Psychromonas ingrahamii 37, complete genome NC_008709 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 119945713 Common - TRAP dicarboxylate transporter, DctM subunit Ping_2033 131 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119946849 Common - carbohydrate kinase, YjeF related protein Ping_3243 222 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 119944603 Common - FxsA cytoplasmic membrane protein Ping_0841 59 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 119946364 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_2736 192 COG0583 LysR, Transcriptional regulator Transcription 119946827 Common - acetyltransferase, GNAT family protein Ping_3221 3 None None None 119947326 Common - ATP synthase F1, delta subunit Ping_3733 168 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 119944289 Common - putative heat shock protein 70 family protein Ping_0515 193 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 119946518 Common - phosphocarrier protein NPr of HPr family protein Ping_2895 128 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 119946842 Common - HflK protein Ping_3236 199 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 119943795 Common - putative transposase Ping_0001 30 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944794 Common - transcriptional regulator of LysR family protein Ping_1036 93 COG0583 LysR, Transcriptional regulator Transcription 119944253 Common - prepilin-type cleavage/methylation Ping_0477 4 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 119944570 Common - transcription elongation factor GreA Ping_0808 204 COG0782 GreA, Transcription elongation factor Transcription 119945743 Common - Substrate-binding region of ABC-type glycine betaine transport system Ping_2073 60 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 119946205 Nonpathogen - hypothetical protein Ping_2565 1 None None None 119944062 Common - ethanolamine ammonia-lyase small subunit Ping_0277 54 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 119943968 Common - hypothetical protein DUF47 Ping_0181 38 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 119946282 Common - hypothetical transmembrane protein DUF6 Ping_2647 84 COG2962 RarD, Predicted permeases General function prediction only 119945134 Common - CRISPR-associated protein, Csy1 family protein Ping_1397 18 None None None 119944546 Nonpathogen - cytidylyltransferase family protein Ping_0782 1 None None None 119947262 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_3660 178 COG0583 LysR, Transcriptional regulator Transcription 119944249 Common - acriflavin resistance protein Ping_0473 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 119945194 Common - exodeoxyribonuclease V, gamma subunit Ping_1458 71 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 119946914 Common pflA pyruvate formate lyase-activating enzyme 1 Ping_3308 99 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 119947238 Common - glyceraldehyde-3-phosphate dehydrogenase Ping_3636 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 119945793 Common - Endoribonuclease L-PSP Ping_2129 158 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 119945698 Common - UDP-glucose 4-epimerase Ping_2015 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 119946460 Common - GPR1/FUN34/yaaH family protein Ping_2835 49 COG1584 COG1584, Predicted membrane protein Function unknown 119946921 Common - alcohol dehydrogenase and acetaldehyde dehydrogenase, iron-containing Ping_3315 222 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 119946125 Common - ADP-ribosylation/Crystallin J1 Ping_2477 65 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 119946268 Common - lipase-like protein Ping_2631 6 None None None 119945043 Common - basic membrane lipoprotein Ping_1297 104 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 119946444 Common - ABC polar amino acid transporter inner membrane protein Ping_2819 172 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119945756 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_2088 192 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946550 Common - transcriptional regulator, periplasmic binding protein of LacI family protein Ping_2929 128 COG1609 PurR, Transcriptional regulators Transcription 119946576 Common frsA fermentation/respiration switch protein Ping_2955 32 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 119946389 Common - MscS Mechanosensitive ion channel Ping_2763 65 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119946369 Common - transcriptional regulator, GntR family protein Ping_2743 95 COG2188 PhnF, Transcriptional regulators Transcription 119944753 Common - RNA polymerase sigma factor Ping_0995 114 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 119946931 Common - Prepilin peptidase Ping_3325 127 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 119945084 Common - copper-translocating P-type ATPase Ping_1340 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 119946963 Common - cyclic AMP phosphodiesterase Ping_3358 95 COG1409 Icc, Predicted phosphohydrolases General function prediction only 119945216 Common - pyridoxamine 5'-phosphate oxidase Ping_1481 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 119946780 Common - ABC transporter ATP-binding protein Ping_3173 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119944308 Common - tRNA-i(6)A37 thiotransferase enzyme MiaB Ping_0535 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 119947217 Common - glutamine amidotransferase of anthranilate synthase Ping_3615 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 119946499 Common - ribosomal protein S9 Ping_2876 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 119943907 Common - SNF2-related protein Ping_0114 137 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 119945880 Common - YebG family protein Ping_2220 19 COG3141 COG3141, Uncharacterized protein conserved in bacteria Function unknown 119944985 Common - hypothetical transmembrane protein DUF6 Ping_1236 40 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 119946725 Common - Transposon Tn7 transposition protein A Ping_3109 15 None None None 119946184 Common - Methyltransferase type 12 Ping_2544 77 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 119946691 Common - transcriptional regulator, TraR/DksA family protein Ping_3073 22 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 119945185 Common - regulatory protein for cyclic-di-GMP, EAL domain Ping_1449 144 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119947223 Common - predicted uridine kinase Ping_3621 5 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 119944136 Common - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase Ping_0352 92 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 119945514 Nonpathogen - hypothetical protein Ping_1818 1 COG5033 TFG3, Transcription initiation factor IIF, auxiliary subunit Transcription 119946607 Common - ABC transporter for branched chain amino acids substrate binding protein Ping_2986 99 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 119945518 Common - alpha/beta hydrolase fold Ping_1822 49 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119944509 Common - electron transport complex, RnfABCDGE type, A subunit Ping_0738 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 119944186 Common - hypothetical protein Ping_0406 9 None None None 119946850 Common - putative iron-sulfur cluster binding protein Ping_3244 130 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 119943957 Common - cytochrome c, class I Ping_0170 46 COG3245 CycB, Cytochrome c5 Energy production and conversion 119945574 Common - inner membrane protein DUF107 Ping_1879 5 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 119945938 Common - adenine phosphoribosyltransferase Ping_2278 177 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 119945904 Common - hypothetical protein Ping_2244 3 None None None 119947251 Common - hypothetical protein Ping_3649 7 None None None 119944130 Common - transcriptional regulator for D-ribose, periplasmic binding protein, LacI family protein Ping_0345 129 COG1609 PurR, Transcriptional regulators Transcription 119944230 Nonpathogen - hypothetical protein Ping_0453 4 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119945377 Common crcB camphor resistance protein CrcB Ping_1665 189 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 119946705 Common - NADH:flavin oxidoreductase/NADH oxidase Ping_3087 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 119945070 Common - iron-sulfur cluster assembly protein IscA Ping_1326 162 COG0316 IscA, Uncharacterized conserved protein Function unknown 119944624 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferases Ping_0863 120 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 119945727 Common ulaA ascorbate-specific PTS system enzyme IIC Ping_2055 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 119944159 Common - 17 kDa surface antigen Ping_0379 24 COG4520 LipA, Surface antigen Cell envelope biogenesis, outer membrane 119945234 Common - Rieske (2Fe-2S) domain protein Ping_1502 87 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 119946395 Common - ABC transporter permease protein Ping_2769 102 COG4135 COG4135, ABC-type uncharacterized transport system, permease component General function prediction only 119945106 Common - Na+/Ca+ antiporter, CaCA family protein Ping_1366 117 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 119944914 Common - nicotinate-nucleotide pyrophosphorylase Ping_1158 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 119944173 Common - valyl-tRNA synthetase Ping_0393 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119946360 Nonpathogen - hypothetical protein Ping_2731 1 None None None 119947039 Common - phosphoadenosine phosphosulfate reductase Ping_3436 151 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 119947248 Common - hypothetical protein Ping_3646 3 COG3686 COG3686, Predicted membrane protein Function unknown 119944294 Common - putative glutathione S-transferase Ping_0521 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119944618 Common - hypothetical protein Ping_0857 14 COG5453 COG5453, Uncharacterized conserved protein Function unknown 119944959 Common - Enoyl-CoA hydratase/isomerase Ping_1208 129 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 119946221 Common - hypothetical protein Ping_2581 2 None None None 119944402 Common - Heme/copper membrane protein of NnrS family protein Ping_0630 59 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 119944092 Common - glucose sorbosone dehydrogenase Ping_0307 115 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 119945968 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_2308 189 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119945370 Common - hypothetical protein Ping_1658 7 None None None 119946489 Common - thymidine phosphorylase Ping_2865 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 119945981 Common - HPr kinase Ping_2321 4 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 119945622 Nonpathogen - hypothetical protein Ping_1932 2 None None None 119944482 Common - sugar fermentation stimulation protein Ping_0711 106 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 119944523 Common - ApbE family lipoprotein Ping_0752 140 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 119945923 Common - hypothetical protein Ping_2263 22 COG3014 COG3014, Uncharacterized protein conserved in bacteria Function unknown 119945209 Common - Methylenetetrahydrofolate dehydrogenase (NADP(+)) Ping_1473 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 119945887 Common thiI thiamine biosynthesis protein ThiI Ping_2227 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 119944691 Common - universal stress protein UspE Ping_0930 65 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119944038 Common - GCN5-related N-acetyltransferase Ping_0252 3 COG0456 RimI, Acetyltransferases General function prediction only 119945915 Common - succinate dehydrogenase, hydrophobic membrane anchor protein Ping_2255 50 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 119947311 Common - DNA gyrase, B subunit Ping_3717 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 119946793 Common - phospholipid/glycerol acyltransferase Ping_3186 17 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 119945226 Common - hypothetical protein Ping_1492 23 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 119944448 Common - peptidase M23B Ping_0676 187 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 119945481 Nonpathogen - gamma-D-glutamate-meso-diaminopimelate muropeptidase Ping_1782 2 None None None 119944120 Common - ADP-L-glycero-D-manno-heptose-6-epimerase Ping_0335 221 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119947044 Nonpathogen - intracellular sulfur oxidation protein of DsrH family protein Ping_3441 6 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 119946543 Nonpathogen - hypothetical protein Ping_2922 2 COG3431 COG3431, Predicted membrane protein Function unknown 119946996 Common - single-strand binding protein Ping_3391 214 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 119947119 Common rplP 50S ribosomal protein L16 Ping_3517 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 119945636 Common - Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family-like protein Ping_1948 48 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 119946951 Common - Biopolymer transport protein ExbD/TolR Ping_3345 6 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 119947160 Common - Flagellar basal body P-ring biosynthesis protein-like protein Ping_3558 31 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 119946938 Nonpathogen - hypothetical protein Ping_3332 3 None None None 119947176 Common - flagellar basal-body rod protein FlgF Ping_3574 121 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 119946891 Common - D,D-heptose 1,7-bisphosphate phosphatase Ping_3285 132 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 119944244 Common - ATP synthase F0, H+-transporting two-sector ATPase C subunit Ping_0468 38 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 119944279 Common - prolipoprotein diacylglyceryl transferase Ping_0505 210 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 119946874 Common - hydroxymethylbutenyl pyrophosphate reductase Ping_3268 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 119944008 Common - Na+/H+ antiporter NhaA Ping_0222 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 119944701 Common - hypothetical protein Ping_0940 3 None None None 119944652 Common - hypothetical protein Ping_0891 5 None None None 119946452 Common - Succinylglutamate desuccinylase/aspartoacylase Ping_2827 55 COG3608 COG3608, Predicted deacylase General function prediction only 119946816 Common - Rhodanese domain protein Ping_3210 152 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 119945317 Common - phage integrase family protein Ping_1601 108 COG0582 XerC, Integrase DNA replication, recombination, and repair 119944006 Nonpathogen - hypothetical protein Ping_0220 1 None None None 119944031 Common - cell-division initiation protein DivIVA Ping_0245 10 None None None 119945297 Common - ABC-type transporter protein Ping_1579 34 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 119943809 Common - hypothetical protein DUF876 Ping_0015 40 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 119944468 Common - putative methyltransferase Ping_0697 51 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 119945389 Common - ABC-type uncharacterized transport system auxiliary component-like protein Ping_1678 6 COG3218 COG3218, ABC-type uncharacterized transport system, auxiliary component General function prediction only 119946337 Common - hypothetical protein Ping_2708 5 COG0645 COG0645, Predicted kinase General function prediction only 119945874 Common - queuine tRNA-ribosyltransferase Ping_2214 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 119944949 Common - Transglycosylase-associated protein Ping_1197 77 COG2261 COG2261, Predicted membrane protein Function unknown 119945347 Common - HAD-superfamily phosphatase subfamily IIIC:FkbH-like domain Ping_1633 30 COG3882 FkbH, Predicted enzyme involved in methoxymalonyl-ACP biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 119944839 Common - Uncharacterized lipoprotein Ping_1081 19 COG3056 COG3056, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 119945996 Common - cell division protein ZipA Ping_2338 42 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 119946794 Common fre FMN reductase Ping_3187 94 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 119946682 Common - transposase, IS605 OrfB family protein Ping_3063 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946896 Common - alpha/beta hydrolase fold Ping_3290 73 COG2267 PldB, Lysophospholipase Lipid metabolism 119947120 Common - ribosomal protein S3 Ping_3518 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 119944632 Common - Rhodanese domain protein Ping_0871 158 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 119944048 Common - hypothetical protein Ping_0262 50 COG4327 COG4327, Predicted membrane protein Function unknown 119945369 Common hisG ATP phosphoribosyltransferase Ping_1657 211 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 119946468 Common - type I secretion membrane fusion protein, HlyD family protein Ping_2843 132 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 119943833 Common - Diaminopimelate epimerase Ping_0040 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 119944964 Common - hydrogenase nickel insertion protein HypA Ping_1213 77 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 119945401 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein Ping_1691 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 119945032 Common - hypothetical protein DUF179 Ping_1286 130 COG1678 COG1678, Putative transcriptional regulator Transcription 119945816 Common - sensor histidine kinase protein, PAS/GGDEF/EAL domains, cyclic-di-GMP regulation Ping_2154 174 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119945849 Common - peptidase U32 Ping_2189 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 119945039 Common - hypothetical protein DUF1244 Ping_1293 38 COG3492 COG3492, Uncharacterized protein conserved in bacteria Function unknown 119946621 Common - hypothetical protein Ping_3000 5 None None None 119945560 Common - AMP-dependent synthetase and ligase Ping_1865 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 119946345 Common cyoB cytochrome c oxidase, subunit I CyoB Ping_2716 174 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 119945095 Common - monovalent cation/proton antiporter, MnhG/PhaG subunit Ping_1353 79 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 119945787 Common - formate dehydrogenase, subunit FdhD Ping_2123 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 119945944 Common - ABC sugar transporter extracellular solute-binding protein, family 1 Ping_2284 64 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119947137 Common - oxidoreductase domain protein Ping_3535 95 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 119944936 Common - transposase IS3/IS911 family protein Ping_1182 60 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947084 Common rbn ribonuclease BN Ping_3482 140 COG1295 Rbn, Predicted membrane protein Function unknown 119945837 Common moaA molybdenum cofactor biosynthesis protein A Ping_2177 200 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 119946298 Common - oxidoreductase domain protein Ping_2666 166 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 119944197 Common - Amidase Ping_0417 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 119945340 Common - putative ATPase Ping_1624 228 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 119945933 Common - diguanylate cyclase Ping_2273 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119947241 Common - HemY domain protein Ping_3639 39 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 119944494 Common - 4-hydroxybenzoyl-CoA thioesterase Ping_0723 125 COG0824 FcbC, Predicted thioesterase General function prediction only 119947094 Common - ATP-dependent DNA helicase RecG Ping_3492 229 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 119943860 Common - sigma E regulatory protein, MucB/RseB Ping_0067 46 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 119945026 Nonpathogen - hypothetical protein Ping_1280 1 None None None 119946159 Nonpathogen - hypothetical protein Ping_2519 2 None None None 119946986 Common recA recombination protein RecA Ping_3381 220 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 119945866 Common - HAD-superfamily hydrolase, subfamily IA, variant 3 Ping_2206 181 COG0546 Gph, Predicted phosphatases General function prediction only 119946497 Common - fused ubiquinol-cytochrome c reductase and cytochrome b/b6 Ping_2873 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 119945565 Common - transcriptional regulator (GntR family) with HTH domain Ping_1870 142 COG1802 GntR, Transcriptional regulators Transcription 119945503 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_1807 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119946776 Common - ABC sugar (glycerol) transporter extracellular solute-binding protein, family 1 Ping_3169 39 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119944954 Common - sensor histidine kinase, PAS domain Ping_1203 186 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119945153 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ping_1417 177 COG0388 COG0388, Predicted amidohydrolase General function prediction only 119946434 Common - ABC transporter ATP-binding protein Ping_2808 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 119944052 Common - predicted outer membrane protein Ping_0266 6 None None None 119946427 Common - transcriptional regulator, substrate-binding, LysR family protein Ping_2801 193 COG0583 LysR, Transcriptional regulator Transcription 119945303 Common - hypothetical protein Ping_1586 88 COG1203 COG1203, Predicted helicases General function prediction only 119946341 Common - transmembrane cytochrome oxidase associated protein Ping_2712 5 None None None 119943975 Common - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Ping_0188 94 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 119944896 Common - cell division protein FtsL Ping_1140 26 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 119946277 Common - phage Tail Collar domain protein Ping_2641 36 COG4675 MdpB, Microcystin-dependent protein Function unknown 119945077 Common - Lysine exporter protein (LYSE/YGGA) Ping_1333 119 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 119946745 Common - hypothetical transmembrane protein DUF6 Ping_3134 23 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 119945310 Common - hypothetical protein Ping_1593 31 None None None 119946948 Common fecD iron(III) dicitrate transport system permease protein FecD Ping_3342 187 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 119944659 Common - hypothetical protein Ping_0898 47 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 119946997 Common - diguanylate cyclase with PAS/PAC sensor Ping_3392 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119946565 Common - membrane bound O-acyl transferase, MBOAT family protein Ping_2944 82 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 119944853 Common - DNA polymerase III, delta prime subunit Ping_1095 200 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 119945059 Common - sulphate transporter Ping_1315 155 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 119945646 Common - ABC sugar transporter inner membrane binding protein Ping_1958 138 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 119943810 Common - hypothetical protein Ping_0016 28 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 119947189 Common - flagellin domain protein Ping_3587 117 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 119945008 Common - gas vesicle protein GVPa Ping_1260 14 None None None 119945762 Common - sn-glycerol-3-phosphate ABC transporter, binding protein inner membrane component Ping_2095 145 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 119946062 Common - diguanylate cyclase/phosphodiesterase Ping_2411 164 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119944041 Nonpathogen - FAD dependent oxidoreductase Ping_0255 6 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 119943964 Common - General secretion pathway ATPase protein Ping_0177 73 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 119946090 Common - phosphoenolpyruvate-protein phosphotransferase Ping_2440 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 119944709 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_0949 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946033 Common - ABC transporter ATP-binding protein Ping_2377 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 119947149 Common - hypothetical protein Ping_3547 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 119944728 Common - choline/carnitine/betaine transporter Ping_0969 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 119946257 Common - AMMECR1 domain protein Ping_2619 69 COG2078 AMMECR1, Uncharacterized conserved protein Function unknown 119944998 Nonpathogen - Gas vesicle synthesis GvpLGvpF Ping_1249 8 None None None 119945498 Common - transporter major facilitator superfamily MFS_1 Ping_1802 80 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944742 Common - isocitrate dehydrogenase, NADP-dependent Ping_0983 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 119945050 Common - hypothetical protein Ping_1305 19 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 119943987 Nonpathogen - hypothetical protein Ping_0200 1 None None None 119944997 Common - Gas vesicle synthesis GvpLGvpF Ping_1248 14 None None None 119946094 Common - peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins Ping_2444 36 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 119944381 Common - ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein Ping_0608 2 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 119946537 Common - hypothetical protein Ping_2914 5 None None None 119945141 Common - integration host factor, alpha subunit Ping_1405 212 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 119946295 Common - ABC transporter ATPase and inner membrane protein Ping_2662 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 119944023 Nonpathogen - hypothetical protein Ping_0237 1 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119944263 Common - ROK family protein Ping_0488 116 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 119945683 Common - peptide synthase Ping_1999 210 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119944566 Nonpathogen - hypothetical protein Ping_0803 2 None None None 119944580 Common - ribosome-binding factor A Ping_0818 169 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 119944767 Common - Na+/H+ antiporter NhaC Ping_1009 56 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 119944828 Common - hypothetical protein Ping_1070 19 COG3249 COG3249, Uncharacterized protein conserved in bacteria Function unknown 119945975 Common - hypothetical protein Ping_2315 10 None None None 119945705 Common - regulatory protein for cyclic-di-GMP, EAL domain Ping_2025 185 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119945868 Common - ribonuclease, Rne/Rng family protein Ping_2208 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 119944679 Common - chaperone protein DnaJ Ping_0918 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 119946152 Common - ABC transporter ATP-binding protein Ping_2512 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119945979 Nonpathogen - hypothetical protein Ping_2319 3 None None None 119944436 Common - efflux transporter, RND family, MFP subunit Ping_0664 166 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119944881 Common - maf protein Ping_1125 198 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 119944174 Common - DNA polymerase III chi subunit, HolC Ping_0394 50 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 119945458 Common - acriflavin resistance protein Ping_1756 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 119946018 Common - hypothetical protein DUF1315 Ping_2362 20 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 119943865 Common - ribosome maturation factor Ping_0072 222 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 119944929 Common - transport-associated Ping_1174 62 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 119946115 Common - hypothetical protein Ping_2465 36 COG2378 COG2378, Predicted transcriptional regulator Transcription 119946833 Common - S-adenosylmethionine synthetase Ping_3227 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 119945290 Common prpD 2-methylcitrate dehydratase Ping_1572 58 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 119946534 Common - ABC alpha-glucoside transporter inner membrane binding protein Ping_2911 142 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 119944351 Common - aspartate 1-decarboxylase Ping_0578 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 119945585 Common - MscS Mechanosensitive ion channel Ping_1890 14 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119943910 Common - hypothetical protein Ping_0117 2 None None None 119944868 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_1111 193 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119947071 Common - 4-hydroxybenzoate polyprenyl transferase Ping_3469 183 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 119944921 Common - type IV pilus biogenesis/stability protein PilW Ping_1166 110 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 119945960 Common - hypothetical protein Ping_2300 7 None None None 119944721 Common - adenylosuccinate lyase Ping_0961 227 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 119943942 Common - phage integrase family protein Ping_0155 2 None None None 119944370 Common - Fe-S metabolism associated SufE Ping_0597 93 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 119945467 Nonpathogen - hypothetical protein Ping_1765 3 None None None 119945241 Common - hypothetical protein Ping_1510 7 COG4245 TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain General function prediction only 119945453 Common - gas vesicle protein GvpN Ping_1750 101 COG0714 COG0714, MoxR-like ATPases General function prediction only 119945392 Common - hypothetical protein DUF140 Ping_1681 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 119946403 Nonpathogen - hypothetical protein Ping_2777 2 None None None 119944634 Common - ferric uptake regulator, Fur family protein Ping_0873 196 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 119945551 Nonpathogen - hypothetical protein Ping_1855 1 None None None 119946433 Common - inner-membrane translocator Ping_2807 145 COG4158 COG4158, Predicted ABC-type sugar transport system, permease component General function prediction only 119943827 Common - putative sensor with HAMP domain Ping_0033 26 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 119944101 Common - delta-aminolevulinic acid dehydratase Ping_0316 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 119945665 Common - para-aminobenzoate synthase, subunit I Ping_1978 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 119944145 Common thiG thiazole synthase Ping_0364 167 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 119947313 Common - CheR-type protein glutamate methyltransferase Ping_3720 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 119945678 Common - erythronate-4-phosphate dehydrogenase Ping_1994 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 119946617 Common - Urease accessory protein UreF Ping_2996 76 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 119944347 Common - ABC-2 type transporter permease protein Ping_0574 142 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 119946475 Common - hypothetical protein Ping_2850 12 None None None 119947288 Nonpathogen - putative PhnG protein Ping_3692 6 COG3624 PhnG, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 119945778 Nonpathogen - hypothetical protein Ping_2113 1 None None None 119946527 Common - glutathione-dependent formaldehyde-activating, GFA Ping_2904 55 COG3791 COG3791, Uncharacterized conserved protein Function unknown 119945963 Common - hypothetical protein Ping_2303 21 None None None 119947129 Common - pseudouridine synthase Ping_3527 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 119946160 Common - hypothetical protein Ping_2520 4 None None None 119944386 Common proX glycine betaine transporter periplasmic subunit Ping_0614 43 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 119944207 Common - polysaccharide export protein Ping_0428 103 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 119945425 Common - putative transcriptional regulator, fis family protein Ping_1720 9 None None None 119946176 Common - two component transcriptional regulator, LuxR family protein Ping_2536 176 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 119947156 Common - sugar-phosphate isomerases, RpiB/LacA/LacB family protein Ping_3554 125 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 119943935 Common - predicted DNA-binding transcriptional regulator, helix-turn-helix domain Ping_0147 7 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 119947170 Common - flagellar hook-associated protein 3 Ping_3568 90 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 119944478 Common - sodium/hydrogen exchanger Ping_0707 115 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 119944595 Common - hypothetical protein Ping_0833 10 None None None 119945477 Common - hypothetical protein Ping_1776 14 None None None 119947264 Common - Metal-dependent hydrolase involved in phosphonate metabolism-like protein Ping_3662 45 COG3454 COG3454, Metal-dependent hydrolase involved in phosphonate metabolism Inorganic ion transport and metabolism 119946730 Common - beta-lactamase domain protein Ping_3114 11 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 119943805 Common - Uncharacterised conserved protein UCP028301 Ping_0011 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 119946966 Common - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase Ping_3361 143 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 119944356 Common - Glutamate--tRNA ligase Ping_0583 241 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 119946714 Common - cold-shock DNA-binding domain protein Ping_3098 179 COG1278 CspC, Cold shock proteins Transcription 119943897 Common - General secretion pathway protein K Ping_0104 42 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 119946100 Common - ribonuclease T Ping_2450 79 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 119946318 Nonpathogen - hypothetical protein Ping_2688 3 None None None 119946742 Common - MCP methyltransferase, CheR-type Ping_3128 157 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 119947205 Common - pyruvate dehydrogenase complex, E2 component dihydrolipoamide acetyltransferase Ping_3603 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 119945309 Common - CRISPR-associated protein Cas1 Ping_1592 42 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 119944843 Common - ribosomal protein L32 Ping_1085 86 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 119944690 Common - bacterioferritin comigratory protein (Bcp) Ping_0929 207 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 119945926 Common - hypothetical protein Ping_2266 16 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 119946805 Common - peptidylprolyl isomerase, FKBP-type Ping_3199 122 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 119946246 Common - Carboxylesterase Ping_2608 80 COG0400 COG0400, Predicted esterase General function prediction only 119945299 Common - hypothetical protein Ping_1581 4 None None None 119946148 Common - hypothetical protein Ping_2508 9 COG3934 COG3934, Endo-beta-mannanase Carbohydrate transport and metabolism 119945768 Nonpathogen - hypothetical protein Ping_2102 2 None None None 119946581 Common - tRNA(Ile)-lysidine synthetase Ping_2960 212 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 119947109 Common rpsE 30S ribosomal protein S5 Ping_3507 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 119943998 Common - Oligopeptidase A Ping_0212 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 119945823 Common - penicillin-binding protein 1B Ping_2163 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 119945014 Common - stress protein, tellurium resistance protein Ping_1266 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119946765 Common - peptide ABC transporter, protein inner membrane binding component Ping_3158 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119946231 Common - hypothetical protein DUF323 Ping_2592 90 COG1262 COG1262, Uncharacterized conserved protein Function unknown 119946758 Common - Auxin Efflux Carrier Ping_3151 36 COG0679 COG0679, Predicted permeases General function prediction only 119944442 Nonpathogen - hypothetical protein Ping_0670 1 None None None 119945827 Common - molybdopterin biosynthesis MoaE Ping_2167 161 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 119943954 Common - Ribulose-phosphate 3-epimerase Ping_0167 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 119947139 Common - ABC transporter substrate binding inner membrane protein Ping_3537 188 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 119947274 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Ping_3674 23 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119946170 Common - hypothetical protein DUF1568 Ping_2530 35 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947272 Common - maleate cis-trans isomerase Ping_3672 40 COG3473 COG3473, Maleate cis-trans isomerase Secondary metabolites biosynthesis, transport, and catabolism 119947280 Common phnP carbon-phosphorus lyase complex accessory protein Ping_3684 82 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 119945528 Common - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Ping_1832 110 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 119947191 Common - flagellin domain protein Ping_3589 118 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 119943994 Common - hypothetical protein Ping_0208 12 None None None 119946373 Common - 2-aminoethylphosphonate--pyruvate transaminase Ping_2747 156 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 119945460 Common - transcriptional regulator of TetR family protein Ping_1758 16 COG1309 AcrR, Transcriptional regulator Transcription 119944904 Common - UDP-N-acetylmuramate--alanine ligase Ping_1148 209 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 119944775 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Ping_1017 219 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 119946219 Common - Radical SAM domain protein Ping_2579 11 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 119944575 Common - phosphoglucosamine mutase Ping_0813 238 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 119946027 Common - hypothetical protein Ping_2371 57 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 119945532 Nonpathogen - hypothetical protein Ping_1836 1 None None None 119946020 Common - glycogen branching enzyme Ping_2364 150 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 119946167 Common - hypothetical protein Ping_2527 12 None None None 119944533 Common - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Ping_0766 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 119946654 Common glgC glucose-1-phosphate adenylyltransferase Ping_3033 174 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 119943842 Common - ABC taurine transporter, binding protein inner membrane component Ping_0049 183 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 119944013 Common - acetylornithine deacetylase Ping_0227 204 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 119944368 Common - hypothetical protein Ping_0595 16 COG3097 COG3097, Uncharacterized protein conserved in bacteria Function unknown 119945436 Common - amino acid permease-associated region Ping_1733 86 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 119943838 Common - short-chain dehydrogenase/reductase SDR Ping_0045 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 119947059 Common - Nucleoside-diphosphate-sugar epimerase Ping_3457 228 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 119945012 Common - stress protein, tellurium resistance protein Ping_1264 29 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119943924 Common dctQ-4 tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ Ping_0134 49 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119945738 Common - Sterol-binding domain protein Ping_2067 31 COG3154 COG3154, Putative lipid carrier protein Lipid metabolism 119945919 Common - putative signal transduction protein with CBS domains Ping_2259 51 COG2524 COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains Transcription 119944056 Common - Tat (twin-arginine translocation) pathway signal sequence domain protein Ping_0271 14 None None None 119945592 Common - hypothetical protein Ping_1898 16 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 119946339 Common - protoheme IX farnesyltransferase Ping_2710 169 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 119944712 Common - long-chain-fatty-acid--CoA ligase Ping_0952 204 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 119947024 Common - ribosomal protein S18 Ping_3421 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 119944776 Common - chorismate synthase Ping_1018 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 119946778 Common - ABC sugar (glycerol) transporter binding protein inner membrane protein Ping_3171 163 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 119944421 Common paaN bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase Ping_0649 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119945104 Common - Methyltransferase type 12 Ping_1362 21 COG0500 SmtA, SAM-dependent methyltransferases Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 119946060 Common - ABC phosphate transporter eriplasmic phosphate-binding protein Ping_2409 114 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 119946615 Common ureC urease subunit alpha Ping_2994 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 119945598 Nonpathogen - hypothetical protein Ping_1904 1 COG3462 COG3462, Predicted membrane protein Function unknown 119945034 Common - hypothetical protein DUF558 Ping_1288 192 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 119947291 Common - ABC phosphonate transporter periplasmic phosphonate-binding protein Ping_3695 84 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 119943875 Common trkH potassium uptake protein TrkH Ping_0082 144 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 119944029 Common - phage transcriptional regulator, AlpA Ping_0243 43 COG3311 AlpA, Predicted transcriptional regulator Transcription 119947309 Common - DNA polymerase III, beta subunit Ping_3715 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 119944094 Common - membrane protein-like protein Ping_0309 26 COG3205 COG3205, Predicted membrane protein Function unknown 119946506 Nonpathogen - hypothetical protein Ping_2883 1 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 119944988 Common - diguanylate cyclase/phosphodiesterase Ping_1239 179 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119945810 Nonpathogen - hypothetical protein Ping_2148 1 None None None 119945062 Common - pseudouridine synthase Rlu family protein, TIGR01621 Ping_1318 177 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 119943929 Common - glycoside hydrolase, family 3 domain protein Ping_0139 87 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 119944361 Common - hypothetical protein Ping_0588 3 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 119944569 Common - TatD-related deoxyribonuclease Ping_0807 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 119944401 Common - glutamate racemase Ping_0629 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 119947100 Common - ribosomal protein L17 Ping_3498 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 119946055 Common - metal-dependent protein hydrolase Ping_2404 16 COG4286 COG4286, Uncharacterized conserved protein related to MYG1 family Function unknown 119945733 Common - hypothetical protein Ping_2062 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 119944735 Common modF ABC transporter for molybdenum ATP-binding protein ModF Ping_0976 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 119944550 Common - transposase, IS4 family protein Ping_0786 32 COG5433 COG5433, Transposase DNA replication, recombination, and repair 119945082 Common - proton/glutamate symporter Ping_1338 164 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 119944791 Common - transcriptional regulator, histidine utilization repressor, GntR family protein Ping_1033 127 COG2188 PhnF, Transcriptional regulators Transcription 119944242 Nonpathogen - hypothetical protein Ping_0466 7 None None None 119947300 Common - Thioredoxin domain Ping_3706 27 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 119944667 Common - spermidine synthase Ping_0906 106 COG4262 COG4262, Predicted spermidine synthase with an N-terminal membrane domain General function prediction only 119945547 Common - hypothetical protein Ping_1851 8 None None None 119946210 Nonpathogen - hypothetical protein Ping_2570 5 None None None 119944641 Common - glycogen/starch/alpha-glucan phosphorylases Ping_0880 143 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 119944296 Common - trehalose-6-phosphate hydrolase Ping_0523 173 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119946199 Nonpathogen - hypothetical protein Ping_2559 3 None None None 119945954 Common - dihydroorotase Ping_2294 89 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 119945165 Common - FMN-binding domain protein Ping_1429 72 COG3901 NosR, Regulator of nitric oxide reductase transcription Transcription 119944286 Common - PKD domain containing protein Ping_0512 32 None None None 119944337 Common - peptide ABC transporter, protein inner membrane binding component Ping_0564 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119945202 Common clpX ATP-dependent protease ATP-binding subunit Ping_1466 237 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 119946045 Common - GTP-binding protein, HSR1-related Ping_2390 221 COG2262 HflX, GTPases General function prediction only 119945710 Common - diaminopropionate ammonia-lyase Ping_2030 120 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 119945262 Common - heat shock protein Hsp20 Ping_1533 158 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 119946729 Nonpathogen - hypothetical protein Ping_3113 3 None None None 119945259 Common - hypothetical protein Ping_1530 42 COG3651 COG3651, Uncharacterized protein conserved in bacteria Function unknown 119945671 Common - hypothetical protein Ping_1984 5 None None None 119944521 Common - Na(+)-translocating NADH-quinone reductase subunit E Ping_0750 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 119946679 Nonpathogen - hypothetical protein Ping_3060 1 None None None 119946043 Nonpathogen - transposase IS3/IS911 family protein Ping_2388 3 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947169 Common - OmpA/MotB domain protein Ping_3567 116 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 119947110 Common - ribosomal protein L18 Ping_3508 200 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 119943848 Common - ribosomal protein L28 Ping_0055 163 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 119946864 Common - hypothetical protein DUF88 Ping_3258 65 COG1432 COG1432, Uncharacterized conserved protein Function unknown 119946529 Common - hypothetical protein DUF302 Ping_2906 22 COG3439 COG3439, Uncharacterized conserved protein Function unknown 119944850 Common - aminotransferase, class IV Ping_1092 156 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 119945170 Common - hypothetical protein Ping_1434 5 None None None 119945357 Common - alcohol dehydrogenase, iron-containing Ping_1645 162 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 119945362 Nonpathogen - hypothetical protein Ping_1650 11 None None None 119946088 Common - cysteine synthase A Ping_2438 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 119944676 Common - NAD(+) kinase Ping_0915 238 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 119946208 Common - hypothetical protein Ping_2568 25 None None None 119945895 Common - hypothetical protein Ping_2235 3 COG5404 SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation Cell division and chromosome partitioning 119944251 Common - Fimbrial protein pilin Ping_0475 9 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 119943972 Common - phage shock protein A, PspA Ping_0185 40 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 119944684 Common - hypothetical protein DUF19 Ping_0923 80 COG1469 COG1469, Uncharacterized conserved protein Function unknown 119944711 Common - short chain dehydrogenase Ping_0951 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 119947073 Common - dihydrolipoamide dehydrogenase Ping_3471 239 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 119945470 Common - ABC transporter complex for phosphonate inner membrane binding subunit Ping_1768 84 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 119946275 Common - P-loop ATPase Ping_2639 10 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 119944946 Common - excinuclease ABC, C subunit Ping_1193 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 119945354 Common - membrane-bound serine protease (ClpP class) Ping_1642 66 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 119943852 Common slmA nucleoid occlusion protein Ping_0059 59 COG1309 AcrR, Transcriptional regulator Transcription 119945179 Common - Riboflavin synthase Ping_1443 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 119945069 Common - scaffold protein Ping_1325 149 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 119945196 Common - exodeoxyribonuclease V, alpha subunit Ping_1460 122 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 119945958 Common - hypothetical protein Ping_2298 17 None None None 119944079 Common - pilus assembly protein Ping_0294 10 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 119946442 Common - hypothetical protein Ping_2817 26 None None None 119945987 Common - sulfotransferase Ping_2328 19 None None None 119946077 Common - Amidase Ping_2426 214 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 119946356 Common - predicted DNA-binding transcriptional regulator, helix-turn-helix domain Ping_2727 106 COG1396 HipB, Predicted transcriptional regulators Transcription 119944397 Common ftsX cell division ABC transporter component permease protein FtsX Ping_0625 112 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 119944216 Common - transporter of NadC family protein Ping_0438 37 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 119945809 Nonpathogen - hypothetical protein Ping_2147 1 None None None 119947060 Common - glycosyltransferases-like protein Ping_3458 57 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 119945572 Common - hypothetical protein Ping_1877 23 COG4628 COG4628, Uncharacterized conserved protein Function unknown 119946416 Common - bifunctional carbohydrate binding and transport protein Ping_2790 101 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119946673 Nonpathogen - hypothetical protein Ping_3054 1 None None None 119944536 Common - GDP-mannose 4,6-dehydratase Ping_0770 228 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 119946789 Common - putative outer membrane adhesin-like protein Ping_3182 141 None None None 119944499 Common - OmpA domain protein Ping_0728 160 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 119946670 Common - MscS Mechanosensitive ion channel Ping_3051 219 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119946484 Common - hypothetical protein Ping_2860 7 None None None 119947200 Common - anti-sigma-28 factor, FlgM Ping_3598 2 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 119945420 Nonpathogen - hypothetical protein Ping_1715 1 None None None 119946466 Common - glycoside hydrolase, family 1 Ping_2841 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 119945495 Common - hypothetical protein DUF1499 Ping_1798 21 COG4446 COG4446, Uncharacterized protein conserved in bacteria Function unknown 119944426 Common - phenylacetate-CoA oxygenase/reductase, PaaK subunit Ping_0654 145 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 119946592 Common - phosphatidate cytidylyltransferase Ping_2971 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 119946774 Nonpathogen - hypothetical protein Ping_3167 1 None None None 119945228 Common - Stearoyl-CoA 9-desaturase Ping_1494 57 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 119945931 Common - Radical SAM N-terminal domain protein Ping_2271 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 119945512 Common - metallophosphoesterase Ping_1816 96 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 119943991 Nonpathogen - hypothetical protein Ping_0205 1 None None None 119944344 Common dctQ-3 tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ Ping_0571 47 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119944678 Common - chaperone protein DnaK Ping_0917 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 119944223 Nonpathogen - hypothetical protein Ping_0446 1 None None None 119946609 Common - ABC transporter inner-membrane translocator Ping_2988 153 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 119946623 Common - shikimate 5-dehydrogenase Ping_3002 213 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 119944622 Common - arginine decarboxylase Ping_0861 139 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 119945893 Common rdgC recombination associated protein Ping_2233 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 119944451 Common - type IV pilin Ping_0679 6 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 119943877 Nonpathogen - hypothetical protein Ping_0084 1 None None None 119945858 Common - PP-loop domain protein Ping_2198 166 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 119943959 Common - dihydroneopterin aldolase Ping_0172 120 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 119944687 Common - peptidase M48, Ste24p Ping_0926 126 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 119944486 Common - hypothetical protein Ping_0715 17 None None None 119945427 Common - hypothetical transmembrane protein DUF6 Ping_1722 117 COG2962 RarD, Predicted permeases General function prediction only 119946883 Common - lysyl-tRNA synthetase-related protein GenX Ping_3277 210 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 119947253 Common - cobalamin synthesis protein, P47K Ping_3651 104 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 119945187 Common - phenylacetic acid degradation-related protein Ping_1451 92 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 119944579 Common - translation initiation factor IF-2 Ping_0817 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 119945379 Common - transporter major facilitator superfamily MFS_1 Ping_1667 108 None None None 119946936 Common - ABC-type uncharacterized transport system, periplasmic component Ping_3330 28 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 119944789 Common - formimidoylglutamase Ping_1031 45 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 119944506 Common - electron transport complex, RnfABCDGE type, D subunit Ping_0735 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 119947318 Common avtA valine--pyruvate transaminase Ping_3725 159 COG3977 COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase Amino acid transport and metabolism 119944191 Nonpathogen - hypothetical protein Ping_0411 2 None None None 119945751 Common - D-amino-acid dehydrogenase Ping_2082 143 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 119944171 Common - cytochrome c, class I Ping_0391 40 COG2863 COG2863, Cytochrome c553 Energy production and conversion 119944616 Common ilvY DNA-binding transcriptional regulator IlvY Ping_0855 188 COG0583 LysR, Transcriptional regulator Transcription 119944491 Common - cytochrome bd ubiquinol oxidase, subunit I Ping_0720 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 119945920 Common - hypothetical protein Ping_2260 30 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 119946791 Common - outer membrane efflux protein Ping_3184 41 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 119946362 Common - cation diffusion facilitator family transporter Ping_2733 90 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 119944306 Common - hypothetical protein UPF0054 Ping_0533 176 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 119944404 Common - HPP family protein+B94 Ping_0632 72 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 119945121 Common - predicted secreted protein containing plastocyanin domain ) Ping_1382 15 COG4633 COG4633, Uncharacterized protein conserved in bacteria Function unknown 119945994 Common - hypothetical protein Ping_2335 7 None None None 119946234 Common - TRAP transporter, 4TM/12TM fusion protein Ping_2595 88 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 119946410 Common - peptidase M24 Ping_2784 196 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 119944132 Common - amino acid-binding ACT domain protein Ping_0347 22 COG3978 COG3978, Acetolactate synthase (isozyme II), small (regulatory) subunit Function unknown 119946068 Common - Amidase Ping_2417 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 119943886 Common - phosphoenolpyruvate carboxykinase Ping_0093 95 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 119944098 Common - ribosomal protein S21 Ping_0313 102 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 119946768 Common - HAD-superfamily subfamily IB hydrolase, TIGR01490 Ping_3161 76 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 119945516 Nonpathogen - hypothetical protein Ping_1820 6 None None None 119944480 Common dctQ-1 tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ Ping_0709 64 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119945721 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_2047 188 COG0583 LysR, Transcriptional regulator Transcription 119946631 Common - hypothetical protein Ping_3010 64 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 119945338 Common - hypothetical protein Ping_1622 45 COG2928 COG2928, Uncharacterized conserved protein Function unknown 119946598 Common - hypothetical protein Ping_2977 46 None None None 119943937 Common - type III restriction enzyme, res subunit Ping_0150 115 COG4096 HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 119943909 Common mgsA methylglyoxal synthase Ping_0116 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 119946203 Common - hypothetical protein Ping_2563 19 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 119945862 Common - lipoprotein releasing system, ATP-binding protein Ping_2202 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 119944281 Common - glutathione-disulfide reductase Ping_0507 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 119943922 Common - D-mannonate oxidoreductase NAD-binding Ping_0132 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 119944255 Nonpathogen - hypothetical protein Ping_0479 1 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 119944528 Common - hypothetical protein Ping_0757 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 119944540 Common - CDP-glucose 4,6-dehydratase Ping_0774 160 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119944235 Nonpathogen - hypothetical protein Ping_0458 1 None None None 119946840 Common - Adenylosuccinate synthase Ping_3234 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 119945543 Common - hypothetical protein Ping_1847 9 None None None 119946366 Common - hypothetical protein Ping_2738 95 COG0579 COG0579, Predicted dehydrogenase General function prediction only 119944156 Common - A/G-specific adenine glycosylase Ping_0376 227 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 119945638 Common - nucleoside recognition domain protein Ping_1950 20 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 119947324 Common - ATP synthase F1, gamma subunit Ping_3731 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 119946908 Common - single-stranded-DNA-specific exonuclease RecJ Ping_3302 194 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 119946923 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_3317 194 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946574 Common - gamma-glutamyl kinase Ping_2953 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 119944975 Common - hypothetical protein Ping_1225 20 COG5622 COG5622, Protein required for attachment to host cells Cell motility and secretion 119946847 Common - N-acetylmuramoyl-L-alanine amidase Ping_3241 175 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 119946335 Common - hypothetical protein Ping_2706 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 119946283 Common - GCN5-related N-acetyltransferase Ping_2648 89 COG2153 ElaA, Predicted acyltransferase General function prediction only 119945744 Common - ABC transporter substrate binding inner membrane protein Ping_2074 183 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 119944515 Common - translation initiation factor IF-1 Ping_0744 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 119945696 Common lacI lac repressor Ping_2013 130 COG1609 PurR, Transcriptional regulators Transcription 119944064 Common - cold-shock DNA-binding domain protein Ping_0279 179 COG1278 CspC, Cold shock proteins Transcription 119946855 Common - ferredoxin-type 4Fe-4S protein Ping_3249 2 None None None 119946958 Common - transcriptional regulator of AsnC/Lrp family protein Ping_3352 156 COG1522 Lrp, Transcriptional regulators Transcription 119947007 Common - Lysine exporter protein (LYSE/YGGA) Ping_3404 118 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 119943867 Common - DNA topoisomerase, type IA, zn finger domain protein Ping_0074 128 COG0551 TopA, Zn-finger domain associated with topoisomerase type I DNA replication, recombination, and repair 119944496 Common - Biopolymer transport protein ExbD/TolR Ping_0725 139 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 119945045 Common - ABC transporter inner-membrane translocator Ping_1299 107 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 119947298 Nonpathogen - hypothetical protein Ping_3703 1 None None None 119945869 Common - thioredoxin reductase Ping_2209 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 119944883 Common - membrane protein-like protein Ping_1127 55 COG3164 COG3164, Predicted membrane protein Function unknown 119945221 Common - hypothetical protein Ping_1487 2 None None None 119946508 Common - Mammalian cell entry related domain protein Ping_2885 101 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 119946022 Common - Aldose 1-epimerase Ping_2366 61 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 119946397 Common - CDP-alcohol phosphatidyltransferase Ping_2771 34 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 119945028 Common - conserved hypothetical HI0017 Ping_1282 18 COG3445 COG3445, Acid-induced glycyl radical enzyme General function prediction only 119945758 Common - transcriptional regulator for glycerol-3-phosphate regulon, DeoR family protein Ping_2091 113 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 119944601 Nonpathogen - hypothetical protein Ping_0839 8 None None None 119945218 Common - thioesterase superfamily protein Ping_1483 77 COG0824 FcbC, Predicted thioesterase General function prediction only 119946495 Common - stringent starvation protein A, glutathione S-transferase N-terminal domain Ping_2871 88 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119945086 Common - DNA polymerase IV Ping_1342 182 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 119946293 Common - hypothetical protein Ping_2660 11 None None None 119946786 Common - ferric uptake regulator, Fur family protein Ping_3179 134 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 119944952 Common - diguanylate cyclase with PAS/PAC sensor Ping_1200 188 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944139 Common - elongation factor G Ping_0357 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 119946532 Common - transcriptional regulator, periplasmic binding protein of LacI family protein Ping_2909 121 COG1609 PurR, Transcriptional regulators Transcription 119944585 Common - ABC transporter ATP-binding protein Ping_0823 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 119945852 Common - ABC dipeptide transporter extracellular solute-binding protein, family 5 Ping_2192 183 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 119945795 Common - transporter major facilitator superfamily MFS_1 Ping_2132 223 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944026 Common - hypothetical protein Ping_0240 11 None None None 119945333 Common pspB phage shock protein B Ping_1617 21 None None None 119944680 Common - peptidylprolyl isomerase, FKBP-type Ping_0919 142 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 119946916 Common - inner membrane protein DUF412 Ping_3310 21 COG3092 COG3092, Uncharacterized protein conserved in bacteria Function unknown 119945211 Common - aminotransferase AlaT Ping_1475 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 119944164 Common - hypothetical transmembrane protein DUF6 Ping_0384 82 COG2510 COG2510, Predicted membrane protein Function unknown 119946988 Common - DNA mismatch repair protein MutS Ping_3383 205 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 119944265 Common nagB glucosamine-6-phosphate deaminase Ping_0490 83 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 119945472 Common - ABC phosphonate transporter periplasmic phosphonate-binding protein Ping_1770 76 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 119944549 Common - predicted glycosyltransferase Ping_0785 4 None None None 119947225 Common - Guanylate kinase Ping_3623 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 119945349 Common - lactoylglutathione lyase Ping_1635 8 None None None 119944939 Common - hypothetical protein Ping_1186 6 None None None 119946436 Common - hypothetical protein Ping_2811 2 None None None 119943829 Common - transporter major facilitator superfamily MFS_1 Ping_0035 114 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119946035 Common - transcriptional regulator of LysR family protein Ping_2379 158 COG0583 LysR, Transcriptional regulator Transcription 119946279 Common - GreA/GreB family elongation factor Ping_2644 13 COG0782 GreA, Transcription elongation factor Transcription 119944900 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase Ping_1144 212 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 119943931 Common - diguanylate cyclase/phosphodiesterase Ping_0142 182 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119944593 Common - hypothetical protein Ping_0831 5 None None None 119946092 Common - arsenate reductase Ping_2442 103 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 119946814 Common secB protein-export protein chaperone SecB Ping_3208 108 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 119944392 Common - Uncharacterised conserved protein UCP025560 Ping_0620 22 COG3784 COG3784, Uncharacterized protein conserved in bacteria Function unknown 119945175 Common - ATP-cone domain protein Ping_1439 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 119944898 Common - UDP-N-acetylmuramyl-tripeptide synthetases Ping_1142 212 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 119947187 Common - flagellar protein FliS Ping_3585 17 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 119945057 Common - diguanylate cyclase Ping_1313 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119946261 Common - major outer membrane lipoprotein, putative Ping_2623 19 COG4238 COG4238, Murein lipoprotein Cell envelope biogenesis, outer membrane 119944277 Common - PTSINtr with GAF domain, PtsP Ping_0503 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 119943973 Common - hypothetical protein Ping_0186 10 COG3789 COG3789, Uncharacterized protein conserved in bacteria Function unknown 119946429 Common - phosphoribulokinase/uridine kinase family protein Ping_2803 36 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 119944995 Nonpathogen - heat shock protein, HSP20 family protein Ping_1246 31 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 119944598 Common - sensor histidine kinase, PAS domain Ping_0836 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 119944021 Nonpathogen - hypothetical protein Ping_0235 1 None None None 119944707 Common - RNA polymerase sigma factor Ping_0946 125 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 119945109 Common - efflux transporter, RND family, MFP subunit Ping_1369 166 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119945151 Common - hypothetical protein Ping_1415 4 None None None 119944276 Common - nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein Ping_0502 116 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119946328 Common - transposase and inactivated derivative Ping_2699 27 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946099 Common - glutaredoxin-like protein Ping_2449 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 119946421 Common - FAD dependent oxidoreductase Ping_2795 81 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 119944054 Common - hypothetical protein Ping_0269 14 None None None 119945279 Nonpathogen - hypothetical protein Ping_1555 1 None None None 119945496 Common - peptidase M48, Ste24p Ping_1800 131 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 119944851 Common - aminodeoxychorismate lyase Ping_1093 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 119944419 Common dctQ-5 tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ Ping_0647 13 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119947132 Common - Alcohol dehydrogenase, zinc-binding domain protein Ping_3530 202 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 119944542 Common - UDP-glucose 4-epimerase Ping_0776 158 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119943821 Common - hypothetical protein Ping_0027 5 None None None 119945403 Common - hypothetical protein Ping_1694 13 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 119945526 Common - cytochrome c, class I Ping_1830 58 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 119945538 Nonpathogen - hypothetical protein Ping_1842 1 None None None 119945917 Common - citrate synthase I Ping_2257 194 COG0372 GltA, Citrate synthase Energy production and conversion 119944582 Common - hypothetical protein Ping_0820 4 None None None 119945715 Common - TRAP dicarboxylate transporter- DctP subunit Ping_2035 102 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119945674 Common - glycoside hydrolase, family 3 domain protein Ping_1987 175 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 119945748 Common - transport-associated Ping_2078 17 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 119944830 Common - hypothetical protein Ping_1072 9 COG3308 COG3308, Predicted membrane protein Function unknown 119944446 Common - Pseudouridylate synthase Ping_0674 85 COG0585 COG0585, Uncharacterized conserved protein Function unknown 119944474 Common - formate/nitrite transporter Ping_0703 95 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 119945909 Common - succinyl-CoA synthetase, alpha subunit Ping_2249 215 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 119944362 Common - regulatory protein for cyclic-di-GMP, EAL/GGDEF domains Ping_0589 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119945942 Common - glutaredoxin 2 Ping_2282 13 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 119945325 Common - hypothetical protein Ping_1609 12 COG3094 COG3094, Uncharacterized protein conserved in bacteria Function unknown 119944004 Common - UDP-N-acetylenolpyruvoylglucosamine reductase Ping_0218 204 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 119943962 Common - conserved hypothetical protein 245 Ping_0175 67 COG0390 COG0390, ABC-type uncharacterized transport system, permease component General function prediction only 119946680 Nonpathogen - hypothetical protein Ping_3061 1 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 119946872 Common - putative lipoprotein Ping_3266 127 COG4105 ComL, DNA uptake lipoprotein General function prediction only 119945295 Common - FAD dependent oxidoreductase Ping_1577 8 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 119945319 Common - cyclase/dehydrase Ping_1603 101 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 119946644 Common - heme exporter protein CcmB Ping_3023 86 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 119947154 Common - 1-phosphofructokinase Ping_3552 119 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 119945848 Common - putative solute/DNA competence effector Ping_2188 28 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 119945048 Common - exonuclease subunit SbcD Ping_1302 108 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 119944340 Common - pseudouridine synthase Ping_0567 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 119944693 Common - hypothetical protein Ping_0932 52 COG2836 COG2836, Uncharacterized conserved protein Function unknown 119946250 Common - 30S ribosomal protein S11 Ping_2612 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 119946946 Common - TonB-dependent receptor, plug Ping_3340 128 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 119945250 Nonpathogen - Isoprenylcysteine carboxyl methyltransferase Ping_1520 18 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 119945562 Common - aconitate hydratase Ping_1867 222 COG1048 AcnA, Aconitase A Energy production and conversion 119945764 Common - HAD-superfamily hydrolase, subfamily IIB Ping_2097 25 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 119943862 Common - transposase, IS4 family protein Ping_0069 21 None None None 119945825 Common - molybdate ABC transporter, inner membrane subunit Ping_2165 207 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 119945305 Nonpathogen - hypothetical protein Ping_1588 4 None None None 119946619 Common - transposase IS200-family protein Ping_2998 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947082 Common - peptidase M16 domain protein Ping_3480 192 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 119945413 Common - hypothetical protein Ping_1707 4 None None None 119944388 Common - glycine betaine/L-proline ABC transporter, ATPase subunit Ping_0616 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 119947331 Common - parB-like partition proteins Ping_3738 183 COG1475 Spo0J, Predicted transcriptional regulators Transcription 119944117 Common - 3-deoxy-D-manno-octulosonic-acid transferase Ping_0332 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 119944638 Common - alpha/beta hydrolase fold Ping_0877 145 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119944106 Common - 2-polyprenylphenol 6-hydroxylase Ping_0321 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 119946879 Common - integral membrane protein MviN Ping_3273 200 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 119944909 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Ping_1153 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 119946343 Common - cytochrome c oxidase, subunit III Ping_2714 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 119947243 Common - Uroporphyrinogen III synthase HEM4 Ping_3641 48 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 119946727 Nonpathogen - hypothetical protein Ping_3111 4 None None None 119946259 Common - chaperone DnaJ domain protein Ping_2621 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 119946029 Common - hydroxyethylthiazole kinase Ping_2373 77 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 119946978 Common - glutamate--cysteine ligase Ping_3373 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 119944961 Common - hydrogenase expression/formation protein HypE Ping_1210 123 COG0309 HypE, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 119946510 Common - ABC transporter ATP-binding protein Ping_2887 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 119945814 Common - GTP-binding protein, HSR1-related Ping_2152 15 COG3596 COG3596, Predicted GTPase General function prediction only 119943831 Common - ABC-type uncharacterized transport system, periplasmic component Ping_0037 29 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 119945876 Common - ribosomal protein L20 Ping_2216 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 119944930 Common - DnaA initiator-associating factor for replication initiation Ping_1175 122 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 119945902 Common - pseudouridine synthase Ping_2242 205 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 119946943 Common - phosphatidylserine decarboxylase Ping_3337 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 119943895 Common - general secretion pathway protein I Ping_0102 14 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 119946740 Common - hypothetical protein Ping_3125 20 COG1373 COG1373, Predicted ATPase (AAA+ superfamily) General function prediction only 119947166 Common fliG flagellar motor switch protein G Ping_3564 120 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 119947207 Common - alanine dehydrogenase Ping_3605 164 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 119945479 Common - putative PAS/PAC sensor protein Ping_1778 94 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 119945620 Nonpathogen - hypothetical protein Ping_1930 1 None None None 119946316 Common - NERD domain protein Ping_2685 10 COG2323 COG2323, Predicted membrane protein Function unknown 119944180 Nonpathogen - predicted carbonic anhydrase Ping_0400 1 None None None 124021678 Common - hypothetical protein DUF86 Ping_0761 7 COG2445 COG2445, Uncharacterized conserved protein Function unknown 119944240 Common - F0F1 ATP synthase subunit epsilon Ping_0464 18 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 119945364 Common - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Ping_1652 215 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 119945629 Common - 2-nitropropane dioxygenase, NPD Ping_1940 121 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 119947014 Nonpathogen - hypothetical protein Ping_3411 1 None None None 119946142 Nonpathogen - hypothetical protein Ping_2498 2 None None None 119946153 Common - alcohol dehydrogenase, NAD(P)-dependent, iron-containing Ping_2513 171 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 119945999 Common - anion transporter Ping_2341 128 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 119947078 Common - acriflavin resistance protein Ping_3476 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 119947302 Common - ABC transporter permease protein Ping_3708 190 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 119945372 Common - Disulphide bond formation protein DsbB Ping_1660 46 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 119946708 Common - transporter major facilitator superfamily MFS_1 Ping_3090 157 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119945667 Common - dnaK suppressor Ping_1980 8 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 119944260 Common - hypothetical protein Ping_0485 30 None None None 119945288 Common - hypothetical protein UPF0061 Ping_1567 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 119946011 Common - ATPase, P-type (transporting), HAD superfamily, subfamily IC Ping_2353 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 119944457 Common - thymidine kinase Ping_0685 96 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 119946149 Common - ABC sugar transporter inner membrane binding protein Ping_2509 151 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 119944284 Nonpathogen - hypothetical protein Ping_0510 1 None None None 119946405 Common - dihydrolipoamide dehydrogenase E3 component of 3 enzyme complexes Ping_2779 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 119945016 Common - hypothetical protein Ping_1268 24 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 119944072 Common tyrA bifunctional chorismate mutase/prephenate dehydrogenase Ping_0287 68 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 119947107 Common - ribosomal protein L15 Ping_3505 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 119943956 Common - lactoylglutathione lyase Ping_0169 128 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 119946113 Common - phage integrase family protein Ping_2463 105 COG0582 XerC, Integrase DNA replication, recombination, and repair 119944189 Nonpathogen - dipeptidase Ping_0409 1 None None None 119945601 Common - GCN5-related N-acetyltransferase Ping_1907 20 COG0456 RimI, Acetyltransferases General function prediction only 119945937 Common - DNA polymerase III, subunits gamma and tau Ping_2277 246 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 119945488 Common - transcriptional regulator of TetR family protein Ping_1790 35 COG1309 AcrR, Transcriptional regulator Transcription 119947046 Common - intracellular sulfur oxidation protein of DsrE family protein Ping_3443 42 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 119945283 Common - ISSod7, transposase Ping_1560 9 None None None 119945277 Common - transposase, IS4 family protein Ping_1552 76 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947270 Common - transposase IS3/IS911 family protein Ping_3669 70 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 119945143 Common - hypothetical protein Ping_1407 11 COG5473 COG5473, Predicted integral membrane protein Function unknown 119944539 Common - glucose-1-phosphate cytidylyltransferase Ping_0773 166 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 119947106 Common - preprotein translocase, SecY subunit Ping_3504 216 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 119944214 Common - UDP-N-acetyl-D-mannosamine transferase Ping_0436 111 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 119946174 Common - 3-demethylubiquinone-9 3-methyltransferase Ping_2534 153 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 119945881 Common - Paraquat-inducible protein A Ping_2221 50 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 119947266 Nonpathogen - hypothetical protein Ping_3664 1 None None None 119944462 Common - OmpA/MotB domain protein Ping_0690 146 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 119945702 Common lacZ beta-D-galactosidase Ping_2019 72 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 119944374 Common - ribose 5-phosphate isomerase Ping_0601 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 119946107 Common - peptidase M14, carboxypeptidase A Ping_2457 22 COG3608 COG3608, Predicted deacylase General function prediction only 119947029 Common - ABC transporter ATP-binding protein Ping_3426 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 119946739 Common - tRNA-dihydrouridine synthase A Ping_3123 203 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 119944639 Common - regulatory protein for replication initiation in SeqA family protein Ping_0878 23 COG3057 SeqA, Negative regulator of replication initiationR DNA replication, recombination, and repair 119945112 Common - sensor histidine kinase with ATPase domain Ping_1373 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119946197 Nonpathogen - hypothetical protein Ping_2557 1 None None None 119946253 Common - ribosomal protein L17 Ping_2615 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 119944086 Common - uncharacterized domain 1 Ping_0301 100 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 119945685 Nonpathogen - hypothetical protein Ping_2001 2 None None None 119945650 Nonpathogen - hypothetical protein Ping_1963 1 None None None 119944902 Common - cell division protein FtsW Ping_1146 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 119945587 Common - lipase, class 3 Ping_1892 21 COG3675 COG3675, Predicted lipase Lipid metabolism 119946303 Common - peptidase C26 Ping_2671 135 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 119944115 Common - 3-deoxy-D-manno-octulosonic-acid kinase Ping_0330 20 COG3642 COG3642, Mn2+-dependent serine/threonine protein kinase Signal transduction mechanisms 119943940 Nonpathogen - hypothetical protein Ping_0153 1 None None None 119944815 Common - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase Ping_1057 220 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 119945456 Common - hypothetical protein Ping_1753 23 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 119946829 Common - nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein Ping_3223 102 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 119945853 Common - peptide ABC transporter, protein inner membrane binding component Ping_2193 213 COG4168 SapB, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 119944058 Common - diguanylate cyclase with PAS/PAC sensor Ping_0273 199 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944923 Common - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Ping_1168 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 119945207 Common - sulfur oxidation protein of DsrC family protein Ping_1471 60 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 119946820 Common - methyltransferase of 50S ribosomal subunit protein L11 Ping_3214 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 119947127 Common - ribosomal protein S10 Ping_3525 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 119943915 Common - hypothetical protein Ping_0122 4 None None None 119945977 Nonpathogen - hypothetical protein Ping_2317 1 None None None 119943840 Common - taurine ABC transporter, periplasmic binding protein Ping_0047 78 COG4521 TauA, ABC-type taurine transport system, periplasmic component Inorganic ion transport and metabolism 119946139 Common - chaperonin Cpn10, GroES, small subunit of GroESL Ping_2494 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 119945352 Common - Integrase, catalytic region Ping_1638 146 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944968 Common - hydrogenase, NADP-reducing subunit C Ping_1217 164 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 119944377 Common - hypothetical protein DUF710 Ping_0604 43 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 119946525 Common - putative glutathione S-transferase YghU Ping_2902 98 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119944841 Common - maf protein Ping_1083 192 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 119946013 Common - hypothetical protein Ping_2356 8 None None None 119944722 Common - hypothetical protein Ping_0962 40 COG2915 COG2915, Uncharacterized protein involved in purine metabolism General function prediction only 119945617 Common asnC asparaginyl-tRNA synthetase Ping_1926 200 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 119944821 Common - pseudouridine synthase Ping_1063 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 119945115 Common - envelope stress induced periplasmic protein, Spy-related Ping_1376 12 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 119945245 Common - ABC transporter ATP-binding protein Ping_1514 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 119946587 Common - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Ping_2966 169 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 119945676 Common - Tfp pilus assembly protein FimV-like protein Ping_1992 16 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 119943900 Common - type II secretion system protein N Ping_0107 10 None None None 119944205 Common - putative polysaccharide biosynthesis protein Ping_0426 115 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 119944771 Common - ABC transporter ATP-binding protein Ping_1013 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 119946301 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_2669 177 COG0583 LysR, Transcriptional regulator Transcription 119945469 Nonpathogen - hypothetical protein Ping_1767 1 None None None 119945776 Common - transcriptional regulator, Fis family protein Ping_2111 31 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 119945831 Common - molybdopterin-guanine dinucleotide biosynthesis protein A Ping_2171 5 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 119947112 Common - ribosomal protein S8 Ping_3510 235 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 119946047 Common - filamentous haemagglutinin family outer membrane protein Ping_2394 134 None None None 119945545 Common - hypothetical protein Ping_1849 58 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 119945580 Common - DNA polymerase III, epsilon subunit Ping_1885 186 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 119945266 Common - transposase, IS4 Ping_1538 14 None None None 119944471 Common - OmpW family protein Ping_0700 72 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 119945800 Common - hypothetical protein Ping_2137 7 None None None 119944613 Common - UBA/THIF-type NAD/FAD binding protein Ping_0852 170 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 119946669 Common - hypothetical protein Ping_3049 5 None None None 119946182 Common - monooxygenase protein, putative Ping_2542 71 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 119943970 Common - hypothetical protein Ping_0183 6 None None None 119947040 Common - elongation factor Tu Ping_3437 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 119945257 Common - hypothetical protein Ping_1527 42 COG3651 COG3651, Uncharacterized protein conserved in bacteria Function unknown 119943816 Common - hypothetical protein DUF1305 Ping_0022 33 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 119947050 Common - ribosomal protein L7/L12 Ping_3447 215 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 119945394 Common - hypothetical protein Ping_1683 22 None None None 119944861 Common - SEC-C motif domain protein Ping_1103 103 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 119944305 Common - Mg/Co transporter CBS domain-containing protein Ping_0532 219 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 119945136 Common - CRISPR-associated protein, Csy3 family protein Ping_1399 21 None None None 119945821 Common - Glutathione S-transferase, C-terminal domain Ping_2161 101 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119945199 Common - multiple antibiotic resistance (MarC)-related proteins Ping_1463 144 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 119946910 Common - tyrosine recombinase XerD Ping_3304 232 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119947009 Common - hypothetical protein Ping_3406 3 None None None 119946086 Common - Exodeoxyribonuclease I Ping_2436 51 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 119943986 Common - ATP-dependent DNA helicase RecQ Ping_0199 233 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 119944330 Common - thiol:disulfide interchange protein DsbA Ping_0557 58 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 119944154 Common - S-adenosylmethionine decarboxylase Ping_0374 2 None None None 119944225 Nonpathogen - hypothetical protein Ping_0448 1 None None None 119943854 Common cyaA adenylate cyclase Ping_0061 25 COG3072 CyaA, Adenylate cyclase Nucleotide transport and metabolism 119946968 Nonpathogen - hypothetical protein Ping_3363 1 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 119944399 Common - Prephenate dehydratase Ping_0627 210 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 119946862 Common - L-serine dehydratase 1 Ping_3256 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 119945462 Common - 2'-5' RNA ligase Ping_1760 50 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 119947219 Common glpX fructose 1,6-bisphosphatase II Ping_3617 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 119946675 Nonpathogen - hypothetical protein Ping_3056 5 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 119944685 Common - aerobic respiration control sensor protein ArcB Ping_0924 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119946354 Common - glucose-specific PTS system IIBC components Ping_2725 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 119945445 Common - Glutathione S-transferase, C-terminal domain Ping_1742 24 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119945509 Common - hypothetical protein Ping_1813 5 None None None 119944661 Common - lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Ping_0900 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 119945419 Common - Antibiotic biosynthesis monooxygenase Ping_1714 7 COG1359 COG1359, Uncharacterized conserved protein Function unknown 119947069 Common - membrane serine peptidase Ping_3467 45 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 119947113 Common - ribosomal protein S14 Ping_3511 208 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 119945989 Common - hypothetical protein Ping_2330 4 COG5475 COG5475, Uncharacterized small protein Function unknown 119943945 Common - type IV pilus assembly protein PilM Ping_0158 87 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 119947143 Common - hypothetical protein Ping_3541 13 COG2930 COG2930, Uncharacterized conserved protein Function unknown 119944339 Common pntA NAD(P) transhydrogenase subunit alpha Ping_0566 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 119944560 Common - hypothetical protein Ping_0797 29 None None None 119946520 Common - Uncharacterised conserved protein UCP006287 Ping_2897 19 COG3112 COG3112, Uncharacterized protein conserved in bacteria Function unknown 119945200 Common - trigger factor Ping_1464 215 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 119943980 Common - diacylglycerol kinase Ping_0193 92 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 119945644 Common - ABC sugar transporter extracellular solute-binding protein, family 1 Ping_1956 68 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119946564 Nonpathogen - hypothetical protein Ping_2943 1 None None None 119946455 Common - Mg2+ transporter protein, CorA family protein Ping_2830 89 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 119945594 Common - phage integrase family protein Ping_1900 205 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 119945736 Common - nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein Ping_2065 38 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119947126 Common - ribosomal protein L3 Ping_3524 234 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 119945483 Nonpathogen - hypothetical protein Ping_1784 1 None None None 119944748 Common - short-chain dehydrogenase/reductase SDR Ping_0989 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 119946217 Nonpathogen - hypothetical protein Ping_2577 1 None None None 119946835 Common - tRNA/rRNA methyltransferase (SpoU) Ping_3229 191 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 119947316 Common - branched-chain amino acid transport Ping_3723 21 COG1687 AzlD, Predicted branched-chain amino acid permeases (azaleucine resistance) Amino acid transport and metabolism 119944126 Common - D-ribose transporter ATP binding protein Ping_0341 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 119946216 Common - membrane-flanked domain Ping_2576 17 COG3428 COG3428, Predicted membrane protein Function unknown 119947022 Common - ribosomal protein S6 Ping_3419 198 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 119945709 Common - putative endoribonuclease L-PSP Ping_2029 184 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 119945956 Common - rRNA (guanine-N(2)-)-methyltransferase Ping_2296 103 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 119945951 Common - diguanylate cyclase with PAS/PAC sensor Ping_2291 181 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119947269 Common - Integrase, catalytic region Ping_3668 141 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947255 Common - hypothetical protein DUF469 Ping_3653 22 COG3171 COG3171, Uncharacterized protein conserved in bacteria Function unknown 119945731 Common - pyrimidine 5'-nucleotidase Ping_2059 50 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 119945036 Common - hypothetical protein DUF1212 Ping_1290 54 COG2966 COG2966, Uncharacterized conserved protein Function unknown 119944714 Common - universal stress protein containing UspA domain Ping_0954 33 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119945438 Common - hypothetical protein Ping_1735 9 None None None 119944328 Common - carbohydrate-binding CenC domain protein Ping_0555 19 None None None 119944011 Common - regulator of information in SirA family protein Ping_0225 93 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 119946419 Common - Xanthine/uracil/vitamin C permease Ping_2793 135 COG2252 COG2252, Permeases General function prediction only 119945172 Nonpathogen - hypothetical protein Ping_1436 1 None None None 119944487 Common - crossover junction endodeoxyribonuclease RuvC Ping_0716 196 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 119944773 Common - hypothetical protein DUF1458 Ping_1015 39 COG3360 COG3360, Uncharacterized conserved protein Function unknown 119945067 Common - transcriptional regulator, BadM/Rrf2 family protein Ping_1323 160 COG1959 COG1959, Predicted transcriptional regulator Transcription 119944390 Common - hypothetical protein Ping_0618 17 None None None 119947098 Common - tRNA guanosine-2'-O-methyltransferase Ping_3496 199 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 119944018 Common - bifunctional argininosuccinate lyase/N-acetylglutamate synthase Ping_0232 233 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 119945006 Common - Gas vesicle synthesis GvpLGvpF Ping_1258 17 None None None 119946350 Common - hypothetical protein Ping_2721 22 COG2926 COG2926, Uncharacterized protein conserved in bacteria Function unknown 119947194 Common - surface presentation of antigens (SPOA) protein Ping_3592 116 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 119947092 Common - sodium/proline symporter Ping_3490 178 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 119944069 Common - selenophosphate synthase Ping_0284 164 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 119945243 Common - transposase and inactivated derivative Ping_1512 23 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 119945269 Nonpathogen - hypothetical protein Ping_1542 4 None None None 119947080 Common pyrE orotate phosphoribosyltransferase Ping_3478 135 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 119944733 Common - sucrose-6-phosphate hydrolase Ping_0974 53 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 119944787 Common - histidine ammonia-lyase Ping_1029 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 119944066 Common - sensor histidine kinase with ATPase domain Ping_0281 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945382 Common - 3-isopropylmalate dehydratase, small subunit Ping_1670 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 119946359 Common - diguanylate cyclase/phosphodiesterase Ping_2730 181 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119943836 Common - pantetheine-phosphate adenylyltransferase Ping_0043 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 119945060 Common - 6-phosphofructokinase Ping_1316 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 119946083 Common - ABC glutamine transporter extracellular solute-binding protein, family 3 Ping_2432 155 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119946894 Common - Rhomboid family protein Ping_3288 49 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 119947293 Common - RarD protein, DMT superfamily transporter Ping_3697 99 COG2962 RarD, Predicted permeases General function prediction only 119946008 Common - hypothetical protein Ping_2350 31 None None None 119944552 Common - fused dTDP-4-dehydrorhamnose reductase and 3-beta hydroxysteroid dehydrogenase/isomerase Ping_0789 196 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119946056 Common - phosphate uptake regulator, PhoU Ping_2405 185 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 119944314 Common - MscS Mechanosensitive ion channel Ping_0541 196 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119945190 Common - sulfatase Ping_1454 60 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 119946192 Nonpathogen - Methyl-accepting chemotaxis protein containing 2 PAS and MCP domains Ping_2552 5 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 119946266 Common - transcriptional regulator for RecA Ping_2629 66 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 119946657 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_3036 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119947178 Common flgD flagellar basal body rod modification protein Ping_3576 105 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 119944755 Common - Protein of unknown function DUF1722 Ping_0997 62 COG3272 COG3272, Uncharacterized conserved protein Function unknown 119946888 Common - translation elongation factor P Ping_3282 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 119945451 Common - gas vesicle synthesis protein GvpA Ping_1748 22 None None None 119946165 Nonpathogen - hypothetical protein Ping_2525 1 None None None 119946123 Nonpathogen - hypothetical protein Ping_2475 1 None None None 119945097 Common - putative monovalent cation/H+ antiporter subunit E Ping_1355 92 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 119944290 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_0516 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946051 Common - methylmalonate-semialdehyde dehydrogenase Ping_2399 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119946732 Common - peptidylprolyl isomerase, FKBP-type Ping_3116 144 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 119944247 Common - ATP synthase F1, H+-transporting two-sector ATPase gamma subunit Ping_0471 153 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 119944358 Common - ATP-dependent helicase HrpB Ping_0585 134 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 119944024 Common - hypothetical protein DUF511 Ping_0238 17 COG2958 COG2958, Uncharacterized protein conserved in bacteria Function unknown 119944233 Common - glycosyl transferase, group 1 Ping_0456 102 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 119944832 Common - hypothetical protein Ping_1074 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 119944326 Common - maltoporin Ping_0553 21 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 119946893 Common - hypothetical protein UPF0066 Ping_3287 95 COG1720 COG1720, Uncharacterized conserved protein Function unknown 119945761 Common - sn-glycerol-3-phosphate transport system, binding protein inner membrane component Ping_2094 155 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 119944342 Common - transcriptional regulator (GntR family) with HTH domain Ping_0569 194 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 119945877 Common - ribosomal protein L35 Ping_2217 174 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 119946649 Common - hypothetical protein DUF493 Ping_3028 49 COG2921 COG2921, Uncharacterized conserved protein Function unknown 119945398 Common pfaD polyunsaturated fatty acid synthase PfaD Ping_1687 24 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 119944696 Common - hypothetical protein Ping_0935 18 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 119945160 Common - protein disulfide isomerase NosL family protein Ping_1424 34 COG4314 NosL, Predicted lipoprotein involved in nitrous oxide reduction Energy production and conversion 119947087 Common - glutamine synthetase, type III Ping_3485 167 COG3968 COG3968, Uncharacterized protein related to glutamine synthetase General function prediction only 119947195 Common fliP flagellar biosynthesis protein FliP Ping_3593 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 119946834 Common - protein of unknown function DUF335, SprT Ping_3228 26 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 119944576 Common - preprotein translocase, SecG subunit Ping_0814 29 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 119946853 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_3247 167 COG0583 LysR, Transcriptional regulator Transcription 119945254 Nonpathogen - hypothetical protein Ping_1524 1 None None None 119947077 Common - Secretion protein HlyD-like protein Ping_3475 172 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119946658 Common - hypothetical protein DUF328 Ping_3037 89 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 119944663 Common - protein of unknown function DUF343 Ping_0902 84 COG2835 COG2835, Uncharacterized conserved protein Function unknown 119946526 Common - transcriptional regulator of TetR family protein Ping_2903 81 COG1309 AcrR, Transcriptional regulator Transcription 119945628 Nonpathogen - hypothetical protein Ping_1939 1 None None None 119945940 Common - hypothetical protein Ping_2280 4 None None None 119945391 Common - ABC transporter ATP-binding protein Ping_1680 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 119945385 Nonpathogen - hypothetical protein Ping_1674 1 None None None 119946975 Common - hemolysin Ping_3370 219 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 119946819 Common - hypothetical protein Ping_3213 10 None None None 119945542 Common - SMC domain protein Ping_1846 23 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 119946992 Common - hypothetical protein Ping_3387 6 None None None 119947032 Common - peptide chain release factor 2 Ping_3429 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 119946944 Common - threonine dehydratase, biosynthetic Ping_3338 219 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 119945582 Common - transcriptional regulator of LysR family protein Ping_1887 117 COG0583 LysR, Transcriptional regulator Transcription 119944110 Common - Exopolysaccharide biosynthesis protein-like protein Ping_0325 7 COG3955 COG3955, Exopolysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 119943881 Common - PTS system, mannitol-specific IIABC protein Ping_0088 64 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 119945440 Common - putative cytochrome c oxidase, subunit I Ping_1737 36 COG5473 COG5473, Predicted integral membrane protein Function unknown 119946626 Common - ABC transporter ATP-binding protein Ping_3005 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 119946877 Common - isoleucyl-tRNA synthetase Ping_3271 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119946797 Common - thioredoxin Ping_3190 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 119945237 Common - cysteine desulfurases, SufS subfamily protein Ping_1505 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 119944587 Common - polynucleotide phosphorylase/polyadenylase Ping_0825 243 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 119946349 Common - thiol:disulfide interchange protein DsbA Ping_2720 82 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 119944119 Common - lipopolysaccharide heptosyltransferase II Ping_0334 101 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 119944764 Common - hypothetical protein Ping_1006 36 None None None 119945658 Common - DNA topoisomerase I Ping_1971 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 119944919 Common - Integrase, catalytic region Ping_1164 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 119946446 Common - ABC transporter for amino acids ATP-binding protein Ping_2821 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 119946202 Common - hypothetical protein Ping_2562 30 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 119945035 Common - hypothetical protein Ping_1289 6 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 119945948 Common - Pyridoxal-dependent decarboxylase Ping_2288 120 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 119946131 Nonpathogen - 6-carboxyhexanoate-CoA ligase Ping_2483 1 None None None 119944413 Common - GTP-binding protein Era Ping_0641 227 COG1159 Era, GTPase General function prediction only 119945180 Common - NusB antitermination factor Ping_1444 198 COG0781 NusB, Transcription termination factor Transcription 119947133 Common - Carboxylesterase Ping_3531 102 COG0627 COG0627, Predicted esterase General function prediction only 119946688 Common - glycogen debranching enzyme GlgX Ping_3070 174 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 119944417 Common - Glycerate kinase Ping_0645 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 119945910 Common - succinyl-CoA synthetase, beta subunit Ping_2250 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 119944141 Common - thiamine biosynthesis protein ThiC Ping_0360 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 119947231 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ping_3629 242 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 119944045 Nonpathogen - hypothetical protein Ping_0259 1 None None None 119946482 Common - hypothetical protein Ping_2857 77 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 119945631 Common - Stress responsive alpha-beta barrel domain protein Ping_1942 13 None None None 119945490 Common - Glutathione S-transferase, N-terminal domain Ping_1792 78 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119946430 Common - transcriptional regulator, periplasmic binding protein of LacI family protein Ping_2804 100 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119944836 Common - septum site-determining protein MinD Ping_1078 140 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 119946759 Common - hypothetical protein Ping_3152 14 COG4676 COG4676, Uncharacterized protein conserved in bacteria Function unknown 119946329 Common - putative transposase Ping_2700 30 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944002 Common - 2-isopropylmalate synthase Ping_0216 219 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 119946375 Common - phosphonoacetaldehyde hydrolase Ping_2749 27 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 119945055 Common - diheme-containing protein c4 Ping_1310 59 COG2863 COG2863, Cytochrome c553 Energy production and conversion 119945272 Common - hypothetical protein DUF583 Ping_1545 90 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 119944188 Nonpathogen - hypothetical protein Ping_0408 1 None None None 119945661 Common - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase Ping_1974 74 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 119944433 Common - PaaX domain protein, C-terminal domain Ping_0661 32 COG3327 PaaX, Phenylacetic acid-responsive transcriptional repressor Transcription 119944705 Common - hypothetical protein DUF692 Ping_0944 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 119946471 Common - sulfotransferase containing TPR domain Ping_2846 40 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 119945429 Common - 2-dehydro-3-deoxyphosphoheptonate aldolase Ping_1726 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 119946334 Common - hypothetical protein Ping_2705 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 119946993 Common - hypothetical protein Ping_3388 8 None None None 119944857 Common - exsB protein Ping_1099 177 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 119943983 Common - elongation factor Ping_0196 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 119945405 Common - hypothetical protein Ping_1698 11 None None None 119945652 Common - amidophosphoribosyltransferase Ping_1965 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 119943823 Common - pentapeptide repeat protein Ping_0029 97 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 119946030 Common - transcriptional activator containing TENA/THI-4 domain Ping_2374 76 COG0819 TenA, Putative transcription activator Transcription 119946492 Common - uridine phosphorylase Ping_2868 96 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 119946870 Common - hypothetical protein DUF152 Ping_3264 177 COG1496 COG1496, Uncharacterized conserved protein Function unknown 119945642 Common - alpha amylase, catalytic region Ping_1954 106 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119945766 Common - SMP-30/Gluconolaconase/LRE domain protein Ping_2099 73 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 119944274 Common - hypothetical protein Ping_0500 8 None None None 119944271 Common - Methyltransferase type 11 Ping_0497 57 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 119946412 Nonpathogen - hypothetical protein Ping_2786 1 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 119945549 Common tdh L-threonine 3-dehydrogenase Ping_1853 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 119946322 Common - Heat shock protein 70 Ping_2692 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 119945568 Common - Uncharacterized protein UPF0065 Ping_1873 72 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 119945812 Common - diguanylate cyclase Ping_2150 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119946066 Nonpathogen - hypothetical protein Ping_2415 1 None None None 119946098 Common - Superoxide dismutase Ping_2448 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 119946562 Common - hypothetical protein Ping_2941 9 None None None 119943815 Common - hypothetical protein DUF879 Ping_0021 47 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 119943979 Common dnaB replicative DNA helicase DnaB Ping_0192 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 119947185 Common - flagellar hook-length control protein Ping_3583 22 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 119944304 Common - apolipoprotein N-acyltransferase Ping_0531 163 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 119946423 Common - HflC protein Ping_2797 141 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 119946720 Nonpathogen - hypothetical protein Ping_3104 1 None None None 119946950 Common - MotA/TolQ/ExbB proton channel Ping_3344 151 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 119944891 Common - transcriptional regulator, Fis family protein Ping_1135 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 119946003 Common - GCN5-related N-acetyltransferase Ping_2345 143 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 119947254 Common - hypothetical protein Ping_3652 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 119946478 Nonpathogen - hypothetical protein Ping_2853 7 None None None 119946930 Common - CMP/dCMP deaminase, zinc-binding Ping_3324 219 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 119944161 Common - hypothetical protein Ping_0381 106 COG0393 COG0393, Uncharacterized conserved protein Function unknown 119944257 Common pilC type II secretion system protein, type IV pilus biogenesis protein PilC Ping_0481 142 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 119944886 Common - channel protein, hemolysin III family protein Ping_1130 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 119945307 Common - CRISPR-associated protein Cas5 family protein Ping_1590 35 None None None 119944992 Common - hypothetical protein DUF336 Ping_1243 20 COG4702 COG4702, Uncharacterized conserved protein Function unknown 119944226 Common - glycosyl transferase, family 2 Ping_0449 121 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 119947212 Common - protein of unknown function DUF37 Ping_3610 185 COG0759 COG0759, Uncharacterized conserved protein Function unknown 119944608 Nonpathogen - hypothetical protein Ping_0846 2 None None None 119946906 Common - iron and zinc efflux system protein Ping_3300 213 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 119944614 Common - ketol-acid reductoisomerase Ping_0853 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 119945864 Common - fused transcription-repair coupling factor and superfamily II helicase Ping_2204 226 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 119946846 Common - DNA mismatch repair protein MutL Ping_3240 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 119944355 Common - poly(A) polymerase Ping_0582 210 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 119945589 Nonpathogen - hypothetical protein Ping_1894 3 None None None 119944168 Common - cAMP-regulatory protein Ping_0388 176 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 119946868 Common - aldo/keto reductase Ping_3262 192 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 119944444 Common - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ping_0672 195 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 119943869 Common - DNA protecting protein DprA Ping_0076 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 119943939 Nonpathogen - hypothetical protein Ping_0152 1 None None None 119944864 Common - Sel1 domain and tetratricopeptide repeat-containing protein Ping_1106 111 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 119944957 Common - purine nucleoside phosphorylase Ping_1206 60 COG1683 COG1683, Uncharacterized conserved protein Function unknown 119945907 Common - hypothetical protein Ping_2247 23 None None None 119946105 Common - phospholipase D/Transphosphatidylase Ping_2455 153 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 119944656 Common - hypothetical protein Ping_0895 3 None None None 119947317 Common - AzlC family protein Ping_3724 104 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 119945126 Common - copper resistance protein CopC Ping_1388 34 COG2372 CopC, Uncharacterized protein, homolog of Cu resistance protein CopC General function prediction only 119944527 Common - deoxycytidine triphosphate deaminase Ping_0756 154 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 119946572 Common - exodeoxyribonuclease VII, large subunit Ping_2951 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 119944104 Common - twin-arginine translocation protein, TatB subunit Ping_0319 34 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 119946633 Common - integration host factor, beta subunit Ping_3012 202 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 119946252 Common - DNA-directed RNA polymerase subunit alpha Ping_2614 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 119946646 Common - ammonium transporter Ping_3025 202 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 119946286 Common - Integrase, catalytic region Ping_2652 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 119946291 Common - hypothetical protein Ping_2658 5 None None None 119945701 Common - galactose mutarotase Ping_2018 92 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 119944629 Common - efflux transporter, RND family, MFP subunit Ping_0868 118 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119945747 Common - transcriptional regulator of MarR family protein Ping_2077 81 COG1846 MarR, Transcriptional regulators Transcription 119943981 Common - Glycerol-3-phosphate O-acyltransferase Ping_0194 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 119945802 Common - CheY-like chemotaxis protein, response regulator receiver Ping_2139 168 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119946949 Common - ABC transporter for cobalamin/Fe3+-siderophores ATP-binding protein Ping_3343 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 119945484 Common - SOUL heme-binding protein Ping_1785 28 None None None 119945422 Common - LGFP repeat protein Ping_1717 12 COG5479 COG5479, Uncharacterized protein potentially involved in peptidoglycan biosynthesis Cell envelope biogenesis, outer membrane 119946640 Common - cytochrome c-type biogenesis protein CcmF Ping_3019 137 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 119946918 Common - phosphate acetyltransferase Ping_3312 177 COG0280 Pta, Phosphotransacetylase Energy production and conversion 119945088 Common - transposase and inactivated derivative Ping_1345 27 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944783 Common - uroporphyrin-III C-methyltransferase Ping_1025 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 119944973 Common - putative signal-transduction protein with CBS domains Ping_1223 66 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 119946967 Common - sensor histidine kinase with ATPase domain, two fused Ping_3362 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945716 Common - UDP-galactopyranose mutase Ping_2040 71 COG0562 Glf, UDP-galactopyranose mutase Cell envelope biogenesis, outer membrane 119944280 Common thyA thymidylate synthase Ping_0506 136 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 119945854 Common sapC peptide ABC transporter, protein inner membrane binding component SapC Ping_2194 203 COG4171 SapC, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 119946464 Common - YbaK/prolyl-tRNA synthetase associated region Ping_2839 29 COG2606 EbsC, Uncharacterized conserved protein Function unknown 119946569 Common - phage integrase family protein Ping_2948 10 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119944797 Common - heat shock protein DnaJ domain protein Ping_1039 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 119944203 Common - two component, sigma54 specific, transcriptional regulator, Fis family protein Ping_0424 180 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119946719 Nonpathogen - pilin inverting protein PivNM-1B Ping_3103 1 None None None 119946981 Common - pyruvate carboxylase subunit B Ping_3376 198 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 119944989 Common - Citrate transporter Ping_1240 148 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 119945818 Nonpathogen - hypothetical protein Ping_2157 1 None None None 119944428 Common - enoyl-CoA hydratase Ping_0656 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 119946595 Common - uridylate kinase Ping_2974 231 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 119944505 Common - electron transport complex, RnfABCDGE type, G subunit Ping_0734 58 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 119946384 Common - MgtE integral membrane region Ping_2758 149 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 119943990 Common - (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Ping_0203 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 119947052 Common - ribosomal protein L1 Ping_3449 245 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 119944407 Common - transcriptional regulator, MerR family protein Ping_0635 34 None None None 119944673 Common - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Ping_0912 193 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 119946798 Common - ATP-dependent RNA helicase RhlB Ping_3191 230 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119944250 Common - Citrate transporter Ping_0474 51 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 119945138 Common - fumarylacetoacetate (FAA) hydrolase Ping_1402 176 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 119945633 Common - mercuric transport protein periplasmic component Ping_1945 15 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 119947171 Common - flagellar hook-associated protein FlgK Ping_3569 124 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 119944148 Common - Lytic transglycosylase, catalytic Ping_0367 175 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 119945493 Common - hypothetical protein Ping_1795 5 None None None 119944681 Common - Methylthioadenosine nucleosidase Ping_0920 87 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 119946812 Common - aspartate-semialdehyde dehydrogenase Ping_3206 197 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 119945098 Common mnhE monovalent cation/proton antiporter, subunit of MnhE/PhaE family protein Ping_1356 11 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 119944591 Common - CreA family protein Ping_0829 48 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 119945336 Common - HAD-superfamily subfamily IIA hydrolase like protein Ping_1620 95 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 119947140 Common metN DL-methionine transporter ATP-binding subunit Ping_3538 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 119944646 Nonpathogen - hypothetical protein Ping_0885 1 None None None 119947244 Common - porphobilinogen deaminase Ping_3642 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 119945223 Common - uridine kinase Ping_1489 82 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 119945988 Nonpathogen - hypothetical protein Ping_2329 1 None None None 119945281 Nonpathogen - hypothetical protein Ping_1557 2 None None None 119947209 Common - cytochrome c biogenesis protein, transmembrane region Ping_3607 119 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 119946701 Common - diguanylate cyclase Ping_3083 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119945189 Common - MscS Mechanosensitive ion channel Ping_1453 207 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119945901 Common - thiamine-monophosphate kinase Ping_2241 198 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 119944910 Common - hypothetical protein Ping_1154 13 COG4701 COG4701, Uncharacterized protein conserved in bacteria Function unknown 119945524 Common - permease Ping_1828 100 COG0701 COG0701, Predicted permeases General function prediction only 119944324 Common - hypothetical protein Ping_0551 4 None None None 119946156 Nonpathogen - hypothetical protein Ping_2516 2 None None None 119943888 Common - RNA-binding S4 domain protein Ping_0095 107 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 119946502 Common - pyruvate kinase Ping_2879 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 119945191 Common - adenosine deaminase Ping_1455 107 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 119945791 Common - peptidase M19, renal dipeptidase Ping_2127 98 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 119945780 Common - Malate/L-lactate dehydrogenase Ping_2116 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 119947321 Common - hypothetical protein Ping_3728 14 COG5482 COG5482, Uncharacterized conserved protein Function unknown 119944761 Common - Cyclopropane-fatty-acyl-phospholipid synthase Ping_1003 128 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 119944059 Common - hypothetical protein Ping_0274 9 COG4519 COG4519, Uncharacterized protein conserved in bacteria Function unknown 119945212 Common merR transcriptional regulator MetR, substrate-binding, LysR family protein Ping_1476 180 COG0583 LysR, Transcriptional regulator Transcription 119946695 Common - diguanylate cyclase Ping_3077 181 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119946904 Common - hypothetical protein DUF1653 Ping_3298 35 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 119945798 Nonpathogen - hypothetical protein Ping_2135 1 None None None 119945668 Common - ATP-dependent protease La Ping_1981 110 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 119944298 Common - ribosomal protein L21 Ping_0525 214 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 119944628 Common - iron-sulfur cluster assembly accessory protein Ping_0867 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 119946236 Common - multiple antibiotic resistance (MarC)-related proteins Ping_2597 136 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 119946933 Common - Endonuclease/exonuclease/phosphatase Ping_3327 32 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 119944732 Common scrR sucrose operon repressor ScrR Ping_0973 129 COG1609 PurR, Transcriptional regulators Transcription 119944261 Nonpathogen - hypothetical protein Ping_0486 2 None None None 119945230 Nonpathogen - hypothetical protein Ping_1496 1 None None None 119944331 Common - glycoside hydrolase, family 16 Ping_0558 47 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 119945899 Common - geranyltranstransferase Ping_2239 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 119946391 Common - Zn-dependent enzyme, member of deacylase/carboxypeptidase family protein Ping_2765 11 COG3608 COG3608, Predicted deacylase General function prediction only 119946457 Common - ABC polar amino acid transporter inner membrane protein Ping_2832 167 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 119945607 Common htpX heat shock protein HtpX Ping_1916 191 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 119943832 Nonpathogen - hypothetical protein Ping_0038 1 None None None 119944502 Common - hypothetical protein DUF1456 Ping_0731 31 COG4807 COG4807, Uncharacterized protein conserved in bacteria Function unknown 119945992 Nonpathogen - hypothetical protein Ping_2333 1 None None None 119946059 Common - ABC phosphate transporter inner membrane protein, PstC-like protein Ping_2408 231 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 119946214 Common - stress protein, tellurium resistance protein Ping_2574 20 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119945351 Common - hypothetical protein Ping_1637 7 None None None 119945782 Common - transcriptional regulator (GntR family) with HTH domain Ping_2118 132 COG1802 GntR, Transcriptional regulators Transcription 119947018 Nonpathogen - hypothetical protein Ping_3415 1 None None None 119944943 Common - Rare lipoprotein B Ping_1190 28 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 119945323 Common - peptide chain release factor 1 Ping_1607 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 119944877 Common - diguanylate cyclase Ping_1121 180 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119945750 Common - NADPH-dependent FMN reductase Ping_2081 93 COG0431 COG0431, Predicted flavoprotein General function prediction only 119945255 Common - hypothetical protein Ping_1525 55 COG2862 COG2862, Predicted membrane protein Function unknown 119945953 Common - thioredoxin family protein Ping_2293 157 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 119945808 Nonpathogen - hypothetical protein Ping_2146 1 None None None 119943902 Common - electron transport protein SCO1/SenC Ping_0109 98 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 119946136 Common - helicase DEAD/DEAH box Ping_2490 98 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 119946547 Common SucB 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component Ping_2926 196 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 119944034 Common - PKD domain containing protein Ping_0248 115 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 119945108 Common - copper/silver resistance outer membrane protein Ping_1368 40 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 119946324 Common ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor Ping_2695 139 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 119945214 Common - phospho-2-dehydro-3-deoxyheptonate aldolase Ping_1478 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 119945813 Common - dihydroxy-acid dehydratase Ping_2151 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 119944932 Common - LppC family lipoprotein Ping_1177 42 COG3107 LppC, Putative lipoprotein General function prediction only 119946928 Common - hypothetical protein Ping_3322 5 None None None 119947124 Common - Ribosomal protein L25/L23 Ping_3522 210 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 119945205 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Ping_1469 168 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 119946580 Common - Arylesterase Ping_2959 101 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 119945292 Common - transporter major facilitator superfamily MFS_1 Ping_1574 80 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 119945439 Common - hypothetical protein DUF399 Ping_1736 27 COG3016 PhuW, Uncharacterized iron-regulated protein Function unknown 119944518 Common - Na(+)-translocating NADH-quinone reductase subunit B Ping_0747 76 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 119945066 Common - RNA methyltransferase, TrmH family, group 1 Ping_1322 159 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 119943872 Common - methionyl-tRNA formyltransferase Ping_0079 220 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 119944772 Common - long-chain-fatty-acid--CoA ligase Ping_1014 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119946972 Common - ribosomal protein S16 Ping_3367 207 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 119944322 Common - ABC oligopeptide/dipeptide transporter ATP-binding protein Ping_0549 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 119946585 Common - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Ping_2964 161 COG1043 LpxA, Acyl- acyl carrier protein 119945611 Common - ABC amino acid transporter extracellular solute-binding protein, family 3 Ping_1920 173 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119944738 Common - sensor histidine kinase with ATPase domain, two fused Ping_0979 230 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945358 Common - phosphoribosyl-AMP cyclohydrolase Ping_1646 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 119947295 Common - Glutathione S-transferase, N-terminal domain Ping_3700 87 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119944873 Common - histidinol-phosphate aminotransferase Ping_1116 239 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 119944090 Common - alpha amylase, catalytic region Ping_0305 150 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119945247 Common - ABC polar amino acid transporter inner membrane protein Ping_1516 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119945891 Common - signalling sensor histidine kinase for the phosphate regulon, with PAS sensory domain Ping_2231 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 119945432 Common - isochorismatase hydrolase Ping_1729 82 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 119944450 Nonpathogen - hypothetical protein Ping_0678 1 None None None 119946081 Common - ABC polar amino acid transporter inner membrane protein Ping_2430 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119946622 Common - metal dependent phosphohydrolase Ping_3001 123 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 119946190 Common - diguanylate cyclase with PAS/PAC sensor Ping_2550 180 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944019 Common - carbonic anhydrase, family 3 Ping_0233 193 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 119946163 Common - type III restriction enzyme, res subunit Ping_2523 138 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 119945734 Common - hypothetical protein Ping_2063 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 119944829 Common - Chromosomal replication initiator, DnaA Ping_1071 162 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 119946555 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Ping_2934 49 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 119946264 Common - Alkaline phosphatase Ping_2627 86 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 119944554 Common - UDP-N-acetylglucosamine 2-epimerase Ping_0791 151 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 119947001 Common - 23S rRNA (Gm2251)-methyltransferase Ping_3396 235 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 119946674 Nonpathogen - hypothetical protein Ping_3055 1 None None None 119945150 Common - methylated-DNA--protein-cysteine methyltransferase Ping_1414 220 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 119945146 Common - phosphoglycolate phosphatase Ping_1410 197 COG0546 Gph, Predicted phosphatases General function prediction only 119946809 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_3203 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119946084 Common - hypothetical transmembrane protein DUF6 Ping_2433 22 None None None 119944246 Common - F0F1 ATP synthase subunit alpha Ping_0470 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 119944817 Common - glutamine amidotransferase of anthranilate synthase Ping_1059 231 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 119943989 Common hslJ heat shock protein HslJ Ping_0202 17 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 119943919 Common - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Ping_0129 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 119944612 Common - NAD-glutamate dehydrogenase Ping_0851 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 119946398 Common - Syd family protein Ping_2772 20 None None None 119944820 Common - Sua5/YciO/YrdC/YwlC family protein Ping_1062 174 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 119944942 Common - DNA polymerase III, delta subunit Ping_1189 67 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 119947012 Common - Alkaline phosphatase Ping_3409 85 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 119947304 Common - ABC transporter foramino acid ATP-binding protein Ping_3710 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 119944489 Common - Holliday junction DNA helicase RuvA Ping_0718 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 119946015 Common glk glucokinase Ping_2359 89 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 119944282 Common - phosphoserine aminotransferase Ping_0508 70 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 119945924 Common - hypothetical protein Ping_2264 21 None None None 119945820 Common - homocysteine S-methyltransferase Ping_2160 144 COG2040 MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Amino acid transport and metabolism 119944043 Nonpathogen - hypothetical protein Ping_0257 3 None None None 119944473 Common - cyanate lyase Ping_0702 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 119946802 Common - hypothetical protein DUF1255 Ping_3196 51 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 119943943 Common - Haloacid dehalogenase domain protein hydrolase Ping_0156 34 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 119946512 Common - hypothetical protein DUF1239 Ping_2889 5 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 119947228 Common - dTDP-glucose 4,6-dehydratase Ping_3626 37 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119945417 Common - phosphoesterase, PA-phosphatase related Ping_1712 31 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 119946749 Common - hypothetical protein Ping_3141 12 None None None 119944075 Common - ABC transporter substrate binding inner membrane protein Ping_0290 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 119945447 Common - malic enzyme aka malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) Ping_1744 180 COG0281 SfcA, Malic enzyme Energy production and conversion 119944464 Common - adenosine deaminase Ping_0692 98 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 119947067 Common - dTDP-glucose 4,6-dehydratase Ping_3465 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 119944965 Common - HoxW protein Ping_1214 14 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 119946287 Common - hypothetical protein Ping_2654 12 None None None 119946072 Common - ABC transporter for oligopeptide ATP binding protein Ping_2421 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 119945037 Common - hypothetical protein Ping_1291 41 COG3610 COG3610, Uncharacterized conserved protein Function unknown 119946352 Common - peptidase S1 and S6, chymotrypsin/Hap Ping_2723 28 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 119945486 Common - cytochrome bd ubiquinol oxidase, subunit I Ping_1787 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 119946070 Common - ABC transporter D-Ala-D-Ala-binding inner membrane protein Ping_2419 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119947226 Common - DNA-directed RNA polymerase, omega subunit Ping_3624 108 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 119945101 Common - putative monovalent cation/H+ antiporter subunit A Ping_1359 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 119945544 Common - hypothetical protein Ping_1848 8 None None None 119946005 Nonpathogen - hypothetical protein Ping_2347 2 None None None 119945030 Common - Hemerythrin HHE cation binding domain protein Ping_1284 12 COG3945 COG3945, Uncharacterized conserved protein Function unknown 119945328 Common - membrane protein DUF423 Ping_1612 57 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 119946185 Common - peptidase M24 Ping_2545 197 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 119945001 Common - gas vesicle synthesis protein GvpA Ping_1253 22 None None None 119944074 Common - ABC transporter extracellular solute-binding protein, family 5 Ping_0289 132 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 119944746 Common - sensor histidine kinase with ATPase domain Ping_0987 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 119946961 Common - 2-hydroxy-3-oxopropionate reductase Ping_3356 176 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 119944219 Common - capsular polysaccharide biosynthesis protein Ping_0441 90 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 119946530 Nonpathogen - hypothetical protein Ping_2907 3 None None None 119944081 Common - ABC arginine transporter extracellular solute-binding protein, family 3 Ping_0296 163 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119946831 Common - peptidase M23B Ping_3225 187 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 119944116 Common - glycosyl transferase, family 2 Ping_0331 38 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 119945110 Common - heavy metal efflux pump, CzcA family protein Ping_1370 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 119946494 Common - Stringent starvation protein B Ping_2870 65 COG2969 SspB, Stringent starvation protein B General function prediction only 119944824 Common - LrgA family protein Ping_1066 59 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 119944724 Common - hypothetical protein Ping_0964 5 None None None 119945729 Common - putative PTS IIA-like nitrogen-regulatory protein PtsN Ping_2057 61 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 119944849 Common - beta-ketoacyl synthase Ping_1091 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119946226 Common - ABC phosphate transporter periplasmic phosphate-binding protein Ping_2587 125 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 119945687 Common - glyceraldehyde-3-phosphate dehydrogenase Ping_2004 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 119946487 Common - phosphopentomutase Ping_2863 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 124021677 Common - DNA polymerase, beta domain protein region Ping_0760 3 COG1708 COG1708, Predicted nucleotidyltransferases General function prediction only 119945847 Common - carboxy-terminal protease Ping_2187 183 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 119945834 Common - periplasmic nitrate reductase, large subunit Ping_2174 185 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 119947026 Common - hypothetical protein Ping_3423 5 None None None 119946306 Common - NAD-dependent epimerase/dehydratase Ping_2674 84 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119944319 Common - peptide ABC transporter, protein inner membrane binding component Ping_0546 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119947285 Common - phosphonate metabolism PhnJ Ping_3689 45 COG3627 PhnJ, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 119945675 Common - Tfp pilus assembly protein FimV-like protein Ping_1988 15 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 119946822 Common - factor-for-inversion stimulation protein containing helix-turn-helix domain Ping_3216 98 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 119944367 Nonpathogen - hypothetical protein Ping_0594 3 None None None 119946601 Nonpathogen - hypothetical protein Ping_2980 1 None None None 119946973 Common - signal recognition particle protein Ping_3368 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 119944167 Common - ABC transporter for thiamin ATP-binding protein Ping_0387 249 COG3840 ThiQ, ABC-type thiamine transport system, ATPase component Coenzyme metabolism 119946037 Common - alpha-D-1,4-glucosidase Ping_2381 167 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119946881 Nonpathogen - hypothetical protein Ping_3275 1 None None None 119946886 Common - fumarate reductase, subunit C Ping_3280 23 COG3029 FrdC, Fumarate reductase subunit C Energy production and conversion 119944637 Common - hypothetical protein Ping_0876 8 None None None 119946109 Common - RimK domain protein ATP-grasp Ping_2459 103 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 119945157 Common - protein containing cysteine-rich domain Ping_1421 156 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 119943913 Nonpathogen - diverged AAA-family ATPase containing protein Ping_0120 3 None None None 119946726 Common - hypothetical protein Ping_3110 5 None None None 119945693 Common - ABC transporter substrate binding inner membrane protein Ping_2010 168 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 119946121 Nonpathogen - hypothetical protein Ping_2472 1 None None None 119944757 Common - transcriptional regulator Ping_0999 25 None None None 119944925 Common - hypothetical protein Ping_1170 59 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 119944341 Common hepA ATP-dependent helicase HepA Ping_0568 126 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 119943950 Common - Shikimate kinase Ping_0163 200 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 119944859 Common - ATP-dependent helicase HrpA Ping_1101 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 119947158 Common - Lipocalin family protein Ping_3556 64 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 119943893 Common - general secretion pathway protein G Ping_0100 105 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 119946196 Nonpathogen - hypothetical protein Ping_2556 1 None None None 119946336 Common - metallophosphoesterase Ping_2707 10 None None None 119946980 Common - oxaloacetate decarboxylase, beta subunit Ping_3375 56 COG1883 OadB, Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Energy production and conversion 119943856 Common - protein of unknown function DUF339 Ping_0063 46 COG2938 COG2938, Uncharacterized conserved protein Function unknown 119947003 Common - Cof-like hydrolase Ping_3398 117 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 119945162 Common - ABC transporter for copper ATP-binding protein Ping_1426 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 119944750 Nonpathogen - hypothetical protein Ping_0992 2 None None None 119944372 Common - putative SAM-dependent methyltransferase Ping_0599 29 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 119944332 Nonpathogen - hypothetical protein Ping_0559 2 None None None 119943801 Common - hypothetical protein Ping_0007 3 None None None 119947198 Common - flagellar biosynthetic protein FlhB Ping_3596 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 119945235 Common - aromatic ring hydroxylating enzyme Ping_1503 136 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 119945916 Common - succinate dehydrogenase, cytochrome b subunit Ping_2256 73 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 119945464 Common - hypothetical protein Ping_1762 8 None None None 119944108 Common - ubiquinone/menaquinone biosynthesis methyltransferases Ping_0323 221 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 119944806 Common - 4-hydroxythreonine-4-phosphate dehydrogenase Ping_1048 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 119946144 Common - hypothetical protein Ping_2500 12 None None None 119945304 Common - transcriptional regulator, Fis family protein Ping_1587 18 None None None 119944459 Common - thiol oxidoreductase containing 2 cytochrome c heme-binding sites Ping_0687 50 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 119946761 Common - short-chain dehydrogenase/reductase SDR Ping_3154 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 119946667 Common - putative oxygen-independent coproporphyrinogen III oxidase Ping_3046 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 119946663 Common - hypothetical protein Ping_3042 99 COG0762 COG0762, Predicted integral membrane protein Function unknown 119946698 Nonpathogen - hypothetical protein Ping_3080 3 None None None 119945313 Common - hypothetical protein Ping_1596 6 None None None 119946406 Common - dihydrolipoamide dehydrogenase E3 component of 3 enzyme complexes Ping_2780 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 119946400 Common - hypothetical protein Ping_2774 7 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944727 Common - DNA polymerase III subunit epsilon Ping_0968 127 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 119944731 Common - PTS system, sucrose-specific IIBC subunit Ping_0972 43 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 119946145 Common - CheB methylesterase Ping_2504 137 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 119945722 Common - phosphoribosylaminoimidazole carboxylase, catalytic subunit Ping_2048 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 119946753 Nonpathogen - hypothetical protein Ping_3146 2 None None None 119944178 Common - RDD domain containing protein Ping_0398 24 COG1714 COG1714, Predicted membrane protein/domain Function unknown 119943839 Common - transcriptional regulator (GntR family) with HTH domain Ping_0046 178 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 119944095 Common rpoD RNA polymerase sigma-70 factor RpoD Ping_0310 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 119945396 Common - polyunsaturated fatty acid synthase PfaB Ping_1685 42 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 119944198 Common - transcriptional regulator of LysR family protein Ping_0418 145 COG0583 LysR, Transcriptional regulator Transcription 119946314 Common - type III restriction enzyme, res subunit Ping_2683 159 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 119944382 Common - Ubiquinone biosynthesis visC protein Ping_0609 127 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 119944517 Common - Na(+)-translocating NADH-quinone reductase subunit A Ping_0746 40 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 119945773 Common - putative thiol-disulphide oxidoreductase DCC Ping_2108 20 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 119944716 Common - heat shock protein 90 Ping_0956 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 119944153 Common - hypothetical protein DUF541 Ping_0373 60 COG2968 COG2968, Uncharacterized conserved protein Function unknown 119945971 Common - hypothetical protein Ping_2311 7 None None None 119945985 Common - beta-Ig-H3/fasciclin Ping_2325 68 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 119947028 Common - ABC transporter substrate binding inner membrane protein Ping_3425 191 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 119945558 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase Ping_1862 120 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 119945749 Nonpathogen - hypothetical protein Ping_2079 2 None None None 119945473 Common - D-erythrose-4-phosphate dehydrogenase Ping_1771 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 119944193 Common - ABC polar amino acid transporter inner membrane protein Ping_0413 171 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119945073 Common - ferredoxin, 2Fe-2S type, ISC system Ping_1329 88 COG0633 Fdx, Ferredoxin Energy production and conversion 119944983 Common - universal stress protein containing UspA domain Ping_1234 21 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119946119 Nonpathogen - hypothetical protein Ping_2469 1 None None None 119944802 Common - hypothetical protein Ping_1044 22 COG5345 COG5345, Uncharacterized protein conserved in bacteria Function unknown 119945286 Nonpathogen - hypothetical protein Ping_1564 5 None None None 119944447 Common - stationary-phase survival protein SurE Ping_0675 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 119945603 Common - hypothetical protein Ping_1910 22 None None None 119947104 Common rpsM 30S ribosomal protein S13 Ping_3502 232 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 119947115 Common - ribosomal protein L24 Ping_3513 185 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 119944812 Common - intracellular septation protein A Ping_1054 92 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 119946112 Nonpathogen - hypothetical protein Ping_2462 2 None None None 119946836 Common - ribosomal-protein-alanine acetyltransferase Ping_3230 193 COG0456 RimI, Acetyltransferases General function prediction only 119944741 Common - pseudouridine synthase Ping_0982 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 119947279 Common - hypothetical protein Ping_3683 45 None None None 119945883 Common - Mammalian cell entry related domain protein Ping_2223 56 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 119946559 Common - hypothetical protein DUF81 Ping_2938 143 COG0730 COG0730, Predicted permeases General function prediction only 119944036 Nonpathogen - hypothetical protein Ping_0250 1 None None None 119946425 Common - GCN5-related N-acetyltransferase Ping_2799 43 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 119944435 Common - acriflavin resistance protein Ping_0663 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 119944703 Common - hypothetical protein Ping_0942 29 None None None 119946272 Common - gamma-glutamyl kinase Ping_2635 193 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 119945449 Common - sensor histidine kinase, PAS domain Ping_1746 222 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 119946096 Common - phosphoserine phosphatase SerB Ping_2446 151 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 119947151 Common - urea amidolyase related protein Ping_3549 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 119944047 Common - probable transposase Ping_0261 11 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947246 Common - O-acetylhomoserine/O-acetylserine sulfhydrylase Ping_3644 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 119946332 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Ping_2703 38 COG0546 Gph, Predicted phosphatases General function prediction only 119946999 Common ansA cytoplasmic asparaginase I Ping_3394 131 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 119944431 Common - beta-ketoadipyl CoA thiolase Ping_0659 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 119946954 Common - Alcohol dehydrogenase, zinc-binding domain protein Ping_3348 97 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 119944855 Common - cold-shock DNA-binding domain protein Ping_1097 180 COG1278 CspC, Cold shock proteins Transcription 119945618 Common - hypothetical protein Ping_1927 5 None None None 119946866 Common - ABC transporter ATP-binding protein, two fused Ping_3260 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 119943977 Common - O-succinylbenzoate-CoA synthase Ping_0190 43 COG1441 MenC, O-succinylbenzoate synthase Coenzyme metabolism 119945522 Common - small multidrug resistance protein Ping_1826 138 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 119947258 Common - malonate decarboxylase gamma subunit Ping_3656 25 None None None 119944594 Common - hypothetical protein Ping_0832 7 None None None 119946209 Common - phage integrase family protein Ping_2569 75 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 119945654 Common - Sporulation domain protein Ping_1967 26 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 119945973 Common ohR transcriptional regulator of MarR family OhrR Ping_2313 108 COG1846 MarR, Transcriptional regulators Transcription 119946810 Common - fused N-acetyl glucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyl transferase Ping_3204 230 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 119946025 Common - hypothetical protein DUF58 Ping_2369 38 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 119947163 Common - StbA family protein Ping_3561 15 None None None 119946746 Common - methionine sulfoxide reductase A Ping_3135 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 119945804 Nonpathogen - hypothetical protein Ping_2141 3 None None None 119947147 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Ping_3545 13 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119945178 Common - 3,4-dihydroxy-2-butanone 4-phosphate synthase Ping_1442 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 119945116 Nonpathogen - putative membrane protein, suppressor for copper-sensitivity A Ping_1377 1 None None None 119944050 Common - signaling protein with a cAMP-binding site and CBS domains Ping_0264 192 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 119947183 Common - predicted sigma-28 (sigma F) factor Ping_3581 98 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 119945021 Common - fused aspartokinase and homoserine dehydrogenase Ping_1275 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 119946490 Common - hypothetical protein Ping_2866 12 None None None 119946722 Common - Transposon Tn7 transposition protein D Ping_3106 5 None None None 119944588 Common - UDP-N-acetylmuramate Ping_0826 209 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 119946103 Common rbgA ribosomal biogenesis GTPase Ping_2453 95 COG1161 COG1161, Predicted GTPases General function prediction only 119943866 Common - phosphoribosylaminoimidazole carboxylase, catalytic subunit Ping_0073 231 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 119943825 Common - hypothetical protein Ping_0031 5 None None None 119945505 Common - oxidoreductase domain protein Ping_1809 164 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 119945315 Common - phage transcriptional regulator, AlpA Ping_1598 35 COG3311 AlpA, Predicted transcriptional regulator Transcription 119944834 Common - hypothetical protein DUF709 Ping_1076 34 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 119945166 Common - Ig domain protein, group 2 domain protein Ping_1430 6 None None None 119945626 Common - hypothetical protein Ping_1936 16 None None None 119947162 Nonpathogen - hypothetical protein Ping_3560 1 None None None 119944411 Common - signal peptidase I Ping_0639 212 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 119945400 Common - glycolate oxidase-like protein Ping_1690 164 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 119945829 Common - molybdenum cofactor biosynthesis protein C Ping_2169 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 119946524 Common - L-2-haloalkanoic acid dehalogenase, HAD superfamily protein Ping_2901 80 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 119945788 Common - hypothetical protein Ping_2124 5 None None None 119945879 Common - threonyl-tRNA synthetase Ping_2219 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119947256 Common - acyl transferase region Ping_3654 205 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 119944947 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Ping_1194 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 119945345 Nonpathogen - hypothetical protein Ping_1630 2 None None None 119946683 Common - hypothetical protein Ping_3064 7 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 119944559 Common - sulfate adenylyltransferase subunit 2 Ping_0796 138 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 119945019 Common - HAD-superfamily subfamily IB hydrolase, TIGR01490 Ping_1271 7 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 119944212 Common - Heparinase II/III family protein Ping_0433 32 COG5360 COG5360, Uncharacterized protein conserved in bacteria Function unknown 119945534 Nonpathogen - hypothetical protein Ping_1838 1 None None None 119947085 Common bipA GTP-binding virulence regulator protein BipA Ping_3483 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 119946942 Common - ribosome-associated GTPase Ping_3336 163 COG1162 COG1162, Predicted GTPases General function prediction only 119943936 Common - restriction modification system DNA specificity domain Ping_0149 82 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 119945193 Nonpathogen - hypothetical protein Ping_1457 1 None None None 119944415 Common - pyridoxal phosphate biosynthetic protein PdxJ Ping_0643 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 119944112 Common - glycosyl transferase, family 9 Ping_0327 45 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 119947135 Common - GCN5-related N-acetyltransferase Ping_3533 30 COG0456 RimI, Acetyltransferases General function prediction only 119946039 Common - dextran glucosidase Ping_2383 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119946795 Common - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Ping_3188 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 119946817 Common - phosphoglyceromutase Ping_3211 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 119946552 Common - hypothetical protein Ping_2931 70 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 119943904 Common - GCN5-related N-acetyltransferase Ping_0111 21 COG0456 RimI, Acetyltransferases General function prediction only 119944698 Common - Cbb3-type cytochrome oxidase component Ping_0937 3 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 119944102 Common - TatD-related deoxyribonuclease Ping_0317 235 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 119946731 Common - FAD-dependent oxidoreductase of HI0933-like family protein Ping_3115 133 COG2081 COG2081, Predicted flavoproteins General function prediction only 119945128 Common - multiple antibiotic resistance (MarC)-related proteins Ping_1391 159 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 119946237 Common - Integrase, catalytic region Ping_2599 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 119945239 Common - FeS assembly ATPase SufC Ping_1507 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 119946983 Common - carbon storage regulator, CsrA Ping_3378 80 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 119944810 Common - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Ping_1052 38 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 119943952 Common - Sporulation domain protein Ping_0165 4 COG3266 DamX, Uncharacterized protein conserved in bacteria Function unknown 119945144 Common - hypothetical protein Ping_1408 6 None None None 119945656 Common - tRNA pseudouridine synthase A Ping_1969 236 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 119945079 Common - phosphoheptose isomerase Ping_1335 124 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 119946189 Common - fused CheR-type MCP methyltransferase and PAS sensor protein Ping_2549 156 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 119946448 Common - ABC polar amino acid transporter inner membrane protein Ping_2823 172 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119946642 Common - Heme exporter protein D (CcmD) Ping_3021 27 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 119946254 Common - ABC transporter ATP-binding protein Ping_2616 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 119944838 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin type Ping_1080 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 119944987 Common - Spermidine/putrescine-binding periplasmic protein-like protein Ping_1238 120 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 119946415 Common - ABC ribose transporter permease component Ping_2789 111 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 119947334 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Ping_3741 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 119945093 Common - peptidase M56, BlaR1 Ping_1350 11 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 119946652 Common - Pyridoxal-5'-phosphate-dependent enzyme, beta subunit Ping_3031 76 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 119946710 Common - regulatory protein for cyclic-di-GMP, EAL domain Ping_3093 164 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119945912 Common - 2-oxoglutarate dehydrogenase, E1 subunit Ping_2252 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 119945366 Common - imidazole glycerol-phosphate dehydratase/histidinol phosphatase Ping_1654 217 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 119943891 Common - general secretory pathway protein E Ping_0098 212 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 119946347 Common - hypothetical protein Ping_2718 9 None None None 119946541 Common - hypothetical protein Ping_2920 9 None None None 119946686 Nonpathogen - putative glucoamylase I (alpha-1,4-glucan glucosidase), extracellular starch-degrading enzyme Ping_3067 1 None None None 119944177 Common - permease YjgP/YjgQ family protein Ping_0397 95 COG0795 COG0795, Predicted permeases General function prediction only 119945635 Nonpathogen - hypothetical protein Ping_1947 3 None None None 119946200 Nonpathogen - hypothetical protein Ping_2560 2 None None None 119945072 Common - Fe-S protein assembly chaperone HscA Ping_1328 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 119946017 Common - Pyruvate kinase Ping_2361 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 119945501 Common - dienelactone hydrolase Ping_1805 104 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 119945897 Common - hypothetical protein RIO1 Ping_2237 66 COG1718 RIO1, Serine/threonine protein kinase involved in cell cycle control Signal transduction mechanisms / Cell division and chromosome partitioning 119946716 Common - hypothetical protein Ping_3100 18 COG3899 COG3899, Predicted ATPase General function prediction only 119947204 Common - pyruvate dehydrogenase complex, E1 beta2 component Ping_3602 209 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 119944683 Nonpathogen - hypothetical protein Ping_0922 2 None None None 119946553 Common - carbohydrate kinase, thermoresistant glucokinase family protein Ping_2932 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 119946504 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase Ping_2881 219 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 119944982 Common - chaperone DnaK-related protein Ping_1233 151 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 119944184 Common - P-loop ATPase and inactivated derivatives-like protein Ping_0404 32 COG5545 COG5545, Predicted P-loop ATPase and inactivated derivatives General function prediction only 119945886 Common - Uncharacterized conserved small protein-like protein Ping_2226 12 COG5515 COG5515, Uncharacterized conserved small protein Function unknown 119944844 Common - fatty acid/phospholipid synthesis protein PlsX Ping_1086 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 119945334 Nonpathogen - hypothetical protein Ping_1618 1 None None None 119947142 Common - hypothetical protein DUF479 Ping_3540 33 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 119945508 Common - nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein Ping_1812 11 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 119946764 Common - ABC transporter for oligopeptide ATP-binding protein Ping_3157 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 119945824 Common - molybdate ABC transporter, ATPase subunit Ping_2164 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 119944799 Common - hypothetical protein Ping_1041 116 COG2353 COG2353, Uncharacterized conserved protein Function unknown 119946458 Common - ABC amino acid transporter extracellular solute-binding protein, family 3 Ping_2833 176 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119947235 Common - hypothetical protein DUF395, YeeE/YedE Ping_3633 66 COG2391 COG2391, Predicted transporter component General function prediction only 119945563 Common - 2-methylcitrate synthase/citrate synthase II Ping_1868 194 COG0372 GltA, Citrate synthase Energy production and conversion 119946377 Nonpathogen - hypothetical protein Ping_2751 2 None None None 119945871 Common secF preprotein translocase subunit SecF Ping_2211 204 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 119945966 Common - hypothetical protein Ping_2306 8 None None None 119944348 Common - putative methyltransferase Ping_0575 25 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 119946372 Common - ABC transporter periplasmic substrate-binding protein Ping_2746 90 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 119944574 Common - dihydropteroate synthase Ping_0812 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 119945374 Common ftsK DNA segregation ATPase FtsK Ping_1662 200 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 119944302 Common - RNA methyltransferase, TrmA family protein Ping_0529 186 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 119946386 Common - acetate kinase Ping_2760 162 COG0282 ackA, Acetate kinase Energy production and conversion 119945571 Nonpathogen - hypothetical protein Ping_1876 16 None None None 119946858 Common - Type IV pili fiber-building block protein Ping_3252 3 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 119944409 Common - RNP-1 like RNA-binding protein Ping_0637 66 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 119944455 Common - cystathionine beta-lyase Ping_0683 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 119943883 Common mtlR mannitol repressor protein Ping_0090 18 COG3722 MtlR, Transcriptional regulator Transcription 119944609 Common - hypothetical protein Ping_0848 7 None None None 119946367 Common - sodium/hydrogen exchanger Ping_2741 100 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 119946693 Nonpathogen - hypothetical protein Ping_3075 2 None None None 119944847 Common - 3-oxoacyl-(acyl-carrier-protein) reductase Ping_1089 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 119945232 Common - Tetratricopeptide TPR_2 repeat protein Ping_1499 130 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 119945265 Nonpathogen - hypothetical protein Ping_1537 2 None None None 119946150 Common - ABC sugar transporter inner membrane binding protein Ping_2510 169 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 119945590 Common - EcoEI R, C-terminal domain protein Ping_1895 135 COG4096 HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 119945225 Common - phosphoesterase, PA-phosphatase related Ping_1491 113 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 119944134 Common - dihydroxynaphthoic acid synthetase Ping_0350 178 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 119944525 Common - hypothetical protein DUF188 Ping_0754 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 119945052 Common - predicted antifreeze protein type I Ping_1307 40 COG4260 COG4260, Putative virion core protein (lumpy skin disease virus) Function unknown 119945326 Common - hypothetical protein Ping_1610 57 COG2912 COG2912, Uncharacterized conserved protein Function unknown 119945624 Common - hypothetical protein Ping_1934 17 None None None 119946593 Common - undecaprenyl diphosphate synthase Ping_2972 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 119945081 Common - heat shock protein Ping_1337 35 COG4335 COG4335, DNA alkylation repair enzyme DNA replication, recombination, and repair 119943798 Common - ATP-dependent protease peptidase subunit Ping_0004 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 119944626 Common - glutamate-1-semialdehyde-2,1-aminomutase Ping_0865 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 119944893 Common - iojap-like protein Ping_1137 200 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 119947328 Common - ATP synthase F0, C subunit Ping_3735 108 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 119944287 Common - luciferase family protein Ping_0513 115 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 119946357 Common - glycine cleavage system protein H Ping_2728 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 119944955 Common - sensor histidine kinase, PAS domain Ping_1204 185 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119943819 Common - pentapeptide repeat protein Ping_0025 94 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 119945271 Common - peptidase M23B Ping_1544 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 119945300 Nonpathogen - hypothetical protein Ping_1582 1 None None None 119944544 Common - polysaccharide biosynthesis protein Ping_0778 38 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 119946280 Common - phospholipid/glycerol acyltransferase Ping_2645 58 COG3176 COG3176, Putative hemolysin General function prediction only 119947221 Common - predicted kinase Ping_3619 50 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 119944990 Nonpathogen - hypothetical protein Ping_1241 1 None None None 119944888 Common - peptidase U62, modulator of DNA gyrase Ping_1132 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 119944122 Common - thiosulfate:cyanide sulfurtransferase (rhodanese) Ping_0337 75 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 119944259 Common - multi-sensor histidine kinase with CHASE and PAS/PAC sensory domains Ping_0484 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119944163 Nonpathogen - hypothetical protein Ping_0383 5 None None None 119945331 Common - cell wall degradation protein Ping_1615 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 119945990 Common - ABC-type multidrug/protein/lipid transport system ATP-binding protein Ping_2331 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 119946514 Common - ABC transporter ATP-binding protein Ping_2891 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 119944778 Common - Endonuclease/exonuclease/phosphatase Ping_1020 13 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 119945718 Common - transposase, IS4 family protein Ping_2042 30 COG5433 COG5433, Transposase DNA replication, recombination, and repair 119944606 Common - chaperonin Cpn60, GroEL, large subunit of GroESL Ping_0844 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 119944291 Nonpathogen - conserved hypothetical alkylhydroperoxidase AhpD domain protein Ping_0517 3 None None None 119945182 Common - hypothetical transmembrane protein DUF6 Ping_1446 88 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 119946990 Common - transcriptional regulator, substrate-binding, LysR family protein Ping_3385 187 COG0583 LysR, Transcriptional regulator Transcription 119944201 Nonpathogen - 2-deoxy-D-gluconate-3-dehydrogenase Ping_0422 1 None None None 119944866 Common nrdB ribonucleotide-diphosphate reductase subunit beta Ping_1109 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 119944870 Common - bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase Ping_1113 155 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 119944658 Common carB carbamoyl phosphate synthase large subunit Ping_0897 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 119946771 Nonpathogen - ABC transporter heme permease Ping_3164 1 None None None 119946540 Common - leucine export protein LeuE Ping_2918 109 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 119945771 Common - short-chain dehydrogenase/reductase SDR Ping_2106 223 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 119945540 Common - patatin-like protein of phospholipase family protein Ping_1844 125 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 119943841 Common - ABC transporter for nitrate/sulfonate/bicarbonate ATP-binding protein Ping_0048 249 COG4525 TauB, ABC-type taurine transport system, ATPase component Inorganic ion transport and metabolism 119945663 Common - aromatic amino acid aminotransferase Ping_1976 72 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 119944971 Common - ABC transporter for copper permease protein Ping_1221 23 None None None 119944907 Common ftsA cell division ATP-binding protein FtsA Ping_1151 176 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 119945529 Common - isoquinoline 1-oxidoreductase maturation factor Ping_1833 21 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 119945754 Common - excinuclease ABC, A subunit Ping_2085 233 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 119946844 Common - RNA chaperone Hfq Ping_3238 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 119946570 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein Ping_2949 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 119947214 Common - tRNA modification GTPase TrmE Ping_3612 229 COG0486 ThdF, Predicted GTPase General function prediction only 119946393 Common - mercuric reductase, membrane-associated Ping_2767 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 119943807 Common - secreted protein Hcp, potential oxidative stress protein Ping_0013 29 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 119946635 Common - cytidylate kinase Ping_3014 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 119945741 Common - betaine aldehyde dehydrogenase Ping_2071 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119944147 Common - hypothetical protein Ping_0366 25 COG2501 COG2501, Uncharacterized conserved protein Function unknown 119945091 Common - hypothetical protein Ping_1348 34 None None None 119944785 Common purU formyltetrahydrofolate deformylase Ping_1027 216 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 119946477 Common - ubiquinone biosynthesis protein Ping_2852 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 119945856 Common - ABC transporter ATP-binding protein predicted for antimicrobial peptide Ping_2196 249 COG4167 SapF, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 119946439 Common - hypothetical protein Ping_2814 5 None None None 119946902 Common - ribonuclease activity regulator protein RraA Ping_3296 76 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 119946432 Common - transcriptional regulator, periplasmic binding protein of LacI family protein Ping_2806 107 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119945935 Nonpathogen - hypothetical protein Ping_2275 2 None None None 119946851 Common - hypothetical protein Ping_3245 5 None None None 119947201 Common - predicted ATPases involved in pili biogenesis, PilT Ping_3599 4 None None None 119945707 Common - amidohydrolase Ping_2027 171 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 119944532 Common - GDP-mannose mannosyl hydrolase Ping_0765 19 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 119946157 Nonpathogen - hypothetical protein Ping_2517 1 None None None 119945041 Common - type III restriction enzyme, res subunit Ping_1295 138 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 119944129 Common - ribokinase Ping_0344 208 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 119945842 Common - acylphosphatase Ping_2182 89 COG1254 AcyP, Acylphosphatases Energy production and conversion 119946677 Nonpathogen - hypothetical protein Ping_3058 1 None None None 119946800 Common - transposase and inactivated derivative Ping_3194 27 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 119945261 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_1532 239 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119944498 Common - TolB, N-terminal domain protein Ping_0727 155 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 119946048 Common - Polypeptide-transport-associated domain protein, ShlB-type Ping_2395 52 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 119946041 Nonpathogen - hypothetical protein Ping_2385 1 None None None 119946628 Common - ABC iron(III) transporter periplasmic binding protein Ping_3007 106 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 119943803 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Ping_0009 69 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 119946270 Common - thioredoxin 2 Ping_2633 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 119945922 Common - 2-dehydropantoate 2-reductase Ping_2262 87 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 119946129 Common - hypothetical protein Ping_2481 20 COG3646 COG3646, Uncharacterized phage-encoded protein Function unknown 119943796 Common - transposase and inactivated derivative Ping_0002 27 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944364 Common - 6-phosphofructokinase Ping_0591 154 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 119946884 Common - fumarate reductase flavoprotein subunit Ping_3278 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 119944759 Common - amine oxidase Ping_1001 67 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 119945148 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein Ping_1412 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 119944475 Common - serine/threonine protein kinase Ping_0704 149 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 119943812 Common - hypothetical protein Ping_0018 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 119946538 Common - diguanylate cyclase Ping_2916 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119945155 Common - hypothetical protein DUF162 Ping_1419 85 COG1556 COG1556, Uncharacterized conserved protein Function unknown 119946053 Nonpathogen - hypothetical protein Ping_2402 4 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 119945673 Common - hypothetical protein Ping_1986 20 COG3150 COG3150, Predicted esterase General function prediction only 119947054 Common - NusG antitermination factor Ping_3451 215 COG0250 NusG, Transcription antiterminator Transcription 119943874 Common trkA potassium transporter peripheral membrane component Ping_0081 152 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 119946610 Common - ABC transporter ATP-binding protein Ping_2989 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 119944321 Common - ABC oligopeptide/dipeptide transporter ATP-binding protein Ping_0548 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 119945649 Nonpathogen - hypothetical protein Ping_1961 1 None None None 119945387 Nonpathogen - hypothetical protein Ping_1676 1 None None None 119943966 Common - SH3, type 3 domain protein Ping_0179 37 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 119946128 Common - hypothetical protein Ping_2480 34 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 119946517 Common - hypothetical protein Ping_2894 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 119946578 Common - hypothetical protein DUF214 Ping_2957 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 119946603 Common - transcriptional regulator of GntR domain Ping_2982 91 COG2186 FadR, Transcriptional regulators Transcription 119947061 Common - Methyltransferase type 11 Ping_3459 17 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 119944158 Common - stress protein, tellurium resistance TerD Ping_0378 31 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119945415 Nonpathogen - hypothetical protein Ping_1710 2 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 119946568 Nonpathogen - hypothetical protein Ping_2947 1 None None None 119944718 Common - NLP/P60 protein Ping_0958 137 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 119945010 Common - gas vesicle protein GVPa Ping_1262 22 None None None 119947101 Common - DNA-directed RNA polymerase subunit alpha Ping_3499 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 119946289 Nonpathogen - hypothetical protein Ping_2656 1 None None None 119944564 Common - acetyltransferase Ping_0801 12 None None None 119945017 Common - sucrose-6F-phosphate phosphohydrolase Ping_1269 14 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 119947065 Common - dTDP-4-dehydrorhamnose reductase Ping_3463 177 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 119947282 Common - phosphonate metabolism protein PhnM Ping_3686 59 COG3454 COG3454, Metal-dependent hydrolase involved in phosphonate metabolism Inorganic ion transport and metabolism 119946637 Common - cytochrome c-type biogenesis protein CcmI Ping_3016 42 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 119944530 Common - polysaccharide export protein Ping_0763 90 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 119944483 Common - C4-dicarboxylate transport Sigma-54 regulatory protein Ping_0712 217 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119945732 Common - hypothetical protein DUF45 Ping_2061 41 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 119945752 Common - amino acid transport integral membrane protein Ping_2083 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 119945596 Common - Inosine/uridine-preferring nucleoside hydrolase Ping_1902 111 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 119945844 Common - cysteinyl-tRNA synthetase Ping_2184 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119947075 Common - ATP-dependent DNA helicase Rep Ping_3473 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 119947042 Common - 30S ribosomal protein S7 Ping_3439 238 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 119946211 Nonpathogen - hypothetical protein Ping_2571 1 None None None 119945640 Common - cation diffusion facilitator family transporter Ping_1952 213 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 119944935 Common - Resolvase, N-terminal domain Ping_1181 15 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 119946898 Common - hypothetical protein Ping_3292 4 None None None 119945177 Common - riboflavin synthase subunit alpha Ping_1441 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 119945905 Nonpathogen - hypothetical protein Ping_2245 6 None None None 119946134 Common - DNA methylase N-4/N-6 domain protein Ping_2487 90 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 124021675 Common - DNA polymerase, beta domain protein region Ping_0758 6 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 119947297 Common - Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like repeat Ping_3702 122 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 119943843 Common - hypothetical protein DUF81 Ping_0050 32 COG0730 COG0730, Predicted permeases General function prediction only 119946079 Common - DNA-binding helix-turn-helix domain-containing transcriptional regulator protein Ping_2428 45 COG1737 RpiR, Transcriptional regulators Transcription 119945434 Common - galactoside O-acetyltransferase Ping_1731 206 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 119945838 Common dinG ATP-dependent DNA helicase DinG Ping_2178 128 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 119945784 Common - aconitate hydratase 1 Ping_2120 223 COG1048 AcnA, Aconitase A Energy production and conversion 119945044 Common - ABC transporter ATP-binding protein Ping_1298 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 119945253 Common - transporter major facilitator superfamily MFS_1 Ping_1523 65 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944369 Common - penicillin-binding protein 1B Ping_0596 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 119945888 Common - YaeQ family protein Ping_2228 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 119944077 Common - ABC transporter foroligopeptide/dipeptide ATP-binding protein Ping_0292 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 119945955 Common - PhnA protein-like protein Ping_2295 101 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 119946441 Common - protein containing tetratricopeptide (TPR) repeat Ping_2816 61 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 119944500 Common - Tetratricopeptide TPR_2 repeat protein Ping_0729 89 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 119945609 Common - ABC transporter for amino acids ATP-binding protein Ping_1918 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 119945064 Common - hypothetical protein Ping_1320 8 None None None 119946241 Common - acyl-CoA dehydrogenase domain protein Ping_2603 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 119947031 Common - lysyl-tRNA synthetase Ping_3428 248 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 119944467 Common - nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein Ping_0696 130 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119944556 Common - transposase, IS4 family protein Ping_0793 32 COG5433 COG5433, Transposase DNA replication, recombination, and repair 119944334 Common - ABC transporter for peptide ATP-binding protein Ping_0561 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 119946970 Common - tRNA (guanine-N1)-methyltransferase Ping_3365 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 119944221 Common - acyltransferase 3 Ping_0443 115 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 119945380 Common - ribonuclease D Ping_1668 107 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 119944384 Common - transcriptional regulator of MarR family protein Ping_0611 105 COG1846 MarR, Transcriptional regulators Transcription 119945455 Nonpathogen - hypothetical protein Ping_1752 1 None None None 119947096 Common - GTP-binding protein, HSR1-related Ping_3494 17 COG1160 COG1160, Predicted GTPases General function prediction only 119944015 Common - acetylglutamate kinase Ping_0229 212 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 119944871 Common - DNA gyrase, A subunit Ping_1114 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 119946956 Common - ThiJ/PfpI domain protein Ping_3350 104 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 119943899 Common - General secretion pathway M protein Ping_0106 8 COG3149 PulM, Type II secretory pathway, component PulM Intracellular trafficking and secretion 119944017 Common - argininosuccinate synthase Ping_0231 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 119947167 Common fliF flagellar MS-ring protein Ping_3565 125 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 119944736 Common - hypothetical protein Ping_0977 4 None None None 119946262 Nonpathogen - hypothetical protein Ping_2624 12 None None None 119944394 Common - putative methyltransferase Ping_0622 209 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 119947005 Nonpathogen - predicted glucosamine-6-phosphate isomerase Ping_3402 1 None None None 119946161 Common - hypothetical protein Ping_2521 4 None None None 119944310 Common - malic enzyme aka malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) Ping_0537 200 COG0281 SfcA, Malic enzyme Energy production and conversion 119945575 Common - diguanylate cyclase Ping_1880 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119946661 Common - alanine racemase domain protein Ping_3040 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 119946838 Common - FAD dependent oxidoreductase Ping_3232 129 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 119945119 Nonpathogen - hypothetical protein Ping_1380 3 None None None 119945614 Common - 8-amino-7-oxononanoate synthase Ping_1923 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 119944422 Common - phenylacetate-CoA oxygenase, PaaG subunit Ping_0650 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 119944940 Nonpathogen - hypothetical protein Ping_1187 2 None None None 119945865 Common - hypothetical protein Ping_2205 11 None None None 119946696 Common - hypothetical protein Ping_3078 2 None None None 119946317 Nonpathogen - ribosome recycling factor Ping_2687 1 None None None 119944452 Nonpathogen - putative type IV pilus assembly protein PilW Ping_0680 1 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 119945274 Common - Deoxyribodipyrimidine photo-lyase Ping_1549 131 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 119945725 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Ping_2051 188 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946244 Common - AMP-dependent synthetase and ligase Ping_2606 218 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 119947083 Common - D-tyrosyl-tRNA(Tyr) deacylase Ping_3481 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 119944640 Common - phosphoglucomutase Ping_0879 222 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 119944151 Common pgk phosphoglycerate kinase Ping_0371 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 119944808 Common - Organic solvent tolerance protein Ping_1050 123 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 119946605 Common - two component transcriptional regulator, LuxR family protein Ping_2984 223 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119946807 Common - amidophosphoribosyltransferase Ping_3201 156 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 119945169 Common - permease with 5 transmembrane domains Ping_1433 122 COG0730 COG0730, Predicted permeases General function prediction only 119946744 Common - ferredoxin Ping_3131 102 COG0633 Fdx, Ferredoxin Energy production and conversion 119945376 Common - recombination factor protein RarA Ping_1664 227 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 119944000 Common - Na+/H+ antiporter NhaA Ping_0214 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 119946408 Common - pyruvate dehydrogenase complex, E1 beta subunit Ping_2782 178 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 119947315 Common - response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Ping_3722 216 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119944804 Common apaH diadenosine tetraphosphatase Ping_1046 103 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 119947233 Common - transcriptional regulator of ArsR family protein Ping_3631 150 COG0640 ArsR, Predicted transcriptional regulators Transcription 119946755 Common - TRAP dicarboxylate transporter, DctM subunit Ping_3148 125 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 119946979 Common - hypothetical protein Ping_3374 77 COG1238 COG1238, Predicted membrane protein Function unknown 119945946 Common gltR response regulator GltR Ping_2286 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119945284 Nonpathogen - hypothetical protein Ping_1561 1 None None None 119946117 Nonpathogen - hypothetical protein Ping_2467 1 None None None 119944977 Common - two component transcriptional regulator, winged helix family protein Ping_1228 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119944916 Common - hypothetical protein Ping_1160 44 COG4582 COG4582, Uncharacterized protein conserved in bacteria Function unknown 119945939 Common - dihydrouridine synthase, DuS Ping_2279 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 119945605 Common - hypothetical protein DUF490 Ping_1914 88 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 119946735 Nonpathogen - hypothetical protein Ping_3119 1 None None None 119946326 Common - histone deacetylase superfamily protein Ping_2697 160 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 119944814 Common - tryptophan synthase subunit beta Ping_1056 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 119945475 Common - rare lipoprotein A Ping_1773 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 119946147 Common - transcriptional regulator, periplasmic binding protein of LacI family protein Ping_2507 126 COG1609 PurR, Transcriptional regulators Transcription 119943996 Common - cytochrome c, class I Ping_0210 64 COG2863 COG2863, Cytochrome c553 Energy production and conversion 119946312 Nonpathogen - hypothetical protein Ping_2681 1 None None None 119945539 Common - arsenical-resistance protein Ping_1843 127 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 119943948 Common pilP type IV pilus biogenesis protein PilP Ping_0161 37 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 119946001 Common - anion transporter Ping_2343 99 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 119945556 Common - dihydrodipicolinate synthase Ping_1860 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 119946110 Common - peptidase dimerisation domain protein Ping_2460 103 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 119947277 Common - ISSod10, transposase OrfB Ping_3681 36 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946557 Common - carbohydrate kinase, thermoresistant glucokinase family protein Ping_2936 81 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 119945368 Common - Histidinol dehydrogenase Ping_1656 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 119943917 Common - hypothetical protein Ping_0127 17 None None None 119946381 Common - siroheme synthase Ping_2755 139 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 119944317 Common - transcriptional regulator, substrate-binding, LysR family protein Ping_0544 87 COG0583 LysR, Transcriptional regulator Transcription 119945411 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Ping_1705 34 COG3565 COG3565, Predicted dioxygenase of extradiol dioxygenase family General function prediction only 119944963 Common hypB GTP hydrolase, accessory liganding Ni into hydrogenases, HypB Ping_1212 132 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 119947016 Nonpathogen - hypothetical protein Ping_3413 1 None None None 119944596 Common - hypothetical protein DUF446 Ping_0834 31 COG3098 COG3098, Uncharacterized protein conserved in bacteria Function unknown 119945361 Nonpathogen - hypothetical protein Ping_1649 5 None None None 119944440 Common - CTP synthetase Ping_0668 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 119946224 Common - phage integrase family protein Ping_2585 4 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119944231 Common - glycosyl transferase, group 1 Ping_0454 231 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 119944438 Common - porin, Gram-negative type Ping_0666 21 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 119944511 Common - anaerobic ribonucleoside triphosphate reductase Ping_0740 93 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 119944378 Common - yecA family protein Ping_0605 40 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 119945103 Common - putative transposase Ping_1361 32 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946712 Common - cold-shock DNA-binding domain protein Ping_3095 180 COG1278 CspC, Cold shock proteins Transcription 119943808 Common - hypothetical protein Ping_0014 4 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 119944819 Common - PHP C-terminal domain protein Ping_1061 128 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 119943926 Common - mannonate dehydratase Ping_0136 58 COG1312 UxuA, D-mannonate dehydratase Carbohydrate transport and metabolism 119945850 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein Ping_2190 103 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 119947010 Common - Rhodanese domain protein Ping_3407 109 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 119944083 Common - fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase and uroporphyrinogen methyltransferase Ping_0298 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 119947287 Common phnH carbon-phosphorus lyase complex subunit Ping_3691 32 COG3625 PhnH, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 119945836 Common - ferredoxin-type protein NapF Ping_2176 64 COG1152 CdhA, CO dehydrogenase/acetyl-CoA synthase alpha subunit Energy production and conversion 119945407 Nonpathogen - accessory gene regulator Ping_1700 2 None None None 119946064 Common - Ppx/GppA phosphatase Ping_2413 181 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 119944793 Common - Alcohol dehydrogenase GroES domain protein Ping_1035 104 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 119947034 Common - acetolactate synthase, small subunit Ping_3431 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 119945845 Common - Peptidylprolyl isomerase Ping_2185 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 119944826 Common - phosphoribosylglycinamide formyltransferase Ping_1068 225 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 119947261 Common - malonate decarboxylase alpha subunit Ping_3659 27 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 119944228 Nonpathogen - small multidrug resistance protein Ping_0451 4 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 119944635 Common - flavodoxin Ping_0874 74 COG0716 FldA, Flavodoxins Energy production and conversion 119945965 Common - putative nucleotide-binding protein containing TIR-like domain Ping_2305 18 COG4271 COG4271, Predicted nucleotide-binding protein containing TIR -like domain Transcription 119945442 Nonpathogen - hypothetical protein Ping_1739 1 None None None 119946480 Common - antioxidant, AhpC/Tsa family protein Ping_2855 81 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 119944301 Common - hybrid sensory histidine kinase BarA Ping_0528 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945613 Common - biotin biosynthesis protein BioC Ping_1922 114 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 119944762 Common - hypothetical protein Ping_1004 11 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 119944927 Common engA GTP-binding protein EngA Ping_1172 231 COG1160 COG1160, Predicted GTPases General function prediction only 119946140 Nonpathogen - hypothetical protein Ping_2495 3 None None None 119946308 Common - GCN5-related N-acetyltransferase Ping_2677 81 None None None 119944780 Common - nitrite transporter Ping_1022 156 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 119946171 Common - hypothetical protein Ping_2531 6 None None None 119946194 Common - hypothetical protein Ping_2554 6 None None None 119946178 Common - domain of unknown function DUF1745 Ping_2538 36 COG3287 COG3287, Uncharacterized conserved protein Function unknown 119943858 Common rpoE RNA polymerase sigma factor RpoE Ping_0065 167 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 119944061 Common - Ethanolamine ammonia lyase large subunit Ping_0276 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 119944643 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_0882 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119946522 Common - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Ping_2899 213 COG1049 AcnB, Aconitase B Energy production and conversion 119946230 Common - ABC phosphate transporter ATP-binding protein Ping_2591 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 119944217 Nonpathogen - hypothetical protein Ping_0439 2 None None None 119943911 Common - soluble pyridine nucleotide transhydrogenase Ping_0118 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 119945691 Common - ABC transporter extracellular solute-binding protein, family 1 Ping_2008 79 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119944720 Common - Cupin 4 family protein Ping_0960 61 COG2850 COG2850, Uncharacterized conserved protein Function unknown 119946782 Common - putative GAF sensor protein Ping_3175 180 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 119943864 Common - shikimate 5-dehydrogenase Ping_0071 191 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 119943934 Common - hypothetical protein Ping_0146 6 None None None 119945779 Nonpathogen - hypothetical protein Ping_2114 2 None None None 119944208 Common - integral membrane sensor signal transduction histidine kinase Ping_0429 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119944376 Common - hypothetical protein Ping_0603 3 COG4711 COG4711, Predicted membrane protein Function unknown 119945679 Common - beta-ketoacyl synthase Ping_1995 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119945689 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Ping_2006 196 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119945466 Common - Na+/H+ antiporter Ping_1764 7 None None None 119943859 Common - anti sigma-E protein, RseA Ping_0066 18 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 119945393 Common - conserved hypothetical protein 698 Ping_1682 115 COG2855 COG2855, Predicted membrane protein Function unknown 119944729 Common - hypothetical protein Ping_0970 9 None None None 119946516 Common - putative PTS IIA-like nitrogen-regulatory protein PtsN Ping_2893 132 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 119944071 Common - phospho-2-dehydro-3-heoxyheptonate aldolase Ping_0286 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 119946474 Common - RTX toxin-like protein Ping_2849 136 None None None 119947222 Common - thiol:disulfide interchange protein DsbA Ping_3620 69 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 119947289 Common - ABC phosphonate transporter inner membrane protein Ping_3693 139 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 119943851 Common - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Ping_0058 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 119947047 Common - putative endoribonuclease L-PSP Ping_3444 191 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 119944737 Common - response regulator receiver modulated diguanylate cyclase Ping_0978 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 119944335 Common - ABC peptide transporter extracellular solute-binding protein, family 5 Ping_0562 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 119944222 Nonpathogen - Membrane protein involved in colicin uptake-like protein Ping_0445 2 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 119944144 Common - thiamine biosynthesis protein ThiS Ping_0363 15 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 119944371 Common - hypothetical protein Ping_0598 5 None None None 119947286 Common - phosphonate metabolism Ping_3690 45 COG3626 PhnI, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 119945664 Common - fumarate hydratase Ping_1977 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 119945114 Common - two component transcriptional regulator, winged helix family protein Ping_1375 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119945426 Common - hypothetical protein Ping_1721 14 None None None 119944745 Common - YbaK/prolyl-tRNA synthetase associated region Ping_0986 30 COG2606 EbsC, Uncharacterized conserved protein Function unknown 119944210 Common - UDP-N-acetylglucosamine 2-epimerase Ping_0431 156 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 119944905 Common - D-alanine--D-alanine ligase Ping_1149 213 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 119946402 Common xni exonuclease IX Ping_2776 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 119944920 Common - hypothetical protein Ping_1165 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 119946229 Common pstA ABC phosphate transporter inner membrane protein PstA Ping_2590 234 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 119944315 Common - hydrolase with alpha/beta-hydrolase fold Ping_0542 37 COG3571 COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 119946374 Common - 4-aminobutyrate aminotransferase Ping_2748 235 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 119946665 Common - hypothetical protein Ping_3044 13 None None None 119947283 Common - ABC phosphonate transporter ATP-binding protein Ping_3687 249 COG4778 PhnL, ABC-type phosphonate transport system, ATPase component Inorganic ion transport and metabolism 119945131 Nonpathogen - hypothetical protein Ping_1394 1 None None None 119946319 Nonpathogen - hypothetical protein Ping_2689 1 None None None 119945860 Common - integral inner membrane protein UPF0005 Ping_2200 67 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 119946309 Common - hypothetical protein Ping_2678 34 COG4325 COG4325, Predicted membrane protein Function unknown 119946302 Common - ATPase, P-type (transporting), HAD superfamily, subfamily IC Ping_2670 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 119946671 Common - Xylose isomerase domain protein TIM barrel Ping_3052 84 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 119945684 Common - 3-beta hydroxysteroid dehydrogenase/isomerase Ping_2000 204 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119944666 Common - ATP synthase F0, H+-transporting two-sector ATPase A subunit Ping_0905 6 None None None 119946945 Common - Ion transport 2 domain protein Ping_3339 34 None None None 119944931 Common - hypothetical protein UPF0102 Ping_1176 133 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 119944477 Common - transcriptional coactivator/pterin dehydratase Ping_0706 109 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 119943804 Common - tyrosine recombinase XerC Ping_0010 227 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 119947072 Common - competence protein ComEA helix-hairpin-helix repeat protein Ping_3470 94 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 119946589 Common - surface antigen (D15) Ping_2968 160 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 119945974 Common - OsmC family protein Ping_2314 91 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 119944162 Common - hypothetical protein Ping_0382 8 None None None 119945867 Common - pseudouridine synthase, RluA family protein Ping_2207 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 119944437 Common - MazG family protein Ping_0665 158 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 119945527 Common - (2Fe-2S)-binding domain protein Ping_1831 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 119946535 Common - ABC transporter binding protein inner membrane protein Ping_2912 145 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 119945830 Common - molybdenum cofactor biosynthesis protein B Ping_2170 178 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 119946063 Common - hypothetical protein Ping_2412 4 None None None 119944633 Common - N-acetylglutamate synthase Ping_0872 197 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 119946256 Common - transporter major facilitator superfamily MFS_1 Ping_2618 196 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119946239 Common - hypothetical protein Ping_2601 35 None None None 119944085 Common - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Ping_0300 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 119943916 Common - universal stress protein containing UspA domain Ping_0125 38 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119946019 Common - glycogen debranching enzyme GlgX Ping_2363 152 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 119945402 Common - hypothetical protein DUF162 Ping_1692 55 COG1556 COG1556, Uncharacterized conserved protein Function unknown 119947206 Common - phosphopantetheine-binding protein Ping_3604 16 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119944928 Common - hypothetical protein Ping_1173 9 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 119946304 Nonpathogen - hypothetical protein Ping_2672 10 None None None 119944994 Common - two component, sigma54 specific, transcriptional regulator, Fis family protein Ping_1245 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119945013 Common - stress protein, tellurium resistance protein TerZ Ping_1265 25 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119946451 Common - aspartyl protease Ping_2826 39 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 119944980 Common - hypothetical protein Ping_1231 18 None None None 119945291 Common - glutathione-dependent formaldehyde-activating, GFA Ping_1573 53 COG3791 COG3791, Uncharacterized conserved protein Function unknown 119943932 Nonpathogen - hypothetical protein Ping_0143 1 None None None 119943946 Common - Fimbrial assembly family protein Ping_0159 36 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 119947108 Common - ribosomal protein L30 Ping_3506 168 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 119945828 Common - molybdopterin converting factor, subunit 1 Ping_2168 29 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 119946232 Common - hypothetical protein Ping_2593 3 None None None 119943993 Common - coproporphyrinogen III oxidase Ping_0207 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 119946750 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_3143 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119947312 Common - sensor histidine kinase with ATPase domain Ping_3719 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945282 Nonpathogen - hypothetical protein Ping_1559 1 None None None 119944561 Common - sulfate adenylyltransferase, large subunit Ping_0798 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 119944454 Common - hypothetical protein Ping_0682 6 None None None 119945616 Common - adenosylmethionine-8-amino-7-oxononanoate aminotransferase Ping_1925 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 119944443 Common - Septum formation initiator Ping_0671 63 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 119946116 Nonpathogen - hypothetical protein Ping_2466 1 None None None 119944768 Common - hypothetical protein Ping_1010 32 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 119947273 Common - TRAP dicarboxylate transporter, DctM subunit Ping_3673 125 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119947121 Common - ribosomal protein L22 Ping_3519 227 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 119944175 Common - leucyl aminopeptidase Ping_0395 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 119945324 Common - modification methylase, HemK family protein Ping_1608 227 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 119943997 Common - GTPase EngB Ping_0211 180 COG0218 COG0218, Predicted GTPase General function prediction only 119947240 Common - phosphatase Ping_3638 23 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 119946766 Common - ABC transporter binding protein inner membrane protein Ping_3159 184 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119944642 Common - hypothetical protein Ping_0881 4 COG3691 COG3691, Uncharacterized protein conserved in bacteria Function unknown 119946175 Common - Ferrochelatase Ping_2535 156 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 119947168 Common - flagellar hook-basal body complex subunit FliE Ping_3566 53 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 119944424 Common - phenylacetate-CoA oxygenase, PaaI subunit Ping_0652 42 COG3396 COG3396, Uncharacterized conserved protein Function unknown 119944790 Common - imidazolonepropionase Ping_1032 104 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 119944346 Common - ABC transporter ATP-binding protein Ping_0573 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 119945296 Common - ABC transporter ATP-binding protein Ping_1578 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 119945478 Common - putative aminopeptidase 2 Ping_1777 44 COG1362 LAP4, Aspartyl aminopeptidase Amino acid transport and metabolism 119946594 Common - ribosome recycling factor Ping_2973 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 119947118 Common - ribosomal protein L29 Ping_3516 56 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 119946509 Common - ABC-type transporter inner membrane protein Ping_2886 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 119944357 Common dksA RNA polymerase-binding dnaK suppressor protein DksA Ping_0584 116 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 119945690 Nonpathogen - hypothetical protein Ping_2007 1 None None None 119947275 Common - TRAP dicarboxylate transporter- DctP subunit Ping_3675 70 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119945308 Nonpathogen - hypothetical protein Ping_1591 4 None None None 119947015 Common - Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like protein Ping_3412 21 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 119944809 Common - heat shock protein DnaJ domain protein Ping_1051 139 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 119945156 Common - iron-sulfur cluster binding protein Ping_1420 95 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 119946141 Common - phage integrase family protein Ping_2496 103 COG0582 XerC, Integrase DNA replication, recombination, and repair 119946806 Common - bioH protein Ping_3200 147 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119944229 Nonpathogen - Xylose isomerase domain protein TIM barrel Ping_0452 7 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 119946101 Common - HNH endonuclease Ping_2451 26 None None None 119943898 Common - general secretion pathway protein L Ping_0105 23 COG3297 PulL, Type II secretory pathway, component PulL Intracellular trafficking and secretion 119944842 Common - hypothetical protein Ping_1084 49 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 119945769 Common - regulatory protein for cyclic-di-GMP, EAL domain Ping_2103 164 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119943953 Common - DNA adenine methylase Ping_0166 101 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 119945147 Common - FAD dependent oxidoreductase Ping_1411 8 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 119944387 Common - glycine betaine ABC transporter, binding protein inner membrane component Ping_0615 204 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 119946738 Common - predicted lipoprotein Ping_3122 2 None None None 119944091 Common - metal dependent phosphohydrolase Ping_0306 124 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 119944391 Common - hypothetical protein Ping_0619 27 None None None 119944568 Common prfC peptide chain release factor 3 Ping_0806 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 119943876 Common - hypothetical protein DUF195 Ping_0083 134 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 119945444 Nonpathogen - hypothetical protein Ping_1741 10 None None None 119945959 Common - Dihydroorotate oxidase Ping_2299 225 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 119944816 Common - anthranilate phosphoribosyltransferase Ping_1058 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 119944884 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ping_1128 202 COG0388 COG0388, Predicted amidohydrolase General function prediction only 119943835 Common - Frataxin family protein Ping_0042 44 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 119944713 Common - thermostable hemolysin Ping_0953 15 None None None 119944360 Common - hypothetical protein UPF0060 Ping_0587 79 COG1742 COG1742, Uncharacterized conserved protein Function unknown 119945046 Common - ABC sugar transporter inner membrane translocator Ping_1300 128 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 119946054 Common - Alcohol dehydrogenase, zinc-binding domain protein Ping_2403 157 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 119946124 Nonpathogen - hypothetical protein Ping_2476 2 None None None 119945450 Common - response regulator receiver protein Ping_1747 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119945554 Common - hypothetical protein Ping_1858 20 None None None 119947301 Nonpathogen - hypothetical protein Ping_3707 1 None None None 119944241 Common - F0F1-ATPase subunit, putative Ping_0465 17 None None None 119945548 Common - 2-amino-3-ketobutyrate coenzyme A ligase Ping_1852 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 119945739 Common - lipid A ABC exporter family, fused ATPase and inner membrane subunits Ping_2069 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 119946733 Common - SlyX family protein Ping_3117 35 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 119946076 Common - Gamma-glutamyltransferase Ping_2425 145 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 119947306 Common - putative glycoporin Ping_3712 11 None None None 119944869 Common - ribonucleotide-diphosphate reductase subunit alpha Ping_1112 204 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 119945164 Common - nitrous-oxide reductase Ping_1428 40 COG4263 NosZ, Nitrous oxide reductase Energy production and conversion 119946417 Common - chaperonin Cpn60, GroEL, large subunit of GroESL Ping_2791 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 119945203 Common - ATP-dependent protease La Ping_1467 210 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 119945593 Common - hypothetical protein Ping_1899 37 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 119946824 Common - DNA-binding protein HU alpha subunit Ping_3218 210 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 119945061 Nonpathogen - yecA family protein Ping_1317 1 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 119945227 Common - DNA-binding transcriptional repressor FabR Ping_1493 43 COG1309 AcrR, Transcriptional regulator Transcription 119946584 Common - lipid-A-disaccharide synthase Ping_2963 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 119945918 Common aat leucyl/phenylalanyl-tRNA--protein transferase Ping_2258 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 119947074 Common - Glutaredoxin-family domain protein Ping_3472 98 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 119947056 Common - cysteine/glutathione ABC transporter membrane/ATP-binding component Ping_3453 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 119946026 Common - MoxR-like ATPase Ping_2370 182 COG0714 COG0714, MoxR-like ATPases General function prediction only 119945005 Nonpathogen - hypothetical protein Ping_1257 1 None None None 119945248 Common - ABC transporter extracellular solute-binding protein, family 3 Ping_1517 161 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119946168 Common - filamentation induced by cAMP protein Fic Ping_2528 104 COG3177 COG3177, Uncharacterized conserved protein Function unknown 119943925 Common - TRAP dicarboxylate transporter, DctP subunit Ping_0135 103 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119947041 Common - translation elongation factor G Ping_3438 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 119947091 Nonpathogen - hypothetical protein Ping_3489 1 None None None 119946183 Common - cold-shock DNA-binding domain protein Ping_2543 178 COG1278 CspC, Cold shock proteins Transcription 119944734 Nonpathogen - hypothetical protein Ping_0975 1 None None None 119945599 Common - protein of unknown function DUF480 Ping_1905 41 COG3132 COG3132, Uncharacterized protein conserved in bacteria Function unknown 119944488 Common - RarD protein, DMT superfamily transporter Ping_0717 108 COG2962 RarD, Predicted permeases General function prediction only 119945730 Common - transcriptional regulator of LacI family protein Ping_2058 126 COG1609 PurR, Transcriptional regulators Transcription 119947025 Common - ribosomal protein L9 Ping_3422 197 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 119946443 Common - ABC amino acid transporter extracellular solute-binding protein, family 3 Ping_2818 116 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119947006 Common - molybdopterin-guanine dinucleotide biosynthesis protein B Ping_3403 106 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 119944420 Common - TRAP dicarboxylate transporter- DctP subunit Ping_0648 34 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119947097 Common - hypothetical protein Ping_3495 9 None None None 119945896 Common - hypothetical protein Ping_2236 12 None None None 119946911 Common - flavodoxin FldB Ping_3305 67 COG0716 FldA, Flavodoxins Energy production and conversion 119947290 Common - ABC phosphonate transporter ATP-binding protein Ping_3694 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 119945435 Common - magnesium and cobalt transport protein CorA Ping_1732 184 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 119944307 Common - PhoH family protein Ping_0534 198 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 119946206 Common - hypothetical protein Ping_2566 3 None None None 119945520 Common - hypothetical protein Ping_1824 2 None None None 119946602 Common - hypothetical protein Ping_2981 15 COG4454 COG4454, Uncharacterized copper-binding protein Inorganic ion transport and metabolism 119946269 Common - hypothetical protein Ping_2632 4 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 119946274 Common - conserved hypothetical DnaJ domain protein Ping_2638 8 None None None 119945471 Common - ABC transporter ATP-binding protein, predicted for phosphonate Ping_1769 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 119944752 Common - peptidase S16, lon domain protein Ping_0994 25 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 119943906 Common metH B12-dependent methionine synthase Ping_0113 176 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 119945276 Common - deoxyribodipyrimidine photolyase-related protein Ping_1551 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 119947237 Common - transporter major facilitator superfamily MFS_1 Ping_3635 30 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944396 Common - cell division ATP-binding protein FtsE Ping_0624 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 119947184 Nonpathogen fliL flagellar protein FliL Ping_3582 1 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 119944537 Common - bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase Ping_0771 216 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119946379 Common - 6-phosphogluconolactonase Ping_2753 126 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 119945822 Common - protein containing tetratricopeptide (TPR) repeat Ping_2162 5 None None None 119945645 Common - ABC transporter substrate binding inner membrane protein Ping_1957 142 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 119946355 Common - glycine cleavage system T protein Ping_2726 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 119943870 Common - Peptidoglycan-binding LysM Ping_0077 44 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 119945929 Common - sulfatase Ping_2269 41 COG3083 COG3083, Predicted hydrolase of alkaline phosphatase superfamily General function prediction only 119945511 Common - Integrase, catalytic region Ping_1815 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 119944010 Common - xylulokinase Ping_0224 184 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 119946243 Common - acetyl-CoA acetyltransferases Ping_2605 181 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 119946089 Common - Phosphotransferase system, phosphocarrier protein HPr Ping_2439 130 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 119945962 Common - ATP-dependent helicase, DinG family protein Ping_2302 144 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 119943847 Common - ribosomal protein L33 Ping_0054 127 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 119944535 Common - phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I Ping_0769 237 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 119945011 Nonpathogen - hypothetical protein Ping_1263 4 None None None 119946863 Common - peptidylprolyl isomerase, FKBP-type Ping_3257 135 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 119946044 Common - hypothetical protein Ping_2389 5 None None None 119945129 Common - nucleoside recognition domain protein Ping_1392 20 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 119946612 Common - Urease accessory protein UreD Ping_2991 60 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 119945263 Common - CMP/dCMP deaminase, zinc-binding Ping_1534 10 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 119945267 Common - transposase IS4 family protein Ping_1539 6 None None None 119945171 Nonpathogen - hypothetical protein Ping_1435 1 None None None 119946676 Nonpathogen - hypothetical protein Ping_3057 1 None None None 119946042 Common - putative signal transduction protein with Nacht domain Ping_2386 11 COG5635 COG5635, Predicted NTPase (NACHT family) Signal transduction mechanisms 119946728 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_3112 76 COG1204 COG1204, Superfamily II helicase General function prediction only 119946207 Common - nuclease (SNase domain protein) Ping_2567 19 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 119944283 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_0509 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119945258 Common - carbonic anhydrase Ping_1529 42 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 119946604 Nonpathogen - hypothetical protein Ping_2983 1 None None None 119946325 Common - Auxin Efflux Carrier Ping_2696 89 COG0679 COG0679, Predicted permeases General function prediction only 119946057 Common - ABC phosphate transporter ATP-binding protein Ping_2406 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 119945724 Common - sulphate transporter Ping_2050 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 119945584 Common - 4-aminobutyrate aminotransferase Ping_1889 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 119945356 Common - hypothetical protein Ping_1644 3 None None None 119943971 Common - hypothetical protein Ping_0184 4 None None None 119944825 Common - LrgB family protein Ping_1067 82 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 119944507 Common - electron transport complex, RnfABCDGE type, C subunit Ping_0736 74 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 119944786 Common - peptide methionine sulfoxide reductase Ping_1028 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 119946929 Common - peptide deformylase Ping_3323 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 119946984 Common - aspartate kinase Ping_3379 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 119946913 Common - formate acetyltransferase Ping_3307 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 119944293 Common - Pirin domain-containing protein Ping_0520 135 COG1741 COG1741, Pirin-related protein General function prediction only 119945792 Common - aldehyde dehydrogenase Ping_2128 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119944513 Common - ATP-dependent Clp protease adaptor protein ClpS Ping_0742 120 COG2127 COG2127, Uncharacterized conserved protein Function unknown 119944238 Nonpathogen - hypothetical protein Ping_0462 1 None None None 119947216 Common - sugar nucleotide epimerase Ping_3614 108 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 119944172 Common - Mg chelatase, subunit ChlI Ping_0392 200 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 119944131 Common - dihydroxy-acid dehydratase Ping_0346 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 119945127 Common - copper resistance D domain protein Ping_1389 22 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 119944037 Nonpathogen - hypothetical protein Ping_0251 1 None None None 119944138 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase Ping_0356 62 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 119946542 Common - hypothetical protein Ping_2921 22 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 119945217 Common - hypothetical protein DUF462 Ping_1482 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 119947239 Common - transcriptional regulator of ArsR family protein Ping_3637 123 COG0640 ArsR, Predicted transcriptional regulators Transcription 119944889 Common - rare lipoprotein A Ping_1133 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 119943908 Common - MOSC domain containing protein Ping_0115 123 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 119945757 Common - GCN5-related N-acetyltransferase Ping_2089 16 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 119946296 Common - hypothetical protein Ping_2663 10 None None None 119947263 Common - UDP-sugar diphosphatase Ping_3661 38 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119945504 Common - CMP/dCMP deaminase, zinc-binding Ping_1808 67 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 119946388 Common - pyruvate phosphate dikinase Ping_2762 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 119945210 Common - porin, Gram-negative type Ping_1474 27 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 119945083 Common - transcriptional regulator of MerR family protein Ping_1339 126 COG0789 SoxR, Predicted transcriptional regulators Transcription 119946826 Common - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Ping_3220 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 119946690 Common - 1-acyl-glycerol-3-phosphate acyltransferase PlsC Ping_3072 103 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 119946788 Common - hypothetical protein Ping_3181 17 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119944604 Common - hypothetical protein Ping_0842 9 None None None 119944084 Common - glucose-1-phosphate adenylyltransferase Ping_0299 171 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 119945332 Common pspC phage shock protein C Ping_1616 30 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 119945708 Common - YheO domain protein Ping_2028 49 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 119946711 Common - BLUF domain protein Ping_3094 39 None None None 119944894 Common - MraZ protein Ping_1138 134 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 119944336 Common - peptide ABC transporter, protein inner membrane binding component Ping_0563 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119945851 Common - MATE efflux family protein Ping_2191 145 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 119946363 Common - universal stress protein containing UspA domain Ping_2734 27 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119944254 Common - prepilin peptidase dependent protein D Ping_0478 8 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 119946977 Common - putative lipoprotein Ping_3372 38 COG4764 COG4764, Uncharacterized protein conserved in bacteria Function unknown 119946281 Common - Endoribonuclease L-PSP Ping_2646 126 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 119946909 Common - thiol:disulfide interchange protein DsbC Ping_3303 69 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 119945378 Common - seryl-tRNA synthetase Ping_1666 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 119944547 Nonpathogen - hypothetical protein Ping_0783 2 None None None 119946865 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_3259 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119944630 Common - acriflavin resistance protein Ping_0869 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 119945133 Nonpathogen - hypothetical protein Ping_1396 1 None None None 119944063 Common - ethanolamine transproter Ping_0278 150 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 119944252 Nonpathogen - methylation site containing protein Ping_0476 1 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 119945711 Common - Asp/Glu racemase Ping_2031 43 COG3473 COG3473, Maleate cis-trans isomerase Secondary metabolites biosynthesis, transport, and catabolism 119944675 Common - DNA repair protein RecN Ping_0914 201 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 119946959 Common - 2-isopropylmalate synthase Ping_3353 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 119945371 Common - hypothetical protein Ping_1659 4 None None None 119944978 Common - sensor histidine kinase with ATPase domain Ping_1229 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945872 Common - protein-export membrane protein SecD Ping_2212 218 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 119946505 Common - BolA family protein Ping_2882 55 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 119944400 Common - tRNA (uracil-5-)-methyltransferase Ping_0628 154 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 119944882 Common - ribonuclease G Ping_1126 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 119945726 Common - transaldolase B Ping_2054 178 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 119943890 Common - general secretion pathway protein D Ping_0097 142 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 119944605 Common - chaperonin Cpn10, GroES, small subunit of GroESL Ping_0843 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 119945220 Nonpathogen - hypothetical protein Ping_1486 1 None None None 119945120 Common - copper-translocating P-type ATPase Ping_1381 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 119944551 Common - hypothetical protein Ping_0788 2 None None None 119945208 Common - integral membrane protein, YccS/YhfK family protein Ping_1472 51 COG1289 COG1289, Predicted membrane protein Function unknown 119944481 Common - TRAP dicarboxylate transporter, DctM subunit Ping_0710 136 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119944845 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III Ping_1087 221 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 119946498 Common petA ubiquinol-cytochrome c reductase iron-sulfur subunit PetA Ping_2874 98 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 119946792 Common - fused DNA polymerase 5'->3' exonuclease and 3'->5' polymerase and 3'->5' exonuclease Ping_3185 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 119946937 Common - ABC-type uncharacterized transport system, periplasmic component Ping_3331 29 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 119944522 Common - Na(+)-translocating NADH-quinone reductase subunit F Ping_0751 163 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 119947310 Common - DNA replication and repair protein RecF Ping_3716 166 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 119944472 Common - hypothetical protein Ping_0701 12 COG4902 COG4902, Uncharacterized protein conserved in archaea Function unknown 119945201 Common - ATP-dependent Clp protease, proteolytic subunit ClpP Ping_1465 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 119943885 Common - hypothetical protein Ping_0092 19 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 119944951 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_1199 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946787 Common - peptidase M50 Ping_3180 30 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 119946704 Common - Glucose dehydrogenase Ping_3086 58 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 119945184 Common - hypothetical protein Ping_1448 30 COG3672 COG3672, Predicted periplasmic protein Function unknown 119945480 Common - esterase/lipase/thioesterase family protein Ping_1779 75 COG0657 Aes, Esterase/lipase Lipid metabolism 119945513 Nonpathogen - hypothetical protein Ping_1817 1 None None None 119946021 Common - 4-alpha-glucanotransferase Ping_2365 119 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 119944070 Common - tRNA 2-selenouridine synthase Ping_0285 65 COG2603 COG2603, Predicted ATPase General function prediction only 119944137 Common - isochorismate synthases Ping_0355 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119947250 Common - Dihydrodipicolinate reductase Ping_3648 214 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 119945517 Common - diguanylate cyclase Ping_1821 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119946591 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ping_2970 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 119945861 Common - lipoprotein releasing system, transmembrane protein, LolC/E family protein Ping_2201 198 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 119945573 Common - band 7 protein Ping_1878 219 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 119946462 Common - Carbamoyl-phosphate synthase L chain, ATP-binding Ping_2837 235 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 119943923 Common - TRAP dicarboxylate transporter, DctM subunit Ping_0133 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119944529 Common - hypothetical protein Ping_0762 10 None None None 119945932 Common - recombination protein RecR Ping_2272 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 119945107 Common - hypothetical protein Ping_1367 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 119945969 Common - alpha/beta hydrolase fold Ping_2309 128 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119945997 Common - hypothetical protein DUF540 Ping_2339 42 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 119946575 Common crl DNA-binding transcriptional regulator Crl Ping_2954 13 None None None 119947247 Common - GCN5-related N-acetyltransferase Ping_3645 34 COG0456 RimI, Acetyltransferases General function prediction only 119945233 Nonpathogen - hypothetical protein DUF1555 Ping_1500 8 None None None 119946760 Nonpathogen - hypothetical protein Ping_3153 1 None None None 119946599 Nonpathogen - hypothetical protein Ping_2978 2 None None None 119945564 Common prpB 2-methylisocitrate lyase Ping_1869 136 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 119947325 Common - ATP synthase F1, alpha subunit Ping_3732 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 119944623 Common - hypothetical protein Ping_0862 23 COG3076 COG3076, Uncharacterized protein conserved in bacteria Function unknown 119946461 Common - hypothetical protein DUF548 Ping_2836 49 None None None 119944508 Common - electron transport complex, RnfABCDGE type, B subunit Ping_0737 124 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 119946922 Common cls cardiolipin synthetase Ping_3316 147 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 119943958 Common - inner membrane protein DUF205 Ping_0171 169 COG0344 COG0344, Predicted membrane protein Function unknown 119946284 Common - transporter major facilitator superfamily MFS_1 Ping_2649 114 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119945321 Common - Outer membrane lipoprotein OmlA Ping_1605 62 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 119945857 Common - diguanylate cyclase/phosphodiesterase Ping_2197 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119945195 Common - exodeoxyribonuclease V, beta subunit Ping_1459 218 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 119946856 Common - hypothetical protein Ping_3250 8 None None None 119945140 Common - phenylalanyl-tRNA synthetase, beta subunit Ping_1404 246 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 119945031 Common - Holliday junction resolvase YqgF Ping_1285 183 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 119946469 Common - ABC transporter ATP-binding protein Ping_2844 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 119946346 Common - cytochrome c oxidase, subunit II Ping_2717 161 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 119946028 Common thiE thiamine-phosphate pyrophosphorylase Ping_2372 199 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 119946222 Nonpathogen - hypothetical protein Ping_2583 1 None None None 119943820 Common - hypothetical protein Ping_0026 5 None None None 119944573 Common - ATP-dependent metalloprotease FtsH Ping_0811 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 119945096 Common - monovalent cation/proton antiporter, pH regulation subunit F Ping_1354 77 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 119946684 Nonpathogen - hypothetical protein Ping_3065 1 None None None 119944194 Common - ABC polar amino acid transporter inner membrane protein Ping_0414 170 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119947093 Nonpathogen - hypothetical protein Ping_3491 1 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 119945409 Common - ROK family protein Ping_1702 164 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 119946158 Nonpathogen - hypothetical protein Ping_2518 5 None None None 119947036 Common - hypothetical protein Ping_3433 9 None None None 119946985 Common - alanyl-tRNA synthetase Ping_3380 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119945841 Common - hypothetical protein Ping_2181 3 None None None 119946775 Common glpK glycerol kinase Ping_3168 177 COG0554 GlpK, Glycerol kinase Energy production and conversion 119944541 Common - DegT/DnrJ/EryC1/StrS aminotransferase Ping_0775 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 119944009 Common - short-chain dehydrogenase/reductase SDR Ping_0223 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 119947173 Common flgI flagellar basal body P-ring protein Ping_3571 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 119946875 Common - peptidylprolyl isomerase, FKBP-type Ping_3269 131 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 119947131 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_3529 168 COG0583 LysR, Transcriptional regulator Transcription 119947045 Common - intraceullular sulfur oxidation protein of DsrE family protein Ping_3442 38 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 119947192 Nonpathogen - hypothetical protein Ping_3590 1 None None None 119946899 Common - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Ping_3293 104 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 119945316 Nonpathogen - hypothetical protein Ping_1600 1 None None None 119945786 Common - oxidoreductase alpha (molybdopterin) subunit Ping_2122 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 119945873 Common - preprotein translocase, YajC subunit Ping_2213 165 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 119946551 Common - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Ping_2930 125 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 119944030 Common - hypothetical protein Ping_0244 7 None None None 119945945 Common - sensor histidine kinase with ATPase domain Ping_2285 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945346 Nonpathogen - hypothetical protein Ping_1631 2 None None None 119946815 Common - glutaredoxin 3 Ping_3209 127 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 119946843 Common - GTP-binding protein, HSR1-related Ping_3237 218 COG2262 HflX, GTPases General function prediction only 119946940 Common - diaminopimelate epimerase Ping_3334 150 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 119944007 Common - diguanylate cyclase/phosphodiesterase Ping_0221 177 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946681 Common - Helix-hairpin-helix DNA-binding, class 1 Ping_3062 48 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 119944469 Common - putative methyltransferase Ping_0698 48 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 119947155 Common - PTS system fructose-specific IIBC protein Ping_3553 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 119945183 Common - peptide methionine sulfoxide reductase Ping_1447 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 119945388 Common - Ferredoxin--NADP(+) reductase Ping_1677 105 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 119944040 Common - Methyltransferase type 11 Ping_0254 19 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 119945412 Common - hypothetical protein DUF81 Ping_1706 83 COG0730 COG0730, Predicted permeases General function prediction only 119947138 Common metQ DL-methionine transporter substrate-binding subunit Ping_3536 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 119945740 Common betI transcriptional regulator BetI Ping_2070 54 COG1309 AcrR, Transcriptional regulator Transcription 119945662 Common pssA phosphatidylserine synthase Ping_1975 34 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 119946519 Common - magnesium transporter Ping_2896 170 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 119947081 Common - ribonuclease PH Ping_3479 180 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 119943963 Common - fused tRNA nucleotidyl transferase and 2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase Ping_0176 185 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 119944380 Common ubiH 2-octaprenyl-6-methoxyphenol hydroxylase UbiH Ping_0607 124 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 119944743 Common mtlR mannitol repressor protein Ping_0984 18 COG3722 MtlR, Transcriptional regulator Transcription 119946091 Common - glucose-specific PTS system component Ping_2441 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 119946394 Common - hypothetical protein Ping_2768 33 COG4134 COG4134, ABC-type uncharacterized transport system, periplasmic component General function prediction only 119945149 Common - hypothetical protein Ping_1413 6 None None None 119944275 Common - DNA mismatch repair protein Ping_0501 31 COG3066 MutH, DNA mismatch repair protein DNA replication, recombination, and repair 119946032 Common - ABC transporter substrate binding inner membrane protein Ping_2376 151 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 119943941 Nonpathogen - hypothetical protein Ping_0154 1 None None None 119945697 Common - glycoside hydrolase, clan GH-D Ping_2014 44 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 119945763 Common - ABC transporter ATP-binding protein Ping_2096 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119945251 Nonpathogen - hypothetical protein Ping_1521 2 None None None 119944146 Common - thiazole biosynthesis protein ThiH Ping_0365 54 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 119944700 Common - cytochrome c oxidase, cbb3-type, subunit I Ping_0939 145 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 119945577 Common - hypothetical protein Ping_1882 4 None None None 119944022 Nonpathogen - hypothetical protein Ping_0236 1 None None None 119946476 Common - hypothetical protein DUF1294 Ping_2851 51 COG3326 COG3326, Predicted membrane protein Function unknown 119944567 Common - transposase, IS4 family protein Ping_0805 32 COG5433 COG5433, Transposase DNA replication, recombination, and repair 119945978 Nonpathogen - hypothetical protein Ping_2318 3 None None None 119945537 Common - diguanylate cyclase/phosphodiesterase Ping_1841 179 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946095 Common - type IV pilus assembly PilZ Ping_2445 5 None None None 119946616 Common - UreE urease accessory domain protein Ping_2995 62 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 119943988 Common - ATP-dependent endonuclease of the OLD family protein Ping_0201 17 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 119944615 Common - 3-mercaptopyruvate sulfurtransferase Ping_0854 144 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 119944708 Common - hypothetical protein Ping_0947 8 None None None 119944053 Common - peptidase M14, carboxypeptidase A Ping_0268 31 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 119944460 Common - uncharacterized iron-regulated protein Ping_0688 30 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 119945499 Common - hypothetical protein DUF81 Ping_1803 28 None None None 119946566 Nonpathogen - hypothetical protein Ping_2945 1 None None None 119944795 Common - protease Do Ping_1037 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 119945621 Nonpathogen - hypothetical protein Ping_1931 1 None None None 119944264 Common nagA N-acetylglucosamine-6-phosphate deacetylase Ping_0489 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 119945424 Common - zinc finger, CDGSH-type domain protein Ping_1719 24 COG3369 COG3369, Uncharacterized conserved protein Function unknown 119946342 Common - transmembrane cytochrome oxidase complex biogenesis factor Ping_2713 34 COG3346 COG3346, Uncharacterized conserved protein Function unknown 119946737 Common - 3-dehydroquinate dehydratase, type II Ping_3121 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 119944581 Common - tRNA pseudouridine synthase B Ping_0819 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 119943845 Common - hypothetical protein DUF1568 Ping_0052 18 None None None 119944427 Common - Enoyl-CoA hydratase/isomerase Ping_0655 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 119945647 Common - ABC transporter for sugar ATP-binding protein Ping_1959 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119945903 Common - hypothetical protein Ping_2243 36 COG4628 COG4628, Uncharacterized conserved protein Function unknown 119944970 Common - hypothetical protein DUF1538 Ping_1220 23 None None None 119946998 Common - metal dependent phosphohydrolase Ping_3393 118 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 119946717 Nonpathogen - hypothetical protein Ping_3101 1 None None None 119946639 Common - periplasmic protein thiol--disulphide oxidoreductase DsbE Ping_3018 131 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 119946370 Common - ABC transporter binding protein inner membrane protein Ping_2744 192 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 119946426 Common - transporter major facilitator superfamily MFS_1 Ping_2800 159 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944854 Common - deoxyribonuclease of TatD family protein Ping_1096 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 119944937 Common - Integrase, catalytic region Ping_1183 146 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947208 Common - transcriptional regulator of AsnC/Lrp family protein Ping_3606 157 COG1522 Lrp, Transcriptional regulators Transcription 119945494 Common - bicyclomycin/multidrug efflux system Ping_1796 137 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944651 Common - hypothetical protein Ping_0890 113 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 119944895 Common - S-adenosyl-methyltransferase MraW Ping_1139 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 119944969 Common - (NiFe) hydrogenase maturation protein HypF Ping_1218 116 COG0068 HypF, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 119946126 Common - hypothetical protein Ping_2478 37 COG2378 COG2378, Predicted transcriptional regulator Transcription 119945023 Common - threonine synthase Ping_1277 181 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 119946251 Common - ribosomal protein S4 Ping_2613 219 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 119945452 Common - ATP synthase B subunit (AtpF) Ping_1749 11 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119943976 Common - O-succinylbenzoic acid--CoA ligase Ping_0189 209 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119946645 Common - heme exporter protein CcmA Ping_3024 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 119945007 Nonpathogen - gas vesicle protein G Ping_1259 2 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 119945826 Common - molybdenum ABC transporter, periplasmic molybdate-binding protein Ping_2166 115 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 119945280 Common - putative lipoprotein Ping_1556 12 None None None 119944143 Common - adenylyl transferase Ping_0362 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 119945240 Common - cysteine desulfurase activator complex subunit SufB Ping_1508 185 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 119945600 Common - ADP-ribosylation/Crystallin J1 Ping_1906 29 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 119945610 Common - ABC polar amino acid transporter inner membrane protein Ping_1919 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119945986 Common - chromate transporter, chromate ion transporter (CHR) family protein Ping_2327 116 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 119944350 Common - Ferric reductase domain protein transmembrane component, N-terminal domain Ping_0577 74 COG2717 COG2717, Predicted membrane protein Function unknown 119946173 Common - hypothetical protein Ping_2533 6 None None None 119944107 Common - hypothetical protein DUF1243 Ping_0322 37 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 119945446 Common - hypothetical protein Ping_1743 36 COG4628 COG4628, Uncharacterized conserved protein Function unknown 119945278 Common - multiple antibiotic resistance (MarC)-related proteins Ping_1553 102 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 119944800 Common - cytochrome B561 Ping_1042 85 COG3038 CybB, Cytochrome B561 Energy production and conversion 119946757 Common - TRAP dicarboxylate transporter- DctP subunit Ping_3150 86 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 119944215 Nonpathogen - hypothetical protein Ping_0437 9 None None None 119946965 Common - type I secretion outer membrane protein, TolC family protein Ping_3360 139 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 119945882 Common - Paraquat-inducible protein A Ping_2222 53 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 119945875 Common - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Ping_2215 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 119944710 Common - protein containing tetratricopeptide (TPR) repeat Ping_0950 15 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 119946166 Nonpathogen - hypothetical protein Ping_2526 1 None None None 119947105 Common - ribosomal protein L36 Ping_3503 137 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 119944860 Common - formyltetrahydrofolate deformylase Ping_1102 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 119945461 Nonpathogen - hypothetical protein Ping_1759 2 None None None 119945015 Common - sodium/calcium exchanger membrane region Ping_1267 33 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 119944359 Common - hypothetical protein Ping_0586 20 None None None 119945468 Nonpathogen - hypothetical protein Ping_1766 2 None None None 119946473 Common - hemagglutinin/hemolysin-related protein Ping_2848 159 None None None 119945737 Common - hypothetical protein Ping_2066 24 None None None 119944268 Common - type II secretion system protein (twitching motility protein) Ping_0494 216 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 119947265 Nonpathogen - predicted 3-isopropylmalate dehydrogenase Ping_3663 2 None None None 119946143 Common - heat shock protein DnaJ domain protein Ping_2499 26 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 119944912 Common - mutator MutT protein Ping_1156 147 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 119944818 Common - anthranilate synthase component I Ping_1060 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 119946227 Common - ABC phosphate transporter periplasmic phosphate-binding protein Ping_2588 139 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 119945682 Common - alpha/beta hydrolase fold Ping_1998 156 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119945998 Common - CheY-like chemotaxis protein, response regulator receiver Ping_2340 37 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 119945559 Common - response regulator receiver and unknown domain protein Ping_1864 68 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 119946315 Common - CTP pyrophosphohydrolase Ping_2684 125 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 119944649 Common - Rhomboid family protein Ping_0888 20 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 119944181 Nonpathogen - hypothetical protein Ping_0401 1 None None None 119946895 Common - prolyl-tRNA synthetase Ping_3289 247 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119944389 Common - KpsF/GutQ family protein Ping_0617 167 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 119946154 Common - von Willebrand factor, type A Ping_2514 31 COG2425 COG2425, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 119946709 Common - hypothetical protein DUF1568 Ping_3091 18 None None None 119947271 Common - transposase IS200-family protein Ping_3671 69 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944465 Common - inner membrane protein DUF368 Ping_0693 46 COG2035 COG2035, Predicted membrane protein Function unknown 119947079 Common - UDP-glucose 4-epimerase Ping_3477 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 119943896 Common - general secretion pathway protein J Ping_0103 32 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 119945363 Nonpathogen - hypothetical protein Ping_1651 1 None None None 119945561 Common - putative AcnD-accessory protein PrpF Ping_1866 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 119945457 Common - hypothetical protein Ping_1754 9 COG2841 COG2841, Uncharacterized protein conserved in bacteria Function unknown 119946752 Common - ADP-ribose pyrophosphatase Ping_3145 22 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 119944456 Common - Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase Ping_0684 31 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 119945666 Common cysB transcriptional regulator CysB Ping_1979 191 COG0583 LysR, Transcriptional regulator Transcription 119945586 Common - hypothetical protein UPF0052 and CofD Ping_1891 88 COG0391 COG0391, Uncharacterized conserved protein Function unknown 119946114 Common - phage integrase Ping_2464 85 None None None 119945154 Common - FAD linked oxidase domain protein Ping_1418 199 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 119944723 Common - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Ping_0963 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 119946614 Common - urease, beta subunit Ping_2993 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 119945777 Common - hypothetical protein Ping_2112 4 None None None 119946832 Nonpathogen - hypothetical protein Ping_3226 1 None None None 119944100 Common - Chain length determinant protein-like protein Ping_0315 12 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 119945395 Common pfaA polyunsaturated fatty acid synthase PfaA Ping_1684 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 119944897 Common - Peptidoglycan glycosyltransferase Ping_1141 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 119944967 Common - Hydrogen dehydrogenase Ping_1216 190 COG1941 FrhG, Coenzyme F420-reducing hydrogenase, gamma subunit Energy production and conversion 119944827 Common - phosphoribosylformylglycinamidine cyclo-ligase Ping_1069 230 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 119946061 Common - hypothetical protein Ping_2410 5 None None None 119945677 Common - Aspartate-semialdehyde dehydrogenase Ping_1993 172 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 119944874 Common - 3-phosphoshikimate 1-carboxyvinyltransferase Ping_1117 230 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 119945552 Common - peptidylprolyl isomerase, FKBP-type Ping_1856 128 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 119944563 Common - Adenylyl-sulfate kinase Ping_0800 144 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 119944822 Common - UTP-glucose-1-phosphate uridylyltransferase GalU Ping_1064 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 119945832 Common napC nitrate reductase periplasmic cytochrome c-type protein NapC Ping_2172 46 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 119945525 Common - thiol-disulfide isomerase and thioredoxins Ping_1829 65 None None None 119944548 Common - predicted deacetylase Ping_0784 3 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 119945961 Common - peptidase M22, glycoprotease Ping_2301 192 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 119944206 Common - uncharacterized protein involved in exopolysaccharide biosynthesis-like protein Ping_0427 60 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 119944080 Common - arginine repressor Ping_0295 72 COG1438 ArgR, Arginine repressor Transcription 119944770 Common - chromosome replication initiation inhibitor protein Ping_1012 106 COG0583 LysR, Transcriptional regulator Transcription 119945075 Common - aminopeptidase B Ping_1331 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 119946668 Common - potassium efflux system protein Ping_3047 186 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 119946404 Common - short-chain dehydrogenase/reductase SDR Ping_2778 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 119944538 Common - CDP-6-deoxy-delta-3,4-glucoseen reductase Ping_0772 158 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 119944903 Common - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Ping_1147 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 119946960 Common - DNA topoisomerase IV subunit B Ping_3354 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 119946624 Common - methionine aminopeptidase, type I Ping_3003 243 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 119945500 Common - hypothetical transmembrane protein DUF6 Ping_1804 195 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 119944766 Common gltD glutamate synthase subunit beta Ping_1008 197 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 119945796 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ping_2133 163 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 119944479 Common - TRAP dicarboxylate transporter, DctP subunit Ping_0708 99 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119945322 Common - Shikimate/quinate 5-dehydrogenase Ping_1606 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 119944631 Common - integral inner membrane protein UPF0126 Ping_0870 133 COG2860 COG2860, Predicted membrane protein Function unknown 119944087 Common - predicted DNA-binding transcriptional regulator, helix-turn-helix domain Ping_0302 7 COG1396 HipB, Predicted transcriptional regulators Transcription 119945703 Common - heavy metal translocating P-type ATPase Ping_2020 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 119945113 Nonpathogen - hypothetical protein Ping_1374 2 None None None 119945686 Nonpathogen - hypothetical protein Ping_2003 1 None None None 119944668 Common - transcriptional regulator of DeoR family protein Ping_0907 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 119946108 Common - RimK domain protein ATP-grasp Ping_2458 28 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 119943806 Common - hypothetical protein DUF877 Ping_0012 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 119944114 Common - glycosyl transferase, family 9 Ping_0329 105 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 119944933 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Ping_1178 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 119946821 Common - tRNA-dihydrouridine synthase Ping_3215 213 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 119946651 Common - lipoyl synthase Ping_3030 191 COG0320 LipA, Lipoate synthase Coenzyme metabolism 119947128 Common - ATPase Ping_3526 48 COG1444 COG1444, Predicted P-loop ATPase fused to an acetyltransferase General function prediction only 119946582 Common - DNA polymerase III, alpha subunit Ping_2961 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 119945003 Common - gas vesicle protein GvpN Ping_1255 97 COG0714 COG0714, MoxR-like ATPases General function prediction only 119945927 Common - 37kDa nucleoid-associated protein Ping_2267 31 COG3081 COG3081, Nucleoid-associated protein General function prediction only 119943914 Common - hypothetical protein Ping_0121 2 None None None 119945976 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_2316 167 COG0583 LysR, Transcriptional regulator Transcription 119946861 Common - hypothetical protein containing methylation site Ping_3255 9 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 119946632 Common - hypothetical protein DUF1049 Ping_3011 21 COG3771 COG3771, Predicted membrane protein Function unknown 119947070 Common - Chorismate lyase Ping_3468 43 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 119943930 Common - Integrase, catalytic region Ping_0141 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 119946804 Common - hypothetical protein Ping_3198 21 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 119946533 Common - ABC alpha-glucoside transporter extracellular solute-binding protein, family 1 Ping_2910 31 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119945173 Common - putative ABC transporter ATP-binding protein Ping_1437 247 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 119944754 Common - anti-ECFsigma factor, ChrR Ping_0996 33 COG3806 ChrR, Transcriptional activator Transcription 119944028 Common - phage transcriptional regulator, AlpA Ping_0242 3 COG3311 AlpA, Predicted transcriptional regulator Transcription 119946889 Common - lysine 2,3-aminomutase YodO family protein Ping_3283 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 119944686 Common - peptidase S49 Ping_0925 170 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 119943928 Common - GntR domain-containing uxu operon regulator Ping_0138 144 COG2186 FadR, Transcriptional regulators Transcription 119946353 Common - ATP-dependent RNA helicase DbpA Ping_2724 231 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119943849 Common - DNA repair protein RadC Ping_0056 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 119946453 Common - alpha-L-glutamate ligases, ribosomal protein S6 modification protein of RimK family protein Ping_2828 163 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 119947144 Common - Alcohol dehydrogenase GroES domain protein Ping_3542 178 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 119944032 Common - Resolvase, N-terminal domain Ping_0246 126 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 119946563 Nonpathogen - hypothetical protein Ping_2942 1 None None None 119946267 Common - DNA repair protein RadA Ping_2630 222 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 119944375 Common - 5-formyltetrahydrofolate cyclo-ligase Ping_0602 175 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 119946672 Nonpathogen - hypothetical protein Ping_3053 1 None None None 119945643 Common - Alcohol dehydrogenase, zinc-binding domain protein Ping_1955 139 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 119947063 Common - ABC-2 type transporter permease protein Ping_3461 139 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 119944248 Common hlyD Secretion protein HlyD Ping_0472 173 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119946046 Common - MotA/TolQ/ExbB proton channel Ping_2393 134 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 119947013 Common - hypothetical protein Ping_3410 5 None None None 119946606 Common - fused histidine kinase sensor and response regulator containing ATPase domain Ping_2985 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119947111 Common - ribosomal protein L6 Ping_3509 219 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 119943817 Common - Rhs element Vgr protein Ping_0023 55 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 119947281 Common - phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Ping_3685 60 COG3709 COG3709, Uncharacterized component of phosphonate metabolism Inorganic ion transport and metabolism 119945198 Common - hypothetical protein Ping_1462 11 None None None 119944516 Common - BolA family protein Ping_0745 86 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 119944945 Common - transcriptional regulator of LuxR family protein Ping_1192 217 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 119946678 Nonpathogen - hypothetical protein Ping_3059 1 None None None 119945383 Nonpathogen - hypothetical protein Ping_1672 1 None None None 119944671 Common - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 Ping_0910 193 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 119946245 Common - nitroreductase Ping_2607 97 COG0778 NfnB, Nitroreductase Energy production and conversion 119947323 Common - F0F1 ATP synthase subunit beta Ping_3730 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 119945980 Nonpathogen - Phosphoglycerate mutase Ping_2320 2 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 119945833 Common napB nitrate reductase periplasmic cytochrome c-type subunit NapB Ping_2173 41 COG3043 NapB, Nitrate reductase cytochrome c-type subunit Energy production and conversion 119943944 Common - penicillin-binding protein, 1A family protein Ping_0157 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 119946087 Nonpathogen - hypothetical protein Ping_2437 1 None None None 119943985 Common - Protoporphyrinogen oxidase Ping_0198 34 COG4635 HemG, Flavodoxin Energy production and conversion / Coenzyme metabolism 119946743 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_3129 190 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119944704 Common - Allergen V5/Tpx-1 family protein Ping_0943 21 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 119945355 Common - band 7 protein Ping_1643 209 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 119943853 Common - transcriptional repressor protein MetJ Ping_0060 23 COG3060 MetJ, Transcriptional regulator of met regulon Transcription / Amino acid transport and metabolism 119945256 Nonpathogen - K+-dependent Na+/Ca+ exchanger related-protein Ping_1526 2 None None None 119946880 Common - ribosomal protein S20 Ping_3274 203 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 119944715 Common - universal stress protein containing UspA domain Ping_0955 27 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119944313 Common - TRAP dicarboxylate transporter, DctP subunit Ping_0540 99 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119947177 Common flgE flagellar hook protein FlgE Ping_3575 127 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 119946050 Common - hypothetical protein DUF81 Ping_2398 51 COG0730 COG0730, Predicted permeases General function prediction only 119944170 Common - Carbonate dehydratase Ping_0390 147 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 119945268 Common - hypothetical protein Ping_1540 7 None None None 119943878 Common - D-fructose-6-phosphate amidotransferase Ping_0085 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 119945579 Common - nucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein Ping_1884 103 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 119947019 Nonpathogen - hypothetical protein Ping_3416 2 None None None 119944875 Nonpathogen - hypothetical protein Ping_1118 1 None None None 119946445 Common - ABC polar amino acid transporter inner membrane protein Ping_2820 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119946009 Common - serine/threonine protein kinase Ping_2351 39 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 119946082 Common - ABC polar amino acid transporter inner membrane protein Ping_2431 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119947193 Nonpathogen - hypothetical protein Ping_3591 1 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 119947051 Common - ribosomal protein L10 Ping_3448 206 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 119945889 Common - 3-isopropylmalate dehydrogenase Ping_2229 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 119947308 Common - chromosomal replication initiator protein DnaA Ping_3714 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 119944862 Common asnB asparagine synthetase B Ping_1104 160 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 119946330 Common - cold-shock DNA-binding domain protein Ping_2701 30 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 119945489 Common - amine oxidase Ping_1791 33 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 119946181 Common - acetoin reductases Ping_2541 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 119944553 Common - dTDP-4-dehydrorhamnose reductase Ping_0790 151 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 119947278 Common - UDP-sugar diphosphatase Ping_3682 70 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119946074 Common - amidase, hydantoinase/carbamoylase family protein Ping_2423 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 119946841 Common - HflC protein Ping_3235 206 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 119946926 Nonpathogen - hypothetical protein Ping_3320 2 None None None 119946656 Common glgA glycogen synthase Ping_3035 134 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 119946191 Nonpathogen - hypothetical protein Ping_2551 2 None None None 119947303 Common - ABC transporter permease protein Ping_3709 180 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 119946454 Common - MscS Mechanosensitive ion channel Ping_2829 192 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119946545 Nonpathogen - hypothetical protein Ping_2924 1 None None None 119946528 Common - fused nitric oxide dioxygenase and dihydropteridine reductase Ping_2905 146 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 119944057 Common - oxidoreductase FAD/NAD(P)-binding domain protein Ping_0272 94 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 119946218 Nonpathogen - hypothetical protein Ping_2578 1 None None None 119947008 Common - aldo/keto reductase Ping_3405 179 COG4989 COG4989, Predicted oxidoreductase General function prediction only 119944073 Common - sigma 54 modulation protein/ribosomal protein S30EA Ping_0288 58 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 119944338 Common pntB pyridine nucleotide transhydrogenase Ping_0565 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 119946411 Common - transcriptional regulator of LacI family protein Ping_2785 128 COG1609 PurR, Transcriptional regulators Transcription 119945163 Common - transcriptional regulator for copper, periplasmic binding protein, LacI family protein Ping_1427 53 COG3420 NosD, Nitrous oxidase accessory protein Inorganic ion transport and metabolism 119944329 Common - hypothetical protein Ping_0556 11 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 119946138 Common - chaperonin Cpn60, GroEL, large subunit of GroESL Ping_2493 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 119945033 Common - glutathione synthetase Ping_1287 122 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 119945124 Common - transcriptional regulator of MerR family protein Ping_1385 135 COG0789 SoxR, Predicted transcriptional regulators Transcription 119947023 Common - single-strand binding protein/Primosomal replication protein n Ping_3420 23 COG2965 PriB, Primosomal replication protein N DNA replication, recombination, and repair 119945894 Common - phosphoribosylglycinamide formyltransferase 2 Ping_2234 207 COG0027 PurT, Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) Nucleotide transport and metabolism 119944485 Common - sensor protein for C4-dicarboxylate transport, sensor protein, ATPase domain Ping_0714 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 119944127 Common rbsC ribose ABC transporter permease protein Ping_0342 142 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 119945430 Nonpathogen - hypothetical protein Ping_1727 1 None None None 119944774 Common - Smr protein/MutS2 Ping_1016 79 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 124021676 Common - hypothetical protein DUF86 Ping_0759 4 COG2445 COG2445, Uncharacterized conserved protein Function unknown 119943901 Common - SOS-response transcriptional repressor, LexA Ping_0108 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 119943955 Common - tryptophanyl-tRNA synthetase Ping_0168 230 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119947292 Common - transcriptional regulator, GntR family protein Ping_3696 122 COG2188 PhnF, Transcriptional regulators Transcription 119947049 Common - DNA-directed RNA polymerase, beta subunit Ping_3446 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 119944345 Common - TRAP dicarboxylate transporter, DctM subunit Ping_0572 123 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 119944398 Common rpoH RNA polymerase sigma-32 factor RpoH Ping_0626 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 119945437 Common - MscS Mechanosensitive ion channel Ping_1734 115 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 119945957 Common - Na+-dependent transporter of the SNF family protein Ping_2297 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 119947058 Common - nucleotide sugar epimerase/dehydratase Ping_3456 141 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119946361 Common - diguanylate cyclase Ping_2732 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119945122 Common - hypothetical protein Ping_1383 15 None None None 119947249 Common - glycosyl transferase, family 9 Ping_3647 18 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 119945995 Common - DNA ligase (NAD(+)) Ping_2336 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 119945557 Common - NlpBDapX family lipoprotein Ping_1861 20 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 119945197 Common - ybaK/ebsC protein Ping_1461 103 COG2606 EbsC, Uncharacterized conserved protein Function unknown 119946023 Common - glyceraldehyde-3-phosphate dehydrogenase, type I Ping_2367 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 119945720 Common - Ferritin, Dps family protein Ping_2045 131 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 119946790 Common - AcrA-like protein Ping_3183 63 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 119943868 Common - hypothetical protein DUF494 Ping_0075 40 COG2922 Smg, Uncharacterized protein conserved in bacteria Function unknown 119947319 Common - glycyl-tRNA synthetase, beta subunit Ping_3726 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 119946935 Common - hybrid sensor and regulator fused Ping_3329 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119944976 Common - cytochrome B561 Ping_1227 48 COG3658 COG3658, Cytochrome b Energy production and conversion 119945535 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_1839 185 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119944005 Common - biotin--acetyl-CoA-carboxylase ligase Ping_0219 228 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 119945302 Common - hypothetical protein Ping_1585 9 None None None 119946233 Common - TRAP transporter solute receptor, TAXI family protein Ping_2594 81 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 119943887 Common - Hsp33 protein Ping_0094 139 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 119946507 Common - ABC-type transporter periplasmic protein Ping_2884 75 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 119944097 Common - GatB/Yqey domain protein Ping_0312 153 COG1610 COG1610, Uncharacterized conserved protein Function unknown 119946500 Common rplM 50S ribosomal protein L13 Ping_2877 238 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 119946799 Common - Ppx/GppA phosphatase Ping_3192 177 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 119946767 Common - ABC oligopeptide transporter extracellular solute-binding protein, family 5 Ping_3160 123 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 119944670 Common - Aminoacyl-tRNA hydrolase Ping_0909 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 119944840 Common - excinuclease ABC subunit B Ping_1082 229 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 119944133 Common - acetolactate synthase 2 catalytic subunit Ping_0348 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 119946597 Common - ribosomal protein S2 Ping_2976 232 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 119945186 Common - FAD linked oxidase domain protein Ping_1450 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 119944165 Common tbpA thiamin transporter substrate binding subunit Ping_0385 59 COG4143 TbpA, ABC-type thiamine transport system, periplasmic component Coenzyme metabolism 119946007 Nonpathogen - hypothetical protein Ping_2349 3 None None None 119944125 Common - ABC transporter protein for ribose or fucose Ping_0340 50 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 119945930 Common - exoribonuclease II Ping_2270 192 COG4776 Rnb, Exoribonuclease II Transcription 119945482 Nonpathogen - hypothetical protein Ping_1783 1 None None None 119945550 Common - hypothetical protein Ping_1854 3 None None None 119944520 Common - NADH:ubiquinone oxidoreductase, subunit D Ping_0749 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 119945712 Common - hypothetical transmembrane protein DUF6 Ping_2032 67 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 119947021 Common - 23S rRNA (guanosine-2'-O-)-methyltransferase Ping_3418 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 119946762 Nonpathogen - hypothetical protein Ping_3155 1 None None None 119946900 Common - aspartate carbamoyltransferase, catalytic subunit Ping_3294 239 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 119944449 Common rpoS RNA polymerase sigma-38 factor RpoS Ping_0677 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 119945229 Common - Sel1 domain and tetratricopeptide repeat-containing protein Ping_1495 110 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 119943921 Common - glucuronate isomerase Ping_0131 59 COG1904 UxaC, Glucuronate isomerase Carbohydrate transport and metabolism 119946413 Common - ABC transporter for sugar (aldose) ATP-binding protein Ping_2787 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 119947224 Common - pantothenate kinase Ping_3622 71 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 119946854 Common - hypothetical protein Ping_3248 3 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 119944224 Common - dolichyl-phosphate beta-D-mannosyltransferase Ping_0447 78 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 119944621 Common - agmatinase Ping_0860 153 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 119945983 Nonpathogen - hypothetical protein Ping_2323 3 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 119945806 Common - hypothetical protein Ping_2143 17 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 119946187 Common - transporter major facilitator superfamily MFS_1 Ping_2547 51 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944915 Common - dephospho-CoA kinase Ping_1159 198 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 119945859 Common - Triose-phosphate isomerase Ping_2199 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 119945921 Common - nucleotide-binding protein Ping_2261 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 119947252 Common - histidine triad (HIT) protein Ping_3650 39 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 119944327 Common - Glucan endo-1,3-beta-D-glucosidase Ping_0554 50 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 119944578 Common - NusA antitermination factor Ping_0816 216 COG0195 NusA, Transcription elongation factor Transcription 119943967 Common - phosphate transporter Ping_0180 176 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 119945222 Common - GAF domain-containing protein Ping_1488 79 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 119946488 Common - purine nucleoside phosphorylase Ping_2864 92 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 119943992 Common anmK anhydro-N-acetylmuramic acid kinase Ping_0206 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 119946882 Nonpathogen - hypothetical protein Ping_3276 1 COG5415 COG5415, Predicted integral membrane metal-binding protein General function prediction only 119944493 Common - cyd operon protein YbgT Ping_0722 11 COG4890 COG4890, Predicted outer membrane lipoprotein Function unknown 119944403 Common - transcriptional regulator, BadM/Rrf2 family protein Ping_0631 149 COG1959 COG1959, Predicted transcriptional regulator Transcription 119944677 Common grpE co-chaperone GrpE Ping_0916 223 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 119944295 Common - trehalose(maltose)-specific PTS system components IIBC Ping_0522 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 119945085 Nonpathogen - hypothetical protein Ping_1341 1 None None None 119946932 Common - Nucleoside-diphosphate kinase Ping_3326 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 119944602 Common - transporter major facilitator superfamily MFS_1 Ping_0840 73 None None None 119946915 Common - rRNA (guanine-N(1)-)-methyltransferase Ping_3309 63 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 119944592 Common - hypothetical protein Ping_0830 13 COG5595 COG5595, Zn-ribbon-containing, possibly nucleic-acid-binding protein General function prediction only 119945794 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_2130 164 COG0583 LysR, Transcriptional regulator Transcription 119946647 Common - nitrogen regulatory protein P-II Ping_3026 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 119945759 Common - Glycerophosphodiester phosphodiesterase Ping_2092 160 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 119946248 Common - ribosomal protein L36 Ping_2610 137 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 119945219 Common - Integrase, catalytic region Ping_1485 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 119947146 Common - TRAP dicarboxylate transporter, DctM subunit Ping_3544 121 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119943822 Common - Rhs element Vgr protein Ping_0028 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 119947218 Common - acetylornithine and succinylornithine aminotransferases Ping_3616 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 119944353 Common - 3-methyl-2-oxobutanoate hydroxymethyltransferase Ping_0580 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 119947299 Common - cold-shock DNA-binding domain protein Ping_3704 177 COG1278 CspC, Cold shock proteins Transcription 119945025 Nonpathogen - hypothetical protein Ping_1279 2 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119944986 Common - metal dependent phosphohydrolase Ping_1237 122 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 119945515 Common - putative ribonuclease BN Ping_1819 117 COG1295 Rbn, Predicted membrane protein Function unknown 119946531 Common - trehalose-6-phosphate hydrolase Ping_2908 159 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119947230 Common - glutaredoxin Ping_3628 20 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119946294 Common - hypothetical protein Ping_2661 21 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 119946641 Common - CcmE/CycJ protein Ping_3020 92 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 119945581 Common - hypothetical protein Ping_1886 10 None None None 119944256 Common - type IV-A pilus assembly ATPase PilB Ping_0480 220 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 119946630 Common - orotidine 5'-phosphate decarboxylase Ping_3009 173 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 119946907 Common - RNA methyltransferase, TrmH family, group 2 Ping_3301 160 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 119945348 Common - putative acyl carrier protein Ping_1634 15 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119946365 Common - hypothetical protein Ping_2737 12 None None None 119945135 Common - CRISPR-associated protein, Csy2 family protein Ping_1398 20 None None None 119945637 Common - hypothetical protein Ping_1949 5 None None None 119946390 Common - hypothetical protein Ping_2764 5 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 119946608 Common - ABC transporter inner-membrane translocator Ping_2987 152 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 119946957 Common - transcriptional regulator, substrate-binding, LysR family protein Ping_3351 184 COG0583 LysR, Transcriptional regulator Transcription 119944648 Common - Na+/H+ antiporter NhaC Ping_0887 29 COG2056 COG2056, Predicted permease General function prediction only 119944065 Common - OmpA/MotB domain protein Ping_0280 174 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 119946848 Common - hypothetical protein UPF0079 Ping_3242 203 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 119944514 Common - ATP-dependent Clp protease, ATP-binding subunit clpA Ping_0743 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 119945745 Common - glycine betaine/L-proline ABC transporter, ATPase subunit Ping_2075 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 119946204 Common - PKD domain containing protein Ping_2564 72 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 119943938 Common - HAD-superfamily hydrolase, subfamily IA, variant 3 Ping_0151 37 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 119944788 Common - urocanate hydratase Ping_1030 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 119944157 Common - tRNA (guanine-N(7)-)-methyltransferase Ping_0377 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 119945695 Common - phosphotransferase system PTS, EIIB protein Ping_2012 52 COG1264 PtsG, Phosphotransferase system IIB components Carbohydrate transport and metabolism 119945742 Common - choline dehydrogenase Ping_2072 92 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 119944020 Common - phage integrase family protein Ping_0234 106 COG0582 XerC, Integrase DNA replication, recombination, and repair 119946093 Common - succinyl-diaminopimelate desuccinylase Ping_2443 210 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 119943811 Common - hypothetical protein Ping_0017 16 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 119945311 Common - Resolvase, N-terminal domain Ping_1594 130 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 119946034 Common - phosphomethylpyrimidine kinase Ping_2378 218 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 119945053 Nonpathogen - hypothetical protein Ping_1308 2 None None None 119945914 Common sdhA succinate dehydrogenase flavoprotein subunit Ping_2254 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 119944706 Common - putative signal peptide protein Ping_0945 31 COG5572 COG5572, Predicted integral membrane protein Function unknown 119944852 Common - dTMP kinase Ping_1094 224 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 119945404 Nonpathogen - hypothetical protein Ping_1696 1 None None None 119945497 Common - hypothetical protein Ping_1801 8 COG3110 COG3110, Uncharacterized protein conserved in bacteria Function unknown 119947181 Common - OmpA/MotB domain protein Ping_3579 107 COG1360 MotB, Flagellar motor protein Cell motility and secretion 119945775 Common - NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 Ping_2110 25 None None None 119946618 Common - urease accessory protein UreG Ping_2997 133 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 119944273 Common - Lytic transglycosylase, catalytic Ping_0499 127 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 119947242 Common hemX uroporphyrin-III C-methyltransferase HemX Ping_3640 54 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 119946258 Common - hypothetical protein DUF52 Ping_2620 66 COG1355 COG1355, Predicted dioxygenase General function prediction only 119946995 Common - transporter major facilitator superfamily MFS_1 Ping_3390 75 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119946420 Common - 2-hydroxyacid dehydrogenase Ping_2794 230 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 119946327 Common - cold-shock DNA-binding domain protein Ping_2698 181 COG1278 CspC, Cold shock proteins Transcription 119944266 Common - PTS system, N-acetylglucosamine-specific IIBC subunit Ping_0491 50 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 119944583 Common - ABC transporter substrate binding inner membrane protein Ping_0821 59 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 119945781 Common - proline racemase Ping_2117 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 119946573 Common proA gamma-glutamyl phosphate reductase Ping_2952 188 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 119943974 Common - fused deadenylyltransferase and adenylyltransferase for glutamine synthetase Ping_0187 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 119945058 Common - GCN5-related N-acetyltransferase Ping_1314 61 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 119946715 Nonpathogen - hypothetical protein Ping_3099 2 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 119946952 Common - TonB family protein Ping_3346 7 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 119946496 Common - ubiquinol--cytochrome c reductase, cytochrome c1 Ping_2872 68 COG2857 CYT1, Cytochrome c1 Energy production and conversion 119946785 Common - serine/threonine protein phosphatase Ping_3178 30 None None None 119944653 Common - envelope stress induced periplasmic protein, Spy-related Ping_0892 5 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 119946106 Common - hypothetical protein Ping_2456 34 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 119946320 Common - peptidase Ping_2690 121 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 119946544 Common - hypothetical protein Ping_2923 14 None None None 119944039 Common - proline iminopeptidase Ping_0253 111 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119946276 Common - phage Tail Collar domain protein Ping_2640 30 COG4675 MdpB, Microcystin-dependent protein Function unknown 119945651 Nonpathogen - hypothetical protein Ping_1964 2 None None None 119945566 Common - hypothetical protein DUF112 Ping_1871 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 119944796 Common - regulatory proteins, MerR family protein Ping_1038 12 None None None 119944429 Common - 3-hydroxybutyryl-CoA dehydrogenase Ping_0657 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 119945863 Common - lipoprotein releasing system, transmembrane protein, LolC/E family protein Ping_2203 156 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 119944204 Nonpathogen - hypothetical protein Ping_0425 2 None None None 119946435 Common - phosphohistidine phosphatase, SixA Ping_2810 47 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 119946428 Common - two component transcriptional regulator, winged helix family protein Ping_2802 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119944922 Common - hypothetical protein Ping_1167 30 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 119946706 Common - transcriptional regulator of TetR family protein Ping_3088 109 COG1309 AcrR, Transcriptional regulator Transcription 119945174 Common - Glycine hydroxymethyltransferase Ping_1438 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 119945414 Common - Methyltransferase type 11 Ping_1708 76 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 119946340 Common - cytochrome oxidase assembly Ping_2711 36 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 119945840 Nonpathogen - predicted primosomal replication protein N'' Ping_2180 1 None None None 119945492 Common - glycosyl transferase, group 1 Ping_1794 59 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 119946376 Common garR 2-hydroxy-3-oxopropionate reductase GarR Ping_2750 193 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 119944393 Common - hypothetical protein DUF1145 Ping_0621 16 COG3776 COG3776, Predicted membrane protein Function unknown 119944325 Common - transcriptional regulator for galactose, periplasmic binding protein, LacI family protein Ping_0552 129 COG1609 PurR, Transcriptional regulators Transcription 119947038 Common - sulfite reductase (NADPH) hemoprotein, beta-component Ping_3435 136 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 119944278 Common - sodium:dicarboxylate symporter Ping_0504 154 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 119943880 Common - transcriptional regulator, sugar-binding domain of SorC family protein Ping_0087 60 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 119945546 Nonpathogen - hypothetical protein Ping_1850 1 None None None 119946924 Common - phosphoribosylformylglycinamidine synthase Ping_3318 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 119947188 Common - flagellar hook-associated 2 domain protein Ping_3586 72 COG1345 FliD, Flagellar capping protein Cell motility and secretion 119946260 Common - Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG protein Ping_2622 79 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 119944042 Common - Naringenin-chalcone synthase Ping_0256 38 COG3424 BcsA, Predicted naringenin-chalcone synthase Secondary metabolites biosynthesis, transport, and catabolism 119944692 Common - fumarate/nitrate reduction transcriptional regulator Ping_0931 151 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 119945294 Nonpathogen - hypothetical protein Ping_1576 4 None None None 119946396 Common - ABC transporter ATP-binding protein Ping_2770 249 COG4136 COG4136, ABC-type uncharacterized transport system, ATPase component General function prediction only 119944049 Common - Na+/solute symporter Ping_0263 164 COG4147 DhlC, Predicted symporter General function prediction only 119945765 Common - aspartate racemase Ping_2098 84 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 119945530 Common - isoquinoline 1-oxidoreductase maturation factor Ping_1834 94 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 119943834 Common - diaminopimelate decarboxylase Ping_0041 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 119946467 Nonpathogen - hypothetical protein Ping_2842 1 None None None 119946338 Common - MATE efflux family protein Ping_2709 129 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 119944418 Common - TRAP dicarboxylate transporter, DctM subunit Ping_0646 134 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119944890 Common - rod shape-determining protein RodA Ping_1134 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 119944908 Common ftsZ cell division GTP-binding tubulin-like protein FtsZ Ping_1152 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 119946220 Common - Deoxyribonuclease I Ping_2580 28 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 119944650 Common - DTW domain containing protein Ping_0889 39 COG3148 COG3148, Uncharacterized conserved protein Function unknown 119946689 Common - hypothetical protein DUF167 Ping_3071 31 COG1872 COG1872, Uncharacterized conserved protein Function unknown 119946724 Common - Transposon Tn7 transposition protein B Ping_3108 34 None None None 119946773 Common - glycerol uptake facilitator protein Ping_3166 46 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 119946069 Common - ABC transporter extracellular solute-binding protein, family 5 Ping_2418 193 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 119945815 Common - kinase Ping_2153 11 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 119946344 Common - cytochrome C oxidase assembly protein Ping_2715 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 119945142 Common - 5,6-dimethylbenzimidazole phosphoribosyltransferase Ping_1406 145 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 119944196 Common - Endoribonuclease L-PSP Ping_0416 170 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 119945040 Nonpathogen - putative orphan protein Ping_1294 2 None None None 119944543 Common - dNTP-hexose dehydratase/epimerase Ping_0777 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 119944962 Common - hydrogenase assembly chaperone hypC/hupF Ping_1211 57 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 119946180 Common - ornithine cyclodeaminase Ping_2540 101 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 119945343 Common - uracil phosphoribosyltransferase Ping_1628 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 119945047 Common - peptidase U32 Ping_1301 138 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 119946987 Common - possible competence-damaged protein CinA domain Ping_3382 193 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 119945339 Common - methionyl-tRNA synthetase Ping_1623 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119944363 Common - glutathione-dependent formaldehyde-activating, GFA Ping_0590 48 COG3791 COG3791, Uncharacterized conserved protein Function unknown 119947165 Common - flagellar assembly protein FliH Ping_3563 32 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 119944055 Common - hypothetical protein Ping_0270 13 COG5591 COG5591, Uncharacterized conserved protein Function unknown 119945078 Common - patatin-like protein of phospholipase family protein Ping_1334 118 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 119945159 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_1423 161 COG0583 LysR, Transcriptional regulator Transcription 119944183 Nonpathogen - hypothetical protein Ping_0403 2 None None None 119945152 Common - Ornithine decarboxylase Ping_1416 213 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 119945459 Common - efflux transporter, RND family, MFP subunit Ping_1757 71 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 119946897 Common - Cof-like hydrolase Ping_3291 112 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 119946873 Common - nitrogen regulatory protein P-II Ping_3267 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 119944105 Common - twin-arginine translocation protein, TatA/E family subunit Ping_0320 5 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 119944463 Common - ABC transporter ATP-binding protein Ping_0691 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 119945943 Common - putative RNA methylase Ping_2283 158 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 119947153 Common - fructose-specific PTS IIA/HPr components Ping_3551 116 COG4668 MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain Carbohydrate transport and metabolism 119944571 Common - hypothetical protein UPF0044 Ping_0809 97 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 119943961 Common - putative undecaprenol kinase Ping_0174 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 119947175 Common - flagellar basal-body rod protein FlgG Ping_3573 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 119946813 Common - Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Ping_3207 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 119946620 Common - hypothetical protein Ping_2999 4 None None None 119946707 Common - diguanylate cyclase/phosphodiesterase Ping_3089 170 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119945318 Common smpB SsrA-binding protein Ping_1602 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 119944555 Common - glycosyl transferase, group 1 Ping_0792 67 None None None 119944960 Common - formyl transferase domain protein Ping_1209 25 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 119947020 Common - ribonuclease R Ping_3417 200 COG0557 VacB, Exoribonuclease R Transcription 119944152 Common - fructose-bisphosphate aldolase Ping_0372 175 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 119943965 Common - General secretion pathway protein B Ping_0178 8 None None None 119944717 Common - adenylate kinases Ping_0957 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 119946971 Common - 16S rRNA processing protein RimM Ping_3366 183 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 119944323 Common - hypothetical protein Ping_0550 4 None None None 119945188 Common - RNA binding S1 domain protein Ping_1452 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 119944124 Common - transketolase Ping_0339 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 119944865 Common - ferredoxin Ping_1108 49 COG0633 Fdx, Ferredoxin Energy production and conversion 119945632 Common - transcriptional regulator of MerR family protein Ping_1943 139 COG0789 SoxR, Predicted transcriptional regulators Transcription 119946588 Common - outer membrane chaperone Skp (OmpH) Ping_2967 67 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 119946247 Common - hypothetical protein Ping_2609 6 None None None 119945065 Common - Inositol-phosphate phosphatase Ping_1321 212 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 119944565 Common - RNP-1 like RNA-binding protein Ping_0802 65 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 119945454 Nonpathogen - hypothetical protein Ping_1751 1 None None None 119945431 Common - outer membrane efflux family protein Ping_1728 38 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 119945068 Common - cysteine desulfurase IscS Ping_1324 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 119945835 Common napD nitrate reductase accessory periplasmic protein NapD Ping_2175 20 COG3062 NapD, Uncharacterized protein involved in formation of periplasmic nitrate reductase Inorganic ion transport and metabolism 119946240 Common - mannosyl-3-phosphoglycerate phosphatase Ping_2602 31 COG3769 COG3769, Predicted hydrolase (HAD superfamily) General function prediction only 119943920 Common - 2-dehydro-3-deoxygluconokinase Ping_0130 164 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 119947305 Common - efflux transporter, RND family, MFP subunit Ping_3711 162 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 119946080 Common - ABC transporter for histidine/lysine/arginine/ornithine ATP-binding protein Ping_2429 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 119945672 Common - fused respiratory FAD-dependent NADH dehydrogenase and cupric reductase Ping_1985 202 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 119945244 Nonpathogen - hypothetical protein Ping_1513 1 None None None 119944510 Nonpathogen - hypothetical protein Ping_0739 1 None None None 119945487 Common - hypothetical protein Ping_1788 24 None None None 119943871 Common - peptide deformylase Ping_0078 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 119944395 Common - signal recognition particle-docking protein FtsY Ping_0623 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 119945892 Common - two component transcriptional regulator, winged helix family protein Ping_2232 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119945735 Common - glutaredoxin Ping_2064 20 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 119947043 Common rpsL 30S ribosomal protein S12 Ping_3440 240 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 119945329 Common - methyltransferase Ping_1613 46 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 119944627 Common - chloride channel protein Ping_0866 158 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 119946188 Nonpathogen - hypothetical protein Ping_2548 1 None None None 119946265 Common - hypothetical protein Ping_2628 87 COG1738 COG1738, Uncharacterized conserved protein Function unknown 119947000 Common - Alternative oxidase Ping_3395 11 None None None 119944484 Common - response regulator receiver protein Ping_0713 2 None None None 119944647 Common - Auxin Efflux Carrier Ping_0886 121 COG0679 COG0679, Predicted permeases General function prediction only 119944636 Common - LexA regulated protein Ping_0875 21 None None None 119946590 Common - putative membrane-associated zinc metalloprotease Ping_2969 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 119944245 Common - ATP synthase F0, H+-transporting two-sector ATPase B/B' subunit Ping_0469 49 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 119947197 Common - flagellar biosynthetic protein FliR Ping_3595 87 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 119946456 Common - ABC polar amino acid transporter inner membrane protein Ping_2831 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 119945783 Common - isochorismatase hydrolase Ping_2119 64 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 119946012 Common - uncharacterized conserved coiled coil protein Ping_2355 20 None None None 119945595 Common - metal dependent phosphohydrolase Ping_1901 113 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 119945706 Common - peptidase M24 Ping_2026 246 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 119945293 Common - AFG1-family ATPase Ping_1575 98 COG1485 COG1485, Predicted ATPase General function prediction only 119946215 Common - stress protein, tellurium resistance protein Ping_2575 31 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119945009 Nonpathogen - Gas vesicle protein K Ping_1261 3 None None None 119946803 Common - ABC transporter ATP-binding protein Ping_3197 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 119947053 Common - ribosomal protein L11 Ping_3450 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 119944944 Common - leucyl-tRNA synthetase Ping_1191 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 161986628 Common - riboflavin synthase subunit alpha Ping_3144 208 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 119944016 Common - ornithine carbamoyltransferase Ping_0230 239 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 119944880 Common - Rod shape-determining protein MreD Ping_1124 49 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 119945950 Common - carboxynorspermidine decarboxylase Ping_2290 52 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 119945038 Common - SEC-C motif domain protein Ping_1292 34 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 119945606 Common - surface antigen (D15) Ping_1915 121 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 119944035 Common - Phosphoglycerate mutase Ping_0249 11 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 119945570 Nonpathogen - predicted primosomal replication protein N'' Ping_1875 1 None None None 119945884 Common yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF Ping_2224 207 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 119944503 Common - endonuclease III Ping_0732 238 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 119945846 Common - UDP-2,3-diacylglucosamine hydrolase Ping_2186 83 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 119946828 Common - uroporphyrinogen decarboxylase Ping_3222 182 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 119945206 Common - elongation factor P Ping_1470 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 119946927 Nonpathogen - hypothetical protein Ping_3321 1 None None None 119946702 Common - hypothetical protein Ping_3084 26 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 119944352 Common - pantoate--beta-alanine ligase Ping_0579 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 119944519 Common - Na(+)-translocating NADH-quinone reductase subunit C Ping_0748 46 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 119947227 Common - Na+/Ca+ antiporter, CaCA family protein Ping_3625 122 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 119944756 Common - Deoxyribodipyrimidine photo-lyase Ping_0998 140 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 119946887 Common - fumarate reductase, D subunit Ping_3281 23 COG3080 FrdD, Fumarate reductase subunit D Energy production and conversion 119945463 Nonpathogen - hypothetical protein Ping_1761 3 None None None 119946748 Common - hypothetical protein Ping_3139 3 None None None 119945100 Common - putative monovalent cation/H+ antiporter subunit C Ping_1358 95 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 119947190 Common - flagellin domain protein Ping_3588 121 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 119944076 Common - ABC transporter binding protein inner membrane protein Ping_0291 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 119944365 Common - hypothetical protein Ping_0592 12 None None None 119945090 Common - hypothetical protein Ping_1347 11 None None None 119943844 Common - adenosylmethionine-8-amino-7-oxononanoate aminotransferase Ping_0051 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 119945774 Common - oxidoreductase, short-chain dehydrogenase/reductase family protein Ping_2109 60 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 119945418 Common - diacylglycerol kinase Ping_1713 106 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 119947068 Common - NusG antitermination factor Ping_3466 92 COG0250 NusG, Transcription antiterminator Transcription 119945523 Common - putative manganese-dependent inorganic pyrophosphatase Ping_1827 55 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 119945386 Common - hypothetical protein Ping_1675 11 None None None 119946351 Common - 4'-phosphopantetheinyl transferase Ping_2722 62 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 119947095 Common - Phospholipase A(1) Ping_3493 52 COG2829 PldA, Outer membrane phospholipase A Cell envelope biogenesis, outer membrane 119946075 Common - Serine--pyruvate transaminase Ping_2424 151 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 119946636 Common - VacJ family lipoprotein Ping_3015 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 119946271 Common - Pirin domain-containing protein Ping_2634 146 COG1741 COG1741, Pirin-related protein General function prediction only 119944993 Common - oxidoreductase domain protein Ping_1244 171 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 119944213 Common - eight transmembrane protein EpsH Ping_0434 19 None None None 119946437 Common - MoxR-like ATPase Ping_2812 191 COG0714 COG0714, MoxR-like ATPases General function prediction only 119946440 Common - von Willebrand factor, type A Ping_2815 73 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 119947267 Nonpathogen - hypothetical protein Ping_3665 1 None None None 119946385 Common - transcriptional regulator of LysR family protein Ping_2759 181 COG0583 LysR, Transcriptional regulator Transcription 119946288 Nonpathogen - lipopolysaccharide biosynthesis Ping_2655 1 None None None 119946579 Common - ABC transporter ATP-binding protein Ping_2958 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 119946164 Common - Methyltransferase type 12 Ping_2524 39 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 119946085 Common - HAD-superfamily subfamily IIA hydrolase like protein Ping_2434 50 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 119947002 Common - DTW domain containing protein Ping_3397 30 COG3148 COG3148, Uncharacterized conserved protein Function unknown 119944014 Common argC N-acetyl-gamma-glutamyl-phosphate reductase Ping_0228 216 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 119946120 Nonpathogen - GDSL-lilke lipase/acylhydrolase family protein Ping_2470 4 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 119945176 Common - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase Ping_1440 224 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 119947102 Common - ribosomal protein S4 Ping_3500 219 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 119945641 Common - cold-shock DNA-binding domain protein Ping_1953 179 COG1278 CspC, Cold shock proteins Transcription 119945982 Common - RimK domain protein ATP-grasp Ping_2322 59 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 119946741 Common - transposase IS116/IS110/IS902 family protein Ping_3127 62 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944798 Common clpB-1 chaperone endopeptidase Clp ATP-binding chain B,ClpB Ping_1040 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 119945260 Common - pseudouridine synthase Ping_1531 214 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 119947182 Common - MotA/TolQ/ExbB proton channel Ping_3580 99 COG1291 MotA, Flagellar motor component Cell motility and secretion 119944958 Common - hydrogenase formation HypD protein Ping_1207 109 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 119944885 Common - peptidase U62, modulator of DNA gyrase Ping_1129 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 119945002 Common - hypothetical protein Ping_1254 3 None None None 119944660 Common - DNA internalization-related competence protein ComEC/Rec2 Ping_0899 125 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 119946010 Common - hypothetical protein Ping_2352 24 None None None 119945054 Common - diheme-containing SoxA-like protein Ping_1309 35 COG3258 COG3258, Cytochrome c Energy production and conversion 119945365 Common - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Ping_1653 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 119945588 Nonpathogen - hypothetical protein Ping_1893 1 None None None 119945680 Common - fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme Ping_1996 81 COG4121 COG4121, Uncharacterized conserved protein Function unknown 119946278 Nonpathogen - hypothetical protein Ping_2642 1 None None None 119945805 Common - catalase/peroxidase HPI Ping_2142 98 COG0376 KatG, Catalase (peroxidase I) Inorganic ion transport and metabolism 119943879 Common - transaldolase B Ping_0086 180 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 119947064 Common - dTDP-4-dehydrorhamnose 3,5-epimerase Ping_3462 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 119943927 Nonpathogen - hypothetical protein Ping_0137 1 None None None 119945507 Common - S-adenosylmethionine-dependent methyltransferase Ping_1811 11 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 119947145 Common - putative transcriptional regulator Ping_3543 24 COG5631 COG5631, Predicted transcription regulator, contains HTH domain (MarR family) Transcription 119946511 Common - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein Ping_2888 103 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 119945353 Common - transposase IS3/IS911 family protein Ping_1641 67 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 119945970 Nonpathogen - Peptidoglycan-binding domain 1 protein Ping_2310 4 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 119944858 Common - Radical SAM domain protein Ping_1100 165 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 119944068 Common - hypothetical protein Ping_0283 2 COG3212 COG3212, Predicted membrane protein Function unknown 119944166 Common thiP thiamin transporter membrane protein Ping_0386 72 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 119946195 Common - hypothetical protein Ping_2555 40 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 119946754 Common - hypothetical protein Ping_3147 8 None None None 119946172 Nonpathogen - hypothetical protein Ping_2532 4 None None None 119943855 Common - glycine cleavage T protein (aminomethyl transferase) Ping_0062 119 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 119944872 Common - phosphoserine aminotransferase Ping_1115 110 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 119946486 Common - deoxyribose-phosphate aldolase Ping_2862 135 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 119944067 Common - two component transcriptional regulator, winged helix family protein Ping_0282 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119945694 Common - ABC transporter ATP-binding protein Ping_2011 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119945397 Common pfaC polyunsaturated fatty acid synthase PfaC Ping_1686 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 119947017 Common - hypothetical protein Ping_3414 8 None None None 119943800 Common argS arginyl-tRNA synthetase Ping_0006 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119947276 Common - hypothetical protein DUF81 Ping_3677 136 COG0730 COG0730, Predicted permeases General function prediction only 119945627 Nonpathogen - hypothetical protein Ping_1938 1 None None None 119946483 Common rpmE 50S ribosomal protein L31 Ping_2858 198 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 119945273 Common - DNA photolyase, FAD- binding- domain protein Ping_1548 131 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 119946837 Common - putative DNA polymerase III, psi subunit Ping_3231 9 COG3050 HolD, DNA polymerase III, psi subunit DNA replication, recombination, and repair 119946666 Common - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family protein Ping_3045 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 119947125 Common rplD 50S ribosomal protein L4 Ping_3523 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 119946962 Common - hypothetical protein UPF0227 Ping_3357 47 COG3150 COG3150, Predicted esterase General function prediction only 119944749 Common - Calcium-binding EF-hand-containing protein Ping_0991 8 None None None 119945111 Common - hypothetical protein Ping_1371 11 None None None 119944089 Common - isocitrate lyase Ping_0304 114 COG2224 AceA, Isocitrate lyase Energy production and conversion 119946523 Common - peptidase M48, Ste24p Ping_2900 189 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 119946653 Common - rRNA (guanine-N(2)-)-methyltransferase Ping_3032 113 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 119944343 Common - TRAP dicarboxylate transporter- DctP subunit Ping_0570 111 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119945118 Common - thiol:disulfide interchange protein DsbA Ping_1379 64 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 119944725 Common - putative sulfate transporter YchM Ping_0965 160 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 119946380 Common - glucose-6-phosphate 1-dehydrogenase Ping_2754 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 119943850 Common - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Ping_0057 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 119946305 Common - hypothetical protein DUF1348 Ping_2673 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 119944239 Common - F0F1 ATP synthase subunit beta Ping_0463 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 119946225 Common - beta-lactamase domain protein Ping_2586 125 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 119945287 Common - amidohydrolase-like protein Ping_1565 106 COG0388 COG0388, Predicted amidohydrolase General function prediction only 119947027 Common - exopolyphosphatase-related protein Ping_3424 12 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 119945688 Common - stress protein, tellurium resistance protein TerD Ping_2005 25 COG4110 COG4110, Uncharacterized protein involved in stress response General function prediction only 119947268 Common - transcriptional regulator of GntR domain Ping_3667 143 COG1802 GntR, Transcriptional regulators Transcription 119946823 Common - hypothetical protein DUF416 Ping_3217 26 COG3068 COG3068, Uncharacterized protein conserved in bacteria Function unknown 119945612 Common - dethiobiotin synthase Ping_1921 133 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 119946784 Common glpQ glycerophosphodiester phosphodiesterase Ping_3177 106 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 119945441 Common fumC fumarate hydratase Ping_1738 237 COG0114 FumC, Fumarase Energy production and conversion 119947294 Nonpathogen - hypothetical protein Ping_3698 1 None None None 119945602 Nonpathogen - hypothetical protein Ping_1908 1 None None None 119945242 Common - putative transposase Ping_1511 32 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944182 Nonpathogen - hypothetical protein Ping_0402 3 None None None 119946734 Nonpathogen - type IV pilin Ping_3118 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 119946006 Common - glycogen/starch synthases, ADP-glucose type Ping_2348 140 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 119944155 Common - hypothetical protein Ping_0375 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 119947114 Common rplE 50S ribosomal protein L5 Ping_3512 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 119945074 Common - hypothetical protein DUF528 Ping_1330 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 119945536 Common - MCP methyltransferase, CheR-type Ping_1840 155 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 119944811 Common - YCII-related Ping_1053 68 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 119947103 Common - 30S ribosomal protein S11 Ping_3501 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 119943949 Common - type IV pilus secretin PilQ Ping_0162 141 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 119945018 Common - hypothetical protein Ping_1270 24 None None None 119946228 Common pstC ABC phosphate transporter inner membrane protein PstC Ping_2589 233 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 119943912 Common nudE ADP-ribose diphosphatase NudE Ping_0119 133 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119944199 Common - transcriptional regulators, LysR family protein Ping_0419 19 None None None 119944373 Common - D-3-phosphoglycerate dehydrogenase Ping_0600 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 119947159 Common - hypothetical protein Ping_3557 6 None None None 119944453 Common rtxA structural toxin protein RtxA Ping_0681 53 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 119943918 Common - hypothetical protein Ping_0128 10 None None None 119944740 Nonpathogen - hypothetical protein Ping_0981 1 None None None 119944669 Common - GTP-binding protein YchF Ping_0908 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 119944412 Common - Ribonuclease III Ping_0640 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 119947011 Common - Alkaline phosphatase Ping_3408 83 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 119944476 Common - DNA methylase N-4/N-6 domain protein Ping_0705 120 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 119944190 Common - peptidase domain protein Ping_0410 6 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 119944234 Common - glycosyl transferase, group 1 Ping_0457 181 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 119946418 Common - hypothetical protein Ping_2792 6 None None None 119944801 Common - Glutathione S-transferase, N-terminal domain Ping_1043 26 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 119944082 Common - malate dehydrogenase Ping_0297 192 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 119944458 Common - peptidase M50 Ping_0686 18 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 119944109 Common - Glucose-6-phosphate isomerase Ping_0324 190 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 119946049 Common - gamma-glutamyltransferase Ping_2396 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 119944765 Common - Glutamate synthase (ferredoxin) Ping_1007 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 119946407 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Ping_2781 25 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 119943894 Common - general secretion pathway protein H Ping_0101 13 None None None 119944805 Common - dimethyladenosine transferase Ping_1047 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 119946146 Common galM aldose 1-epimerase Ping_2506 94 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 119945029 Common - uracil-DNA glycosylase Ping_1283 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 119944924 Common - histidyl-tRNA synthetase Ping_1169 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119944662 Common - tetraacyldisaccharide 4'-kinase Ping_0901 127 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 119944730 Common - aminoimidazole riboside kinase Ping_0971 177 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 119946699 Nonpathogen - hypothetical protein Ping_3081 6 None None None 119944096 Common - DNA primase Ping_0311 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 119944383 Common - short-chain alcohol dehydrogenase Ping_0610 25 COG3007 COG3007, Uncharacterized paraquat-inducible protein B Function unknown 119943969 Common - adenylate cyclase Ping_0182 55 COG3025 COG3025, Uncharacterized conserved protein Function unknown 119945723 Common - Phosphoribosylaminoimidazole carboxylase Ping_2049 186 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 119946313 Common - fructose-1,6-bisphosphate aldolase Ping_2682 30 COG3588 COG3588, Fructose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 119947259 Common - Acetyl-CoA carboxylase beta subunit-like protein Ping_3657 91 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 119946132 Common - hypothetical protein Ping_2484 9 None None None 119946643 Common - heme exporter protein CcmC Ping_3022 118 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 119943960 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Ping_0173 38 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 119944984 Common - bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase Ping_1235 55 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 119945342 Common - Rh family protein/ammonium transporter Ping_1627 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 119943824 Common - pentapeptide repeat protein Ping_0030 95 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 119946024 Common - transglutaminase domain protein Ping_2368 80 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 119946002 Common - aminopeptidase N Ping_2344 160 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 119945567 Common - putative tricarboxylic transport TctB Ping_1872 11 None None None 119945076 Common - ROK family protein Ping_1332 143 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 119944492 Common - cytochrome d ubiquinol oxidase, subunit II Ping_0721 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 119947164 Common - ATPase, FliI/YscN family protein Ping_3562 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 119944027 Common - transposase IS116/IS110/IS902 family protein Ping_0241 73 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946878 Common - bifunctional riboflavin kinase and FMN adenylyltransferase Ping_3272 211 COG0196 RibF, FAD synthase Coenzyme metabolism 119944111 Common - glycosyltransferase sugar-binding region containing DXD motif Ping_0326 9 COG3774 OCH1, Mannosyltransferase OCH1 and related enzymes Cell envelope biogenesis, outer membrane 119945639 Common - hypothetical protein Ping_1951 51 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 119944918 Common - translation initiation factor SUI1 Ping_1163 46 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 119944003 Common - methionine-R-sulfoxide reductase Ping_0217 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 119947186 Nonpathogen - hypothetical protein Ping_3584 1 None None None 119946255 Common - citrate synthase I Ping_2617 192 COG0372 GltA, Citrate synthase Energy production and conversion 119944416 Common - cysteine desulfurases, SufS subfamily protein Ping_0644 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 119944432 Common - phenylacetate-CoA ligase Ping_0660 122 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 119947090 Common - nitrogen metabolism transcriptional regulator, NtrC, Fis Family Ping_3488 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119946650 Common - lipoate-protein ligase B Ping_3029 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 119947332 Common - Cobyrinic acid a,c-diamide synthase Ping_3739 226 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 119946447 Common - ABC amino acid transporter extracellular solute-binding protein, family 3 Ping_2822 112 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119945949 Common - Saccharopine dehydrogenase Ping_2289 54 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 119944495 Common - MotA/TolQ/ExbB proton channel Ping_0724 152 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 119945236 Common - SUF system FeS assembly protein, NifU family protein Ping_1504 167 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 119947134 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Ping_3532 47 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 119945312 Common - hypothetical protein Ping_1595 15 None None None 119945384 Common - peptidase C1A, papain Ping_1673 17 COG4870 COG4870, Cysteine protease Posttranslational modification, protein turnover, chaperones 119945819 Common - cold-shock DNA-binding domain protein Ping_2158 178 COG1278 CspC, Cold shock proteins Transcription 119944236 Nonpathogen - hypothetical protein Ping_0459 5 None None None 119945908 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Ping_2248 23 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 119946976 Common - S-ribosylhomocysteinase Ping_3371 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 119946648 Common - Serine-type D-Ala-D-Ala carboxypeptidase Ping_3027 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 119945161 Common - ABC-2 type transporter for copper permease protein Ping_1425 60 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 119945049 Common - SMC domain protein Ping_1303 159 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 119947088 Common - hypothetical protein Ping_3486 14 None None None 119946662 Common - pyrroline-5-carboxylate reductase Ping_3041 212 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 119946955 Common - alcohol dehydrogenase, iron-containing Ping_3349 166 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 119944292 Common ribA GTP cyclohydrolase II Ping_0518 177 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 119946659 Common pilU type II secretion system protein (twitching motility protein) (PilU) Ping_3038 193 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 119945619 Common - Dimethylmenaquinone methyltransferase Ping_1928 103 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 119945533 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ping_1837 147 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 119944695 Common - heavy metal translocating P-type ATPase Ping_0934 231 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 119944405 Common - Oligopeptidase B Ping_0633 101 COG1770 PtrB, Protease II Amino acid transport and metabolism 119944664 Common - 3-deoxy-D-manno-octulosonate cytidylyltransferase Ping_0903 137 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 119945027 Common - autonomous glycyl radical cofactor GrcA Ping_1281 50 COG3445 COG3445, Acid-induced glycyl radical enzyme General function prediction only 119946779 Common - ABC sugar (glycerol) transporter binding protein inner membrane protein Ping_3172 137 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 119946871 Common - pseudouridine synthase, RluA family protein Ping_3265 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 119943882 Common - mannitol-1-phosphate 5-dehydrogenase Ping_0089 87 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 119943889 Common - general secretion pathway protein C Ping_0096 29 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 119944831 Common - arsenate reductase Ping_1073 105 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 119944099 Common gcp O-sialoglycoprotein endopeptidase Gcp Ping_0314 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 119946892 Common - lipoprotein, putative Ping_3286 10 None None None 119945878 Common - translation initiation factor IF-3 Ping_2218 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 119944179 Common - phage integrase family protein Ping_0399 189 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119947196 Common - flagellar biosynthetic protein FliQ Ping_3594 69 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 119945390 Common - Mammalian cell entry related domain protein Ping_1679 71 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 119945941 Common - ABC transporter ATP-binding protein Ping_2281 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 119946859 Common - PilD-dependent protein Ping_3253 3 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 119946818 Common - peptidase M23B Ping_3212 183 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 119944699 Common - cytochrome c oxidase, cbb3-type, subunit II Ping_0938 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 119945767 Common - hypothetical protein Ping_2100 6 None None None 119946036 Common - conserved hypothetical transcriptional regulator Ping_2380 4 None None None 119946122 Nonpathogen - hypothetical protein Ping_2474 1 None None None 119943984 Common - potassium uptake protein, TrkH family protein Ping_0197 161 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 119946811 Common nadE NAD synthetase Ping_3205 166 COG0171 NadE, NAD synthase Coenzyme metabolism 119946321 Common - hypothetical protein Ping_2691 3 COG3972 COG3972, Superfamily I DNA and RNA helicases General function prediction only 119946721 Common - Transposon Tn7 transposition protein D Ping_3105 14 None None None 119945406 Common - fused adenylate cyclase and hybrid sensor diguanylate cyclase and response regulator Ping_1699 183 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119945020 Common - Tellurite resistance TerB Ping_1272 16 COG3793 TerB, Tellurite resistance protein Inorganic ion transport and metabolism 119945653 Common - Colicin V production protein Ping_1966 68 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 119946796 Common rho transcription termination factor Rho Ping_3189 203 COG1158 Rho, Transcription termination factor Transcription 119944272 Common - Hydroxyacylglutathione hydrolase Ping_0498 204 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 119947335 Common - flavodoxin/nitric oxide synthase Ping_3742 71 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 119946485 Common - nucleoside transporter Ping_2861 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 119947033 Common - acetolactate synthase, large subunit, biosynthetic type Ping_3430 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 119945714 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Ping_2034 40 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119943814 Common - hypothetical protein Ping_0020 2 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 119947257 Common - phosphoribosyl-dephospho-CoA transferase Ping_3655 13 None None None 119944863 Common kefC glutathione-regulated potassium-efflux system protein KefC Ping_1105 145 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 119945625 Common - hypothetical protein Ping_1935 5 None None None 119946860 Common - pilin, putative Ping_3254 3 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 119946198 Nonpathogen - hypothetical protein Ping_2558 1 None None None 119944185 Common - phage integrase family protein Ping_0405 60 COG0582 XerC, Integrase DNA replication, recombination, and repair 119944655 Common - aminoacyl-histidine dipeptidase Ping_0894 60 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 119944672 Common - ribose-phosphate pyrophosphokinase Ping_0911 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 119945004 Nonpathogen - hypothetical protein Ping_1256 1 None None None 119945474 Common - NAD-dependent epimerase/dehydratase Ping_1772 64 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119944654 Common - glycogen debranching enzyme GlgX Ping_0893 165 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 119944044 Common - phospholipase Ping_0258 9 None None None 119946493 Common - primosomal protein N' Ping_2869 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 119945911 Common - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Ping_2251 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 119944142 Common - thiamine-phosphate pyrophosphorylase Ping_0361 225 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 119944782 Common - nitrite reductase (NAD(P)H), large subunit Ping_1024 192 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 119945056 Common - ABC transporter substrate-binding protein or LacI-type transcriptional regulator Ping_1312 16 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119946687 Nonpathogen - hypothetical protein Ping_3068 1 None None None 119946989 Nonpathogen - hypothetical protein Ping_3384 1 None None None 119945521 Common - sulfotransferase Ping_1825 16 None None None 119945491 Common - transcriptional regulator Ping_1793 34 COG3806 ChrR, Transcriptional activator Transcription 119945659 Common - predicted inner membrane peptidase Ping_1972 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 119946067 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_2416 187 COG0583 LysR, Transcriptional regulator Transcription 119944835 Common - septum site-determining protein MinC Ping_1077 103 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 119946422 Common - hypothetical protein Ping_2796 2 None None None 119946994 Common - DNA (exogenous) processing protein Ping_3389 86 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 119946333 Common - putative serine protein kinase, PrkA Ping_2704 70 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 119945630 Common - Ion transport protein Ping_1941 103 None None None 119944267 Common - glutaminyl-tRNA synthetase Ping_0492 212 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 119945428 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_1723 188 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119946472 Common - cadherin domain protein Ping_2847 69 None None None 119944688 Nonpathogen - hypothetical protein Ping_0927 1 None None None 119945192 Common - hypothetical protein Ping_1456 5 None None None 119945717 Common - polysaccharide biosynthesis protein Ping_2041 82 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 119946137 Common - hypothetical protein Ping_2491 5 None None None 119944974 Nonpathogen - hypothetical protein Ping_1224 2 None None None 119946169 Common - glycoside hydrolase, family 31 Ping_2529 83 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 119944590 Common - hypothetical protein Ping_0828 8 None None None 119946292 Common - Prolyl 4-hydroxylase, alpha subunit Ping_2659 10 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 119945700 Common - galactokinase Ping_2017 89 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 119945801 Common - regulatory protein for cyclic-di-GMP, EAL domain Ping_2138 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119946571 Common - inosine-5'-monophosphate dehydrogenase Ping_2950 241 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 119946368 Common - hypothetical protein Ping_2742 33 None None None 119944103 Common - Sec-independent protein translocase, TatC subunit Ping_0318 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 119945790 Common - BCCT transporter Ping_2126 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 119943982 Common - Rhodanese domain protein Ping_0195 112 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 119946625 Common - UTP-GlnB uridylyltransferase, GlnD Ping_3004 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 119944297 Common - octaprenyl-diphosphate synthase Ping_0524 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 119945123 Nonpathogen - hypothetical protein Ping_1384 5 None None None 119947048 Common - DNA-directed RNA polymerase, beta' subunit Ping_3445 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 119944288 Common - metallophosphoesterase Ping_0514 90 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 119945855 Common - ABC oligopeptide/dipeptide transporter ATP-binding protein Ping_2195 249 COG4170 SapD, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 119946917 Common - acetate kinase Ping_3311 162 COG0282 ackA, Acetate kinase Energy production and conversion 119946285 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Ping_2650 222 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 119946852 Common - hypothetical protein Ping_3246 14 None None None 119944584 Common - ABC transporter inner-membrane translocator Ping_0822 150 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 119943861 Common rseC sigma-E factor regulatory protein RseC Ping_0068 17 COG3086 RseC, Positive regulator of sigma E activity Signal transduction mechanisms 119944123 Common - hypothetical protein Ping_0338 12 None None None 119944312 Common dctQ-2 tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ Ping_0539 64 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 119945087 Common - putative transposase Ping_1344 32 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944876 Nonpathogen - periplasmic thioredoxin of cytochrome c-type biogenesis Ping_1119 1 None None None 119944901 Common - UDP-N-acetylmuramoylalanine--D-glutamate ligase Ping_1145 210 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 119946905 Common cysE serine acetyltransferase Ping_3299 189 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 119946014 Nonpathogen - hypothetical protein Ping_2358 1 None None None 119945130 Common - integron integrase Ping_1393 218 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119944088 Common - malate synthase G Ping_0303 61 COG2225 AceB, Malate synthase Energy production and conversion 119946903 Common - hypothetical protein DUF904 Ping_3297 21 COG3074 COG3074, Uncharacterized protein conserved in bacteria Function unknown 119945753 Common - alanine racemase Ping_2084 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 119947329 Common - F0F1 ATP synthase subunit A Ping_3736 205 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 119945337 Common - beta-lactamase Ping_1621 134 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 119946513 Common - OstA family protein Ping_2890 43 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 119944149 Common - O-antigen polymerase Ping_0368 11 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 119945137 Common - CRISPR-associated protein, Csy4 family protein Ping_1400 20 None None None 119944354 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Ping_0581 200 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 119946869 Common clpB-2 chaperone ClpB containing ATPase AAA-2 domain Ping_3263 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 119945330 Common - hypothetical protein DUF882 Ping_1614 63 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 119944169 Common - hypothetical protein UPF0270 Ping_0389 31 COG3089 COG3089, Uncharacterized protein conserved in bacteria Function unknown 119947211 Common - ribonuclease P protein component Ping_3609 76 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 119943903 Common - MATE efflux family protein Ping_0110 122 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 119946249 Common rpsM 30S ribosomal protein S13 Ping_2611 232 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 119945797 Common - Methyltransferase type 11 Ping_2134 26 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 119946242 Common - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Ping_2604 164 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 119946770 Nonpathogen - hypothetical protein Ping_3163 9 None None None 119945213 Common - molybdenum cofactor synthesis domain Ping_1477 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 119946941 Common - oligoribonuclease Ping_3335 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 119945510 Common - Ion transport 2 domain protein Ping_1814 73 None None None 119945936 Common - conserved hypothetical protein 103 Ping_2276 192 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 119945373 Common - fatty acid metabolism regulator Ping_1661 61 COG2186 FadR, Transcriptional regulators Transcription 119946104 Common - hypothetical protein Ping_2454 6 None None None 119944526 Common - cold-shock DNA-binding domain protein Ping_0755 180 COG1278 CspC, Cold shock proteins Transcription 119946501 Common - AFG1-family ATPase Ping_2878 101 COG1485 COG1485, Predicted ATPase General function prediction only 119947148 Common - TRAP dicarboxylate transporter- DctP subunit Ping_3546 68 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 119946155 Common - ATPase associated with various cellular activities Ping_2515 48 COG0714 COG0714, MoxR-like ATPases General function prediction only 119947234 Common - hypothetical protein DUF395, YeeE/YedE Ping_3632 70 COG2391 COG2391, Predicted transporter component General function prediction only 119945051 Common - diguanylate cyclase Ping_1306 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119945900 Common - deoxyxylulose-5-phosphate synthase Ping_2240 227 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 119946611 Common - ABC transporter ATP-binding protein Ping_2990 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 119944689 Common - permease Ping_0928 101 COG0628 PerM, Predicted permease General function prediction only 119944258 Common - regulatory protein for cyclic-di-GMP, EAL domain Ping_0483 168 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119944262 Common - NADPH-dependent FMN reductase Ping_0487 46 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 119946465 Common - transcriptional regulator of LysR family protein Ping_2840 83 COG0583 LysR, Transcriptional regulator Transcription 119946058 Common - ABC phosphate transporter inner membrane protein, PstA-like protein Ping_2407 224 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 119944599 Nonpathogen - hypothetical protein Ping_0837 2 None None None 119946556 Common - TRAP dicarboxylate transporter, DctM subunit Ping_2935 128 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 119946479 Common - phosphoribosylaminoimidazole carboxylase ATPase subunit Ping_2854 33 None None None 119944303 Common - (p)ppGpp synthetase I and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Ping_0530 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 119946399 Common queF 7-cyano-7-deazaguanine reductase Ping_2773 70 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 119945099 Common - putative monovalent cation/H+ antiporter subunit D Ping_1357 209 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 119944760 Common - hypothetical protein DUF1365 Ping_1002 63 COG3496 COG3496, Uncharacterized conserved protein Function unknown 119946694 Common - hypothetical protein Ping_3076 6 None None None 119945289 Common - hypothetical protein DUF125 Ping_1569 76 COG1814 COG1814, Uncharacterized membrane protein Function unknown 119944913 Common - DNA ligase Ping_1157 29 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 119946596 Common - translation elongation factor Ts Ping_2975 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 119945993 Common - anion transporter Ping_2334 94 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 119946235 Common - branched-chain amino acid aminotransferase Ping_2596 203 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 119946383 Nonpathogen - hypothetical protein Ping_2757 1 None None None 119946801 Common - putative transposase Ping_3195 32 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946546 Common - dihydrolipoamide dehydrogenase Ping_2925 239 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 119945042 Common - glucose-1-phosphate adenylyltransferase Ping_1296 170 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 119945669 Common - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Ping_1982 92 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 119944562 Common - potasium uptake protein with TrkA-C domain Ping_0799 116 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 119947152 Common - DNA-binding transcriptional regulator FruR Ping_3550 124 COG1609 PurR, Transcriptional regulators Transcription 119945421 Common - NmrA family protein Ping_1716 76 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 119946586 Common - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase Ping_2965 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 119945224 Common - hypothetical protein Ping_1490 8 None None None 119944504 Common - electron transport complex, RnfABCDGE type, E subunit Ping_0733 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 119944694 Common - cytochrome oxidase maturation protein, cbb3-type Ping_0933 27 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 119944979 Common - hypothetical transmembrane protein DUF6 Ping_1230 82 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 119946700 Common - tRNA-hydroxylase Ping_3082 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 119946925 Common - Lytic transglycosylase, catalytic Ping_3319 125 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 119946718 Nonpathogen - hypothetical protein Ping_3102 1 None None None 119944202 Common - Tetratricopeptide TPR_2 repeat protein Ping_0423 70 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 119944033 Nonpathogen - hypothetical protein Ping_0247 1 None None None 119944406 Common - hypothetical protein Ping_0634 13 None None None 119944938 Nonpathogen - hypothetical protein DUF1555 Ping_1185 2 None None None 119946378 Common - 6-phosphogluconate dehydrogenase Ping_2752 142 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 119945541 Common - hypothetical protein DUF1415 Ping_1845 30 COG3310 COG3310, Uncharacterized protein conserved in bacteria Function unknown 119944078 Common - Lytic transglycosylase, catalytic Ping_0293 163 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 119946703 Common - 2OG-Fe(II) oxygenase Ping_3085 30 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 119946577 Common - sodium/hydrogen exchanger Ping_2956 217 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 119946004 Common - MATE efflux family protein Ping_2346 183 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 119947296 Common - transcriptional regulator of TetR family protein Ping_3701 78 COG1309 AcrR, Transcriptional regulator Transcription 119946638 Common - cytochrome C biogenesis protein Ping_3017 91 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 119945648 Nonpathogen - hypothetical protein Ping_1960 2 None None None 119945807 Common - peptidase M6, immune inhibitor A Ping_2144 23 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 119946323 Common - Endonuclease/exonuclease/phosphatase Ping_2694 46 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 119944779 Common - serine/threonine protein kinase Ping_1021 150 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 119946133 Common - type III restriction enzyme, res subunit Ping_2486 49 COG3587 COG3587, Restriction endonuclease Defense mechanisms 119947116 Common - ribosomal protein L14 Ping_3514 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 119946560 Common - Amidase Ping_2939 151 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 119945320 Common - hypothetical protein UPF0125 Ping_1604 66 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 119947180 Common - flagellar basal-body rod protein FlgB Ping_3578 65 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 119946073 Common - hypothetical protein Ping_2422 14 None None None 119945102 Common - transposase and inactivated derivative Ping_1360 27 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 119947066 Common - glucose-1-phosphate thymidylyltransferase Ping_3464 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 119946127 Common - hypothetical protein Ping_2479 23 COG3598 RepA, RecA-family ATPase DNA replication, recombination, and repair 119945704 Common - fused PAS sensor histidine kinase protein and response regulator Ping_2024 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945000 Common - CheY-like chemotaxis protein, response regulator receiver Ping_1251 205 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119945416 Common - hypothetical protein Ping_1711 4 None None None 119947062 Common - ABC transporter ATP-binding protein Ping_3460 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 119947322 Common - ATP synthase F1, epsilon subunit Ping_3729 180 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 119946808 Common - predicted gluconate transport-associated protein Ping_3202 50 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 119943873 Common - sun protein Ping_0080 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 119946539 Nonpathogen - hypothetical protein Ping_2917 10 None None None 119945298 Common - conserved hypothetical secreted hydrolase Ping_1580 50 COG5621 COG5621, Predicted secreted hydrolase General function prediction only 119946885 Common - fumarate reductase iron-sulfur subunit Ping_3279 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 119946040 Common - hypothetical protein Ping_2384 8 None None None 119944060 Common - DNA-binding helix-turn-helix domain-containing transcriptional regulator protein AraC family protein Ping_0275 69 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 119944846 Common - malonyl CoA-acyl carrier protein transacylase Ping_1088 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 119944941 Common - nicotinate (nicotinamide) nucleotide adenylyltransferase Ping_1188 182 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 119945252 Nonpathogen - hypothetical protein Ping_1522 1 None None None 119947004 Nonpathogen - hypothetical protein Ping_3401 1 None None None 119944620 Common - hypothetical protein Ping_0859 9 None None None 119944645 Common - predicted DNA-binding transcriptional regulator, helix-turn-helix domain Ping_0884 11 COG1476 COG1476, Predicted transcriptional regulators Transcription 119945719 Nonpathogen - hypothetical protein Ping_2044 1 None None None 119944497 Common - TolA family protein Ping_0726 25 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 119943828 Nonpathogen - hypothetical protein Ping_0034 1 None None None 119943813 Common - hypothetical protein DUF796 Ping_0019 28 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 119944926 Common - Pyrrolo-quinoline quinone Ping_1171 119 COG1520 COG1520, FOG: WD40-like repeat Function unknown 119946629 Common - MaoC domain protein dehydratase Ping_3008 64 COG2030 MaoC, Acyl dehydratase Lipid metabolism 119946358 Common - glycine dehydrogenase Ping_2729 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 119946736 Common - acetate--CoA ligase Ping_3120 217 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 119947220 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein Ping_3618 77 COG0348 NapH, Polyferredoxin Energy production and conversion 119944758 Common - short-chain dehydrogenase/reductase SDR Ping_1000 232 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 119947030 Common - Substrate-binding region of ABC-type glycine betaine transport system Ping_3427 37 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 119945433 Common - nicotinate phosphoribosyltransferase Ping_1730 99 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 119944333 Common - hypothetical protein Ping_0560 17 None None None 119944557 Common - hypothetical protein Ping_0794 34 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 119946387 Common - hypothetical protein Ping_2761 10 None None None 119944611 Common - alkylhydroperoxidase (AhpD family core domain protein) Ping_0850 61 COG2128 COG2128, Uncharacterized conserved protein Function unknown 119944867 Common - transcriptional regulator, periplasmic binding protein of LacI family protein Ping_1110 118 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119946299 Common - aldo/keto reductase Ping_2667 196 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 119947307 Common - sulphate transporter Ping_3713 153 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 119946263 Common kefB glutathione-regulated potassium-efflux system protein KefB Ping_2626 199 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 119945158 Common - L-lactate transport Ping_1422 104 COG1620 LldP, L-lactate permease Energy production and conversion 119945381 Common - 3-isopropylmalate dehydratase, large subunit Ping_1669 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 119944220 Nonpathogen - O-antigen polymerase Ping_0442 1 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 119946186 Common - DNA-binding helix-turn-helix domain-containing transcriptional regulator protein AraC/XylS family protein Ping_2546 84 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 119945264 Nonpathogen - hypothetical protein Ping_1535 3 None None None 119944512 Common nrdG anaerobic ribonucleotide reductase-activating protein Ping_0741 59 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 119943799 Common ftsN cell division protein FtsN Ping_0005 26 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 119945359 Common - imidazole glycerol phosphate synthase subunit HisF Ping_1647 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 119944466 Common - Citrate transporter Ping_0694 59 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 119945327 Common - 2-dehydro-3-deoxyphosphooctonate aldolase Ping_1611 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 119946078 Common - Bile acid:sodium symporter Ping_2427 79 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 119945080 Common - glutamine amidotransferase, class-II Ping_1336 69 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 119945890 Common - hypothetical protein DUF34 Ping_2230 104 COG0327 COG0327, Uncharacterized conserved protein Function unknown 119945785 Nonpathogen - hypothetical protein Ping_2121 1 None None None 119946890 Common - hypothetical protein Ping_3284 5 None None None 119946213 Common - hypothetical protein Ping_2573 16 None None None 119944747 Common baeR response regulator BaeR Ping_0988 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119947199 Common - type III secretion FHIPEP protein Ping_3597 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 119945843 Common - Lysine exporter protein (LYSE/YGGA) Ping_2183 83 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 119945485 Common - cytochrome bd-type quinol oxidase subunit 2 Ping_1786 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 119944237 Common - Undecaprenyl-phosphate galactose phosphotransferase Ping_0461 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 119946212 Common - Uncharacterized proteins involved in stress response Ping_2572 22 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 119944195 Common - ABC transporter extracellular solute-binding protein, family 3 Ping_0415 154 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 119945952 Common - Threonine aldolase Ping_2292 102 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 119946151 Common - ABC sugar transporter extracellular solute-binding protein, family 1 Ping_2511 70 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119947055 Common - preprotein translocase, SecE subunit Ping_3452 72 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 119945591 Common - restriction modification system DNA specificity domain Ping_1897 64 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 119944934 Common - hypothetical protein Ping_1180 19 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 119945476 Common - Water Stress and Hypersensitive response Ping_1774 13 COG5608 COG5608, Conserved secreted protein Function unknown 119947076 Common - transcriptional regulator of TetR family protein Ping_3474 87 COG1309 AcrR, Transcriptional regulator Transcription 119947089 Common - sensor histidine kinase for nitrogen response ATPase domain NtrB Ping_3487 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 119944751 Common - hypothetical protein Ping_0993 3 None None None 119947174 Common flgH flagellar basal body L-ring protein Ping_3572 97 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 119945597 Common - adenylate cyclase Ping_1903 48 COG2954 COG2954, Uncharacterized protein conserved in bacteria Function unknown 119945285 Common - diguanylate cyclase/phosphodiesterase Ping_1562 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119944243 Common - F0F1 ATP synthase subunit A Ping_0467 185 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 119944501 Common - quinolinate synthetase Ping_0730 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 119946071 Common dppC dipeptide ABC transport system inner membrane binding component DppC Ping_2420 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119944719 Common - universal stress protein containing UspA domain Ping_0959 24 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 119945063 Common - exodeoxyribonuclease III Ping_1319 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 119946052 Common - acetyl-CoA acetyltransferases Ping_2401 187 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 119945608 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Ping_1917 148 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 119946600 Nonpathogen - hypothetical protein Ping_2979 1 None None None 119946310 Nonpathogen - hypothetical protein Ping_2679 2 None None None 119946238 Common - sucrose phosphorylase Ping_2600 130 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 119945604 Nonpathogen - hypothetical protein Ping_1911 1 None None None 119944966 Common - nickel-dependent hydrogenase, large subunit Ping_1215 99 COG3259 FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit Energy production and conversion 119944385 Common - transcriptional regulator of MarR family protein Ping_0613 100 COG1846 MarR, Transcriptional regulators Transcription 119944813 Common - tryptophan synthase, alpha subunit Ping_1055 210 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 119945443 Common - hypothetical protein Ping_1740 20 COG2170 COG2170, Uncharacterized conserved protein Function unknown 119944917 Common - protein of unknown function DUF329 Ping_1161 51 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 119946558 Common - 6-phosphogluconate dehydrogenase, decarboxylating Ping_2937 141 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 119946177 Common - fused PAS, GGDEF domain sensor protein and response regulator Ping_2537 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119943951 Common - 3-dehydroquinate synthase Ping_0164 208 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 119944763 Common - hypothetical protein Ping_1005 25 None None None 119945360 Common - hypothetical protein DUF411 Ping_1648 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 119943892 Common - general secretion pathway protein F Ping_0099 151 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 119946111 Common - DNA topoisomerase III Ping_2461 245 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 119947333 Common - methyltransferase GidB Ping_3740 177 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 119943995 Common - hypothetical protein DUF414 Ping_0209 23 COG3078 COG3078, Uncharacterized protein conserved in bacteria Function unknown 119945555 Common - Thioredoxin domain Ping_1859 209 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 119944439 Nonpathogen - hypothetical protein Ping_0667 1 None None None 119943947 Common pilO type IV pilus biogenesis protein PilO Ping_0160 46 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 119943999 Common - cob(I)alamin adenosyltransferase Ping_0213 138 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 119947157 Common - fructose-1,6-bisphosphatase Ping_3555 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 119945105 Common - hypothetical protein Ping_1365 17 COG3431 COG3431, Predicted membrane protein Function unknown 119944012 Common - phosphoenolpyruvate carboxylase Ping_0226 117 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 119945670 Common - signal peptide peptidase SppA, 67K type Ping_1983 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 119946348 Common - tRNA/rRNA methyltransferase (SpoU) Ping_2719 20 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 119945145 Common - aminoglycoside phosphotransferase Ping_1409 8 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 119947314 Common - CheB-type protein glutamate methylesterase Ping_3721 149 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 119944644 Common - HipA domain protein Ping_0883 12 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 119944232 Common - polysaccharide deacetylase Ping_0455 56 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 119944807 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Ping_1049 160 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 119944285 Common - hypothetical protein Ping_0511 4 None None None 119944572 Common - ribosomal RNA methyltransferase RrmJ/FtsJ Ping_0810 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 119944470 Common - aspartyl-tRNA synthetase Ping_0699 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119945964 Nonpathogen - hypothetical protein Ping_2304 1 None None None 119945681 Common - 3-oxoacyl-(acyl carrier protein) synthase III Ping_1997 148 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 119946769 Common - type I phosphodiesterase/nucleotide pyrophosphatase Ping_3162 14 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 119947284 Common - ABC transporter for phosphonate ATP-binding protein Ping_3688 249 COG4107 PhnK, ABC-type phosphonate transport system, ATPase component Inorganic ion transport and metabolism 119944803 Common - Dihydrofolate reductase Ping_1045 147 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 119945925 Common - histidine triad (HIT) protein Ping_2265 190 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 119946697 Common - hypothetical protein Ping_3079 7 None None None 119944423 Common - phenylacetate-CoA oxygenase, PaaH subunit Ping_0651 37 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 119946118 Common - conserved hypothetical transposase Ping_2468 18 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944726 Common - nucleotidyltransferase Ping_0967 110 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 119945615 Common - biotin synthase Ping_1924 178 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 119944192 Common - ABC transporter foramino acid ATP-binding protein Ping_0412 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 119945168 Common - hypothetical protein Ping_1432 22 COG4895 COG4895, Uncharacterized conserved protein Function unknown 119945578 Common - phosphoesterase, PA-phosphatase related Ping_1883 174 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 119946409 Common - Succinate-semialdehyde dehydrogenase (NAD(P)(+)) Ping_2783 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119944823 Common murQ N-acetylmuramic acid-6-phosphate etherase Ping_1065 86 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 119944366 Common - Lysine exporter protein (LYSE/YGGA) Ping_0593 84 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 119945972 Common - ferredoxin-dependent glutamate synthase Ping_2312 202 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 119945204 Common - DNA-binding protein HU beta subunit Ping_1468 211 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 119944739 Common - hypothetical protein Ping_0980 3 None None None 119946783 Common - transcriptional regulator of DeoR family protein Ping_3176 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 119944227 Nonpathogen - FAD dependent oxidoreductase Ping_0450 4 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 119943826 Common - hypothetical protein Ping_0032 5 None None None 119944150 Common - excinuclease ABC, A subunit Ping_0369 241 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 119945984 Nonpathogen - hypothetical protein Ping_2324 1 None None None 119945246 Common - ABC polar amino acid transporter inner membrane protein Ping_1515 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119944093 Nonpathogen - hypothetical protein Ping_0308 1 None None None 119944781 Common - nitrite reductase (NAD(P)H), small subunit Ping_1023 46 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 119946311 Common - protein of unknown function DUF331 Ping_2680 7 COG3036 COG3036, Uncharacterized protein conserved in bacteria Function unknown 119945399 Common - transcriptional regulator, substrate-binding of LysR family protein Ping_1689 146 COG0583 LysR, Transcriptional regulator Transcription 119945839 Common - hypothetical protein DUF81 Ping_2179 163 COG0730 COG0730, Predicted permeases General function prediction only 119946193 Common - predicted DNA-binding transcriptional regulator, helix-turn-helix domain Ping_2553 15 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 119945117 Common - thioredoxin family protein Ping_1378 65 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 119946307 Common - transporter, putative Ping_2676 53 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 119946964 Common - nucleoside diphosphate pyrophosphatase Ping_3359 108 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 119943857 Common - L-aspartate oxidase Ping_0064 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 119945692 Common - ABC sugar transporter inner membrane binding protein Ping_2009 143 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 119945350 Common - membrane bound O-acyl transferase, MBOAT family protein Ping_1636 86 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 119944218 Common - glycosyl transferase, group 1 Ping_0440 85 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 119945275 Common - hypothetical protein Ping_1550 35 COG4338 COG4338, Uncharacterized protein conserved in bacteria Function unknown 119946481 Common - 67 kDa myosin-cross-reactive antigen family protein Ping_2856 25 COG4716 COG4716, Myosin-crossreactive antigen Function unknown 119945410 Common - lipolytic enzyme, G-D-S-L family protein Ping_1704 38 COG3240 COG3240, Phospholipase/lecithinase/hemolysin Lipid metabolism / General function prediction only 119944441 Common eno phosphopyruvate hydratase Ping_0669 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 119943863 Common - hypothetical protein Ping_0070 18 COG3084 COG3084, Uncharacterized protein conserved in bacteria Function unknown 119944316 Common - drug resistance transporter, Bcr/CflA subfamily protein Ping_0543 163 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119945465 Common - sigma 54 modulation protein/ribosomal protein S30EA Ping_1763 49 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 119946300 Common - aldo/keto reductase Ping_2668 196 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 119947037 Common - sulfite reductase (NADPH) flavoprotein, alpha chain Ping_3434 108 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 119946830 Common - anti-RNA polymerase sigma 70 factor Ping_3224 24 COG3160 Rsd, Regulator of sigma D Transcription 119945024 Common - acyl-CoA thioesterase II Ping_1278 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 119946713 Common - transporter major facilitator superfamily MFS_1 Ping_3097 108 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119944379 Common - peptidase M24 Ping_0606 242 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 119946655 Common glgC glucose-1-phosphate adenylyltransferase Ping_3034 177 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 119943802 Common - UvrD/REP helicase Ping_0008 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 119946664 Common - hypothetical protein DUF167 Ping_3043 68 COG1872 COG1872, Uncharacterized conserved protein Function unknown 119946223 Nonpathogen - hypothetical protein Ping_2584 3 None None None 119947215 Common - porin, Gram-negative type Ping_3613 28 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 119944597 Nonpathogen - hypothetical protein Ping_0835 3 None None None 119946401 Common - conserved hypothetical protein 730 Ping_2775 51 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 119946969 Common rplS 50S ribosomal protein L19 Ping_3364 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 119943837 Common - hypothetical protein Ping_0044 28 None None None 119946382 Nonpathogen - Water Stress and Hypersensitive response Ping_2756 2 COG5608 COG5608, Conserved secreted protein Function unknown 119946567 Common - phage integrase family protein Ping_2946 157 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 119945772 Common - glycoside hydrolase, family 3 domain protein Ping_2107 98 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 119947260 Common - Triphosphoribosyl-dephospho-CoA synthase Ping_3658 47 COG1767 CitG, Triphosphoribosyl-dephospho-CoA synthetase Coenzyme metabolism 119946521 Common - cholera toxin transcriptional activator-like protein Ping_2898 50 COG3710 CadC, DNA-binding winged-HTH domains Transcription 119944792 Common - Carboxypeptidase Taq Ping_1034 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 119946660 Common pilT type II secretion system protein (twitching motility protein) (PilT) Ping_3039 215 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 119947210 Common - ribosomal protein L34 Ping_3608 193 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 119944461 Common - Sterol desaturase-like protein Ping_0689 74 COG3000 ERG3, Sterol desaturase Lipid metabolism 119947123 Common rplB 50S ribosomal protein L2 Ping_3521 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 119943846 Common - formamidopyrimidine-DNA glycosylase Ping_0053 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 119945423 Common - transporter, NRAMP family protein Ping_1718 19 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 119947232 Common - hypothetical protein Ping_3630 40 None None None 119946491 Common - CMP/dCMP deaminase, zinc-binding Ping_2867 109 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 119944051 Common - Exonuclease, RNase T and DNA polymerase III Ping_0265 16 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 119945623 Common - GCN5-related N-acetyltransferase Ping_1933 46 COG0456 RimI, Acetyltransferases General function prediction only 119945870 Common - lipoprotein NlpI Ping_2210 54 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 119944300 Common obgE GTPase ObgE Ping_0527 249 COG0536 Obg, Predicted GTPase General function prediction only 119945022 Common - homoserine kinase Ping_1276 120 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 119946031 Common - ABC transporter substrate-binding protein Ping_2375 60 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 119946097 Common - hypothetical protein Ping_2447 4 COG3726 AhpA, Uncharacterized membrane protein affecting hemolysin expression General function prediction only 119945408 Common - 2OG-Fe(II) oxygenase Ping_1701 41 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 119944617 Common - hypothetical protein UPF0153 Ping_0856 13 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 119945655 Common - FolC bifunctional protein Ping_1968 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 119944309 Common ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase UbiF Ping_0536 136 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 119944682 Common - tyrosyl-tRNA synthetase Ping_0921 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 119944270 Common - ribonuclease H Ping_0496 175 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 119944953 Common - fused PAS, GGDEF domain sensor protein and response regulator Ping_1202 186 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 119946723 Common - Transposon Tn7 transposition protein C Ping_3107 19 None None None 119944187 Nonpathogen - hypothetical protein Ping_0407 1 None None None 119946747 Common - ABC transporter ATP-binding protein Ping_3137 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 119946038 Common glk glucokinase Ping_2382 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 119945569 Common - Cof-like hydrolase Ping_1874 134 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 119946781 Common - ABC transporter for sugar (glycerol) ATP-binding protein Ping_3174 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119944320 Common - peptide ABC transporter, protein inner membrane binding component Ping_0547 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 119947179 Common - flagellar basal-body rod protein FlgC Ping_3577 122 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 119943933 Common - type III restriction enzyme, res subunit Ping_0145 45 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 119946431 Common - sensor histidine kinase/response regulator fused protein, ATPase domain Ping_2805 200 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119944589 Common - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Ping_0827 152 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 119946273 Common - Methyltransferase type 12 Ping_2637 47 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 119946939 Common - transporter major facilitator superfamily MFS_1 Ping_3333 61 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 119946102 Common - undecaprenyl pyrophosphate phosphatase Ping_2452 23 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 119946549 Common - transcriptional regulator (GntR family) with HTH domain Ping_2928 149 COG2186 FadR, Transcriptional regulators Transcription 119944434 Common - hexapeptide repeat acetyltransferase Ping_0662 185 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 119947327 Common - ATP synthase F0, B subunit Ping_3734 142 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 119944025 Common - hypothetical protein Ping_0239 3 None None None 119945506 Common - RNA binding S1 domain protein Ping_1810 211 COG2183 Tex, Transcriptional accessory protein Transcription 119945448 Common - two component, sigma54 specific, transcriptional regulator, Fis family protein Ping_1745 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 119946561 Common - N-acetyl-anhydromuranmyl-L-alanine amidase Ping_2940 108 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 119947150 Common - Allophanate hydrolase subunit 1 Ping_3548 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 119944046 Common - diguanylate cyclase Ping_0260 179 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944837 Common - cell division topological specificity factor MinE Ping_1079 64 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 119947117 Common - ribosomal protein S17 Ping_3515 238 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 119946065 Common - polyphosphate kinase Ping_2414 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 119946331 Common - diguanylate cyclase Ping_2702 189 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944744 Common - PTS system, mannitol-specific IIABC protein Ping_0985 41 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 119947245 Common - hypothetical protein Ping_3643 42 COG3530 COG3530, Uncharacterized protein conserved in bacteria Function unknown 119943978 Common - alanine racemase Ping_0191 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 119946449 Common - ABC polar amino acid transporter inner membrane protein Ping_2824 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 119944200 Common - hypothetical protein Ping_0421 6 None None None 119947035 Common - periplasmic protein conserved in bacteria with c-terminal histidine Ping_3432 86 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 119944269 Common - DNA polymerase III, epsilon subunit Ping_0495 191 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 119944211 Nonpathogen - Protein involved in cellulose biosynthesis (CelD)-like protein Ping_0432 5 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 119944899 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Ping_1143 209 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 119944906 Common ftsQ cell division protein FtsQ Ping_1150 74 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 119944113 Common - glycosyl transferase, family 2 Ping_0328 119 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 119946867 Common - hypothetical protein Ping_3261 2 None None None 119946876 Common - lipoprotein signal peptidase Ping_3270 199 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 119946991 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Ping_3386 137 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 119947130 Common - HAD-superfamily hydrolase, subfamily IA, variant 3 Ping_3528 188 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 119945125 Nonpathogen - cytochrome c, class I Ping_1387 5 COG2863 COG2863, Cytochrome c553 Energy production and conversion 119944856 Common - hypothetical protein Ping_1098 6 COG3911 COG3911, Predicted ATPase General function prediction only 119946756 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Ping_3149 76 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 119944665 Common - lipoprotein Ping_0904 4 None None None 119946179 Common - Aldehyde dehydrogenase (NAD(+)) Ping_2539 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119946000 Common - CheY-like chemotaxis protein, response regulator receiver Ping_2342 43 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 119945238 Common - FeS assembly protein SufD Ping_1506 170 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 119947057 Common - cysteine/glutathione ABC transporter membrane/ATP-binding component Ping_3454 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 119946627 Common - iron(III) ABC transporter, inner membrane binding component Ping_3006 163 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 119947136 Common - hypothetical protein Ping_3534 6 None None None 119945811 Common - hypothetical transmembrane protein DUF6 Ping_2149 119 COG2962 RarD, Predicted permeases General function prediction only 119944697 Common - cytochrome c oxidase, cbb3-type, subunit III Ping_0936 81 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 119945913 Common sucA succinate dehydrogenase catalytic subunit Ping_2253 202 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 119945728 Common - phosphotransferase system, lactose/cellobiose-specific IIB subunit Ping_2056 28 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 119945341 Common - glutamyl-tRNA synthetase Ping_1626 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 119945094 Common - transcriptional repressor, CopY family protein Ping_1351 11 COG3682 COG3682, Predicted transcriptional regulator Transcription 119946685 Common - hypothetical protein Ping_3066 10 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 119945947 Common - 2,4-diaminobutyrate 4-transaminase Ping_2287 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 119944586 Common - ribosomal protein S15 Ping_0824 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 119946424 Common - HflK protein Ping_2798 176 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 119944414 Common - DNA repair protein RecO Ping_0642 65 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 119946414 Common - ABC-type transporter for ribose/xylose/arabinose/galactoside systems, permease protein Ping_2788 114 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 119945367 Common - histidinol-phosphate aminotransferase Ping_1655 231 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 119944892 Common - hypothetical protein Ping_1136 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 119943830 Common - D-alanine--D-alanine ligase Ping_0036 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 119944311 Common - TRAP dicarboxylate transporter, DctM subunit Ping_0538 136 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 119944410 Common - GTP-binding protein LepA Ping_0638 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 119944833 Common - lytic murein transglycosylase Ping_1075 103 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 119944425 Common - phenylacetate-CoA oxygenase, PaaJ subunit Ping_0653 62 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 119944318 Common - ABC peptide transporter extracellular solute-binding protein, family 5 Ping_0545 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 119946450 Common - ABC transporter for amino acids ATP-binding protein Ping_2825 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 119947086 Common - glutamine synthetase, type I Ping_3484 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 119945531 Common - diguanylate cyclase with PAS/PAC sensor Ping_1835 188 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119946839 Common treR trehalose repressor Ping_3233 126 COG1609 PurR, Transcriptional regulators Transcription 119945576 Common - cold-shock DNA-binding domain protein Ping_1881 178 COG1278 CspC, Cold shock proteins Transcription 119945760 Common - ABC glycerol-3-phosphate transporter extracellular solute-binding protein, family 1 Ping_2093 93 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119947122 Common - ribosomal protein S19 Ping_3520 242 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 119944001 Common - beta-lactamase domain protein Ping_0215 223 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 119944948 Common arcA DNA-binding response regulator in two-component regulatory system with ArcB or CpxA Ping_1195 211 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 119945344 Common - uracil-xanthine permease Ping_1629 124 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 119946845 Common - tRNA delta(2)-isopentenylpyrophosphate transferase Ping_3239 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 119946777 Common - hypothetical protein Ping_3170 25 COG5477 COG5477, Predicted small integral membrane protein Function unknown 119944610 Common - monooxygenase, FAD-binding Ping_0849 34 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 119945167 Nonpathogen - hypothetical protein Ping_1431 2 None None None 119946974 Common - cytochrome c assembly protein Ping_3369 54 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 119944702 Common - DoxX family protein Ping_0941 17 COG2259 COG2259, Predicted membrane protein Function unknown 119944879 Common - rod shape-determining protein MreC Ping_1123 133 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 119947099 Common - transcriptional regulator, substrate-binding, LysR family protein Ping_3497 192 COG0583 LysR, Transcriptional regulator Transcription 119944558 Common - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase Ping_0795 184 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 119944121 Common - glycosyl transferase, group 1 Ping_0336 142 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 119947161 Common - histidinol phosphatase Ping_3559 5 None None None 119944349 Common - putative sulfite oxidase subunit YedY Ping_0576 128 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 119945553 Common - DNA polymerase II Ping_1857 65 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 119945314 Common - phage transcriptional regulator, AlpA Ping_1597 5 COG3311 AlpA, Predicted transcriptional regulator Transcription 119945934 Nonpathogen - sensory transduction histidine kinase Ping_2274 3 None None None 119944950 Common - regulatory protein for cyclic-di-GMP, GGDEF domain Ping_1198 123 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944657 Common - carbamoyl-phosphate synthase, small subunit Ping_0896 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 119943884 Common - fermentative D-lactate dehydrogenase, NAD-dependent Ping_0091 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 119945991 Common - ABC transporter ATP-binding and permease protein Ping_2332 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 119946503 Common - periplasmic serine protease DegS Ping_2880 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 119946371 Common - ABC transporter ATP-binding protein Ping_2745 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 119944524 Common - hypothetical protein DUF539 Ping_0753 5 COG2991 COG2991, Uncharacterized protein conserved in bacteria Function unknown 119945249 Common - Endonuclease/exonuclease/phosphatase Ping_1518 16 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 119944848 Common - acyl carrier protein Ping_1090 178 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 119946297 Common - hypothetical protein Ping_2665 6 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 119944996 Common - cell division control protein 48 ATPase of AAA family CDC48 subfamily Ping_1247 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 119946857 Common - hypothetical protein Ping_3251 2 None None None 119946947 Common - predicted Fe ABC transporter Ping_3341 125 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 119946162 Common - DNA-binding NERD domain-containing protein Ping_2522 40 COG0551 TopA, Zn-finger domain associated with topoisomerase type I DNA replication, recombination, and repair 119945799 Nonpathogen - hypothetical protein Ping_2136 1 None None None 119946613 Common - urease, gamma subunit Ping_2992 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 119946692 Common - globin Ping_3074 51 COG2346 COG2346, Truncated hemoglobins General function prediction only 119944619 Common - hypothetical protein DUF526 Ping_0858 33 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 119946392 Common - thioesterase superfamily protein Ping_2766 130 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 119946583 Common - Ribonuclease H Ping_2962 220 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 119945375 Common - outer membrane lipoprotein carrier protein LolA Ping_1663 70 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 119945231 Common - Radical SAM domain protein Ping_1497 90 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 119945789 Common - hypothetical protein Ping_2125 12 None None None 119945928 Common - hypothetical protein DUF1414 Ping_2268 21 COG3082 COG3082, Uncharacterized protein conserved in bacteria Function unknown 119946463 Common - nuclease (SNase domain protein) Ping_2838 35 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 119945699 Common - galactose-1-phosphate uridylyltransferase Ping_2016 79 COG1085 GalT, Galactose-1-phosphate uridylyltransferase Energy production and conversion 119946934 Common - response regulator receiver modulated diguanylate cyclase/phosphodiesterase Ping_3328 223 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 119944674 Common - outer membrane lipoprotein LolB Ping_0913 47 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 119945885 Common - hypothetical protein DUF218 Ping_2225 69 COG1434 COG1434, Uncharacterized conserved protein Function unknown 119946130 Common - phage transcriptional regulator, AlpA Ping_2482 9 COG3311 AlpA, Predicted transcriptional regulator Transcription 119943797 Common hslU ATP-dependent protease ATP-binding subunit Ping_0003 210 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 119944600 Common - ATP-dependent RNA helicase, DEAD box family protein Ping_0838 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 119944769 Common - Lysine exporter protein (LYSE/YGGA) Ping_1011 82 COG1279 COG1279, Lysine efflux permease General function prediction only 119945898 Common - exodeoxyribonuclease VII, small subunit Ping_2238 87 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 119944445 Common - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Ping_0673 187 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 119944981 Common - chaperone DnaK-related protein Ping_1232 37 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 119945306 Common - CRISPR-associated protein, Cse4 family protein Ping_1589 42 None None None 119945657 Common - hypothetical protein Ping_1970 2 None None None 119944999 Common - sensor histidine kinase, PAS domain Ping_1250 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945071 Common - co-chaperone Hsc20 Ping_1327 54 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 119945634 Nonpathogen - hypothetical protein Ping_1946 3 None None None 119944490 Common ruvB Holliday junction DNA helicase B Ping_0719 225 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 119946554 Common - TRAP dicarboxylate transporter- DctP subunit Ping_2933 111 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 119946290 Common - asparagine synthase Ping_2657 133 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 119947330 Common - ATP synthase I chain Ping_3737 19 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 119945660 Common - short-chain dehydrogenase/reductase SDR Ping_1973 228 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 119947141 Common - hypoxanthine-guanine phosphoribosyltransferase Ping_3539 40 COG2236 COG2236, Predicted phosphoribosyltransferases General function prediction only 119946763 Common - thiol:disulfide interchange protein DsbA Ping_3156 68 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 119946459 Common - ABC transporter for amino acids ATP-binding protein Ping_2834 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 119944408 Common - cyclic nucleotide-binding protein Ping_0636 123 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 119944140 Common - hypothetical protein Ping_0359 4 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 119944534 Common - transposase, IS4 family protein Ping_0767 32 COG5433 COG5433, Transposase DNA replication, recombination, and repair 119946470 Common - outer membrane efflux protein Ping_2845 96 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 119945335 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Ping_1619 138 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 119946901 Common - aspartate carbamoyltransferase regulatory subunit Ping_3295 64 COG1781 PyrI, Aspartate carbamoyltransferase, regulatory subunit Nucleotide transport and metabolism 119946135 Common - hypothetical protein Ping_2489 15 None None None 119946825 Common - phosphoribosylamine--glycine ligase Ping_3219 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 119944972 Common - putative nitrogen regulatory protein P-II family protein Ping_1222 22 None None None 119947202 Common - acetyl-CoA synthetase Ping_3600 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 119944911 Common - preprotein translocase, SecA subunit Ping_1155 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 119947213 Common - 60 kDa inner membrane insertion protein Ping_3611 214 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 119944299 Common rpmA 50S ribosomal protein L27 Ping_0526 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 119945967 Common - hypothetical protein DUF1568 Ping_2307 18 None None None 119945755 Common - alpha/beta hydrolase fold Ping_2087 151 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119946634 Common rpsA 30S ribosomal protein S1 Ping_3013 223 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 119944430 Common - phenylacetic acid degradation protein PaaD Ping_0658 70 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 119944176 Common - permease YjgP/YjgQ family protein Ping_0396 86 COG0795 COG0795, Predicted permeases General function prediction only 119946548 Common aceE pyruvate dehydrogenase subunit E1 Ping_2927 145 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 119944887 Common - hypothetical protein DUF615 Ping_1131 61 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 119945092 Nonpathogen - hypothetical protein Ping_1349 1 None None None 119944577 Common - hypothetical protein DUF150 Ping_0815 184 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 119944784 Common - molybdopterin oxidoreductase Ping_1026 191 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 119944531 Common - lipopolysaccharide biosynthesis Ping_0764 18 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 119944135 Common - alpha/beta hydrolase fold Ping_0351 112 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 119945519 Common - hypothetical protein Ping_1823 7 None None None 119945803 Common - fused multi-sensor protein containing CHASE and PAS/PAC domains Ping_2140 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 119945270 Common - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Ping_1543 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 119944118 Common - O-antigen polymerase Ping_0333 19 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 119945502 Common - heat shock protein Hsp20 Ping_1806 161 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 119944128 Common - D-ribose transporter subunit RbsB Ping_0343 137 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 119947203 Common - Pyruvate dehydrogenase (acetyl-transferring) Ping_3601 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 119945089 Common - hypothetical protein Ping_1346 11 None None None 119945583 Common - succinic semialdehyde dehydrogenase Ping_1888 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 119944625 Common - DNA topoisomerase IV subunit A Ping_0864 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 119946438 Common - hypothetical protein DUF58 Ping_2813 99 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 119947320 Common glyQ glycyl-tRNA synthetase subunit alpha Ping_3727 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 119946912 Common - formate/nitrite transporter Ping_3306 87 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 119946201 Nonpathogen - hypothetical protein Ping_2561 4 None None None 119945817 Common - hypothetical transmembrane protein DUF6 Ping_2155 25 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 119946016 Common rpiR DNA-binding transcriptional regulator HexR Ping_2360 93 COG1737 RpiR, Transcriptional regulators Transcription 119946920 Common - integral inner membrane protein UPF0118 Ping_3314 144 COG0628 PerM, Predicted permease General function prediction only 119946515 Common - RNA polymerase, sigma 54 subunit, RpoN Ping_2892 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 119946919 Common - S-adenosylmethionine-dependent methyltransferase Ping_3313 127 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 119945301 Nonpathogen - hypothetical protein Ping_1584 1 None None None 119944991 Common - (Acyl-carrier-protein) phosphodiesterase Ping_1242 97 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 119944777 Common asmA outer membrane protein assembly protein AsmA Ping_1019 64 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 119944160 Nonpathogen - hypothetical protein Ping_0380 2 None None None 119944607 Nonpathogen - hypothetical protein Ping_0845 3 None None None 119946982 Nonpathogen - oxaloacetate decarboxylase subunit gamma Ping_3377 1 COG3630 OadG, Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit Energy production and conversion 119946772 Nonpathogen - hypothetical protein Ping_3165 1 None None None 119943905 Common - Homoserine O-succinyltransferase Ping_0112 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 119946536 Common - ABC transporter for sugar/spermidine/putrescine/iron/thiamine ATP-binding protein Ping_2913 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 119945746 Common - putative transporter, BCCT family protein Ping_2076 75 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 119947172 Common - putative flagellar protein FlgJ Ping_3570 35 COG3951 COG3951, Rod binding protein Cell envelope biogenesis, outer membrane / Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 119944956 Common - diguanylate cyclase with PAS/PAC sensor Ping_1205 183 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 119944878 Common - cell shape determining protein, MreB/Mrl family protein Ping_1122 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 119945770 Common - UvrD/REP helicase Ping_2104 221 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 119947236 Common - permease Ping_3634 24 COG0701 COG0701, Predicted permeases General function prediction only 119944209 Common wecC UDP-N-acetyl-D-mannosamine dehydrogenase Ping_0430 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 119945139 Common - phenylalanyl-tRNA synthetase, alpha subunit Ping_1403 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 119944545 Common - glycosyl transferase, family 2 Ping_0779 168 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 119945132 Common - transposase IS4 family protein Ping_1395 44 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 119945906 Common - coproporphyrinogen III oxidase Ping_2246 72 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 119947229 Common - hypothetical protein DUF1289 Ping_3627 13 COG3313 COG3313, Predicted Fe-S protein General function prediction only 119945181 Common - hypothetical protein Ping_1445 10 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 119945215 Common - Carbonate dehydratase Ping_1480 52 COG3338 Cah, Carbonic anhydrase Inorganic ion transport and metabolism 119946953 Common - SapC family protein Ping_3347 26 None None None 119943818 Common - pentapeptide repeat protein Ping_0024 104 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown