrofolate synthetase BARBAKC583_0203 166 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 121602841 Common pcs phosphatidylcholine synthase BARBAKC583_0817 23 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 121602733 Common divK cell division response regulator DivK BARBAKC583_0903 224 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 121601766 Common clpX ATP-dependent protease ATP-binding subunit BARBAKC583_0547 222 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 121602233 Common - rhodanese-like domain protein BARBAKC583_1091 110 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 121601726 Common - putative lipoprotein BARBAKC583_0336 7 None None None 121602457 Common pncB nicotinate phosphoribosyltransferase BARBAKC583_1307 60 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 121602795 Pathogen - hypothetical protein BARBAKC583_1280 1 None None None 121602257 Common atpD F0F1 ATP synthase subunit beta BARBAKC583_0114 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 121602845 Pathogen - hypothetical protein BARBAKC583_1107 1 None None None 121602187 Pathogen - hypothetical protein BARBAKC583_1237 1 None None None 121602417 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III BARBAKC583_0638 228 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 121601777 Common - conserved hypothetical protein TIGR00043 BARBAKC583_1245 205 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 121602734 Common - glutaredoxin homolog BARBAKC583_0865 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 121601763 Pathogen - hypothetical protein BARBAKC583_0244 1 None None None 121602536 Common xth3 exodeoxyribonuclease III BARBAKC583_0692 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 121602364 Pathogen - hypothetical protein BARBAKC583_1179 1 None None None 121602223 Common - hypothetical protein BARBAKC583_0642 182 COG0759 COG0759, Uncharacterized conserved protein Function unknown 121602456 Common - peptidase, S9A/B/C family protein BARBAKC583_0421 102 COG1770 PtrB, Protease II Amino acid transport and metabolism 121602015 Common - dipeptide ABC transporter, periplasmic dipeptide-binding protein BARBAKC583_1030 209 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 121601695 Common hfq RNA-binding protein Hfq BARBAKC583_0624 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 121602072 Common - F0F1 ATP synthase subunit B BARBAKC583_0379 33 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 121602064 Common - Hsp20/alpha crystallin family protein BARBAKC583_0614 81 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 121601781 Common - glutamine amidotransferase BARBAKC583_0065 193 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 121601794 Common coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase BARBAKC583_1349 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 121602674 Common - sensor histidine kinase BARBAKC583_0436 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 121601977 Common - ABC transporter, periplasmic substrate-binding protein BARBAKC583_0350 163 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 121602667 Common - hypothetical protein BARBAKC583_0961 41 COG2899 COG2899, Uncharacterized protein conserved in bacteria Function unknown 121602159 Common nuoE NADH dehydrogenase subunit E BARBAKC583_0782 154 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 121601707 Pathogen - hypothetical protein BARBAKC583_0744 1 None None None 121602857 Common rplF 50S ribosomal protein L6 BARBAKC583_0713 243 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 121602202 Common - NOL1/NOP2/sun family protein BARBAKC583_0343 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 121602153 Common - putative flagellar motor protein MotB BARBAKC583_1127 97 COG1360 MotB, Flagellar motor protein Cell motility and secretion 121602635 Common - hydrolase, alpha/beta fold family protein BARBAKC583_0832 150 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 121602642 Common pdxH pyridoxamine 5'-phosphate oxidase BARBAKC583_0394 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 121602265 Common tolQ protein TolQ BARBAKC583_0147 154 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 121602789 Pathogen - hypothetical protein BARBAKC583_0245 1 None None None 121602585 Common gcvH glycine cleavage system protein H BARBAKC583_1095 185 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 121602198 Common proS prolyl-tRNA synthetase BARBAKC583_0794 246 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602628 Common proA gamma-glutamyl phosphate reductase BARBAKC583_0319 189 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 121602178 Common - hypothetical protein BARBAKC583_0078 54 COG1738 COG1738, Uncharacterized conserved protein Function unknown 121601806 Pathogen - hypothetical protein BARBAKC583_0958 1 None None None 121602437 Common - lysozyme BARBAKC583_1057 54 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 121602589 Common - type I secretion outer membrane protein, TolC family BARBAKC583_0652 114 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121602396 Common nrdH Glutaredoxin-like protein NrdH BARBAKC583_0354 33 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 121602378 Common ccrMIM modification methylase CcrMI BARBAKC583_0413 142 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 121602205 Common nuoJ NADH dehydrogenase subunit J BARBAKC583_0787 69 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 121601641 Common rpsL 30S ribosomal protein S12 BARBAKC583_0693 238 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 121601985 Common bp26 26 kDa periplasmic immunogenic protein BARBAKC583_0965 64 COG2968 COG2968, Uncharacterized conserved protein Function unknown 121602286 Common - hypothetical protein BARBAKC583_0897 87 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 121602652 Common - translocator protein, LysE family BARBAKC583_1363 125 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 121602425 Common cycL cytochrome c-type biogenesis protein CycL BARBAKC583_0433 91 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 121602543 Common kdtA 3-deoxy-D-manno-octulosonic-acid transferase BARBAKC583_1204 127 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 121602344 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase BARBAKC583_0400 226 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 121602683 Common - uracil-DNA glycosylase, family 4 BARBAKC583_0440 153 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 121602322 Common pal peptidoglycan-associated lipoprotein BARBAKC583_0165 155 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 121602140 Common - surface antigen/outer membrane protein, OMP85 family BARBAKC583_1344 138 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 121602297 Common ribE riboflavin synthase subunit alpha BARBAKC583_0632 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 121602346 Common - conserved hypothetical protein TIGR00044 BARBAKC583_0102 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 121602331 Pathogen - hypothetical protein BARBAKC583_1078 3 None None None 121602106 Pathogen - hypothetical protein BARBAKC583_0177 1 None None None 121602725 Common ilvE branched-chain amino acid aminotransferase BARBAKC583_0747 206 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 121602620 Pathogen - hypothetical protein BARBAKC583_0437 1 None None None 121601833 Common rplC 50S ribosomal protein L3 BARBAKC583_0698 218 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 121601996 Common trpS tryptophanyl-tRNA synthetase BARBAKC583_1167 225 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602194 Common - ABC transporter, permease/ATP-binding protein BARBAKC583_0482 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 121601936 Common dme malic enzyme BARBAKC583_0622 212 COG0281 SfcA, Malic enzyme Energy production and conversion 121602605 Common recN DNA repair protein RecN BARBAKC583_0938 203 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 121602570 Common rplM 50S ribosomal protein L13 BARBAKC583_0901 236 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 121602022 Pathogen - hypothetical protein BARBAKC583_0015 3 None None None 121602873 Common - chemotaxis protein BARBAKC583_1126 11 None None None 121601738 Common - putative protein-L-isoaspartate O-methyltransferase BARBAKC583_0684 156 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 121602179 Common - response regulator BARBAKC583_0612 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 121602888 Pathogen - hypothetical protein BARBAKC583_1031 1 None None None 121602660 Common - transglycosylase, SLT domain protein BARBAKC583_0462 153 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 121602887 Common rrmJ ribosomal RNA large subunit methyltransferase J BARBAKC583_0316 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 121602032 Common nuoB NADH dehydrogenase subunit B BARBAKC583_0779 191 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 121602707 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase BARBAKC583_1016 217 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 121602183 Common - NAD dependent epimerase/dehydratase family protein BARBAKC583_1353 136 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 121602134 Common rpsH 30S ribosomal protein S8 BARBAKC583_0712 249 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 121602532 Common holC DNA polymerase III subunit chi BARBAKC583_0509 35 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 121601900 Common cvpA CvpA protein BARBAKC583_0488 37 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 121602755 Common - hypothetical protein BARBAKC583_0036 8 COG3895 COG3895, Predicted periplasmic protein General function prediction only 121602105 Common - guanylate kinase BARBAKC583_0502 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 121601664 Common dcd 2'-deoxycytidine 5'-triphosphate deaminase BARBAKC583_1200 64 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 121602250 Common etfA electron transfer flavoprotein, alpha subunit BARBAKC583_1038 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 121602840 Common - cytochrome oxidase assembly protein BARBAKC583_0627 54 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 121601836 Common rplL 50S ribosomal protein L7/L12 BARBAKC583_0570 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 121602502 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II BARBAKC583_0499 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 121602891 Common - 50S ribosomal protein L25/general stress protein Ctc BARBAKC583_0999 191 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 121602621 Common - peptidase, M3 family BARBAKC583_0332 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 121602713 Common atpA F0F1 ATP synthase subunit alpha BARBAKC583_0112 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 121601646 Pathogen - hypothetical protein BARBAKC583_0280 1 None None None 121602726 Common - efflux transporter, RND family, MFP subunit BARBAKC583_0305 143 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 121602212 Common - putative anti-repressor protein, AntA/AntB family BARBAKC583_1070 24 COG3561 COG3561, Phage anti-repressor protein Transcription 121602061 Common rplN 50S ribosomal protein L14 BARBAKC583_0708 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 121602767 Pathogen - hypothetical protein BARBAKC583_0169 1 None None None 121602145 Common lpxB lipid-A-disaccharide synthase BARBAKC583_0594 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 121602348 Pathogen - hypothetical protein BARBAKC583_0909 1 None None None 121602647 Common - aldehyde dehydrogenase (NAD) family protein BARBAKC583_0289 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 121601811 Common rpsI 30S ribosomal protein S9 BARBAKC583_0902 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 121602066 Common adk adenylate kinase BARBAKC583_0719 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 121602565 Common trx thioredoxin BARBAKC583_1358 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 121602176 Common rplP 50S ribosomal protein L16 BARBAKC583_0673 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 121602629 Common - hypothetical protein BARBAKC583_0643 48 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 121602163 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase BARBAKC583_0092 133 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 121602131 Common - putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein BARBAKC583_0658 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 121601924 Common rplX 50S ribosomal protein L24 BARBAKC583_0709 213 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 121602435 Common rpsC 30S ribosomal protein S3 BARBAKC583_0704 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 121601730 Common clpS ATP-dependent Clp protease adaptor protein ClpS BARBAKC583_0578 118 COG2127 COG2127, Uncharacterized conserved protein Function unknown 121602014 Common - hypothetical protein BARBAKC583_0233 5 None None None 121601764 Common - hypothetical protein BARBAKC583_0154 32 COG4645 COG4645, Uncharacterized protein conserved in bacteria Function unknown 121602547 Common - hypothetical protein BARBAKC583_0623 130 COG1511 COG1511, Predicted membrane protein Function unknown 121601999 Pathogen - hypothetical protein BARBAKC583_0921 1 None None None 121602539 Common dnaB replicative DNA helicase BARBAKC583_0490 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 121601799 Common thiG thiazole synthase BARBAKC583_0443 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 121601832 Common addA double-strand break repair helicase AddA BARBAKC583_1357 228 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 121602405 Common prfB peptide chain release factor 2 BARBAKC583_0804 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 121602389 Common - hypothetical protein BARBAKC583_0854 13 None None None 121601684 Pathogen - hypothetical protein BARBAKC583_0877 1 None None None 121602047 Common coaE dephospho-CoA kinase BARBAKC583_0005 205 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 121602141 Common - putative non-motile and phage-resistance protein BARBAKC583_0438 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 121601814 Common - RNA methyltransferase, TrmH family, group 1 BARBAKC583_0828 153 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 121601975 Pathogen - hypothetical protein BARBAKC583_0549 1 None None None 121602195 Common ispZ intracellular septation protein A BARBAKC583_0016 83 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 121602150 Common - DegT/DnrJ/EryC1/StrS family aminotransferase BARBAKC583_1023 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 121602363 Common - SCO1/SenC family protein BARBAKC583_0934 110 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 121601883 Common - two-component response regulator BARBAKC583_0250 105 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 121602156 Common - putative DNA-3-methyladenine glycosylase I BARBAKC583_1033 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 121601700 Common - SapC family protein BARBAKC583_0084 26 None None None 121602675 Common pstS phosphate ABC transporter, periplasmic phosphate-binding protein BARBAKC583_1228 120 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 121602191 Common fusA1 elongation factor G BARBAKC583_0663 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 121602043 Common gor glutathione reductase BARBAKC583_0604 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 121602074 Pathogen - hypothetical protein BARBAKC583_0914 1 None None None 121602856 Common - thermophilic metalloprotease BARBAKC583_1222 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 121602749 Common - aminomethyltransferase BARBAKC583_0479 100 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 121601991 Common alaS alanyl-tRNA synthetase BARBAKC583_0728 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602380 Common - hypothetical protein BARBAKC583_0001 117 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 121602446 Common - cytidine and deoxycytidylate deaminase zinc-binding protein BARBAKC583_1211 207 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 121602381 Common dprA DNA protecting protein DprA BARBAKC583_0842 210 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 121602665 Common metK S-adenosylmethionine synthetase BARBAKC583_1249 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 121602468 Pathogen - outer membrane autotransporter BARBAKC583_1132 5 COG1315 COG1315, Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain DNA replication, recombination, and repair 121601880 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase BARBAKC583_0590 190 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 121602393 Common hflK HflK protein BARBAKC583_0924 145 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 121601694 Common - pyridoxal phosphate biosynthetic protein PdxJ BARBAKC583_0918 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 121601858 Common rpsF 30S ribosomal protein S6 BARBAKC583_0494 206 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 121601892 Common ubiC chorismate pyruvate lyase BARBAKC583_0971 36 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 121602816 Common - TolA domain protein BARBAKC583_0145 7 COG5373 COG5373, Predicted membrane protein Function unknown 121601860 Common dapA dihydrodipicolinate synthase BARBAKC583_0464 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 121602794 Common - hypothetical protein BARBAKC583_0987 8 None None None 121601769 Pathogen - hypothetical protein BARBAKC583_0511 1 None None None 121602058 Pathogen - hypothetical protein BARBAKC583_0190 1 None None None 121602912 Common - acetyltransferase, GNAT family protein BARBAKC583_1011 82 COG3153 COG3153, Predicted acetyltransferase General function prediction only 121602450 Pathogen - hypothetical protein BARBAKC583_0759 1 None None None 121601722 Common rpmA 50S ribosomal protein L27 BARBAKC583_0310 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 121602053 Pathogen - hypothetical protein BARBAKC583_0179 1 None None None 121602121 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BARBAKC583_0497 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 121601674 Common - hypothetical protein BARBAKC583_0186 2 None None None 121601729 Pathogen - hypothetical protein BARBAKC583_0885 1 None None None 121601739 Common - immunodominant surface antigen, Brp family BARBAKC583_0311 26 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 121602355 Common rpsE 30S ribosomal protein S5 BARBAKC583_0715 247 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 121602256 Pathogen - hypothetical protein BARBAKC583_0681 3 None None None 121602033 Pathogen - hypothetical protein BARBAKC583_0906 1 None None None 121602374 Pathogen - hypothetical protein BARBAKC583_0139 1 None None None 121602551 Pathogen - hypothetical protein BARBAKC583_1297 1 None None None 121601864 Common - hypothetical protein BARBAKC583_0993 29 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 121602432 Common rpmB 50S ribosomal protein L28 BARBAKC583_0077 137 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 121602087 Common gltL2 glutamate/aspartate ABC transporter, ATP-binding protein BARBAKC583_0688 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 121602309 Common - invasion associated locus B family protein BARBAKC583_0800 15 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 121602593 Common - transcriptional regulator, MerR family BARBAKC583_0640 92 COG0789 SoxR, Predicted transcriptional regulators Transcription 121602416 Common - transporter, major facilitator family BARBAKC583_0742 127 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 121602518 Common truB tRNA pseudouridine synthase B BARBAKC583_1256 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 121602784 Common parC DNA topoisomerase IV subunit A BARBAKC583_0867 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 121601656 Common rplV 50S ribosomal protein L22 BARBAKC583_0671 215 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 121602694 Common - protease Do family protein BARBAKC583_0922 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 121602292 Pathogen - hypothetical protein BARBAKC583_1161 1 None None None 121601714 Pathogen - hypothetical protein BARBAKC583_1366 1 None None None 121601697 Common purL phosphoribosylformylglycinamidine synthase II BARBAKC583_0863 235 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 121602760 Pathogen - hypothetical protein BARBAKC583_0773 1 None None None 121602137 Common rplD 50S ribosomal protein L4 BARBAKC583_0699 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 121602682 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase BARBAKC583_0531 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 121602337 Common - 3-deoxy-7-phosphoheptulonate synthase BARBAKC583_0605 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 121602824 Common fmt methionyl-tRNA formyltransferase BARBAKC583_1320 216 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 121601917 Common - polyprenyl synthetase BARBAKC583_0120 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 121602172 Pathogen - hypothetical protein BARBAKC583_0045 1 None None None 121601755 Common cvpA1 amidophosphoribosyltransferase BARBAKC583_0486 239 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 121602497 Common sucB dihydrolipoamide acetyltransferase BARBAKC583_0026 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 121602100 Common - MgpS BARBAKC583_0125 35 None None None 121602499 Common carA carbamoyl phosphate synthase small subunit BARBAKC583_0972 234 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 121602608 Common - hypothetical protein BARBAKC583_0105 12 COG5468 COG5468, Predicted secreted (periplasmic) protein Function unknown 121602128 Common aspS aspartyl-tRNA synthetase BARBAKC583_0868 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602569 Common cycJ cytochrome c-type biogenesis protein CcmE BARBAKC583_0431 94 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 121602727 Pathogen - hypothetical protein BARBAKC583_0282 1 None None None 121602909 Common ubiG 3-demethylubiquinone-9 3-methyltransferase BARBAKC583_0369 110 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 121602657 Common - Na+/Pi-cotransporter family protein BARBAKC583_0969 69 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 121601741 Common - hypothetical protein BARBAKC583_0008 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 121601908 Common groES co-chaperonin GroES BARBAKC583_1173 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 121601859 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BARBAKC583_0406 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 121602708 Common engA GTP-binding protein EngA BARBAKC583_0374 233 COG1160 COG1160, Predicted GTPases General function prediction only 121602241 Common rpoC DNA-directed RNA polymerase subunit beta' BARBAKC583_0572 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 121602002 Common - thioredoxin domain protein BARBAKC583_0763 87 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 121602636 Common - putative DNA-binding transcriptional regulator BARBAKC583_0274 5 None None None 121602866 Common ihfA integration host factor subunit alpha BARBAKC583_0639 189 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 121602889 Common purN phosphoribosylglycinamide formyltransferase BARBAKC583_0764 223 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 121601638 Common - putative RNA-metabolising metallo-beta-lactamase BARBAKC583_0793 156 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 121602906 Pathogen - hypothetical protein BARBAKC583_0185 1 None None None 121602006 Common - ABC transporter, permease protein BARBAKC583_0048 125 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 121602774 Common sucC succinyl-CoA synthetase subunit beta BARBAKC583_0023 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 121601957 Common - hemolysin A BARBAKC583_0401 133 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 121601665 Common folE GTP cyclohydrolase I BARBAKC583_0644 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 121602590 Common - metallo-beta-lactamase family protein BARBAKC583_0818 70 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 121602228 Common ugpA glycerol-3-phosphate ABC transporter, permease protein BARBAKC583_0348 162 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 121601963 Common - hypothetical protein BARBAKC583_0686 3 COG3827 COG3827, Uncharacterized protein conserved in bacteria Function unknown 121601778 Common - transporter, major facilitator family BARBAKC583_0973 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 121602616 Common tilS tRNA(Ile)-lysidine synthetase BARBAKC583_0167 38 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 121602779 Common - BolA family protein BARBAKC583_0082 57 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 121601647 Common rpmH ribosomal protein L34 BARBAKC583_1046 191 None None None 121602327 Common phaC putative monovalent cation/H+ antiporter subunit C BARBAKC583_0031 104 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 121602169 Pathogen - hypothetical protein BARBAKC583_0181 1 None None None 121602834 Common - O-sialoglycoprotein endopeptidase BARBAKC583_0062 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 121602311 Common - ATPase, AAA family BARBAKC583_1007 187 COG0714 COG0714, MoxR-like ATPases General function prediction only 121602882 Pathogen - hypothetical protein BARBAKC583_0225 1 None None None 121602077 Pathogen - hypothetical protein BARBAKC583_0978 1 None None None 121601949 Common rplX 50S ribosomal protein L24 BARBAKC583_0677 213 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 121602484 Common - LysM/M23 peptidase domain protein BARBAKC583_0521 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 121601956 Common - HAD hydrolase, family IA BARBAKC583_0412 169 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 121601708 Common - penicillin-binding protein, 1A BARBAKC583_0803 201 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 121601808 Common - ABC transporter, permease protein BARBAKC583_0795 219 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 121602142 Common - PPIC-type PPIASE domain protein BARBAKC583_0362 162 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 121602689 Common cobS cobaltochelatase, CobS subunit BARBAKC583_0080 62 COG0714 COG0714, MoxR-like ATPases General function prediction only 121602069 Common - Tim44 domain protein BARBAKC583_1294 42 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 121602875 Common groEL chaperonin GroEL BARBAKC583_1172 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 121602750 Pathogen - hypothetical protein BARBAKC583_0118 1 None None None 121602475 Pathogen - hypothetical protein BARBAKC583_0133 1 None None None 121602192 Common - enoyl-(acyl carrier protein) reductase BARBAKC583_0396 228 COG0623 FabI, Enoyl- acyl-carrier-protein 121602838 Common ftsQ cell division protein FtsQ BARBAKC583_0943 78 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 121602211 Pathogen - hypothetical protein BARBAKC583_0221 1 None None None 121602501 Common fliI flagellum-specific ATP synthase BARBAKC583_1145 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 121601835 Common exbD TonB system transport protein ExbD BARBAKC583_0174 136 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 121602285 Common rpsU 30S ribosomal protein S21 BARBAKC583_0302 39 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 121602115 Common addB double-strand break repair protein AddB BARBAKC583_1356 44 COG3893 COG3893, Inactivated superfamily I helicase DNA replication, recombination, and repair 121602527 Common fbaB fructose-bisphosphate aldolase, class I BARBAKC583_0141 34 COG3588 COG3588, Fructose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 121601813 Common flgK flagellar hook-associated protein FlgK BARBAKC583_1121 98 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 121602204 Pathogen - hypothetical protein BARBAKC583_0207 1 None None None 121602622 Common - DNA-binding response regulator BARBAKC583_0989 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121602424 Common cysS cysteinyl-tRNA synthetase BARBAKC583_0481 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602580 Common - RNA methyltransferase, TrmH family BARBAKC583_1374 214 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 121601637 Pathogen - hypothetical protein BARBAKC583_1218 1 None None None 121602548 Common gidB glucose-inhibited division protein B BARBAKC583_0012 198 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 121601901 Common - salicylate hydroxylase BARBAKC583_0871 56 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 121602757 Common rpsB 30S ribosomal protein S2 BARBAKC583_0583 224 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 121602768 Common rnc ribonuclease III BARBAKC583_0473 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 121602756 Common nuoL NADH dehydrogenase subunit L BARBAKC583_0789 208 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 121602075 Common metQ D-methionine ABC transporter, periplasmic methionine-binding protein BARBAKC583_1102 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 121602531 Common aroE shikimate 5-dehydrogenase BARBAKC583_0006 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 121602646 Pathogen - hypothetical protein BARBAKC583_0892 2 None None None 121602843 Common afeA iron chelate ABC transporter, periplasmic iron chelate-binding protein BARBAKC583_1311 166 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 121601863 Common pheS phenylalanyl-tRNA synthetase, alpha subunit BARBAKC583_1313 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 121601935 Pathogen - hypothetical protein BARBAKC583_0299 1 None None None 121602847 Common - integral membrane protein TerC family/CBS/transporter domain BARBAKC583_0880 216 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 121602572 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase BARBAKC583_0591 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 121602196 Common - endonuclease/exonuclease/phosphatase family protein BARBAKC583_0003 65 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 121602447 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase BARBAKC583_0201 209 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 121601782 Common - enoyl-(acyl carrier protein) reductase BARBAKC583_1270 216 COG0623 FabI, Enoyl- acyl-carrier-protein 121602123 Pathogen - hypothetical protein BARBAKC583_0268 1 None None None 121601874 Common - peptidase, M48 family BARBAKC583_0127 128 COG4784 COG4784, Putative Zn-dependent protease General function prediction only 121601701 Common ugpC glycerol-3-phosphate ABC transporter, ATP-binding protein BARBAKC583_0346 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 121602410 Common - acyltransferase family protein BARBAKC583_0043 166 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 121602748 Common - putative universal stress protein BARBAKC583_0342 32 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 121601925 Common trkA potassium transporter peripheral membrane component BARBAKC583_0544 148 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 121602328 Common - amino acid ABC transporter, periplasmic amino acid-binding protein BARBAKC583_0598 172 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 121601992 Common miaB tRNA-i(6)A37 thiotransferase enzyme MiaB BARBAKC583_1243 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 121602132 Common - putative L-asparaginase BARBAKC583_1262 117 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 121602017 Common flaF flagellar biosynthesis regulatory protein FlaF BARBAKC583_1119 15 COG5442 FlaF, Flagellar biosynthesis regulator FlaF Cell motility and secretion 121602469 Common nuoH NADH dehydrogenase subunit H BARBAKC583_0785 187 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 121602042 Common - SurA domain protein BARBAKC583_0505 60 None None None 121602082 Common rpsJ1 ribosomal protein S10 BARBAKC583_0665 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 121602825 Common - putative lipoprotein BARBAKC583_0646 25 COG4782 COG4782, Uncharacterized protein conserved in bacteria Function unknown 121602483 Common - LolA family protein BARBAKC583_0094 34 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 121601959 Common phoU phosphate transport system regulatory protein PhoU BARBAKC583_1224 197 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 121602762 Common - DsbB domain protein BARBAKC583_0182 33 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 121602189 Common dnaX DNA polymerase III subunits gamma and tau BARBAKC583_1238 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 121601831 Common xseB exodeoxyribonuclease VII small subunit BARBAKC583_0399 115 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 121602046 Pathogen - hypothetical protein BARBAKC583_1331 1 None None None 121602399 Common - hypothetical protein BARBAKC583_0070 8 COG5508 COG5508, Uncharacterized conserved small protein Function unknown 121601987 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase BARBAKC583_0816 134 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 121602270 Common feuP transcriptional regulator FeuP BARBAKC583_0428 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121601974 Common - conserved hypothetical protein TIGR02300 BARBAKC583_1302 17 COG4530 COG4530, Uncharacterized protein conserved in bacteria Function unknown 121602404 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A BARBAKC583_0835 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 121602907 Common - putative ribosomal RNA small subunit methyltransferase B BARBAKC583_0072 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 121602783 Common purK phosphoribosylaminoimidazole carboxylase, ATPase subunit BARBAKC583_0208 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 121601916 Common - hypothetical protein BARBAKC583_0238 27 COG4675 MdpB, Microcystin-dependent protein Function unknown 121601655 Common ubiB 2-polyprenylphenol 6-hydroxylase BARBAKC583_1348 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 121601884 Common xerD tyrosine recombinase XerD BARBAKC583_0039 226 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 121601909 Pathogen - hypothetical protein BARBAKC583_0290 1 None None None 121602520 Common greA transcription elongation factor GreA BARBAKC583_0984 204 COG0782 GreA, Transcription elongation factor Transcription 121602594 Common - hypothetical protein BARBAKC583_0891 4 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 121602293 Common cyoA cytochrome o ubiquinol oxidase, subunit II BARBAKC583_1275 110 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 121601810 Common parA chromosome partitioning protein ParA BARBAKC583_0013 214 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 121601696 Common - putative SAM-dependent methyltransferase BARBAKC583_1373 59 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 121601986 Common - aminotransferase, class V BARBAKC583_0809 235 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 121602171 Common - putative HflC protein BARBAKC583_0923 202 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 121602761 Common - hypothetical protein BARBAKC583_0766 156 COG0628 PerM, Predicted permease General function prediction only 121602236 Pathogen - hypothetical protein BARBAKC583_0524 1 None None None 121601715 Common aroQ 3-dehydroquinate dehydratase BARBAKC583_1276 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 121601731 Common czrB metal cation efflux protein CzrB BARBAKC583_1013 217 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 121602517 Common - methyltransferase domain protein BARBAKC583_1259 77 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 121602563 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase BARBAKC583_1347 215 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 121602623 Pathogen - hypothetical protein BARBAKC583_0510 1 None None None 121601756 Common - hypothetical protein BARBAKC583_0228 9 None None None 121602083 Common irr iron response regulator Irr BARBAKC583_1267 152 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 121602693 Common - DnaJ family protein BARBAKC583_0395 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 121601728 Pathogen - hypothetical protein BARBAKC583_0339 1 None None None 121602034 Common - N-acetylmuramoyl-L-alanine amidase family protein BARBAKC583_0904 103 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 121601998 Common lpxK tetraacyldisaccharide 4'-kinase BARBAKC583_1203 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 121602817 Common flgH flagellar basal body L-ring protein BARBAKC583_1137 98 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 121602892 Common - hypothetical protein BARBAKC583_1239 169 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 121602451 Common rpoH2 RNA polymerase factor sigma-32 BARBAKC583_0287 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 121601809 Common - FAD dependent oxidoreductase BARBAKC583_0296 134 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 121602129 Common prs ribose-phosphate pyrophosphokinase BARBAKC583_0998 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 121602122 Common nhaA Na+/H+ antiporter NhaA BARBAKC583_0371 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 121601849 Common - putative SAM-dependent methyltransferase protein BARBAKC583_0058 42 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 121602710 Common rplV 50S ribosomal protein L22 BARBAKC583_0703 215 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 121602607 Common rplU 50S ribosomal protein L21 BARBAKC583_0309 214 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 121602356 Common gshB glutathione synthetase BARBAKC583_1229 136 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 121602039 Pathogen - hypothetical protein BARBAKC583_0107 1 None None None 121602793 Pathogen - hypothetical protein BARBAKC583_0253 1 None None None 121601675 Pathogen - hypothetical protein BARBAKC583_0353 1 None None None 121601721 Common sufE cysteine desulfuration protein SufE BARBAKC583_0424 97 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 121602411 Common purA adenylosuccinate synthetase BARBAKC583_0285 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 121602433 Common rnpA ribonuclease P BARBAKC583_1047 45 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 121602282 Common - putative glutamine synthetase BARBAKC583_0295 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 121602373 Common dapF diaminopimelate epimerase BARBAKC583_0019 191 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 121602084 Common cdsA phosphatidate cytidylyltransferase BARBAKC583_0587 212 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 121602510 Pathogen - hypothetical protein BARBAKC583_1300 2 None None None 121602227 Common truA tRNA pseudouridine synthase A BARBAKC583_1321 234 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 121602314 Pathogen - hypothetical protein BARBAKC583_0775 1 None None None 121602552 Common - pyridoxal-dependent decarboxylase BARBAKC583_1090 216 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 121601897 Common rplP 50S ribosomal protein L16 BARBAKC583_0705 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 121601790 Common - adhesin/haemagglutinin, bartonella repeat protein family BARBAKC583_0912 42 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 121602557 Common - hypothetical protein BARBAKC583_0075 6 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 121602673 Common - hypothetical protein BARBAKC583_0954 9 COG5462 COG5462, Predicted secreted (periplasmic) protein Function unknown 121602915 Pathogen - hypothetical protein BARBAKC583_0267 1 None None None 121601669 Common - conserved hypothetical protein TIGR00246 BARBAKC583_0322 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 121602858 Common - sporulation and cell division repeat protein BARBAKC583_0748 13 None None None 121602025 Pathogen - hypothetical protein BARBAKC583_0576 1 None None None 121602534 Common folA dihydrofolate reductase BARBAKC583_0925 144 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 121602249 Common argC N-acetyl-gamma-glutamyl-phosphate reductase BARBAKC583_0628 201 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 121601962 Common ribH riboflavin synthase subunit beta BARBAKC583_0633 212 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 121602742 Common - ABC transporter, periplasmic substrate-binding protein BARBAKC583_0047 58 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 121602528 Pathogen - hypothetical protein BARBAKC583_0242 1 None None None 121601879 Common ileS isoleucyl-tRNA synthetase BARBAKC583_1212 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121601761 Common - DEAD/DEAH box helicase domain/helicase conserved C-terminal domain protein BARBAKC583_0874 245 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 121602883 Pathogen - hypothetical protein BARBAKC583_0574 1 None None None 121602052 Common - hypothetical protein BARBAKC583_0470 29 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 121601948 Common radA DNA repair protein RadA BARBAKC583_0489 222 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 121602007 Common - drug resistance transporter, Bcr/CflA subfamily BARBAKC583_0866 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 121602855 Common - outer membrane autotransporter BARBAKC583_1109 32 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121602407 Common - amino acid ABC transporter, permease protein BARBAKC583_0596 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 121602496 Common - putative biotin ABC transporter, permease protein BARBAKC583_1194 64 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 121602498 Common grxC glutaredoxin 3 BARBAKC583_0368 125 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 121602771 Common asd aspartate-semialdehyde dehydrogenase BARBAKC583_1101 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 121602835 Common nusB transcription antitermination protein NusB BARBAKC583_0634 177 COG0781 NusB, Transcription termination factor Transcription 121602644 Common pth peptidyl-tRNA hydrolase BARBAKC583_1000 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 121602138 Common mutM formamidopyrimidine-DNA glycosylase BARBAKC583_1221 180 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 121602242 Common - putative adhesin/invasin BARBAKC583_0513 22 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121601827 Common flgE flagellar hook protein FlgE BARBAKC583_1122 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 121602728 Common - hypothetical protein BARBAKC583_0593 45 COG3494 COG3494, Uncharacterized protein conserved in bacteria Function unknown 121602545 Common - F0F1 ATP synthase subunit B' BARBAKC583_0378 57 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 121601687 Common rplA 50S ribosomal protein L1 BARBAKC583_0568 239 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 121602867 Pathogen - hypothetical protein BARBAKC583_0997 1 None None None 121602848 Common acpP acyl carrier protein BARBAKC583_0498 208 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 121602275 Common - hypothetical protein BARBAKC583_1340 44 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 121602263 Common secE preprotein translocase subunit SecE BARBAKC583_0565 40 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 121601742 Common rbfA ribosome-binding factor A BARBAKC583_1255 85 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 121602658 Common - putative translaldolase BARBAKC583_0106 155 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 121601749 Common cyoB cytochrome o ubiquinol oxidase, subunit I BARBAKC583_1274 169 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 121602874 Pathogen - hypothetical protein BARBAKC583_0044 1 None None None 121602060 Common - hypothetical protein BARBAKC583_0266 30 COG4680 COG4680, Uncharacterized protein conserved in bacteria Function unknown 121602003 Common xth2 exodeoxyribonuclease III BARBAKC583_0660 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 121601797 Common trmD tRNA (guanine-N1)-methyltransferase BARBAKC583_0086 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 121602273 Common - DNA-binding protein BARBAKC583_1248 48 COG1396 HipB, Predicted transcriptional regulators Transcription 121602045 Common rpsJ2 ribosomal protein S10 BARBAKC583_0697 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 121602011 Common rpsD 30S ribosomal protein S4 BARBAKC583_0826 217 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 121602126 Pathogen - hypothetical protein BARBAKC583_0881 1 None None None 121601816 Common - protease Do family protein BARBAKC583_0434 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 121602681 Pathogen - hypothetical protein BARBAKC583_0680 1 None None None 121602041 Common - cytochrome c family protein BARBAKC583_1235 57 COG3474 COG3474, Cytochrome c2 Energy production and conversion 121602444 Common - bacterial transferase hexapeptide repeat protein BARBAKC583_0933 180 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 121602207 Common mutL DNA mismatch repair protein BARBAKC583_1201 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 121602427 Common - hypothetical protein BARBAKC583_1138 11 COG3334 COG3334, Uncharacterized conserved protein Function unknown 121602016 Common lys1 saccharopine dehydrogenase BARBAKC583_0028 51 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 121601994 Common - methyltransferase, HemK family BARBAKC583_0357 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 121602403 Common - tetratricopeptide repeat protein BARBAKC583_0382 129 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 121601926 Common - carbonic anhydrase BARBAKC583_0067 149 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 121601973 Pathogen - hypothetical protein BARBAKC583_1150 3 None None None 121601911 Pathogen - hypothetical protein BARBAKC583_1232 1 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 121602618 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase BARBAKC583_0121 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 121602213 Common pdhA pyruvate dehydrogenase E1 component, alpha subunit BARBAKC583_0534 160 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 121601686 Common - FeS assembly SUF system protein BARBAKC583_0814 144 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 121602076 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase BARBAKC583_1323 139 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 121601702 Common pyrD dihydroorotate dehydrogenase 2 BARBAKC583_0293 224 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 121602791 Common nspC carboxynorspermidine decarboxylase BARBAKC583_0029 61 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 121601958 Common rpsO ribosomal protein S15 BARBAKC583_1257 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 121601787 Pathogen - hypothetical protein BARBAKC583_0562 1 None None None 121602391 Common phaAB putative monovalent cation/H+ antiporter subunit A BARBAKC583_0030 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 121601894 Common - hypothetical protein BARBAKC583_0501 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 121601709 Common coaD phosphopantetheine adenylyltransferase BARBAKC583_0738 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 121601934 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type BARBAKC583_0740 197 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 121602238 Common carB carbamoyl phosphate synthase large subunit BARBAKC583_0975 232 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 121602325 Common thyA thymidylate synthase BARBAKC583_0926 145 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 121602876 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein BARBAKC583_0363 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 121602390 Common sufS cysteine desulfurase SufS BARBAKC583_0813 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 121601856 Common - outer membrane autotransporter BARBAKC583_1133 4 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121602578 Common - lipid A biosynthesis lauroyl acyltransferase BARBAKC583_0617 95 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 121602785 Common pstB phosphate ABC transporter, ATP-binding protein BARBAKC583_1225 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 121602542 Common rpe ribulose-phosphate 3-epimerase BARBAKC583_0856 215 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 121602530 Common cycY thiol:disulfide interchange protein CycY BARBAKC583_1288 151 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 121601838 Common maf1 septum formation protein Maf BARBAKC583_0007 184 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 121602751 Pathogen - hypothetical protein BARBAKC583_0229 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 121601801 Common - putative UDP-N-acetylglucosamine pyrophosphorylase BARBAKC583_0754 236 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 121602418 Common - DSBA-like thioredoxin domain protein BARBAKC583_0417 87 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 121602472 Common gltA type II citrate synthase BARBAKC583_0599 194 COG0372 GltA, Citrate synthase Energy production and conversion 121602116 Common - conserved hypothetical protein TIGR00726 BARBAKC583_0996 181 COG1496 COG1496, Uncharacterized conserved protein Function unknown 121601902 Common - hypothetical protein BARBAKC583_1251 155 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 121602758 Common - hypothetical protein BARBAKC583_1020 30 COG5385 COG5385, Uncharacterized protein conserved in bacteria Function unknown 121602035 Common - dihydroorotase BARBAKC583_0480 210 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 121602500 Common lon ATP-dependent protease La BARBAKC583_0548 216 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 121602334 Common rnr ribonuclease R BARBAKC583_0844 192 COG0557 VacB, Exoribonuclease R Transcription 121602898 Common tuf3 elongation factor Tu BARBAKC583_0696 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 121601671 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase BARBAKC583_0945 165 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 121602388 Common - biotin-[acetyl-CoA-carboxylase] ligase BARBAKC583_0792 222 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 121602719 Common nrdE ribonucleotide-diphosphate reductase subunit alpha BARBAKC583_0356 217 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 121602301 Common - PhoH family protein BARBAKC583_1244 198 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 121602491 Common - surface antigen/outer membrane protein, OMP85 family BARBAKC583_0589 162 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 121602769 Common gltI2 glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein BARBAKC583_0691 129 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 121602147 Common atpH ATP synthase F1, delta subunit BARBAKC583_0111 174 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 121602151 Common dnaG DNA primase BARBAKC583_0967 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 121602571 Common - N-acetylmuramoyl-l-alanine amidase family protein BARBAKC583_0802 178 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 121601644 Common pyrH uridylate kinase BARBAKC583_0585 241 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 121602508 Common - putative inner membrane protein translocase component YidC BARBAKC583_1048 212 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 121602640 Common pnp polynucleotide phosphorylase/polyadenylase BARBAKC583_1258 238 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 121602143 Common - thiamine-phosphate pyrophosphorylase BARBAKC583_0155 32 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 121602837 Pathogen - hypothetical protein BARBAKC583_0450 1 None None None 121602290 Common - D-alanyl-D-alanine carboxypeptidase BARBAKC583_0577 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 121602897 Common - oxidoreductase, Gfo/Idh/MocA family BARBAKC583_1024 184 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 121602413 Common rpsR 30S ribosomal protein S18 BARBAKC583_0493 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 121602110 Pathogen - hypothetical protein BARBAKC583_0281 1 None None None 121601930 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase BARBAKC583_0952 214 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 121601857 Common rplT 50S ribosomal protein L20 BARBAKC583_1314 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 121602000 Pathogen - hypothetical protein BARBAKC583_1074 1 None None None 121602868 Common cmk cytidylate kinase BARBAKC583_1304 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 121602130 Common ccmA heme ABC exporter, ATP-binding protein CcmA BARBAKC583_1284 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 121602160 Common uvrA excinuclease ABC subunit A BARBAKC583_0735 244 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 121602318 Common - hypothetical protein BARBAKC583_0153 15 COG5317 COG5317, Uncharacterized protein conserved in bacteria Function unknown 121602729 Common sodB superoxide dismutase BARBAKC583_0420 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 121601732 Common folD folD bifunctional protein BARBAKC583_0297 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 121602340 Common prfC peptide chain release factor 3 BARBAKC583_1359 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 121601743 Common - amino acid ABC transporter, permease protein BARBAKC583_0597 173 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 121602637 Pathogen - hypothetical protein BARBAKC583_0732 2 None None None 121602705 Common rplW 50S ribosomal protein L23 BARBAKC583_0700 224 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 121601663 Common coaA pantothenate kinase BARBAKC583_1263 78 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 121601951 Common secB preprotein translocase subunit SecB BARBAKC583_1296 108 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 121602505 Common - RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family BARBAKC583_0306 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 121602004 Common galU UTP-glucose-1-phosphate uridylyltransferase BARBAKC583_0334 230 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 121602904 Common lipB lipoyltransferase BARBAKC583_0898 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 121602567 Pathogen - hypothetical protein BARBAKC583_0992 1 None None None 121601961 Common lspA signal peptidase II BARBAKC583_1375 173 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 121602280 Common - hypothetical protein BARBAKC583_0164 41 COG3820 COG3820, Uncharacterized protein conserved in bacteria Function unknown 121602243 Pathogen - hypothetical protein BARBAKC583_1187 1 None None None 121601775 Common aroC chorismate synthase BARBAKC583_0397 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 121602063 Common ubiA prenyltransferase BARBAKC583_0393 191 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 121602739 Common rpmD 50S ribosomal protein L30 BARBAKC583_0716 38 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 121602672 Common maf2 septum formation protein Maf BARBAKC583_0212 196 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 121602419 Pathogen - hypothetical protein BARBAKC583_0889 1 None None None 121602090 Common ribD riboflavin biosynthesis protein RibD BARBAKC583_0631 224 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 121602842 Common - hypothetical protein BARBAKC583_0163 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 121601791 Common tuf2 elongation factor Tu BARBAKC583_0664 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 121601770 Common pstC phosphate ABC transporter, permease protein PstC BARBAKC583_1227 231 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 121601759 Common dnaJ chaperone protein DnaJ BARBAKC583_1327 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 121602226 Common - hypothetical protein BARBAKC583_1099 18 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 121602235 Pathogen secG preprotein translocase subunit SecG BARBAKC583_0529 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 121601851 Pathogen - putative lipoprotein BARBAKC583_0055 1 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 121601750 Common nth endonuclease III BARBAKC583_1316 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 121601989 Common cvpA2 CvpA protein BARBAKC583_0487 44 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 121602854 Common - hypothetical protein BARBAKC583_0372 5 None None None 121602071 Common rplN 50S ribosomal protein L14 BARBAKC583_0676 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 121602859 Common - hypothetical protein BARBAKC583_1155 11 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 121602329 Common - hypothetical protein BARBAKC583_0808 86 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 121602836 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BARBAKC583_0515 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 121602744 Common parB chromosome partitioning protein ParB BARBAKC583_0014 187 COG1475 Spo0J, Predicted transcriptional regulators Transcription 121602820 Common - hypothetical protein BARBAKC583_0427 4 None None None 121601881 Common murC UDP-N-acetylmuramate--L-alanine ligase BARBAKC583_0946 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 121601862 Common - ABC transporter, ATP-binding protein BARBAKC583_0049 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 121602452 Common ftsW cell division protein FtsW BARBAKC583_0948 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 121602269 Common - yggt family protein BARBAKC583_0327 74 None None None 121601672 Common - hydrolase, Alpha/Beta family BARBAKC583_0858 56 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 121602599 Pathogen - hypothetical protein BARBAKC583_0875 2 None None None 121601668 Pathogen - hypothetical protein BARBAKC583_0522 1 None None None 121601866 Common - cyclic beta 1-2 glucan synthase BARBAKC583_1306 46 COG3459 COG3459, Cellobiose phosphorylase Carbohydrate transport and metabolism 121602477 Common trmB tRNA (guanine-N(7))-methyltransferase BARBAKC583_1250 165 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 121601885 Common - pyrroline-5-carboxylate reductase BARBAKC583_1041 61 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 121602088 Common - OstA family protein BARBAKC583_1369 33 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 121602810 Common sufB cysteine desulfurase activator complex subunit SufB BARBAKC583_0810 184 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 121602366 Pathogen - hypothetical protein BARBAKC583_0243 1 None None None 121602699 Common rpsN 30S ribosomal protein S14 BARBAKC583_0711 205 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 121602024 Common - hypothetical protein BARBAKC583_0879 57 COG0392 COG0392, Predicted integral membrane protein Function unknown 121602272 Common plsX fatty acid/phospholipid synthesis protein BARBAKC583_0637 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 121602558 Common - hypothetical protein BARBAKC583_0849 56 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 121602786 Common - Smr domain protein BARBAKC583_1293 80 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 121602320 Pathogen - hypothetical protein BARBAKC583_0109 1 None None None 121602688 Common - P-loop hydrolase/phosphotransferase BARBAKC583_1355 200 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 121602357 Common - putative protease do BARBAKC583_0724 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 121602617 Common - hypothetical protein BARBAKC583_0130 38 COG3750 COG3750, Uncharacterized protein conserved in bacteria Function unknown 121601978 Common pyrB aspartate carbamoyltransferase catalytic subunit BARBAKC583_0839 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 121601980 Pathogen - hypothetical protein BARBAKC583_0893 1 None None None 121601919 Common - hypothetical protein BARBAKC583_0391 7 None None None 121602515 Common rplO 50S ribosomal protein L15 BARBAKC583_0717 203 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 121602521 Common - hypothetical protein BARBAKC583_0492 7 None None None 121602529 Pathogen - hypothetical protein BARBAKC583_0886 1 None None None 121602790 Pathogen - hypothetical protein BARBAKC583_0206 1 None None None 121602804 Pathogen - hypothetical protein BARBAKC583_1271 1 None None None 121602262 Common - hypothetical protein BARBAKC583_0991 34 COG5465 COG5465, Uncharacterized conserved protein Function unknown 121602826 Common - deoxyuridine 5'-triphosphate nucleotidohydrolase BARBAKC583_0178 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 121602492 Common - hypothetical protein BARBAKC583_0247 31 None None None 121601658 Common - thioredoxin family protein BARBAKC583_0805 212 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 121601969 Common - hypothetical protein BARBAKC583_1010 32 COG5426 COG5426, Uncharacterized membrane protein Function unknown 121602692 Common dnaK chaperone protein DnaK BARBAKC583_1328 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 121601762 Common - RNA methyltransferase, TrmH family BARBAKC583_1015 210 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 121601803 Common cobT cobaltochelatase, CobT subunit BARBAKC583_0079 43 COG4547 CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) Coenzyme metabolism 121602430 Common rpsQ 30S ribosomal protein S17 BARBAKC583_0707 224 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 121602068 Common rplD 50S ribosomal protein L4 BARBAKC583_0667 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 121601815 Pathogen - hypothetical protein BARBAKC583_0887 1 None None None 121602335 Common - hypothetical protein BARBAKC583_0752 13 None None None 121602863 Pathogen - hypothetical protein BARBAKC583_1022 1 None None None 121602349 Common - putative lipoprotein BARBAKC583_0041 44 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 121602358 Common map methionine aminopeptidase BARBAKC583_0829 246 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 121602458 Common lysA diaminopimelate decarboxylase BARBAKC583_0056 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 121602460 Common thiC thiamine biosynthesis protein ThiC BARBAKC583_0446 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 121602679 Pathogen - hypothetical protein BARBAKC583_0143 1 None None None 121602402 Common mutT mutator mutT protein BARBAKC583_0364 163 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 121601788 Common ntrY nitrogen regulation protein NtrY BARBAKC583_0542 217 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 121602577 Pathogen - hypothetical protein BARBAKC583_0237 1 None None None 121601848 Common - transporter, small conductance mechanosensitive ion channel (MscS) family BARBAKC583_0968 102 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 121602466 Pathogen - hypothetical protein BARBAKC583_0915 1 None None None 121602180 Common - dipeptide ABC transporter, ATP-binding protein BARBAKC583_1026 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 121602368 Common fliQ flagellar biosynthesis protein FliQ BARBAKC583_1116 125 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 121601876 Common - FAD-binding protein BARBAKC583_0390 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 121602849 Pathogen - hypothetical protein BARBAKC583_1283 1 None None None 121602738 Common valS valyl-tRNA synthetase BARBAKC583_0654 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121602175 Common - hypothetical protein BARBAKC583_1128 5 None None None 121602412 Common - putative addiction module killer protein BARBAKC583_0277 40 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 121602274 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B BARBAKC583_0554 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 121602890 Pathogen - hypothetical protein BARBAKC583_0217 1 None None None 121602670 Common - putative macrolide-specific efflux protein MacA BARBAKC583_0096 164 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 121601899 Common gatC glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit BARBAKC583_0836 147 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 121602664 Common engD translation-associated GTPase BARBAKC583_1002 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 121602792 Pathogen - hypothetical protein BARBAKC583_0976 1 None None None 121602780 Common - hypothetical protein BARBAKC583_0183 50 COG1238 COG1238, Predicted membrane protein Function unknown 121601699 Common rpoD RNA polymerase sigma factor RpoD BARBAKC583_0966 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 121601855 Pathogen - hypothetical protein BARBAKC583_0157 1 None None None 121602010 Common rpmJ 50S ribosomal protein L36 BARBAKC583_0205 68 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 121602044 Common - ErfK/YbiS/YcfS/YnhG family protein BARBAKC583_1001 77 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 121601798 Common acnA aconitate hydratase BARBAKC583_1282 223 COG1048 AcnA, Aconitase A Energy production and conversion 121602656 Common flgI flagellar basal body P-ring protein BARBAKC583_1139 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 121602445 Common nuoA NADH dehydrogenase subunit A BARBAKC583_0778 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 121602574 Common murI glutamate racemase BARBAKC583_0827 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 121602522 Common grpE co-chaperone GrpE BARBAKC583_1334 232 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 121602111 Common xth1 exodeoxyribonuclease III BARBAKC583_0095 190 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 121602619 Common - hypothetical protein BARBAKC583_0275 13 COG5611 COG5611, Predicted nucleic-acid-binding protein, contains PIN domain General function prediction only 121601812 Common thrS threonyl-tRNA synthetase BARBAKC583_0641 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121601795 Common - hypothetical protein BARBAKC583_1008 52 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 121602811 Common sdhD succinate dehydrogenase, hydrophobic membrane anchor protein BARBAKC583_0089 35 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 121602155 Common phaF putative monovalent cation/H+ antiporter subunit F BARBAKC583_0034 42 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 121602818 Pathogen - hypothetical protein BARBAKC583_1177 1 None None None 121602027 Common prfA peptide chain release factor 1 BARBAKC583_0359 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 121601703 Common - putative transcriptional regulator BARBAKC583_1087 85 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 121601927 Pathogen - hypothetical protein BARBAKC583_0199 1 None None None 121601931 Common - methyltransferase domain protein BARBAKC583_0384 48 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 121602490 Common - peptidyl-prolyl cis-trans isomerase B BARBAKC583_0739 198 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 121602225 Common hisS histidyl-tRNA synthetase BARBAKC583_1178 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 121601645 Pathogen - hypothetical protein BARBAKC583_1217 3 None None None 121602582 Common - dipeptide ABC transporter, permease protein BARBAKC583_1029 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 121602392 Common - putative tonB-system energizer ExbB BARBAKC583_0173 139 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 121602148 Pathogen - hypothetical protein BARBAKC583_0103 1 None None None 121602759 Pathogen - hypothetical protein BARBAKC583_0234 1 None None None 121602152 Pathogen - hypothetical protein BARBAKC583_0807 1 None None None 121601734 Common ilvC ketol-acid reductoisomerase BARBAKC583_0917 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 121602144 Common - rare lipoprotein A BARBAKC583_0823 132 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 121601837 Common - tRNA modification enzyme, MiaB family BARBAKC583_0018 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 121602206 Common ftsA cell division protein FtsA BARBAKC583_0942 184 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 121602190 Common rpsK 30S ribosomal protein S11 BARBAKC583_0721 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 121602283 Common ccmB heme exporter protein CcmB BARBAKC583_1285 81 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 121601852 Common purS phosphoribosylformylglycinamidine synthase, PurS protein BARBAKC583_0860 116 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 121602426 Common - auxiliary transport protein, membrane fusion protein (MFP) family BARBAKC583_1088 153 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 121602687 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein BARBAKC583_0750 162 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 121602877 Pathogen - hypothetical protein BARBAKC583_0907 1 None None None 121601710 Common pssA CDP-diacylglycerol--serine O-phosphatidyltransferase BARBAKC583_0484 151 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 121602326 Common - GcrA cell cycle regulator BARBAKC583_1289 33 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 121602092 Pathogen - hypothetical protein BARBAKC583_1189 1 None None None 121602471 Common - hypothetical protein BARBAKC583_0251 4 None None None 121602624 Common proB gamma-glutamyl kinase BARBAKC583_0318 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 121601903 Common hmuT hemin ABC transporter, periplasmic hemin-binding protein BARBAKC583_0457 113 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 121602117 Common eno phosphopyruvate hydratase BARBAKC583_0532 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 121602302 Common nuoC NADH dehydrogenase subunit C BARBAKC583_0780 177 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 121602564 Common rho transcription termination factor Rho BARBAKC583_0009 211 COG1158 Rho, Transcription termination factor Transcription 121601773 Pathogen - hypothetical protein BARBAKC583_0725 1 None None None 121602421 Common rpsG2 30S ribosomal protein S7 BARBAKC583_0694 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 121602036 Common - hypothetical protein BARBAKC583_0257 8 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 121602476 Common - pseudouridine synthase, RluA family BARBAKC583_0730 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 121602387 Common rpmC1 50S ribosomal protein L29 BARBAKC583_0674 166 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 121601776 Common - hypothetical protein BARBAKC583_0136 12 None None None 121602093 Pathogen - hypothetical protein BARBAKC583_0152 1 None None None 121602062 Common - putative lipoprotein BARBAKC583_0939 128 COG4105 ComL, DNA uptake lipoprotein General function prediction only 121602884 Pathogen - hypothetical protein BARBAKC583_0110 1 None None None 121602109 Common - invasion associated locus B family protein BARBAKC583_0315 4 None None None 121602470 Common - glycoprotease family protein BARBAKC583_1241 176 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 121601792 Common polA DNA polymerase I BARBAKC583_0002 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 121602291 Common - hypothetical protein BARBAKC583_1154 9 None None None 121602540 Common holB DNA polymerase III subunit delta' BARBAKC583_0821 240 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 121602209 Common rnhA ribonuclease HI BARBAKC583_0409 175 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 121601968 Common ppdK pyruvate phosphate dikinase BARBAKC583_0418 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 121601870 Common - hydrolase, TatD family BARBAKC583_0819 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 121601681 Common atpC ATP synthase F1, epsilon subunit BARBAKC583_0115 130 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 121602098 Common - DNA-binding response regulator BARBAKC583_0059 208 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 121602610 Common - hypothetical protein BARBAKC583_0180 23 COG1633 COG1633, Uncharacterized conserved protein Function unknown 121602555 Common ribBA riboflavin biosynthesis protein RibBA BARBAKC583_0398 227 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 121602743 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase BARBAKC583_0074 218 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 121602312 Common afeB iron chelate ABC transporter, ATP-binding protein BARBAKC583_1310 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 121602763 Common - flavin reductase family protein BARBAKC583_0855 107 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 121602431 Common - dipeptide ABC transporter, ATP-binding protein BARBAKC583_1027 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 121601990 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase BARBAKC583_0859 179 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 121602752 Common - hypothetical protein BARBAKC583_0894 4 None None None 121602609 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein BARBAKC583_0344 241 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 121602568 Common rpiA ribose-5-phosphate isomerase A BARBAKC583_0602 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 121602706 Pathogen - hypothetical protein BARBAKC583_0223 1 None None None 121602317 Common - hypothetical protein BARBAKC583_0375 8 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 121601829 Common - hypothetical protein BARBAKC583_1253 37 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 121602918 Common hslO Hsp33-like chaperonin BARBAKC583_1292 129 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 121602869 Common guaB inositol-5-monophosphate dehydrogenase BARBAKC583_0341 242 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 121601891 Common - M23 peptidase domain protein BARBAKC583_0323 109 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 121602600 Common fliL flagellar basal body-associated protein FliL BARBAKC583_1136 11 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 121601873 Common - ABC transporter, permease protein BARBAKC583_0351 158 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 121601733 Pathogen - hypothetical protein BARBAKC583_1197 1 None None None 121602350 Pathogen - hypothetical protein BARBAKC583_0279 1 None None None 121602638 Pathogen - hypothetical protein BARBAKC583_1062 1 None None None 121601744 Common phaE putative monovalent cation/H+ antiporter subunit E BARBAKC583_0033 43 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 121601662 Common - malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) BARBAKC583_1298 201 COG0281 SfcA, Malic enzyme Energy production and conversion 121602244 Pathogen - putative lipoprotein BARBAKC583_0129 3 None None None 121602773 Common trxB thioredoxin-disulfide reductase BARBAKC583_0981 245 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 121602005 Common pheP phenylalanine-specific permease PheP BARBAKC583_1192 160 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 121602001 Common glnA glutamine synthetase, type I BARBAKC583_0733 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 121601960 Common flgB flagellar basal body rod protein FlgB BARBAKC583_1144 33 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 121602230 Pathogen - hypothetical protein BARBAKC583_0246 1 None None None 121602170 Pathogen - hypothetical protein BARBAKC583_1061 1 None None None 121602698 Common - PP-loop family protein BARBAKC583_0825 144 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 121601657 Common rplI ribosomal protein L9 BARBAKC583_0491 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 121602237 Common bvrS sensor histidine kinase BvrS BARBAKC583_1333 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 121601918 Common - putative cytochrome c-type biogenesis protein BARBAKC583_0753 89 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 121602691 Pathogen - hypothetical protein BARBAKC583_1171 1 None None None 121601928 Common - NifU family protein BARBAKC583_1170 105 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 121602365 Common - HAD-superfamily hydrolase, subfamily IIA BARBAKC583_1165 53 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 121602438 Common - hypothetical protein BARBAKC583_1206 24 None None None 121602678 Common - phosphoglucomutase BARBAKC583_1175 191 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 121602913 Common tkt transketolase BARBAKC583_0137 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 121602805 Pathogen - hypothetical protein BARBAKC583_1004 1 None None None 121602485 Common flgC flagellar basal body rod protein FlgC BARBAKC583_1143 124 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 121602680 Pathogen - hypothetical protein BARBAKC583_0452 3 None None None 121602255 Common uvrC excinuclease ABC subunit C BARBAKC583_0516 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 121602828 Pathogen - hypothetical protein BARBAKC583_0963 3 COG3422 COG3422, Uncharacterized conserved protein Function unknown 121602862 Common nudH dinucleoside polyphosphate hydrolase BARBAKC583_0325 115 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 121602561 Common - iron chelate ABC transporter, periplasmic iron-binding protein BARBAKC583_1111 68 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 121601972 Common rplB 50S ribosomal protein L2 BARBAKC583_0701 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 121601988 Common - hypothetical protein BARBAKC583_1021 22 COG5400 COG5400, Uncharacterized protein conserved in bacteria Function unknown 121602338 Common tgt queuine tRNA-ribosyltransferase BARBAKC583_0741 226 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 121602120 Common gid tRNA (uracil-5-)-methyltransferase Gid BARBAKC583_0551 174 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 121601800 Common - DNA-binding protein BARBAKC583_0962 3 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 121601723 Pathogen - hypothetical protein BARBAKC583_0883 1 None None None 121602268 Common tmk thymidylate kinase BARBAKC583_0822 228 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 121602127 Common kgtP alpha-ketoglutarate permease BARBAKC583_0927 138 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 121601847 Common - hypothetical protein BARBAKC583_1205 41 COG2121 COG2121, Uncharacterized protein conserved in bacteria Function unknown 121602827 Common - NADH dehydrogenase BARBAKC583_0555 38 COG3761 COG3761, NADH:ubiquinone oxidoreductase 17.2 kD subunit Energy production and conversion 121602821 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase BARBAKC583_0940 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 121602453 Common etfB electron transfer flavoprotein, beta subunit BARBAKC583_1037 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 121601648 Common - competence protein BARBAKC583_0601 164 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 121602671 Common glmM phosphoglucosamine mutase BARBAKC583_0171 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 121601716 Common - hypothetical protein BARBAKC583_1220 166 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 121602040 Common - peptidoglycan binding domain protein BARBAKC583_0426 4 None None None 121602442 Pathogen - hypothetical protein BARBAKC583_1183 3 None None None 121601886 Pathogen - hypothetical protein BARBAKC583_0500 1 None None None 121602086 Common pepN aminopeptidase N BARBAKC583_0439 161 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 121602648 Common gltK2 glutamate/aspartate ABC transporter, permease protein GltK BARBAKC583_0689 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 121602089 Common folC folylpolyglutamate synthase BARBAKC583_1352 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 121602509 Common thiE thiamine-phosphate pyrophosphorylase BARBAKC583_0442 145 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 121601698 Common topA DNA topoisomerase I BARBAKC583_0843 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 121601673 Common mgtE magnesium transporter BARBAKC583_0331 170 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 121601861 Common - glycerophosphoryl diester phosphodiesterase family protein BARBAKC583_0345 125 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 121601882 Common acsA acetyl-CoA synthetase BARBAKC583_0101 214 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 121601639 Common - YihY family protein BARBAKC583_0051 63 COG1295 Rbn, Predicted membrane protein Function unknown 121601865 Common - peptidase, S54 family BARBAKC583_0559 58 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 121602550 Common panC pantoate--beta-alanine ligase BARBAKC583_0476 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism