Escherichia coli 536, complete genome NC_008253 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 110642192 Pathogen - hypothetical protein ECP_2022 1 None None None 110644125 Common - putative protoheme IX biogenesis protein ECP_3994 46 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 110644173 Pathogen - hypothetical protein ECP_4042 1 None None None 110642903 Common - putative electron transfer flavoprotein subunit YgcQ ECP_2743 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 110642139 Common - probable amidase ECP_1969 218 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 110643083 Common - putative SPFH domain protein ECP_2928 102 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 110643671 Common glgC glucose-1-phosphate adenylyltransferase ECP_3524 175 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 110643159 Pathogen - hypothetical protein ECP_3005 1 None None None 110643038 Common lysS lysyl-tRNA synthetase ECP_2883 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 110643172 Common - hypothetical protein ECP_3018 3 None None None 110640951 Common - quinolinate synthetase ECP_0761 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 110642489 Common - NADH dehydrogenase subunit E ECP_2324 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 110643124 Common - fimbrial usher protein PixC ECP_2970 27 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110643698 Common - leucine-specific binding protein precursor ECP_3551 143 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 110642972 Pathogen - hypothetical protein ECP_2817 1 None None None 110640673 Common - hypothetical protein ECP_0471 8 None None None 110644823 Common lplA lipoate-protein ligase A ECP_4770 74 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 110641187 Common - TrpR binding protein WrbA ECP_1003 106 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 110641227 Common - hypothetical protein ECP_1043 2 None None None 110641969 Common - phosphogluconate dehydratase ECP_1795 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 110641020 Pathogen - hypothetical protein ECP_0830 1 None None None 110643941 Pathogen - hypothetical protein ECP_3799 1 None None None 110642169 Common - hypothetical protein YaiP ECP_1999 112 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110643554 Common rplV 50S ribosomal protein L22 ECP_3403 218 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 110641744 Common - MalY protein ECP_1566 224 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 110643958 Pathogen - CS12 fimbria minor subunit protein precursor ECP_3816 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643052 Common - glycine cleavage system protein H ECP_2897 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 110644229 Common - hypothetical protein ECP_4100 46 COG2944 COG2944, Predicted transcriptional regulator Transcription 110643398 Common - hypothetical protein YhbT ECP_3245 33 COG3154 COG3154, Putative lipid carrier protein Lipid metabolism 110641732 Common - DNA replication terminus site-binding protein ECP_1554 14 None None None 110644323 Common - DNA-directed RNA polymerase subunit beta' ECP_4201 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 110641435 Common - predicted inner membrane protein ECP_1253 10 None None None 110640946 Common - colicin uptake protein TolR ECP_0749 103 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 110642412 Common napH quinol dehydrogenase membrane component ECP_2245 59 COG0348 NapH, Polyferredoxin Energy production and conversion 110644706 Common - hypothetical protein ECP_4599 67 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 110640561 Common - hypothetical protein YagZ precursor ECP_0356 5 None None None 110643213 Common - hypothetical protein YghO ECP_3059 38 None None None 110642243 Common - phosphomannomutase ECP_2073 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 110644828 Common - hypothetical protein ECP_4775 27 COG4737 COG4737, Uncharacterized protein conserved in bacteria Function unknown 110641152 Common helD DNA helicase IV ECP_0968 228 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 110642531 Common - hypothetical protein ECP_2366 149 COG0730 COG0730, Predicted permeases General function prediction only 110644799 Common - DNA replication protein DnaC ECP_4692 41 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110641191 Common - hypothetical protein ECP_1007 53 COG0778 NfnB, Nitroreductase Energy production and conversion 110644095 Common - putative regulatory protein, GntR family ECP_3955 125 COG2186 FadR, Transcriptional regulators Transcription 110640413 Common - hypothetical protein ECP_0202 4 None None None 110642418 Common - ecotin precursor ECP_2251 23 COG4574 Eco, Serine protease inhibitor ecotin General function prediction only 110642791 Common - hypothetical protein YgaP ECP_2631 64 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 110644674 Common - putative transposase ECP_4567 50 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641498 Common - 23S rRNA pseudouridylate synthase B ECP_1316 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 110641993 Pathogen - hypothetical protein ECP_1821 1 None None None 110641675 Common - hypothetical protein YdeP ECP_1497 173 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110641469 Common - aldehyde-alcohol dehydrogenase ECP_1287 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 110641165 Common - hydrogenase-1 operon protein HyaE ECP_0981 10 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 110641369 Pathogen - hypothetical protein ECP_1187 1 None None None 110640909 Common - putrescine-ornithine antiporter ECP_0710 176 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110643669 Common - glycogen phosphorylase ECP_3522 146 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 110643876 Common - formamidopyrimidine-DNA glycosylase ECP_3733 180 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 110642985 Common - N-acetylglutamate synthase ECP_2830 202 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 110642951 Common - cysteine sulfinate desulfinase ECP_2793 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 110641199 Common - sodium/proline symporter ECP_1015 177 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 110640583 Common - hypothetical protein YkgH ECP_0378 3 None None None 110643143 Common - putative transposase (orfB) ECP_2989 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641986 Common - hypothetical protein ECP_1812 86 COG1801 COG1801, Uncharacterized conserved protein Function unknown 110643854 Common - glutaredoxin 3 ECP_3711 132 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 110643188 Common - putative glycosyltransferase ECP_3034 4 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110643059 Common - predicted ligase ECP_2904 189 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 110641601 Common - glyceraldehyde 3-phosphate dehydrogenase C ECP_1421 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 110642459 Common - putative nudix hydrolase YfaO ECP_2294 5 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 110641559 Common tpx thiol peroxidase ECP_1377 111 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 110644460 Common - putative transcriptional regulator ECP_4345 112 COG2188 PhnF, Transcriptional regulators Transcription 110642396 Common - 50S ribosomal protein L25 ECP_2226 144 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 110642091 Pathogen - hypothetical protein ECP_1919 2 None None None 110642451 Common - hypothetical protein ECP_2286 30 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110641726 Common - protein YdgH precursor ECP_1548 11 None None None 110641730 Common - DNA-binding response regulator in two-component regulatory system with RstB ECP_1552 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110641707 Common - starvation sensing protein RspA ECP_1529 107 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110643160 Common - hypothetical protein ECP_3006 2 None None None 110643742 Common - hypothetical transcriptional regulator YhiF ECP_3595 2 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110641233 Common - hypothetical protein ECP_1049 114 COG2353 COG2353, Uncharacterized conserved protein Function unknown 110640692 Common - cytochrome o ubiquinol oxidase subunit II ECP_0492 139 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 110641502 Common - short chain dehydrogenase ECP_1320 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110641076 Common - aquaporin Z ECP_0890 98 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 110640882 Common - putative ATP-binding PhoH-like protein ECP_0683 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 110641554 Common - outer membrane protein G precursor ECP_1372 3 None None None 110643512 Common - hypothetical protein YhdV ECP_3361 7 None None None 110641978 Common ruvB Holliday junction DNA helicase B ECP_1804 233 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 110641646 Common - respiratory nitrate reductase 2 delta chain ECP_1468 39 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 110644199 Common - periplasmic protein disulfide isomerase I ECP_4070 66 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 110641066 Common - predicted lipoprotein ECP_0880 9 None None None 110641159 Common - sulfurtransferase TusE ECP_0975 60 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 110642342 Common - D-lactate dehydrogenase ECP_2172 61 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 110641511 Common - aconitate hydratase ECP_1329 222 COG1048 AcnA, Aconitase A Energy production and conversion 110643896 Common - hypothetical membrane protein YicH ECP_3753 13 None None None 110641380 Common - hypothetical protein YcgX ECP_1198 4 COG5562 COG5562, Phage envelope protein General function prediction only 110644104 Common - ketol-acid reductoisomerase ECP_3967 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 110643933 Pathogen - hypothetical protein ECP_3791 1 None None None 110643240 Common - aldo-keto reductase ECP_3086 195 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 110644293 Common - PTS system, fructose-like-2 IIB component 2 ECP_4166 68 COG1445 FrwB, Phosphotransferase system fructose-specific component IIB Carbohydrate transport and metabolism 110643277 Common - esterase YqiA ECP_3123 47 COG3150 COG3150, Predicted esterase General function prediction only 110641766 Common - hypothetical protein ECP_1590 168 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110644226 Common - putative acetyltransferase ECP_4097 48 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 110641429 Common - dihydroxyacetone kinase ADP-binding subunit ECP_1247 76 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 110643770 Common - hypothetical metabolite transport protein YhjE ECP_3623 126 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110644467 Common - hypothetical protein ECP_4352 12 COG1160 COG1160, Predicted GTPases General function prediction only 110640518 Pathogen - hypothetical protein ECP_0313 1 None None None 110640833 Common - hypothetical protein YbdM (ParB-like nuclease domain) ECP_0634 17 COG1475 Spo0J, Predicted transcriptional regulators Transcription 110640496 Common - hypothetical protein ECP_0290 3 None None None 110640781 Common - carbamate kinase ECP_0581 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 110644566 Common - putative oxidoreductase ECP_4454 76 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 110640214 Pathogen - thr operon leader peptide ECP_0001 1 None None None 110644315 Common - elongation factor Tu ECP_4193 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 110643928 Pathogen - hypothetical protein ECP_3786 1 None None None 110642477 Common - ribonuclease Z ECP_2312 134 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 110644831 Common - lytic murein transglycosylase ECP_4778 171 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 110643762 Common - DNA-binding transcriptional dual regulator ECP_3615 24 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110640978 Common - adenosylmethionine--8-amino-7-oxononanoate transaminase ECP_0788 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 110642465 Common arnT 4-amino-4-deoxy-L-arabinose transferase ECP_2300 83 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 110640423 Common - transcriptional regulator, LysR family ECP_0214 192 COG0583 LysR, Transcriptional regulator Transcription 110643137 Common - putative sugar kinase, ribokinase family ECP_2983 177 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110640533 Common - predicted lysine/cadaverine transporter ECP_0328 133 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110640545 Pathogen - hypothetical protein ECP_0340 3 None None None 110641687 Common - aldehyde-dehydrogenase like proteinYneI ECP_1509 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110643331 Common - hypothetical oxidoreductase YgjR ECP_3178 136 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 110641264 Common - hypothetical protein ECP_1080 55 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 110644188 Common fre FMN reductase ECP_4057 102 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 110643786 Common - hypothetical protein ECP_3639 3 None None None 110642363 Common folE GTP cyclohydrolase I ECP_2193 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 110641346 Pathogen - hypothetical protein ECP_1164 1 None None None 110641377 Common - hypothetical protein ECP_1195 56 COG0456 RimI, Acetyltransferases General function prediction only 110643119 Common - hypothetical protein (EAL domain) ECP_2965 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110643621 Common - DNA adenine methylase ECP_3472 97 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 110641698 Common - putative MFS-type transporter YdeE ECP_1520 56 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642213 Common - hypothetical protein ECP_2043 23 None None None 110643597 Common - cAMP-regulatory protein ECP_3448 167 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 110640736 Common hemH ferrochelatase ECP_0536 157 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 110640380 Common - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase ECP_0169 105 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 110644086 Common yieM hypothetical protein ECP_3944 28 COG2425 COG2425, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 110642703 Common - IS putative transposase ECP_2543 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644803 Common - putative transcriptional regulator (LuxR/UhpA family) ECP_4696 16 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110640804 Common - copper/silver efflux system membrane fusion protein CusB ECP_0605 130 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110641898 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YdjL ECP_1724 210 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110643660 Common - hypothetical protein ECP_3513 3 None None None 110644356 Common - PTS system, sorbose-specific IIC component ECP_4235 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 110641426 Common - iron ABC transporter, solute-binding protein ECP_1244 47 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 110642176 Common - hypothetical protein ECP_2006 23 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 110643461 Common - ClpXP protease specificity-enhancing factor ECP_3310 64 COG2969 SspB, Stringent starvation protein B General function prediction only 110640792 Common - putative DNA integration/recombination/invertion protein ECP_0593 50 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 110640227 Common - chaperone protein DnaK ECP_0014 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 110641739 Common - beta-D-glucuronidase ECP_1561 71 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 110640823 Common - iron-enterobactin transporter periplasmic binding protein ECP_0624 53 COG4592 FepB, ABC-type Fe2+-enterobactin transport system, periplasmic component Inorganic ion transport and metabolism 110644067 Common pstA phosphate transporter permease subunit ECP_3925 227 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 110642924 Common - antitoxin MazE ECP_2764 28 COG2336 MazE, Growth regulator Signal transduction mechanisms 110642064 Common - hypothetical protein ECP_1892 50 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 110640327 Common - colicin immunity protein ECP_0116 8 None None None 110642074 Common - transcriptional regulatory protein YedW ECP_1902 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110641962 Common - exodeoxyribonuclease X ECP_1788 160 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 110644838 Common - sensory histidine kinase CreC ECP_4785 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110643169 Common - hypothetical protein YeeU ECP_3015 10 None None None 110643359 Common - hypothetical protein ECP_3206 183 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 110640855 Common - hypothetical protein YbeM containing carbon-nitrogen hydrolase domain ECP_0656 191 COG0388 COG0388, Predicted amidohydrolase General function prediction only 110642012 Common araH L-arabinose transporter permease protein ECP_1840 141 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 110640553 Common - InsB protein ECP_0348 11 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 110642430 Common - acetoacetate metabolism regulatory protein AtoC ECP_2263 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110640403 Common dnaE DNA polymerase III subunit alpha ECP_0192 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 110643591 Common - glutathione-regulated potassium-efflux system ancillary protein KefG ECP_3442 63 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 110640576 Common - hypothetical secreted protein ECP_0371 3 None None None 110644661 Common - alpha-hemolysin translocation ATP-binding protein HlyB ECP_4554 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 110644641 Pathogen - PapF protein ECP_4534 2 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643223 Common - hypothetical ATP-binding protein YghR ECP_3069 4 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 110642406 Common - cytochrome c-type biogenesis protein CcmE ECP_2237 92 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 110640970 Common - hypothetical transcriptional regulator ECP_0780 155 COG0583 LysR, Transcriptional regulator Transcription 110641141 Common - hypothetical protein ECP_0957 29 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 110642746 Common - hypothetical protein YfiQ ECP_2586 149 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 110640775 Common - hypothetical protein ECP_0575 33 COG3257 GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization General function prediction only 110643445 Common - sugar-specific enzyme IIA component of PTS ECP_3292 133 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 110641015 Common glnH glutamine ABC transporter periplasmic protein ECP_0825 185 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 110642893 Common cysN sulfate adenylyltransferase subunit 1 ECP_2733 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 110643981 Pathogen - hypothetical protein ECP_3839 2 None None None 110644309 Common - tRNA (uracil-5-)-methyltransferase ECP_4182 179 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 110642486 Common - NADH dehydrogenase subunit H ECP_2321 186 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 110644266 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase ECP_4139 103 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 110640289 Common leuO leucine transcriptional activator ECP_0078 123 COG0583 LysR, Transcriptional regulator Transcription 110643542 Common rpsE 30S ribosomal protein S5 ECP_3391 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 110641320 Common - hypothetical protein ECP_1138 10 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 110644648 Common - PapA ECP_4541 14 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110642524 Common - erythronate-4-phosphate dehydrogenase ECP_2359 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 110642134 Common - putative thioesterase ECP_1964 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 110642768 Common trmD tRNA (guanine-N(1)-)-methyltransferase ECP_2608 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 110644442 Common - hypothetical protein YjcS ECP_4325 44 COG2015 COG2015, Alkyl sulfatase and related hydrolases Secondary metabolites biosynthesis, transport, and catabolism 110643294 Common - putative membrane protein YqiK ECP_3140 43 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 110641006 Common - hypothetical protein ECP_0816 11 None None None 110641489 Common - putative cytoplasmic protein ECP_1307 11 None None None 110640388 Common rpsB 30S ribosomal protein S2 ECP_0177 226 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 110641613 Common - hypothetical lipoprotein YdcL precursor ECP_1435 12 None None None 110640530 Common - lysyl-tRNA synthetase, heat inducible ECP_0325 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 110641392 Common - hypothetical protein YmgD precursor ECP_1210 2 None None None 110643588 Common - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) ECP_3437 130 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 110642314 Common - nickel/cobalt efflux protein RcnA ECP_2144 32 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 110644454 Common - phosphonates transport ATP-binding protein PhnL ECP_4339 249 COG4778 PhnL, ABC-type phosphonate transport system, ATPase component Inorganic ion transport and metabolism 110643392 Common - hypothetical membrane protein YraQ ECP_3239 73 COG0701 COG0701, Predicted permeases General function prediction only 110644102 Common - threonine dehydratase ECP_3965 221 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 110644341 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase ECP_4219 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 110640267 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase ECP_0054 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 110640626 Common - regulator protein FrmR ECP_0422 69 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 110640632 Common - taurine transporter subunit ECP_0430 199 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 110643811 Common - hypothetical protein ECP_3666 10 COG4682 COG4682, Predicted membrane protein Function unknown 110643988 Pathogen - hypothetical protein ECP_3846 1 None None None 110641054 Common - ribosomal protein S6 modification protein ECP_0866 153 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 110643966 Common - putative periplasmic binding protein ECP_3824 178 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 110641820 Common - probable electron transfer flavoprotein-quinone oxidoreductase YdiS ECP_1646 118 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 110641098 Common - putative MFS family transporter protein ECP_0912 101 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 110643581 Common - elongation factor G ECP_3430 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 110640873 Common rihA ribonucleoside hydrolase 1 ECP_0674 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 110644077 Common - F0F1 ATP synthase subunit B ECP_3935 127 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 110640238 Common lspA lipoprotein signal peptidase ECP_0025 195 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110643076 Common - possible ABC-transport protein, ATP-binding component ECP_2921 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 110640260 Common - glutathione-regulated potassium-efflux system protein KefC ECP_0047 196 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 110643938 Common - hypothetical protein ECP_3796 18 None None None 110643152 Common - putative hemolysin expression modulating protein ECP_2998 12 None None None 110644693 Pathogen - hypothetical protein ECP_4586 1 None None None 110640394 Common cdsA CDP-diglyceride synthase ECP_0183 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 110643838 Common - hypothetical protein YibH ECP_3695 139 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110642635 Common - malic enzyme ECP_2475 216 COG0281 SfcA, Malic enzyme Energy production and conversion 110643491 Common - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit ECP_3340 197 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 110644400 Common - two component response regulator ECP_4281 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110644113 Common - UDP-N-acetyl-D-mannosamine dehydrogenase ECP_3978 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 110641417 Common ldcA L,D-carboxypeptidase A ECP_1235 80 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 110642991 Common - hypothetical protein ECP_2836 6 None None None 110644258 Common - hypothetical protein ECP_4131 14 COG3691 COG3691, Uncharacterized protein conserved in bacteria Function unknown 110640919 Common - putative POT family transport protein YbgH ECP_0722 80 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 110644530 Common - putative GTPase HflX ECP_4418 232 COG2262 HflX, GTPases General function prediction only 110640419 Common - DL-methionine transporter permease subunit ECP_0208 210 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 110641345 Common - TonB-like membrane protein ECP_1163 21 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 110642600 Common - phosphoenolpyruvate-protein phosphotransferase ECP_2440 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 110642271 Common - tyrosine phosphatase ECP_2101 134 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 110641875 Common - hypothetical ABC transporter permease protein YnjC ECP_1701 25 COG4135 COG4135, ABC-type uncharacterized transport system, permease component General function prediction only 110644371 Common malG maltose transporter permease ECP_4250 182 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 110644122 Common - putative transport protein YifK ECP_3987 124 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110640721 Common - hemolysin expression-modulating protein ECP_0521 12 None None None 110644556 Common - hypothetical protein YjfY precursor ECP_4444 8 None None None 110640310 Common - SecA regulator SecM ECP_0099 11 None None None 110640959 Common - galactose-1-phosphate uridylyltransferase ECP_0769 79 COG1085 GalT, Galactose-1-phosphate uridylyltransferase Energy production and conversion 110643961 Pathogen - hypothetical protein ECP_3819 2 None None None 110643494 Common - putative sugar kinase, ribokinase family ECP_3343 178 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110641444 Common - putative transcriptional regulator ECP_1262 51 COG2912 COG2912, Uncharacterized conserved protein Function unknown 110643100 Common - hypothetical protein YggS ECP_2945 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 110644447 Common - DNA-binding transcriptional repressor RpiR ECP_4332 92 COG1737 RpiR, Transcriptional regulators Transcription 110640340 Common - hypothetical protein ECP_0129 11 None None None 110642495 Common - hypothetical protein ECP_2330 34 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 110641607 Common mdoD glucan biosynthesis protein D ECP_1429 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 110640288 Common - leu operon leader peptide ECP_0077 2 None None None 110642278 Common - 3-methyl-adenine DNA glycosylase II ECP_2108 102 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 110644147 Common - ATP-dependent DNA helicase RecQ ECP_4016 238 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 110641933 Common - hypothetical protein YoaE (putative membrane protein) ECP_1759 214 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 110642823 Common - PTS system, glucitol/sorbitol-specific IIBC component ECP_2663 22 COG3732 SrlE, Phosphotransferase system sorbitol-specific component IIBC Carbohydrate transport and metabolism 110641332 Common - replication protein 14 ECP_1150 11 None None None 110640740 Common - putative fosmidomycin resistance antibiotic resistance transmembrane protein ECP_0540 66 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 110644407 Common - hypothetical protein YjcB ECP_4288 7 None None None 110644286 Common gldA glycerol dehydrogenase ECP_4159 115 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 110644485 Common - hypothetical protein YjdJ ECP_4370 22 COG2388 COG2388, Predicted acetyltransferase General function prediction only 110644754 Common - tyrosine recombinase/inversion of on/off regulator of fimA ECP_4647 212 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 110641176 Common - periplasmic sensory protein associated with the TorRS two-component regulatory system ECP_0992 35 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110644015 Common - regulatory protein UhpC ECP_3873 155 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643354 Common - hypothetical protein YhaK ECP_3201 97 COG1741 COG1741, Pirin-related protein General function prediction only 110642661 Common - phosphoribosylaminoimidazole synthetase ECP_2501 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 110642417 Common - hypothetical protein ECP_2250 1 None None None 110644659 Common - putative transposase ECP_4552 70 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641672 Common - putative sulfatase YdeN precursor ECP_1494 91 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 110641907 Common - hypothetical protein YeaI (putative membrane protein) ECP_1733 175 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110642527 Common - 3-oxoacyl-(acyl carrier protein) synthase I ECP_2362 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110644542 Common - putative membrane protein YjfM ECP_4430 4 COG5463 COG5463, Predicted integral membrane protein Function unknown 110642653 Common gcvR glycine cleavage system transcriptional repressor ECP_2493 31 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 110642026 Common - protein FliZ ECP_1854 9 None None None 110640297 Common - peptidoglycan synthetase FtsI precursor ECP_0086 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 110643732 Common - universal stress protein ECP_3585 37 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 110641542 Common - thiosulfate:cyanide sulfurtransferase (rhodanese) ECP_1360 77 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 110643652 Common - RNA 3'-terminal-phosphate cyclase ECP_3505 47 COG0430 RCL1, RNA 3'-terminal phosphate cyclase RNA processing and modification 110641768 Common - superoxide dismutase ECP_1592 87 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 110642547 Common - long-chain fatty acid outer membrane transporter ECP_2382 79 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 110641355 Pathogen - DNA packaging protein FI ECP_1173 2 None None None 110643756 Common - acid-resistance membrane protein ECP_3609 16 COG3247 HdeD, Uncharacterized conserved protein Function unknown 110640843 Common citG triphosphoribosyl-dephospho-CoA synthase ECP_0644 48 COG1767 CitG, Triphosphoribosyl-dephospho-CoA synthetase Coenzyme metabolism 110642730 Common - lsignal peptidase I ECP_2570 203 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 110643841 Common - mannitol-1-phosphate 5-dehydrogenase ECP_3698 91 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 162138274 Common nepI ribonucleoside transporter ECP_3868 178 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644477 Common - alpha-galactosidase ECP_4362 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 110643616 Common - hypothetical protein YhfY ECP_3467 6 None None None 110644204 Common - probable GTP-binding protein EngB ECP_4075 175 COG0218 COG0218, Predicted GTPase General function prediction only 110641923 Common - outer membrane lipoprotein, Slp family ECP_1749 29 COG3065 Slp, Starvation-inducible outer membrane lipoprotein Cell envelope biogenesis, outer membrane 110643827 Common - 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM ECP_3682 29 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 110643768 Common - hypothetical transcriptional regulator YhjC ECP_3621 178 COG0583 LysR, Transcriptional regulator Transcription 110643424 Common - hypothetical transport protein YhbE ECP_3271 72 COG2962 RarD, Predicted permeases General function prediction only 110644100 Common - branched-chain amino acid aminotransferase ECP_3963 220 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 110643050 Common - 6-phospho-beta-glucosidase BglA ECP_2895 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 110640247 Common - DNA-binding transcriptional activator CaiF ECP_0034 4 None None None 110643328 Common - putative ribosomal RNA small subunit methyltransferase D ECP_3175 95 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 110641280 Common - putative outer membrane lipoprotein YcfL ECP_1096 10 COG5633 COG5633, Predicted periplasmic lipoprotein General function prediction only 110641011 Common - putative SAM-dependent methyltransferase ECP_0821 28 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 110642819 Common recA recombinase A ECP_2659 223 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 110642934 Pathogen - hypothetical protein ECP_2774 1 None None None 110642108 Common - salicylate synthase Irp9 ECP_1937 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 110641826 Common - phospho-2-dehydro-3-deoxyheptonate aldolase ECP_1652 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 110643709 Common zntA zinc/cadmium/mercury/lead-transporting ATPase ECP_3562 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 110643135 Common - putative cytoplasmic protein ECP_2981 14 None None None 110643618 Common - tryptophanyl-tRNA synthetase ECP_3469 233 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110642378 Common fruK 1-phosphofructokinase ECP_2208 106 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 110641049 Common - hypothetical protein ECP_0861 57 COG2985 COG2985, Predicted permease General function prediction only 110642945 Common - fucose operon FucU protein ECP_2787 31 COG4154 FucU, Fucose dissimilation pathway protein FucU Carbohydrate transport and metabolism 110644714 Pathogen - hypothetical protein ECP_4607 1 None None None 110644361 Common - 23S rRNA pseudouridine synthase F ECP_4240 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 110644663 Common - hemolysin-activating lysine-acyltransferase HlyC ECP_4556 15 COG2994 HlyC, ACP:hemolysin acyltransferase (hemolysin-activating protein) Posttranslational modification, protein turnover, chaperones 110644022 Common - hypothetical protein ECP_3880 12 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 110641113 Common - hypothetical protein YcaQ ECP_0927 61 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 110643996 Common - hypothetical protein ECP_3854 23 None None None 110644030 Common - heat shock protein IbpA ECP_3888 67 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 110642619 Common - ethanolamine utilization protein EutK precursor ECP_2459 5 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110641696 Common - hypothetical protein ECP_1518 29 COG2188 PhnF, Transcriptional regulators Transcription 110643476 Common - p-hydroxybenzoic acid efflux subunit AaeA ECP_3325 155 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110640330 Common pdhR transcriptional regulator PdhR ECP_0119 150 COG2186 FadR, Transcriptional regulators Transcription 110644165 Common - carbamate kinase ECP_4034 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 110642221 Common - hypothetical protein ECP_2051 22 COG2926 COG2926, Uncharacterized protein conserved in bacteria Function unknown 110644614 Common - hypothetical protein ECP_4504 23 COG3076 COG3076, Uncharacterized protein conserved in bacteria Function unknown 110641599 Common - protein YdcF ECP_1419 11 COG1434 COG1434, Uncharacterized conserved protein Function unknown 110644145 Common - hypothetical protein ECP_4014 48 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 110641792 Common - putative ferredoxin-like protein YdhX ECP_1618 165 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110643006 Common - diaminopimelate decarboxylase ECP_2851 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 110643726 Common - hypothetical protein YhiI precursor ECP_3579 133 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110641592 Pathogen - hypothetical protein ECP_1412 1 None None None 110642889 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ECP_2729 196 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 110642646 Common - hypothetical protein ECP_2486 11 None None None 110644598 Common nrdG anaerobic ribonucleotide reductase-activating protein ECP_4486 63 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 110640505 Common - F1C putative fimbrial adhesin precursor ECP_0299 5 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643501 Common - hypothetical protein ECP_3350 19 COG3924 COG3924, Predicted membrane protein Function unknown 110642113 Common - yersiniabactin biosynthetic protein ECP_1942 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110641684 Common - hypothetical protein YneF ECP_1506 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110644722 Common - putative Na+/H+ antiporter ECP_4615 49 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 110642883 Common - predicted outer membrane lipoprotein ECP_2723 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 110640642 Common ddl D-alanyl-alanine synthetase A ECP_0440 213 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 110642503 Common - hypothetical protein YfcD ECP_2338 24 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 110643291 Common - hypothetical protein ECP_3137 52 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 110642510 Common - histidine/lysine/arginine/ornithine transporter subunit ECP_2345 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 110643402 Common - tryptophan permease ECP_3249 31 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110642425 Common - outer membrane porin protein C ECP_2258 23 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110642148 Common - putative polyketide synthase ECP_1978 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110643705 Common - predicted methyltransferase ECP_3558 205 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 110643387 Common - putative tetrapyrrole methylase ECP_3234 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 110644118 Common - lipopolysaccharide biosynthesis protein WzxE ECP_3983 24 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 110643611 Common - hypothetical protein YhfT ECP_3462 11 COG3851 UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific Signal transduction mechanisms 110643725 Common - hypothetical ABC transporter ATP-binding protein YhiH ECP_3578 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 110643860 Common tdh L-threonine 3-dehydrogenase ECP_3717 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110641935 Common - PTS system, mannose-specific IIC component ECP_1761 37 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 110640613 Common prpD 2-methylcitrate dehydratase ECP_0409 65 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 110640225 Common - hypothetical protein ECP_0012 8 COG4735 COG4735, Uncharacterized protein conserved in bacteria Function unknown 110643645 Common - carboxylesterase BioH ECP_3498 139 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 110642583 Common - hypothetical protein YfdA ECP_2419 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110642575 Common - putative peptidase YpdF ECP_2411 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 110643710 Common - putative transposase ECP_3563 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642843 Common - formate hydrogenlyase complex iron-sulfur subunit ECP_2683 196 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 110641742 Common - DNA-binding transcriptional repressor ECP_1564 121 COG1609 PurR, Transcriptional regulators Transcription 110641216 Common - DNA-binding transcriptional activator in two-component regulatory system ECP_1032 145 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110643714 Common - hypothetical protein ECP_3567 11 None None None 110640645 Common - hypothetical protein ECP_0443 22 None None None 110641105 Common - 3-phosphoshikimate 1-carboxyvinyltransferase ECP_0919 228 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 110643746 Pathogen - hypothetical protein ECP_3599 2 None None None 110643242 Common - oxidoreductase ECP_3088 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110644688 Common - putative hemolysin activator HlyB ECP_4581 65 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 110641298 Common - probable membrane protein YmfA ECP_1116 2 None None None 110641371 Common - iron transport protein, inner membrane component ECP_1189 190 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 110643363 Common - threonine dehydratase ECP_3210 206 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 110643812 Common - xylulose kinase ECP_3667 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 110644607 Common pyrB aspartate carbamoyltransferase catalytic subunit ECP_4495 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 110643093 Common - hypothetical protein ECP_2938 26 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 110640894 Common - putative dihydrodipicolinate synthase protein ECP_0695 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 110642517 Common - colicin V production protein ECP_2352 103 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 110644218 Common - hypothetical protein YihT (putative tagatose 1,6-diphosphate aldolase) ECP_4089 26 COG3684 LacD, Tagatose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 110644139 Common - hypothetical protein ECP_4008 74 COG1912 COG1912, Uncharacterized conserved protein Function unknown 110642855 Common - putative molybdenum-pterin-binding protein ECP_2695 66 COG3585 MopI, Molybdopterin-binding protein Coenzyme metabolism 110642294 Common - putative cytoplasmic protein ECP_2124 5 None None None 110640922 Common - hypothetical protein YbgK ECP_0725 114 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 110644076 Common - F0F1 ATP synthase subunit delta ECP_3934 174 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 110644790 Common - methyl-accepting chemotaxis protein I ECP_4683 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 110643775 Common - C4-dicarboxylate transporter DctA ECP_3628 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 110640931 Common sdhD succinate dehydrogenase cytochrome b556 small membrane subunit ECP_0734 53 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 110640680 Common - putative oxidoreductase ECP_0478 205 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 110644797 Common - phosphoglycerol transferase I ECP_4690 46 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 110642252 Common - UTP--glucose-1-phosphate uridylyltransferase subunit GalF ECP_2082 230 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 110642159 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase ECP_1989 119 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 110643063 Common - chromosome replication initiation inhibitor protein ECP_2908 79 COG0583 LysR, Transcriptional regulator Transcription 110642560 Common - hypothetical protein ECP_2396 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 110643442 Common - putative ABC transporter ATP-binding protein YhbG ECP_3289 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 110641097 Common - hypothetical protein YcaC ECP_0911 77 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 110641516 Common - orotidine 5'-phosphate decarboxylase ECP_1334 165 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 110640658 Common - exonuclease subunit SbcC ECP_0456 104 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 110640447 Common - hypothetical hemolysin co-regulated protein ECP_0239 28 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 110644625 Common - gluconate 5-dehydrogenase ECP_4515 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110641222 Common - hypothetical protein ECP_1038 116 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 110641547 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YcjQ ECP_1365 119 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110640661 Common phoR phosphate regulon sensor protein ECP_0459 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 110644307 Common - DNA-binding transcriptional repressor FabR ECP_4180 41 COG1309 AcrR, Transcriptional regulator Transcription 110641527 Common - multidrug efflux protein ECP_1345 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110641641 Pathogen - hypothetical protein ECP_1463 1 None None None 110643129 Common - hypothetical transport activator ECP_2975 199 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110641291 Common - hypothetical protein ECP_1107 4 COG4763 COG4763, Predicted membrane protein Function unknown 110641786 Common - multidrug efflux protein ECP_1610 166 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 110643403 Common - ATP-dependent RNA helicase DeaD ECP_3250 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 110640985 Common moaA molybdenum cofactor biosynthesis protein A ECP_0795 202 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 110640437 Common - Clp ATPase ECP_0229 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 110644801 Common - hypothetical protein ECP_4694 34 COG3610 COG3610, Uncharacterized conserved protein Function unknown 110642996 Common - prolipoprotein diacylglyceryl transferase ECP_2841 205 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 110644344 Common - homoserine O-succinyltransferase ECP_4223 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 110643794 Pathogen - hypothetical protein ECP_3647 1 None None None 110644412 Common - putative xanthine/uracil permeases family protein YjcD ECP_4293 134 COG2252 COG2252, Permeases General function prediction only 110643946 Common - putative transposase ECP_3804 76 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643044 Common - hypothetical protein ECP_2889 11 None None None 110643023 Common - carbamate kinase ECP_2868 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 110644239 Common - rhamnulose-1-phosphate aldolase ECP_4112 22 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 110640299 Common murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase ECP_0088 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 110640694 Common - hypothetical protein ECP_0494 19 COG3056 COG3056, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 110640568 Common - putative lysR-family transcriptional regulator ECP_0363 175 COG0583 LysR, Transcriptional regulator Transcription 110644721 Common - putative aminotransferase ECP_4614 228 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 110643148 Pathogen - hypothetical protein ECP_2994 1 None None None 110641578 Common - C32 tRNA thiolase ECP_1398 164 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 110644302 Common - hypothetical transport protein YjjL ECP_4175 201 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110640217 Common - threonine synthase ECP_0004 163 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 110644576 Common - putative membrane protein YtfF ECP_4464 38 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 110640430 Common - DNA polymerase III subunit epsilon ECP_0221 183 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 110642909 Common - hypothetical sugar kinase YgcE ECP_2749 175 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 110643197 Common - hypothetical type II secretion protein ECP_3043 103 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110642448 Common glpA sn-glycerol-3-phosphate dehydrogenase subunit A ECP_2283 162 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 110642690 Common - ferredoxin, 2Fe-2S ECP_2530 102 COG0633 Fdx, Ferredoxin Energy production and conversion 110643347 Common - hypothetical protein YqjD ECP_3194 10 COG4575 ElaB, Uncharacterized conserved protein Function unknown 110642825 Common - sorbitol-6-phosphate dehydrogenase ECP_2665 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110642002 Common - methyl-accepting chemotaxis protein II ECP_1830 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 110641504 Common - predicted inner membrane peptidase ECP_1322 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110641275 Common - DNA polymerase III subunit delta' ECP_1091 183 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 110640609 Common - hypothetical protein ECP_0405 7 None None None 110643952 Common - putative CS12 fimbrial-like upstream regulatory protein ECP_3810 60 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110640999 Common - hypothetical protein ECP_0809 145 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110640354 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase ECP_0143 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 110644048 Common - putative inner membrane protein translocase component YidC ECP_3906 214 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 110643551 Common - 50S ribosomal protein L29 ECP_3400 95 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 110644550 Common ulaA ascorbate-specific PTS system enzyme IIC ECP_4438 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 110642809 Common - transcriptional repressor MprA ECP_2649 89 COG1846 MarR, Transcriptional regulators Transcription 110642864 Common - putative transposase ECP_2704 16 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644137 Common - predicted hydrolase ECP_4006 63 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 110641832 Common - predicted glutathione peroxidase ECP_1658 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 110642915 Common - hypothetical protein YgcF ECP_2755 162 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 110643857 Common - hypothetical protein ECP_3714 200 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 110642195 Common - transposase for insertion sequence IS100 ECP_2025 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640629 Common - putative glycosyl transferase ECP_0425 112 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110642983 Common - putative transcriptional antiterminator protein ECP_2828 29 COG3711 BglG, Transcriptional antiterminator Transcription 110640733 Common recR recombination protein RecR ECP_0533 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 110643303 Common - hypothetical protein ECP_3149 168 COG0344 COG0344, Predicted membrane protein Function unknown 110643170 Common - hypothetical protein YeeV ECP_3016 8 None None None 110643376 Common - N-acetylgalactosamine-specific PTS system transporter subunit IIB ECP_3223 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 110641474 Common - oligopeptide transport system permease protein OppC ECP_1292 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110644760 Common - FimF protein precursor ECP_4653 21 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643190 Common - polysialic acid transport protein KpsM ECP_3036 95 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 110640728 Common - primosomal replication protein N'' ECP_0528 14 COG3923 PriC, Primosomal replication protein N'' DNA replication, recombination, and repair 110640704 Common - hypothetical protein YbaW (thioesterase superfamily) ECP_0504 19 COG0824 FcbC, Predicted thioesterase General function prediction only 110642344 Common - hypothetical protein ECP_2174 24 None None None 110641450 Common - putative ACR involved in intracellular sulfur reduction ECP_1268 27 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 110644681 Common - hypothetical protein ECP_4574 22 None None None 110641034 Common - putative ABC transporter inner membrane component ECP_0846 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110643281 Common tolC outer membrane channel protein ECP_3127 137 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110640593 Common - transcriptional regulator BetI ECP_0388 64 COG1309 AcrR, Transcriptional regulator Transcription 110643904 Common - putative transcriptional antiterminator ECP_3761 30 COG3711 BglG, Transcriptional antiterminator Transcription 110642655 Common - putative permease PerM ECP_2495 136 COG0628 PerM, Predicted permease General function prediction only 110644600 Common - trehalose-6-phosphate hydrolase ECP_4488 167 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 110644635 Pathogen - hypothetical protein ECP_4528 1 None None None 110641842 Common - hypothetical protein ECP_1668 1 None None None 110642184 Common - hypothetical protein ECP_2014 4 None None None 110644812 Common - periplasmic protein ECP_4759 84 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 110643464 Common rpsI 30S ribosomal protein S9 ECP_3313 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 110642721 Common - tRNA-specific adenosine deaminase ECP_2561 217 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 110641895 Common - hypothetical protein YdjI (putative fructose/tagatose biphosphate aldolase ECP_1721 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110643510 Common - acriflavine resistance protein E precursor ECP_3359 151 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110641348 Common - terminase small subunit ECP_1166 9 COG4220 COG4220, Phage DNA packaging protein, Nu1 subunit of terminase DNA replication, recombination, and repair 110642836 Common - cellobiose/arbutin/salicin-specific PTS system components IIBC ECP_2676 48 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110644420 Common - acetyl-CoA synthetase ECP_4301 216 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 110640948 Common tolB translocation protein TolB ECP_0751 157 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 110642705 Common - hypothetical protein YphB (aldose 1-epimerase) ECP_2545 24 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 110642009 Common - universal stress protein UspC ECP_1837 31 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 110642303 Common - putative tagatose 6-phosphate kinase gatZ ECP_2133 34 COG4573 GatZ, Predicted tagatose 6-phosphate kinase Carbohydrate transport and metabolism 110640269 Common djlA Dna-J like membrane chaperone protein ECP_0058 69 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 110640515 Pathogen - hypothetical membrane protein ECP_0309 2 None None None 110640788 Common - predicted membrane-bound metal-dependent hydrolase ECP_0588 11 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 110644178 Common - DNA recombination protein RmuC ECP_4047 148 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 110640421 Common - D,D-heptose 1,7-bisphosphate phosphatase ECP_0210 131 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 110640521 Common - putative cobalamin synthesis protein ECP_0316 116 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 110644431 Common - putative transposase ECP_4312 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643268 Common - putative modulator of drug activity ECP_3114 48 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 110644742 Common - hypothetical protein ECP_4635 6 None None None 110644506 Common - elongation factor P ECP_4391 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 110641967 Common purT phosphoribosylglycinamide formyltransferase 2 ECP_1793 196 COG0027 PurT, Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) Nucleotide transport and metabolism 110640460 Common - putative glutamine amidotransferase ECP_0253 72 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 110640772 Common - allantoinase ECP_0572 211 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 110640306 Common - cell division protein FtsQ ECP_0095 73 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 110641085 Common aat leucyl/phenylalanyl-tRNA--protein transferase ECP_0899 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 110643576 Common - type 4 prepilin-like proteins leader peptide processing enzyme ECP_3425 90 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110643976 Common - putative transposase ECP_3834 134 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643141 Pathogen - hypothetical protein ECP_2987 1 None None None 110640911 Common - DNA-binding response regulator in two-component regulatory system with KdpD ECP_0712 211 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110641317 Common - truncated integrase ECP_1135 11 None None None 110641306 Common - sensor protein PhoQ ECP_1124 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110642305 Common - fructose-bisphosphate aldolase ECP_2135 57 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 110643334 Common - hypothetical protein YgjV ECP_3181 17 None None None 110642209 Common - hypothetical protein ECP_2039 5 None None None 110641079 Common - macrolide transporter subunit MacA ECP_0893 175 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110643538 Common rpmJ 50S ribosomal protein L36 ECP_3387 134 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 110644470 Common - sensor protein BasS/PmrB ECP_4355 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110642961 Common - putative CLPA/B-type chaperone protein ECP_2806 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 110641378 Pathogen - hypothetical protein ECP_1196 1 None None None 110641852 Common katE hydroperoxidase II ECP_1678 126 COG0753 KatE, Catalase Inorganic ion transport and metabolism 110642200 Pathogen - hypothetical protein ECP_2030 1 None None None 110641582 Common - outer membrane protein N precursor ECP_1402 31 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110644495 Common dipZ thiol:disulfide interchange protein precursor ECP_4380 119 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 110640324 Common - putative colicin ECP_0113 20 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 110642769 Common rimM 16S rRNA-processing protein ECP_2609 181 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 110642699 Common - hypothetical protein YfhR ECP_2539 102 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 110644338 Common - sensor protein ZraS ECP_4216 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110642263 Common - GDP-mannose 4,6-dehydratase ECP_2093 228 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 110641249 Common flgB flagellar basal body rod protein FlgB ECP_1065 99 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 110640585 Common - putative cytoplasmic protein ECP_0380 2 None None None 110643687 Common ggt gamma-glutamyltranspeptidase periplasmic precursor ECP_3540 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 110643634 Common hslO Hsp33-like chaperonin ECP_3487 138 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 110642629 Common - ethanolamine utilization protein EutM precursor ECP_2469 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110640565 Common rpmE2 50S ribosomal protein L31 type B ECP_0360 108 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 110641051 Common grxA glutaredoxin 1 ECP_0863 48 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 110643261 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase ECP_3107 89 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 110640240 Common - LytB protein ECP_0027 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 110640602 Common - YahF/FdrA-like protein ECP_0397 188 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 110640364 Common pcnB poly(A) polymerase I ECP_0153 211 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 110643321 Common ebgC cryptic beta-D-galactosidase subunit beta ECP_3168 9 COG2731 EbgC, Beta-galactosidase, beta subunit Carbohydrate transport and metabolism 110642031 Common fliS flagellar protein FliS ECP_1859 84 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 110641612 Common - tellurite resistance protein TehB ECP_1434 51 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 110641756 Common - endonuclease III ECP_1578 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 110643310 Common dnaG DNA primase ECP_3156 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 110644619 Common - leucyl aminopeptidase ECP_4509 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 110640262 Common - putative antitoxin of gyrase inhibiting toxin-antitoxin system ECP_0049 9 COG5302 COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid General function prediction only 110644585 Common - putative outer membrane protein ECP_4473 129 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 110644792 Common - C4-dicarboxylate transporter small subunit ECP_4685 31 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 110640440 Common - putative lipoprotein ECP_0232 12 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 110641327 Common - hypothetical protein ECP_1145 13 None None None 110641459 Common - respiratory nitrate reductase 1 gamma chain ECP_1277 58 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 110641123 Common - putative exported protein YcbK ECP_0937 63 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 110641009 Common - predicted iron outer membrane transporter ECP_0819 107 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 110643691 Common - glycerol-3-phosphate transporter membrane protein ECP_3544 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 110642676 Common engA GTP-binding protein EngA ECP_2516 229 COG1160 COG1160, Predicted GTPases General function prediction only 110641919 Common - leucine export protein LeuE ECP_1745 127 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 110640651 Pathogen - hypothetical protein ECP_0449 1 None None None 110643436 Common - putative sodium/calcium exchanger protein ECP_3283 98 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 110642506 Common - glutathione S-transferase ECP_2341 101 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110644652 Pathogen - hypothetical protein ECP_4545 2 None None None 110644011 Common - hypothetical protein ECP_3869 8 None None None 110640274 Common - L-arabinose isomerase ECP_0063 35 COG2160 AraA, L-arabinose isomerase Carbohydrate transport and metabolism 110643885 Common - hypothetical protein ECP_3742 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 110642735 Common - RNA polymerase sigma factor RpoE ECP_2575 175 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 110640718 Common - putative diguanylate phosphodiesterase ECP_0518 163 COG4943 COG4943, Predicted signal transduction protein containing sensor and EAL domains Signal transduction mechanisms 110642879 Common - hypothetical protein ECP_2719 78 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110642118 Common - pesticin receptor precursor ECP_1947 107 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 110641815 Common - hypothetical protein YdiF (putative acetyl-CoA:acetoacetyl-CoA transferase) ECP_1641 97 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 110642815 Common - predicted hydrolase ECP_2655 187 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 110641719 Pathogen - acid shock protein precursor ECP_1541 1 None None None 110641437 Common - ribose-phosphate pyrophosphokinase ECP_1255 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 110642014 Common - L-arabinose-binding periplasmic protein precursor ECP_1842 38 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110644747 Common - hypothetical protein ECP_4640 15 COG4930 COG4930, Predicted ATP-dependent Lon-type protease Posttranslational modification, protein turnover, chaperones 110643868 Common - lipopolysaccharide core biosynthesis protein ECP_3725 5 COG0661 AarF, Predicted unusual protein kinase General function prediction only 110642155 Common - putative transposase ECP_1985 56 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641585 Common - heat-inducible protein ECP_1405 12 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 110640464 Common - hypothetical protein ECP_0257 1 None None None 110641289 Common - hypothetical protein YcfS precursor ECP_1105 83 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 110641700 Common - dipeptidyl carboxypeptidase II ECP_1522 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 110644462 Common - PhnD protein ECP_4347 87 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 110641518 Common - lipoprotein ECP_1336 6 None None None 110642711 Common - hypothetical protein YphH ECP_2551 133 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110642453 Common - putative aldolase ECP_2288 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 110641603 Common - hypothetical protein ECP_1423 5 None None None 110641036 Common - hypothetical membrane protein YliF ECP_0848 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110641513 Common - phosphatidylglycerophosphatase B ECP_1331 31 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 110641709 Common - hypothetical protein YnfB precursor ECP_1531 11 None None None 110644268 Common - ATP-dependent protease peptidase subunit ECP_4141 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 110644676 Pathogen - hypothetical protein ECP_4569 1 None None None 110642516 Common - amidophosphoribosyltransferase ECP_2351 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 110643179 Common - hypothetical protein ECP_3025 6 None None None 110641717 Common - hypothetical transcriptional regulator YnfL ECP_1539 192 COG0583 LysR, Transcriptional regulator Transcription 110640892 Common - hypothetical membrane protein ECP_0693 28 COG4692 COG4692, Predicted neuraminidase (sialidase) Carbohydrate transport and metabolism 110641293 Common - outer membrane-specific lipoprotein transporter subunit LolC ECP_1109 155 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 110642143 Common - probable peptide synthetase protein ECP_1973 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110640428 Common - hypothetical protein YafS ECP_0219 55 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110641569 Common - O-6-alkylguanine-DNA:cysteine-protein methyltransferase ECP_1389 198 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 110644089 Common - high affinity ribose transport protein RbsD ECP_3947 44 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 110640597 Common - hypothetical transcriptional regulator YahB ECP_0392 154 COG0583 LysR, Transcriptional regulator Transcription 110642404 Common - thiol:disulfide interchange protein DsbE ECP_2235 100 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 110640992 Common - hypothetical protein ECP_0802 56 COG0392 COG0392, Predicted integral membrane protein Function unknown 110644079 Common - F0F1 ATP synthase subunit A ECP_3937 206 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 110641522 Common - exoribonuclease II ECP_1340 192 COG4776 Rnb, Exoribonuclease II Transcription 110642748 Common - hypothetical protein ECP_2588 11 COG5544 COG5544, Predicted periplasmic lipoprotein General function prediction only 110643383 Common - N-acetylgalactosamine-specific PTS system transporter subunit IIB ECP_3230 38 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 110641235 Common solA N-methyltryptophan oxidase ECP_1051 51 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 110643443 Common - RNA polymerase factor sigma-54 ECP_3290 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 110641648 Common - respiratory nitrate reductase 2 a chain ECP_1470 104 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 110644633 Common - hypothetical protein ECP_4526 4 None None None 110643678 Common - gluconate transporter, low affinity GNT 1 system ECP_3531 77 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110641971 Common - DNA-binding transcriptional regulator HexR ECP_1797 99 COG1737 RpiR, Transcriptional regulators Transcription 110642249 Common - putative glycosyltransferase ECP_2079 166 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110641844 Common - 6-phosphofructokinase 2 ECP_1670 143 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 110640634 Common - delta-aminolevulinic acid dehydratase ECP_0432 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 110644469 Common - proline/glycine betaine transporter ECP_4354 163 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642591 Common - hypothetical protein ECP_2431 8 None None None 110642683 Common ndk nucleoside diphosphate kinase ECP_2523 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 110642066 Common - DNA cytosine methylase ECP_1894 122 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 110640839 Common - putative universal stress protein ECP_0640 68 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 110641181 Common - insertion element (orfA) ECP_0997 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644569 Common - putative endonuclease ECP_4457 31 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 110641493 Common - bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase ECP_1311 229 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 110642475 Common - hypothetical protein ECP_2310 8 COG4575 ElaB, Uncharacterized conserved protein Function unknown 110644836 Common - hypothetical protein ECP_4783 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 110644070 Common - D-fructose-6-phosphate amidotransferase ECP_3928 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 110640222 Common - transaldolase B ECP_0009 185 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 110642834 Pathogen - hypothetical protein ECP_2674 2 None None None 110640957 Common galM aldose 1-epimerase ECP_0767 96 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 110640376 Common - chloride channel protein ECP_0165 153 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 110642199 Pathogen - hypothetical protein ECP_2029 1 None None None 110643898 Common - hypothetical protein YajF (ROK family protein) ECP_3755 116 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110643246 Common - hypothetical protein ECP_3092 95 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 110640535 Pathogen - hypothetical protein ECP_0330 1 None None None 110644106 Common - ATP-dependent DNA helicase Rep ECP_3969 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 110642273 Common - hypothetical protein ECP_2103 219 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 110643167 Common - putative radC-like protein YeeS ECP_3013 173 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 110641262 Common - 23S rRNA pseudouridylate synthase C ECP_1078 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 110643150 Common - transposase/IS protein ECP_2996 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110643405 Common - polynucleotide phosphorylase/polyadenylase ECP_3252 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 110641427 Common treA trehalase ECP_1245 27 COG1626 TreA, Neutral trehalase Carbohydrate transport and metabolism 110641460 Common - putative transposase ECP_1278 20 None None None 110641587 Common - hypothetical protein ECP_1407 15 None None None 110640402 Common rnhB ribonuclease HII ECP_0191 239 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 110641070 Common - hypothetical protein YbjT ECP_0884 128 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110642627 Common - ethanolamine utilization protein EutE ECP_2467 166 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110643297 Common - glutamate-ammonia-ligase adenylyltransferase ECP_3143 54 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 110643117 Common - hypothetical protein ECP_2963 8 None None None 110641605 Common - putative transcriptional regulators, LysR family ECP_1427 192 COG0583 LysR, Transcriptional regulator Transcription 110641413 Common - hypothetical protein ECP_1231 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 110642787 Common - DNA-binding transcriptional regulator CsiR ECP_2627 117 COG1802 GntR, Transcriptional regulators Transcription 110640831 Common - hypothetical oxidoreductase YbdH ECP_0632 74 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 110642468 Common - polymyxin B resistance protein pmrD ECP_2303 4 None None None 110640889 Common nagB glucosamine-6-phosphate deaminase ECP_0690 81 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 110641088 Common - thioredoxin reductase ECP_0902 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 110641712 Common - hypothetical protein YnfD precursor ECP_1534 11 None None None 110641987 Common - hypothetical protein YecN ECP_1813 30 COG3788 COG3788, Uncharacterized relative of glutathione S-transferase, MAPEG superfamily General function prediction only 110640453 Common - H repeat-associated protein of Rhs element ECP_0246 22 COG5433 COG5433, Transposase DNA replication, recombination, and repair 110642022 Common - tyrosine-specific transport protein ECP_1850 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110642958 Common - hypothetical protein ECP_2803 31 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 110642508 Common - hypothetical protein YfcH ECP_2343 126 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 110641655 Common - formate dehydrogenase-N subunit gamma ECP_1477 61 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 110640976 Common - predicted kinase inhibitor ECP_0786 126 COG1881 COG1881, Phospholipid-binding protein General function prediction only 110642467 Common - hypothetical protein ECP_2302 6 None None None 110642553 Common - sucrose operon repressor ECP_2389 125 COG1609 PurR, Transcriptional regulators Transcription 110644806 Common - hypothetical protein YjjZ ECP_4699 9 None None None 110640498 Pathogen - major pilu subunit operon regulatory protein PapB ECP_0292 3 None None None 110640954 Common - hypothetical protein ECP_0764 6 None None None 110643917 Common - hypothetical protein ECP_3775 58 None None None 110643948 Common - putative transposase ECP_3806 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640474 Common - xanthine-guanine phosphoribosyltransferase ECP_0267 65 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 110643186 Pathogen - hypothetical protein ECP_3032 2 None None None 110644088 Common trkD potassium transport protein Kup ECP_3946 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 110641188 Common - putative cytoplasmic protein ECP_1004 12 None None None 110641595 Common - hypothetical protein YnbC ECP_1415 71 COG2267 PldB, Lysophospholipase Lipid metabolism 110642233 Common hisD histidinol dehydrogenase ECP_2063 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 110642211 Pathogen - hypothetical protein ECP_2041 2 None None None 110644518 Common - predicted mechanosensitive channel ECP_4403 184 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110644821 Common deoD purine nucleoside phosphorylase ECP_4768 95 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 110644781 Common - hypothetical protein ECP_4674 72 COG1479 COG1479, Uncharacterized conserved protein Function unknown 110640502 Common - F1C fimbrial usher ECP_0296 38 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110640675 Common ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ECP_0473 231 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 110641689 Common - sugar efflux transporter ECP_1511 147 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644153 Common - LysR-family transcriptional regulatory protein ECP_4022 165 COG0583 LysR, Transcriptional regulator Transcription 110641457 Common - respiratory nitrate reductase 1 beta chain ECP_1275 148 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 110643434 Common - hypothetical protein ECP_3281 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 110644181 Common ubiB putative ubiquinone biosynthesis protein UbiB ECP_4050 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 110643536 Common - 30S ribosomal protein S11 ECP_3385 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 110640600 Common - ankyrin-repeats protein ECP_0395 81 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 110643201 Common - putative type II secretion protein GspC ECP_3047 21 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 110644705 Common - hypothetical protein ECP_4598 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110640983 Common - excinuclease ABC subunit B ECP_0793 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 110643036 Common - putative purine permease YgfU ECP_2881 130 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 110640790 Common - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase ECP_0590 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 110641552 Common - hypothetical ABC transporter ECP_1370 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 110644767 Common - DNA-binding transcriptional repressor ECP_4660 137 COG2186 FadR, Transcriptional regulators Transcription 110640960 Common - UDP-galactose-4-epimerase ECP_0770 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 110643357 Common - hypothetical protein ECP_3204 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110641060 Common - putative membrane protein YbjO ECP_0872 9 None None None 110642190 Common - putative regulatory protein ECP_2020 7 COG3311 AlpA, Predicted transcriptional regulator Transcription 110644762 Common - FimH protein precursor ECP_4655 6 None None None 110640409 Common - hypothetical protein ECP_0198 12 None None None 110643288 Common - zinc transporter ZupT ECP_3134 97 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 110641017 Common - threonine and homoserine efflux system ECP_0827 76 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 110644325 Common thiG thiazole synthase ECP_4203 167 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 110644223 Common - phosphatase ECP_4094 72 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 110643891 Common - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase ECP_3748 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 110641167 Common - cytochrome BD-II oxidase subunit I ECP_0983 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 110641103 Common - putative membrane protein YcaP ECP_0917 69 COG2323 COG2323, Predicted membrane protein Function unknown 110641154 Common - hypothetical protein ECP_0970 19 COG3110 COG3110, Uncharacterized protein conserved in bacteria Function unknown 110644419 Common - putative membrane protein YjcH ECP_4300 44 COG3162 COG3162, Predicted membrane protein Function unknown 110643881 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase ECP_3738 181 COG0756 Dut, dUTPase Nucleotide transport and metabolism 110641540 Common - DNA-binding transcriptional activator ECP_1358 28 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 110643046 Common - hypothetical protein ECP_2891 2 None None None 110640293 Common - DNA-binding transcriptional regulator FruR ECP_0082 122 COG1609 PurR, Transcriptional regulators Transcription 110644129 Pathogen - hypothetical protein ECP_3998 1 None None None 110640411 Common - hypothetical protein ECP_0200 114 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 110644276 Common metL bifunctional aspartate kinase II/homoserine dehydrogenase II ECP_4149 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 110643852 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase ECP_3709 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 110644244 Common - L-rhamnose-proton symport ECP_4117 14 None None None 110641673 Common - transcriptional regulator YdeO ECP_1495 22 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110644005 Pathogen - hypothetical protein ECP_3863 4 COG3943 COG3943, Virulence protein General function prediction only 110643215 Common - hypothetical protein ECP_3061 164 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110641197 Common putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase ECP_1013 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 110644690 Pathogen - hypothetical protein ECP_4583 1 None None None 110644739 Common - hypothetical protein YeeT ECP_4632 4 None None None 110640941 Common - cytochrome D ubiquinol oxidase subunit II ECP_0744 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 110641230 Common - drug efflux system protein MdtG ECP_1046 127 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641774 Common - ribonuclease T ECP_1598 59 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 110643806 Common glyS glycyl-tRNA synthetase subunit beta ECP_3661 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 110643683 Common - putative acetyltransferase YhhY ECP_3536 77 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 110644155 Pathogen - hypothetical protein ECP_4024 4 None None None 110641330 Common - bacteriophage regulatory protein CII ECP_1148 4 None None None 110641958 Common - hypothetical protein YebZ (putative copper resistance protein D) ECP_1784 42 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 110640936 Common sucC succinyl-CoA synthetase subunit beta ECP_0739 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 110642780 Common smpB SsrA-binding protein ECP_2620 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 110641390 Common - part of hypothetical protein b1169 (putative adhesin) ECP_1208 2 None None None 110641822 Common - short chain acyl-CoA synthetase ECP_1648 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110642701 Common - putative 3-phenylpropionic acid transporter ECP_2541 75 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641056 Common - putrescine transporter subunit: periplasmic-binding component of ABC superfamily ECP_0868 131 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 110644509 Common - quaternary ammonium compound-resistance protein SugE ECP_4394 122 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110644402 Common aphA acid phosphatase/phosphotransferase ECP_4283 12 COG3700 AphA, Acid phosphatase (class B) General function prediction only 110643565 Common - probable general secretion pathway protein E ECP_3414 218 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 110642242 Common - 6-phosphogluconate dehydrogenase ECP_2072 187 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 110642497 Common - putative phosphatase ECP_2332 148 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 110642857 Common - hypothetical protein ECP_2697 1 None None None 110644288 Common - phosphoenolpyruvate-protein phosphotransferase PtsA ECP_4161 233 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 110641658 Common - alcohol dehydrogenase ECP_1480 212 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 110644058 Common - predicted inner membrane protein ECP_3916 4 None None None 110644252 Common - 6-phosphofructokinase ECP_4125 160 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 110643586 Common - hypothetical protein ECP_3435 43 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 110643414 Common - hypothetical membrane protein ECP_3261 4 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110641949 Common - putative solute/DNA competence effector ECP_1775 35 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 110644500 Common - inner membrane protein YjeH ECP_4385 85 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110640312 Common - nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP ECP_0101 157 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 110644111 Common - lipopolysaccharide biosynthesis protein WzzE ECP_3976 16 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 110640588 Pathogen - hypothetical protein ECP_0383 1 None None None 110640777 Common - putative malate/L-lactate dehydrogenase ECP_0577 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 110643411 Common - hypothetical protein ECP_3258 181 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 110644167 Common - YahF/FdrA-like protein ECP_4036 113 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 110644169 Common - hypothetical isochorismatase family protein YcdL ECP_4038 81 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 110642312 Common - hydroxyethylthiazole kinase ECP_2142 77 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 110642796 Common - putative regulatory protein, GntR family ECP_2636 178 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 110640286 Common - 3-isopropylmalate dehydrogenase ECP_0075 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 110643154 Common - putative regulatory protein ECP_3000 10 COG3311 AlpA, Predicted transcriptional regulator Transcription 110641752 Common - electron transport complex protein RnfC ECP_1574 78 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 110644695 Pathogen - hypothetical protein ECP_4588 1 None None None 110643455 Common - hypothetical protein YhcH ECP_3304 29 COG2731 EbgC, Beta-galactosidase, beta subunit Carbohydrate transport and metabolism 110643208 Common - hypothetical protein ECP_3054 66 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 110641764 Common - transcriptional regulator SlyA ECP_1588 124 COG1846 MarR, Transcriptional regulators Transcription 110642537 Common - hypothetical fimbrial-like protein YfcP precursor ECP_2372 8 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110644143 Pathogen - hypothetical protein ECP_4012 6 None None None 110644373 Common malE maltose ABC transporter periplasmic protein ECP_4252 97 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 110644752 Pathogen - hypothetical protein ECP_4645 1 None None None 110641013 Common glnQ glutamine ABC transporter ATP-binding protein ECP_0823 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 110641877 Common - putative thiosulfate sulfurtransferase ECP_1703 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 110642203 Common - putative ABC transporter ECP_2033 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 110644532 Common - FtsH protease regulator HflC ECP_4420 153 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 110644053 Common - DNA-binding transcriptional regulator YidZ ECP_3911 84 COG0583 LysR, Transcriptional regulator Transcription 110641442 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase ECP_1260 213 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 110644069 Common - phosphate transporter subunit ECP_3927 139 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 110644120 Common - putative enterobacterial common antigen polymerase ECP_3985 13 None None None 110641415 Common dadX alanine racemase ECP_1233 199 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 110644259 Common - universal stress protein UspD ECP_4132 24 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 110644578 Common - putative transcriptional regulator YtfH ECP_4466 139 COG1733 COG1733, Predicted transcriptional regulators Transcription 110644405 Common uvrA excinuclease ABC subunit A ECP_4286 240 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 110642268 Common - putative colanic acid biosynthesis acetyltransferase WcaB ECP_2098 196 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 110640901 Common - hypothetical lipoprotein YbfN precursor ECP_0702 8 None None None 110640647 Common - pyrroline-5-carboxylate reductase ECP_0445 215 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 110640352 Common - putative transposase, YhgA-like ECP_0141 2 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110641615 Common - hypothetical protein YdcN (putative DNA-binding protein) ECP_1437 105 COG1396 HipB, Predicted transcriptional regulators Transcription 110643875 Common coaD phosphopantetheine adenylyltransferase ECP_3732 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 110643279 Common - hypothetical protein YqiB ECP_3125 26 COG3151 COG3151, Uncharacterized protein conserved in bacteria Function unknown 110643139 Common - hypothetical protein ECP_2985 6 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 110643943 Pathogen - hypothetical protein ECP_3801 1 None None None 110641024 Common - hypothetical ABC transporter ATP-binding protein YbiT ECP_0834 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 110640738 Common - inosine-guanosine kinase ECP_0538 56 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110641258 Common flgK flagellar hook-associated protein FlgK ECP_1074 125 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 110644668 Common - hypothetical membrane protein ECP_4561 24 COG4117 COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Energy production and conversion 110642625 Common - ethanolamine utilization protein EutG ECP_2465 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 110642803 Common - glycine betaine transporter ATP-binding subunit ECP_2643 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 110642084 Pathogen - putative type IV pilin protein precursor ECP_1912 2 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 110642349 Common - tRNA-dihydrouridine synthase C ECP_2179 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 110644734 Common - hypothetical protein ECP_4627 8 COG2378 COG2378, Predicted transcriptional regulator Transcription 110641174 Common - putative electron transport protein YccM ECP_0990 100 COG0348 NapH, Polyferredoxin Energy production and conversion 110641115 Common - 3-deoxy-manno-octulosonate cytidylyltransferase ECP_0929 139 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 110644319 Common rplA 50S ribosomal protein L1 ECP_4197 238 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 110641319 Pathogen - hypothetical protein ECP_1137 2 None None None 110641960 Common - DNA polymerase III subunit theta ECP_1786 12 None None None 110644646 Common - outer membrane usher protein PapC precursor ECP_4539 28 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110642821 Common - membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan ECP_2661 107 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 110641545 Common - binding-protein-dependent transport system inner membrane component ECP_1363 151 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 110640574 Common - putative aldo/keto reductase ECP_0369 170 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 110644480 Common - anaerobic C4-dicarboxylate transporter ECP_4365 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 110641669 Common - hypothetical protein YddB ECP_1491 16 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 110643910 Common - hypothetical protein ECP_3768 10 COG3440 COG3440, Predicted restriction endonuclease Defense mechanisms 110640555 Common - putative integral membrane protein ECP_0350 16 COG3477 COG3477, Predicted periplasmic/secreted protein Function unknown 110641803 Common sufC cysteine desulfurase ATPase component ECP_1629 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 110640664 Common - maltodextrin glucosidase ECP_0462 159 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 110643549 Common rplN 50S ribosomal protein L14 ECP_3398 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 110644523 Common - putative electron transport protein YjeS ECP_4411 138 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 110640867 Common - phosphoglycerate mutase, putative ECP_0668 171 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 110641138 Common - ABC transporter ATPase component ECP_0954 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 110641670 Common - hypothetical ABC transporter ATP-binding protein YddA ECP_1492 198 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 110642432 Common - short-chain fatty acids transporter ECP_2267 39 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 110643920 Pathogen - hypothetical protein ECP_3778 1 None None None 110644175 Common - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase ECP_4044 124 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 162138276 Common - GspL-like protein ECP_3038 12 COG3297 PulL, Type II secretory pathway, component PulL Intracellular trafficking and secretion 110644554 Common - L-xylulose 5-phosphate 3-epimerase ECP_4442 39 COG3623 SgaU, Putative L-xylulose-5-phosphate 3-epimerase Carbohydrate transport and metabolism 110643309 Common rpsU 30S ribosomal protein S21 ECP_3155 153 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 110643195 Common - hypothetical type II secretion protein GspI ECP_3041 16 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110642322 Common metG methionyl-tRNA synthetase ECP_2152 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110643662 Common - putative fimbrial adhesin precursor ECP_3515 5 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110642953 Common - hypothetical protein YgdL ECP_2795 219 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 110640766 Common - ureidoglycolate hydrolase ECP_0566 35 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 110641888 Common - protease 4 ECP_1714 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110641479 Common - hypothetical protein ECP_1297 6 None None None 110640825 Common entE enterobactin synthase subunit E ECP_0626 222 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 110642828 Common gutQ D-arabinose 5-phosphate isomerase ECP_2668 151 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 110640742 Pathogen - hypothetical protein ECP_0542 1 None None None 110642964 Common - hypothetical protein ECP_2809 6 None None None 110643624 Common - predicted fimbrial transporter ECP_3477 142 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 110641483 Common - predicted hydrolase ECP_1301 130 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 110642132 Common - bacteriophage integrase ECP_1962 102 COG0582 XerC, Integrase DNA replication, recombination, and repair 110642284 Common - multidrug efflux system subunit MdtA ECP_2114 171 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110644332 Common hemE uroporphyrinogen decarboxylase ECP_4210 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 110641339 Common - outer membrane porin protein LC precursor ECP_1157 31 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110641091 Common lolA outer-membrane lipoprotein carrier protein ECP_0905 66 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 110641430 Common - dihydroxyacetone kinase subunit DhaK ECP_1248 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 110642007 Common - transcriptional activator FlhC ECP_1835 27 None None None 110640724 Common - acriflavin resistance protein A ECP_0524 143 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110640857 Common - lipoyl synthase ECP_0658 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 110640491 Common - ABC transporter ATP-binding protein ECP_0285 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 110641022 Common - hypothetical protein ECP_0832 75 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110640486 Pathogen - hypothetical protein ECP_0280 1 None None None 110641204 Common - hypothetical protein ECP_1020 2 None None None 110643232 Common - hydrogenase 2-specific chaperone ECP_3078 22 None None None 110642758 Common - predicted lipoprotein ECP_2598 127 COG4105 ComL, DNA uptake lipoprotein General function prediction only 110643983 Common - putative transposase ECP_3841 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642073 Common - putative sensor-like histidine kinase YedV ECP_1901 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110641480 Common - voltage-gated potassium channel ECP_1298 109 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 110640231 Common - putative secreted sulfatase ECP_0018 95 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 110643524 Common - hypothetical protein ECP_3373 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 110640913 Common - potassium-transporting ATPase subunit B ECP_0716 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 110644840 Common - DNA-binding response regulator in two-component regulatory system with ArcB or CpxA ECP_4787 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110640799 Common nfrB bacteriophage N4 adsorption protein B ECP_0600 29 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110642101 Common - hypothetical protein ECP_1929 4 None None None 110642649 Common - hypothetical protein YpfJ ECP_2489 87 COG2321 COG2321, Predicted metalloprotease General function prediction only 110641256 Common flgI flagellar basal body P-ring protein ECP_1072 104 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 110640254 Common - putative electron transfer flavoprotein FixA ECP_0041 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 110644440 Common - predicted membrane fusion protein of efflux pump ECP_4323 145 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110641310 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase ECP_1128 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 110644775 Common - hypothetical protein YjiJ ECP_4668 59 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641824 Common - hypothetical protein ECP_1650 1 None None None 110642774 Common - heat shock protein GrpE ECP_2614 231 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 110644686 Common - hypothetical protein ECP_4579 2 None None None 110641000 Common - putative DNA-binding transcriptional regulator ECP_0810 20 COG1309 AcrR, Transcriptional regulator Transcription 110641463 Common - hypothetical protein ECP_1281 127 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 110643814 Common xylF D-xylose transporter subunit XylF ECP_3669 105 COG4213 XylF, ABC-type xylose transport system, periplasmic component Carbohydrate transport and metabolism 110642292 Common - hypothetical protein ECP_2122 6 None None None 110644216 Common - hypothetical sugar kinase YihV ECP_4087 149 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110640774 Common - glycerate kinase II ECP_0574 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 110642250 Pathogen - hypothetical antigen polymerase ECP_2080 1 None None None 110643761 Common - hypothetical transcriptional regulator YhiW ECP_3614 44 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110643108 Common - hypothetical protein ECP_2953 25 COG3171 COG3171, Uncharacterized protein conserved in bacteria Function unknown 110640541 Common - hypothetical protein YeeT ECP_0336 4 None None None 110641787 Common - hypothetical protein ECP_1611 19 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110642103 Pathogen - hypothetical protein ECP_1931 1 None None None 110643332 Common - hypothetical protein YgjT (integral membrane protein TerC family) ECP_3179 103 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 110643365 Common - DNA-binding transcriptional activator TdcR ECP_3212 2 None None None 110642385 Common - hypothetical protein YeiU ECP_2215 15 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 110644388 Pathogen - hypothetical protein ECP_4269 1 None None None 110643449 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase ECP_3296 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 110643380 Common - putative N-acetylgalctosamine-6-phosphate deacetylase ECP_3227 119 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 110644296 Common - phosphoenolpyruvate carboxylase ECP_4169 117 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 110641229 Common - hypothetical protein ECP_1045 7 None None None 110641389 Common - part of hypothetical protein b1169 ECP_1207 1 None None None 110643785 Common - hypothetical protein YhjU ECP_3638 18 None None None 110644391 Common - hypothetical protein ECP_4272 33 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 110644612 Common - arginine deiminase ECP_4500 52 COG2235 ArcA, Arginine deiminase Amino acid transport and metabolism 110642068 Common - hypothetical protein YedR (putative membrane protein) ECP_1896 3 None None None 110640657 Common - protein AraJ ECP_0455 159 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642637 Common - transketolase ECP_2477 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 110643095 Common - hypothetical protein ECP_2940 193 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 110641857 Common - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC ECP_1683 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 110642938 Common - serine transporter ECP_2778 37 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110644032 Common - hypothetical protein ECP_3890 12 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 110643647 Common - predicted gluconate transport-associated protein ECP_3500 74 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 110643234 Common - hydrogenase 2 large subunit ECP_3080 108 COG0374 HyaB, Ni,Fe-hydrogenase I large subunit Energy production and conversion 110641887 Common - hypothetical protein YdjA (putative nitroreductase) ECP_1713 81 COG0778 NfnB, Nitroreductase Energy production and conversion 110642588 Common - hypothetical protein ECP_2428 7 COG4317 COG4317, Uncharacterized protein conserved in bacteria Function unknown 110642585 Common - hypothetical protein YfdD ECP_2421 6 None None None 110643712 Common - cell developmental protein SirA ECP_3565 102 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 110641214 Common - curli assembly protein CsgF ECP_1030 9 None None None 110641584 Common - hypothetical protein YdbJ precursor ECP_1404 10 COG3042 Hlx, Putative hemolysin General function prediction only 110644024 Common - hypothetical protein ECP_3882 19 COG2149 COG2149, Predicted membrane protein Function unknown 110642689 Common - hypothetical protein ECP_2529 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 110640611 Common prpB 2-methylisocitrate lyase ECP_0407 135 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 110642408 Common - cytochrome c-type biogenesis protein CcmB ECP_2241 81 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 110640933 Common sdhB succinate dehydrogenase iron-sulfur subunit ECP_0736 202 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 110640920 Common - putative hydrolase-oxidase ECP_0723 99 COG0327 COG0327, Uncharacterized conserved protein Function unknown 110642033 Common - cytoplasmic alpha-amylase ECP_1861 48 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 110644013 Common - cryptic adenine deaminase ECP_3871 69 COG1001 AdeC, Adenine deaminase Nucleotide transport and metabolism 162138283 Common - hypothetical protein ECP_0145 2 None None None 110641202 Common - hypothetical protein YcdB precursor ECP_1018 39 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 110644197 Common - hypothetical protein YihD ECP_4068 18 COG3084 COG3084, Uncharacterized protein conserved in bacteria Function unknown 110643685 Common - hypothetical protein YrhA ECP_3538 2 None None None 110642137 Common - non-ribosomal peptide synthetase ECP_1967 215 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110640689 Common - cytochrome o ubiquinol oxidase subunit IV ECP_0489 61 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 110642868 Pathogen - hypothetical protein ECP_2708 1 None None None 110641557 Common - hypothetical protein ECP_1375 42 COG3768 COG3768, Predicted membrane protein Function unknown 110642365 Common - ferric iron-catecholate outer membrane transporter ECP_2195 131 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110641928 Common - hypothetical protein ECP_1754 16 COG3140 COG3140, Uncharacterized protein conserved in bacteria Function unknown 110640571 Common - putative aldo/keto reductase family ECP_0366 187 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 110640547 Common - phage integrase ECP_0342 101 COG0582 XerC, Integrase DNA replication, recombination, and repair 110642866 Common - putative transposase protein ECP_2706 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643016 Common - xanthine dehydrogenase subunit XdhB ECP_2861 100 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 110643514 Common - putative amino-acid ABC transporter binding protein YhdW precursor ECP_3363 120 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 110643659 Common - hypothetical membrane protein ECP_3512 2 None None None 110644395 Common - putative pyridine nucleotide-disulphide oxidoreductase ECP_4276 240 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 110644350 Pathogen - hypothetical protein ECP_4229 1 None None None 110642651 Common - lipoprotein ECP_2491 21 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 110641921 Common - ribonuclease D ECP_1747 119 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 110643773 Common - 2-dehydro-3-deoxygluconokinase ECP_3626 146 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110643349 Common - hypothetical protein YqjK ECP_3196 9 None None None 110643466 Common - putative ATPase ECP_3315 103 COG1485 COG1485, Predicted ATPase General function prediction only 110640439 Common - hypothetical protein ECP_0231 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 110640686 Common - nucleotide-binding protein ECP_0486 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 110644381 Common - DNA-damage-inducible SOS response protein ECP_4262 88 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 110642602 Common pdxK pyridoxal kinase ECP_2442 112 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 110640990 Common - hypothetical protein ECP_0800 124 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 110641125 Common - aromatic amino acid aminotransferase ECP_0939 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 110642382 Common - elongation factor P ECP_2212 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 110643207 Common - malate synthase G ECP_3053 74 COG2225 AceB, Malate synthase Energy production and conversion 110644379 Common - diacylglycerol kinase ECP_4260 92 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 110640709 Common - putative multidrug transporter membrane\ATP-binding components ECP_0509 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 110640336 Common - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase ECP_0125 211 COG1049 AcnB, Aconitase B Energy production and conversion 110642737 Common - hypothetical protein YfiC ECP_2577 26 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 110642127 Common - hypothetical protein ECP_1956 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 110641728 Common - short chain dehydrogenase ECP_1550 144 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110643522 Common - putative DNA topoisomerase ECP_3371 137 COG0551 TopA, Zn-finger domain associated with topoisomerase type I DNA replication, recombination, and repair 110643440 Common - hypothetical protein ECP_3287 25 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 110641424 Common - iron ABC transporter, ATP-binding protein ECP_1242 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 110643931 Pathogen - hypothetical protein ECP_3789 2 None None None 110641529 Common - probable drug transport transmembrane protein ECP_1347 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110640748 Common - copper-transporting P-type ATPase ECP_0548 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 110644346 Common - Isocitrate lyase ECP_4225 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 110640349 Common - YadE protein, polysaccharide deacetylase ECP_0138 89 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 110644092 Common - ribokinase ECP_3952 199 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110640841 Common - ribonuclease I ECP_0642 31 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 110643009 Common - arabinose-proton symporter ECP_2854 179 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643256 Common - putative malate/L-lactate dehydrogenase ECP_3102 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 110643352 Common - hypothetical protein YhaH ECP_3199 70 COG3152 COG3152, Predicted membrane protein Function unknown 110641287 Common - putative TetR-family regulatory protein ECP_1103 102 COG1309 AcrR, Transcriptional regulator Transcription 110642240 Common - chain length determinant protein ECP_2070 15 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 110641905 Common - hypothetical protein YeaG (putative serine kinases) ECP_1731 71 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 110643730 Common - low-affinity inorganic phosphate transporter 1 ECP_3583 150 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 110643926 Common - putative F17-like fimbrial chaperone ECP_3784 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110640249 Common - carnitinyl-CoA dehydratase ECP_0036 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 110641520 Common - hypothetical protein ECP_1338 6 None None None 110644589 Common - ABC transporter periplasmic binding protein YtfQ precursor ECP_4477 105 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110643122 Pathogen - PixJ protein ECP_2968 1 None None None 110640806 Common - phenylalanine transporter ECP_0607 161 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110642024 Common - phosphatidylglycerophosphate synthetase ECP_1852 203 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 110643650 Common - maltodextrin phosphorylase ECP_3503 129 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 110643843 Common - putative cytoplasmic protein ECP_3700 5 None None None 110643825 Common - hypothetical protein YiaL ECP_3680 29 COG2731 EbgC, Beta-galactosidase, beta subunit Carbohydrate transport and metabolism 110641300 Common potC spermidine/putrescine ABC transporter membrane protein ECP_1118 217 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 110642370 Common - predicted kinase ECP_2200 127 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110641534 Common - peptide transport periplasmic protein SapA precursor ECP_1352 202 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 110642644 Common - hypothetical protein ECP_2484 105 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 110642926 Common rumA 23S rRNA 5-methyluridine methyltransferase ECP_2766 202 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 110642259 Common - mannose-1-phosphate guanylyltransferase ECP_2089 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 110641357 Pathogen - minor tail protein Z ECP_1175 4 None None None 110644358 Common - PTS system, sorbose-specific IIA component ECP_4237 34 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 110644364 Common pgi glucose-6-phosphate isomerase ECP_4243 198 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 110643021 Common - peptidase ECP_2866 197 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 110643734 Common - putative methyltransferase ECP_3587 53 None None None 110643470 Common - malate dehydrogenase ECP_3319 179 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 110643614 Common - putative mutase ECP_3465 73 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 110641776 Common - putative lipoprotein ECP_1600 132 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 110644595 Common - hypothetical protein ECP_4483 61 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 110642154 Common - IS1400 transposase B ECP_1984 107 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642931 Common - flavodoxin ECP_2771 69 COG0716 FldA, Flavodoxins Energy production and conversion 110642238 Common - imidazole glycerol phosphate synthase subunit HisF ECP_2068 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 110642749 Common - alpha-ketoglutarate transporter ECP_2589 126 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643887 Common - putative membrane protein YicG ECP_3744 114 COG2860 COG2860, Predicted membrane protein Function unknown 110640242 Common - dihydrodipicolinate reductase ECP_0029 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 110642891 Common - hypothetical protein ECP_2731 10 None None None 110642376 Common - predicted kinase ECP_2206 129 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110642226 Common - hypothetical protein ECP_2056 54 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110641794 Common - hypothetical protein YdhV (hypothetical aldehyde ferredoxin oxidoreductase) ECP_1620 57 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 110641937 Common - hypothetical protein ECP_1763 16 COG4811 COG4811, Predicted membrane protein Function unknown 110643728 Common - hypothetical protein YhiM ECP_3581 5 None None None 110644232 Common - formate dehydrogenase accessory protein FdhE ECP_4103 42 COG3058 FdhE, Uncharacterized protein involved in formate dehydrogenase formation Posttranslational modification, protein turnover, chaperones 110642663 Common - polyphosphate kinase ECP_2503 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 110641801 Common - selenocysteine lyase ECP_1627 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 110642350 Common - hypothetical protein ECP_2180 26 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 110641795 Common - hypothetical protein ECP_1621 153 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110642146 Common - putative D-alanyl carrier protein ECP_1976 9 None None None 110644456 Common - PhnJ protein ECP_4341 45 COG3627 PhnJ, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 110640503 Common - F1C minor fimbrial subunit F precursor ECP_0297 20 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643488 Common - probable zinc-binding dehydrogenase ECP_3337 91 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 110641640 Common - hypothetical H repeat-associated protein of Rhs element ECP_1462 11 COG5433 COG5433, Transposase DNA replication, recombination, and repair 110643421 Common greA transcription elongation factor GreA ECP_3268 204 COG0782 GreA, Transcription elongation factor Transcription 110642936 Common queF 7-cyano-7-deazaguanine reductase ECP_2776 86 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 110643004 Common - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase ECP_2849 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110644759 Common - outer membrane usher protein FimD precursor ECP_4652 33 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110640663 Common - proline-specific permease ProY ECP_0461 154 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110644570 Common - 3-ketoacyl-(acyl-carrier-protein) reductase ECP_4458 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110641594 Common - putative phosphatidate cytidylyltransferase ECP_1414 215 COG4589 COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase General function prediction only 110644716 Common - hypothetical protein ECP_4609 4 COG3710 CadC, DNA-binding winged-HTH domains Transcription 110643503 Common prmA ribosomal protein L11 methyltransferase ECP_3352 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 110641040 Common - hypothetical GST-like protein YliJ ECP_0852 95 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110644814 Common - hypothetical protein YjjU ECP_4761 45 COG4667 COG4667, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 110642261 Common - GDP-mannose mannosyl hydrolase ECP_2091 27 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 110640386 Common - PII uridylyl-transferase ECP_0175 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 110640532 Common - lysine decarboxylase ECP_0327 86 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 110643636 Common - phosphoenolpyruvate carboxykinase ECP_3489 96 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 110640903 Pathogen - hypothetical protein YbfJ ECP_0704 1 None None None 110642499 Common - hypothetical protein ECP_2334 23 COG3092 COG3092, Uncharacterized protein conserved in bacteria Function unknown 110643862 Common rfaD ADP-L-glycero-D-mannoheptose-6-epimerase ECP_3719 225 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110643389 Common - hypothetical protein ECP_3236 129 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 110643451 Common - aerobic respiration control sensor protein ArcB ECP_3298 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110643485 Common - Rod shape-determining protein MreB ECP_3334 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 110644826 Common - DNA repair protein RadA ECP_4773 217 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 110641902 Common - aldose 1-epimerase-like protein ECP_1728 61 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 110644545 Common - hypothetical protein YjfN ECP_4433 8 None None None 110643848 Common - DNA-binding transcriptional repressor ECP_3705 131 COG2186 FadR, Transcriptional regulators Transcription 110644728 Common - hypothetical protein ECP_4621 7 None None None 110642569 Common - aminotransferase ECP_2405 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 110642301 Common - galactitol-specific PTS system component IIB ECP_2131 15 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 110644564 Common - hypothetical protein ECP_4452 50 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 110643110 Common - adenine DNA glycosylase ECP_2955 231 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 110644438 Common - predicted outer membrane factor of efflux pump ECP_4321 113 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110640513 Pathogen - hypothetical protein ECP_0307 2 None None None 110641849 Common - hypothetical protein ECP_1675 36 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 110642115 Common - yersiniabactin biosynthetic protein YbtU ECP_1944 15 COG4693 PchG, Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 110644773 Common - hypothetical protein ECP_4666 11 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 110644493 Pathogen - hypothetical protein ECP_4378 1 None None None 110641813 Common - quinate/shikimate dehydrogenase ECP_1639 225 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 110640607 Pathogen - hypothetical protein ECP_0402 1 None None None 110640252 Common - crotonobetainyl-CoA dehydrogenase ECP_0039 160 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 110640304 Common murC UDP-N-acetylmuramate--L-alanine ligase ECP_0093 209 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 110642678 Common - hypothetical protein YfgM (putative membrane protein) ECP_2518 60 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 110643804 Common - major cold shock protein ECP_3659 181 COG1278 CspC, Cold shock proteins Transcription 110640291 Common ilvH acetolactate synthase 3 regulatory subunit ECP_0080 191 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 110641360 Pathogen - minor tail protein G ECP_1178 3 None None None 110643604 Common - hypothetical protein ECP_3455 62 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 110642617 Common - coproporphyrinogen III oxidase ECP_2457 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 110642966 Pathogen - hypothetical protein ECP_2811 2 None None None 110640870 Common - LPS-assembly lipoprotein RplB ECP_0671 28 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 110644794 Common - putative Na(+)/H(+) exchanger YjcE ECP_4687 128 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 110640362 Common - hypothetical fimbrial-like protein YadN precursor ECP_0151 7 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641751 Common - electron transport complex protein RnfB ECP_1573 121 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 110640962 Common - DNA-binding transcriptional dual regulator ECP_0772 58 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 110641758 Common - glutathionine S-transferase ECP_1580 84 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110641850 Common - putative sodium:dicarboxylate symporter YdjN ECP_1676 154 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 110641627 Common - hypothetical protein YdcZ (putative membrane protein) ECP_1449 35 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 110641839 Common infC translation initiation factor IF-3 ECP_1665 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 110642202 Pathogen - hypothetical protein ECP_2032 1 None None None 110644593 Common - fructose-1,6-bisphosphatase ECP_4481 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 110641965 Common - hypothetical lipoprotein YebF precursor ECP_1791 8 None None None 110641401 Pathogen - hypothetical protein ECP_1219 1 None None None 110641308 Common - adenylosuccinate lyase ECP_1126 229 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 110643693 Common - glycerol-3-phosphate transporter periplasmic binding protein ECP_3546 106 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110642162 Common - hypothetical protein ECP_1992 1 None None None 110643607 Common - nitrite transporter NirC ECP_3458 90 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 110641862 Common - hypothetical protein ECP_1688 34 COG3758 COG3758, Uncharacterized protein conserved in bacteria Function unknown 110643177 Common - 3-deoxy-manno-octulosonate cytidylyltransferase ECP_3023 148 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 110644317 Common nusG transcription antitermination protein NusG ECP_4195 215 COG0250 NusG, Transcription antiterminator Transcription 110641329 Common - hypothetical protein ECP_1147 4 COG4197 COG4197, Uncharacterized protein conserved in bacteria, prophage-related Function unknown 110641273 Common - hypothetical protein ECP_1089 183 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 110640523 Common - transposase for insertion sequence IS100 ECP_0318 61 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641087 Common - cysteine/glutathione ABC transporter membrane/ATP-binding component ECP_0901 248 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 110643000 Common - putative integral membrane transport protein ECP_2845 95 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 110644617 Common valS valyl-tRNA synthetase ECP_4507 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110644744 Pathogen - hypothetical protein ECP_4637 3 None None None 110641053 Common - nitroreductase A ECP_0865 80 COG0778 NfnB, Nitroreductase Energy production and conversion 110644587 Common - hypothetical protein YtfP ECP_4475 30 COG2105 COG2105, Uncharacterized conserved protein Function unknown 110642817 Common alaS alanyl-tRNA synthetase ECP_2657 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110642727 Common recO DNA repair protein RecO ECP_2567 83 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 110642994 Pathogen - hypothetical protein ECP_2839 3 None None None 110641246 Common - flagella synthesis protein FlgN ECP_1062 12 COG3418 COG3418, Flagellar biosynthesis/type III secretory pathway chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 110642442 Common - ribonucleotide-diphosphate reductase subunit alpha ECP_2277 206 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 110642041 Common - putative kinase inhibitor ECP_1869 126 COG1881 COG1881, Phospholipid-binding protein General function prediction only 110643950 Pathogen - hypothetical protein ECP_3808 1 None None None 110640620 Common lacY galactoside permease ECP_0416 27 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 110641955 Common - hypothetical protein YebW ECP_1781 8 None None None 110643835 Common - selenocysteinyl-tRNA-specific translation factor ECP_3692 249 COG3276 SelB, Selenocysteine-specific translation elongation factor Translation, ribosomal structure and biogenesis 110642555 Common - D-serine dehydratase ECP_2391 39 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 110642048 Common fliJ flagellar biosynthesis chaperone ECP_1876 39 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 110643577 Common - bacterioferritin, iron storage and detoxification protein ECP_3426 107 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 110641358 Pathogen - minor tail protein U ECP_1176 4 None None None 110642970 Common - hypothetical protein ECP_2815 24 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 110644320 Common rplJ 50S ribosomal protein L10 ECP_4198 205 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 110644039 Common - predicted lipoproteinC ECP_3897 5 None None None 110641072 Common - pyruvate dehydrogenase ECP_0886 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 110642978 Common - hypothetical protein ECP_2823 13 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 110643210 Common glcE glycolate oxidase FAD binding subunit ECP_3056 156 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 110644623 Common - HTH-type transcriptional regulator IdnR ECP_4513 129 COG1609 PurR, Transcriptional regulators Transcription 110641224 Common mdoC glucans biosynthesis protein ECP_1040 23 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 110640276 Common - DNA-binding transcriptional regulator AraC ECP_0065 126 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110642692 Common hscB co-chaperone HscB ECP_2532 57 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 110643792 Common - hypothetical protein ECP_3645 1 None None None 110642917 Common - hypothetical membrane protein ECP_2757 88 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 110640322 Common - regulatory protein AmpE ECP_0111 17 COG3725 AmpE, Membrane protein required for beta-lactamase induction Defense mechanisms 110640702 Common - peptidyl-prolyl cis-trans isomerase (rotamase D) ECP_0502 161 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 110642549 Common - putative transporter protein ECP_2384 42 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 110642000 Common - chemotaxis-specific methylesterase ECP_1828 211 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 110640426 Common - predicted membrane-bound lytic murein transglycosylase D ECP_0217 152 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 110644519 Common - phosphatidylserine decarboxylase ECP_4404 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 110642573 Common - putative phosphoenolpyruvate-protein phosphotransferase YpdD ECP_2409 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 110642775 Common ppnK inorganic polyphosphate/ATP-NAD kinase ECP_2615 240 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 110641624 Common - putative betaine aldehyde dehydrogenase ECP_1446 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110641384 Common - hypothetical protein YmgA ECP_1202 1 None None None 110642759 Common - translation inhibitor protein RaiA ECP_2599 91 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 110644061 Common - putative outer membrane protein YieC precursor ECP_3919 22 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 110642904 Common - putative electron transfer flavoprotein subunit YgcR ECP_2744 105 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 110643766 Common treF trehalase ECP_3619 30 COG1626 TreA, Neutral trehalase Carbohydrate transport and metabolism 110643244 Common - biopolymer transport protein ExbB ECP_3090 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 110641564 Common - hypothetical transcriptional regulator YcjZ (LysR family) ECP_1382 133 COG0583 LysR, Transcriptional regulator Transcription 110642988 Common - protease III precursor ECP_2833 184 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 110641734 Common - fumarate hydratase class I, aerobic ECP_1556 147 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 110641780 Pathogen - hypothetical protein ECP_1604 2 None None None 110643595 Common - probable phosphoribulokinase ECP_3446 52 COG3954 PrkB, Phosphoribulokinase Energy production and conversion 110643085 Common - putative metalloprotease YggG ECP_2930 115 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 110643974 Common - putative ParB-like nuclease ECP_3832 17 COG1475 Spo0J, Predicted transcriptional regulators Transcription 110643283 Common - putative glutathionylspermidine synthase ECP_3129 54 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 110642881 Common - hypothetical protein (hypothetical flavodoxin) ECP_2721 98 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 110641170 Common - cold shock-like protein CspH ECP_0986 43 COG1278 CspC, Cold shock proteins Transcription 110641869 Common - exonuclease III ECP_1695 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 110641897 Common - hypothetical metabolite transport protein YdjK ECP_1723 127 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643906 Common - putative transporter ECP_3763 80 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 110641830 Common - probable lipoprotein NlpC precursor ECP_1656 141 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 110640595 Common - choline transport protein BetT ECP_0390 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 110643901 Common - putative PTS enzyme-II fructose ECP_3758 67 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 110640551 Pathogen - hypothetical protein ECP_0346 1 None None None 110641472 Common - periplasmic oligopeptide-binding protein precursor ECP_1290 208 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 110641667 Common - glutamate decarboxylase beta ECP_1489 67 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 110642896 Common - phosphoadenosine phosphosulfate reductase ECP_2736 154 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 110642793 Common - hypothetical protein YgaW ECP_2633 13 None None None 110644303 Common - DNA-binding transcriptional regulator OxyR ECP_4176 192 COG0583 LysR, Transcriptional regulator Transcription 110641910 Common - hypothetical protein YeaL (putative membrane protein) ECP_1736 28 COG2707 COG2707, Predicted membrane protein Function unknown 110642352 Common - cytidine deaminase ECP_2182 43 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 110640880 Common - magnesium and cobalt efflux protein CorC ECP_0681 220 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 110641491 Common - tryptophan synthase subunit beta ECP_1309 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 110642910 Common - aminoimidazole riboside kinase ECP_2750 212 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110644422 Common nrfA cytochrome c nitrite reductase ECP_4303 40 COG3303 NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit Inorganic ion transport and metabolism 110640750 Common - glutaminase ECP_0550 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 110641804 Common - cysteine desulfurase activator complex subunit SufB ECP_1630 186 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 110643923 Pathogen - hypothetical protein ECP_3781 1 None None None 110641936 Common - mannose-specific PTS system protein IID ECP_1762 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 110642492 Common - NADH dehydrogenase subunit A ECP_2327 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 110641211 Common - hypothetical protein YcdY ECP_1027 20 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 110642860 Pathogen - hypothetical protein ECP_2700 1 None None None 110641117 Common - hypothetical protein ECP_0931 74 COG1434 COG1434, Uncharacterized conserved protein Function unknown 110642460 Common - aluminum inducible protein ECP_2295 4 None None None 110641947 Common - heat shock protein HtpX ECP_1773 188 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 110643750 Common - hypothetical protein ECP_3603 36 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110640732 Common - hypothetical protein ECP_0532 103 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 110642059 Common - hypothetical protein YodD ECP_1887 6 None None None 110642055 Common fliQ flagellar biosynthesis protein FliQ ECP_1883 70 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 110642274 Common - putative assembly protein ECP_2104 43 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 110643867 Common - UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase WaaW ECP_3724 30 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 110644571 Common - putative TetR/AcrR-family transcriptional regulator ECP_4459 102 COG1309 AcrR, Transcriptional regulator Transcription 110642604 Common cysM cysteine synthase B ECP_2444 230 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 110644521 Common - oligoribonuclease ECP_4406 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 110644483 Common - sensory histidine kinase DcuS ECP_4368 205 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 110641562 Common - hypothetical protein ECP_1380 48 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110642070 Common - putative outer membrane pore protein ECP_1898 27 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110640390 Common pyrH uridylate kinase ECP_0179 237 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 110643270 Common - hypothetical phosphosugar isomerases ECP_3116 61 COG1737 RpiR, Transcriptional regulators Transcription 110643348 Common - hypothetical protein YqjE ECP_3195 10 COG5393 COG5393, Predicted membrane protein Function unknown 110642081 Common - phage-related integrase ECP_1909 104 COG0582 XerC, Integrase DNA replication, recombination, and repair 110642422 Common - alkylated DNA repair protein AlkB ECP_2255 56 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 110641485 Common - hypothetical protein ECP_1303 15 None None None 110642435 Common - hypothetical protein YfaQ precursor ECP_2270 7 COG5445 COG5445, Predicted secreted protein Function unknown 110640579 Common - hypothetical protein YkgE ECP_0374 155 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 110643927 Common - F17 fimbrial protein precursor ECP_3785 23 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640557 Common - hypothetical protein YagV precursor ECP_0352 5 None None None 110643048 Common - putative hemolysin (putative membrane protein) ECP_2893 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 110644290 Common - PTS system, fructose-like-2 IIB component 1 ECP_4163 68 COG1445 FrwB, Phosphotransferase system fructose-specific component IIB Carbohydrate transport and metabolism 110641353 Pathogen - major capsid protein D ECP_1171 4 None None None 110642528 Common mnmC 5-methylaminomethyl-2-thiouridine methyltransferase ECP_2363 87 COG4121 COG4121, Uncharacterized conserved protein Function unknown 110641383 Common - hypothetical protein YcgZ ECP_1201 2 None None None 110643033 Common - hypothetical protein YjcD (putative xanthine/uracil permease family) ECP_2878 134 COG2252 COG2252, Permeases General function prediction only 110640974 Common - hypothetical protein ECP_0784 220 COG1048 AcnA, Aconitase A Energy production and conversion 110642318 Common - hypothetical fimbrial chaperone YehC precursor ECP_2148 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110643767 Common - hypothetical transcriptional regulator YhjB ECP_3620 152 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110644008 Common - cytoplasmic membrane lipoprotein-28 ECP_3866 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 110640966 Common modB molybdate ABC transporter permease protein ECP_0776 227 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 110644033 Common - putative oxidoreductase ECP_3891 39 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 110641635 Common - hypothetical protein ECP_1457 7 COG4104 COG4104, Uncharacterized conserved protein Function unknown 110643936 Pathogen - hypothetical protein ECP_3794 1 None None None 110643526 Common fmt methionyl-tRNA formyltransferase ECP_3375 217 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 110642130 Common cbl transcriptional regulator Cbl ECP_1959 191 COG0583 LysR, Transcriptional regulator Transcription 110643593 Common - predicted hydrolase ECP_3444 71 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 110641477 Common - dsDNA-mimic protein ECP_1295 18 COG3099 COG3099, Uncharacterized protein conserved in bacteria Function unknown 110644247 Common - hypothetical protein ECP_4120 77 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 110642196 Pathogen - hypothetical protein ECP_2026 3 None None None 110641432 Pathogen - hypothetical protein ECP_1250 1 None None None 110640988 Common moaD molybdopterin synthase small subunit ECP_0798 74 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 110642770 Common rpsP 30S ribosomal protein S16 ECP_2610 212 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 110642598 Common - cysteine synthase A ECP_2438 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 110642296 Common - hypothetical protein YegR ECP_2126 3 None None None 110644321 Common rplL 50S ribosomal protein L7/L12 ECP_4199 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 110641019 Common - putative membrane protein YbiP ECP_0829 47 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110642498 Common - hypothetical protein ECP_2333 18 COG3013 COG3013, Uncharacterized conserved protein Function unknown 110644001 Common - hypothetical protein ECP_3859 8 None None None 110644666 Pathogen - hypothetical protein ECP_4559 1 None None None 110641237 Common - DNA damage-inducible protein I ECP_1053 12 None None None 110642028 Pathogen - hypothetical protein ECP_1856 1 None None None 110641397 Pathogen - hypothetical protein ECP_1215 1 None None None 110644376 Common - maltose regulon periplasmic protein ECP_4255 17 None None None 110642429 Common - sensory histidine kinase AtoS ECP_2262 223 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 110642441 Common - adhesin ECP_2276 111 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110644056 Common - putative membrane transport protein ECP_3914 134 COG2252 COG2252, Permeases General function prediction only 110644486 Common - hypothetical protein YjdK ECP_4371 2 None None None 110640876 Common - glutamate/aspartate transport system permease protein GltJ ECP_0677 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 110644758 Common - chaperone protein FimC precursor ECP_4651 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110644029 Common - heat shock chaperone IbpB ECP_3887 67 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 110641133 Common - NAD(P)H-dependent FMN reductase ECP_0949 55 COG0431 COG0431, Predicted flavoprotein General function prediction only 110640302 Common - cell division protein FtsW ECP_0091 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 110642766 Common - predicted outer membrane lipoprotein ECP_2606 144 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 110640572 Common - putative adhesin/invasin ECP_0367 55 None None None 110642061 Common - hypothetical protein YedQ ECP_1889 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110643833 Common sgbE L-ribulose-5-phosphate 4-epimerase ECP_3688 108 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 110640263 Common - putative toxin of gyrase inhibiting toxin-antitoxin system ECP_0050 14 None None None 110644382 Common - putative stress-response protein ECP_4263 57 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 110643325 Common - 2,4-dienoyl-CoA reductase ECP_3172 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 110640997 Common - putative inner membrane protein ECP_0807 129 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 110641661 Common - biofilm-dependent modulation protein ECP_1483 4 None None None 110641715 Common - putative dithiobiotin synthetase ECP_1537 141 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 110643227 Common - bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase ECP_3073 52 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 110641567 Common - universal stress protein UspE ECP_1387 52 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 110641631 Common - hypothetical protein YncE precursor ECP_1453 52 COG3391 COG3391, Uncharacterized conserved protein Function unknown 110641094 Common - anaerobic dimethyl sulfoxide reductase chain A precursor ECP_0908 184 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110643965 Common - putative ABC-transporter membrane protein ECP_3823 186 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 110642622 Common - ethanolamine ammonia-lyase heavy chain ECP_2462 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 110640416 Common - hypothetical protein YaeB ECP_0205 95 COG1720 COG1720, Uncharacterized conserved protein Function unknown 110642608 Common - thiosulfate transporter subunit ECP_2448 88 COG4150 CysP, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 110644655 Common - hypothetical protein ECP_4548 12 None None None 110642287 Common - multidrug efflux system protein MdtE ECP_2117 192 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644065 Common - transcriptional regulator PhoU ECP_3923 194 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 110642785 Common - 4-aminobutyrate aminotransferase ECP_2625 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 110642615 Common - putative acetyltransferase ECP_2455 89 COG0456 RimI, Acetyltransferases General function prediction only 110641952 Common - hypothetical protein YebT (putative membrane protein) ECP_1778 56 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 110641462 Common - hypothetical protein ECP_1280 88 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 110641879 Common - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase ECP_1705 162 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 110643109 Common trmB tRNA (guanine-N(7))-methyltransferase ECP_2954 177 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 110644450 Common phnP carbon-phosphorus lyase complex accessory protein ECP_4335 56 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 110641823 Common - phosphoenolpyruvate synthase ECP_1649 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 110641729 Common - hypothetical protein ECP_1551 14 COG3136 GlpM, Uncharacterized membrane protein required for alginate biosynthesis General function prediction only 110640318 Common - hypothetical protein ECP_0107 225 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 110643235 Common - predicted hydrogenase 2 cytochrome b type component ECP_3081 29 COG5557 COG5557, Polysulphide reductase Energy production and conversion 110642309 Common - hypothetical transcriptional regulator YegW ECP_2139 125 COG2188 PhnF, Transcriptional regulators Transcription 110640869 Common holA DNA polymerase III subunit delta ECP_0670 70 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 110641150 Common - probable membrane protein YccS ECP_0966 59 COG1289 COG1289, Predicted membrane protein Function unknown 110643567 Common - putative general secretion pathway protein G precursor ECP_3416 106 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110642840 Common hycI hydrogenase 3 maturation protease ECP_2680 34 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 110643299 Common - putative signal transduction protein ECP_3145 32 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 110644073 Common - F0F1 ATP synthase subunit beta ECP_3931 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 110640668 Common yajC preprotein translocase subunit YajC ECP_0466 168 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 110640234 Common nhaR transcriptional activator NhaR ECP_0021 111 COG0583 LysR, Transcriptional regulator Transcription 110643341 Common - putative CS1 type fimbrial major subunit ECP_3188 5 None None None 110642827 Common - DNA-bindng transcriptional repressor ECP_2667 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110643088 Common - arginine decarboxylase ECP_2933 115 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 110641302 Common potA putrescine/spermidine ABC transporter ATPase protein ECP_1120 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 110640899 Common - glutaminyl-tRNA synthetase ECP_0700 242 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 110642163 Pathogen - hypothetical protein ECP_1993 1 None None None 110641720 Common - putative protease YdgD precursor ECP_1542 21 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 110644184 Common - TatABCE protein translocation system subunit ECP_4053 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 110644177 Common - putative transcriptional regulator ECP_4046 118 COG1414 IclR, Transcriptional regulator Transcription 110642282 Common - hypothetical protein ECP_2112 2 COG4245 TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain General function prediction only 110643954 Common - CS12 fimbria chaperone FasB-like protein ECP_3812 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110641183 Common - chaperone-modulator protein CbpM ECP_0999 18 None None None 110643133 Pathogen - hypothetical protein ECP_2979 2 None None None 110640314 Common - hypothetical protein ECP_0103 44 COG4582 COG4582, Uncharacterized protein conserved in bacteria Function unknown 110643391 Common - hypothetical protein ECP_3238 69 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 110640822 Common - enterobactin exporter EntS ECP_0623 61 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643694 Common livF leucine/isoleucine/valine transporter ATP-binding subunit ECP_3547 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 110641455 Common - nitrite extrusion protein ECP_1273 72 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 110643193 Common - hypothetical type II secretion protein GspK ECP_3039 36 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 110641271 Common - 3-oxoacyl-(acyl carrier protein) synthase II ECP_1087 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110644704 Common - hypothetical protein ECP_4597 36 COG4869 PduL, Propanediol utilization protein Secondary metabolites biosynthesis, transport, and catabolism 110640284 Common leuD isopropylmalate isomerase small subunit ECP_0073 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 110641195 Common - putative monooxygenase YcdM ECP_1011 77 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 110641865 Common - succinylarginine dihydrolase ECP_1691 34 COG3724 AstB, Succinylarginine dihydrolase Amino acid transport and metabolism 110640537 Common - putative autotransporter ECP_0332 138 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110643560 Common rpsJ 30S ribosomal protein S10 ECP_3409 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 110644671 Common - putative histidine kinase-like ATPases ECP_4564 216 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 110644697 Common - D-serine dehydratase ECP_4590 39 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 110642871 Common - DNA mismatch repair protein ECP_2711 201 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 110642183 Common - hypothetical protein ECP_2013 3 None None None 110644459 Common - PhnG protein ECP_4344 31 COG3624 PhnG, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 110644281 Common - putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase ECP_4154 141 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 110642726 Common - pyridoxal phosphate biosynthetic protein PdxJ ECP_2566 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 110640848 Common - putative citrate lyase synthetase ECP_0649 25 COG3053 CitC, Citrate lyase synthetase Energy production and conversion 110640744 Common - hypothetical protein ECP_0544 112 COG2606 EbsC, Uncharacterized conserved protein Function unknown 110641990 Common - cytochrome c-type protein TorY ECP_1818 49 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 110640383 Common - carbohydrate diacid transcriptional activator CdaR ECP_0172 49 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 110641507 Common - DNA topoisomerase I ECP_1325 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 110644562 Common - hypothetical protein ECP_4450 13 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 110641336 Common - hypothetical protein ECP_1154 7 None None None 110642989 Common recC exonuclease V subunit gamma ECP_2834 65 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 110640797 Common - hypothetical protein ECP_0598 3 None None None 110642880 Common - hypothetical beta-lactamase-related protein ECP_2720 17 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 110640886 Common - UMP phosphatase ECP_0687 109 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 110642756 Common - hypothetical protein ECP_2596 181 COG1496 COG1496, Uncharacterized conserved protein Function unknown 110641061 Common rumB 23S rRNA metyluridine methyltransferase ECP_0873 185 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 110643622 Common aroB 3-dehydroquinate synthase ECP_3475 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 110644774 Common - RNA 2'-phosphotransferase-like protein ECP_4667 44 COG1859 KptA, RNA:NAD 2'-phosphotransferase Translation, ribosomal structure and biogenesis 110643912 Pathogen - hypothetical protein ECP_3770 1 None None None 110644180 Common - hypothetical protein YigP ECP_4049 30 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 110641763 Common - outer membrane lipoprotein ECP_1587 20 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 110642570 Common - hypothetical protein YpdA ECP_2406 105 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 110642733 Common rseB periplasmic negative regulator of sigmaE ECP_2573 48 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 110640552 Common - insertion element IS1 1/2/3/5/6 protein InsA ECP_0347 11 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640244 Common - carbamoyl phosphate synthase small subunit ECP_0031 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 110642258 Common - phosphomannomutase ECP_2088 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 110641254 Common flgG flagellar basal body rod protein FlgG ECP_1070 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 110641029 Common - molybdopterin biosynthesis protein MoeB ECP_0839 221 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 110641556 Common - hypothetical protein YcjX ECP_1374 42 COG3106 COG3106, Predicted ATPase General function prediction only 110642414 Common - periplasmic nitrate reductase precursor ECP_2247 184 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110641740 Common - uid operon repressor ECP_1562 120 COG1309 AcrR, Transcriptional regulator Transcription 110642717 Common - hypothetical protein ECP_2557 10 None None None 110641286 Common - hypothetical protein ECP_1102 49 COG3134 COG3134, Predicted outer membrane lipoprotein Function unknown 110641679 Common - hypothetical protein HipA ECP_1501 42 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 110644151 Common - predicted hydrolase ECP_4020 114 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 110643858 Common - hypothetical protein YibQ precursor ECP_3715 65 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 110644516 Common - lysyl-tRNA synthetase ECP_4401 221 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 110644678 Common - hypothetical protein ECP_4571 125 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110643427 Common - octaprenyl diphosphate synthase ECP_3274 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 110642086 Common - hypothetical protein ECP_1914 33 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 110644446 Common - D-allose transporter subunit ECP_4331 103 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110644148 Common - threonine efflux system ECP_4017 103 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 110642171 Common - hypothetical protein YaiO ECP_2001 2 None None None 110644003 Pathogen - hypothetical protein ECP_3861 3 None None None 110641495 Common - PHP domain containing protein (TRPH) ECP_1313 124 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 110641100 Common - formate acetyltransferase 1 ECP_0914 58 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 110642980 Common - hypothetical posphosugar isomerase ECP_2825 157 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 110643370 Common - probable galactarate transporter ECP_3217 184 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110644809 Common rimI ribosomal-protein-alanine N-acetyltransferase ECP_4756 204 COG0456 RimI, Acetyltransferases General function prediction only 110642851 Common - hydrogenase isoenzymes formation protein ECP_2691 77 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 110640890 Common - N-acetyl glucosamine specific PTS system components IIABC ECP_0691 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110641439 Common lolB outer membrane lipoprotein LolB ECP_1257 54 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 110640220 Common - hypothetical protein ECP_0007 85 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 110641702 Common - hypothetical transcriptional regulator YdfH ECP_1524 136 COG1802 GntR, Transcriptional regulators Transcription 110643115 Common - putative membrane protein YqgA ECP_2960 47 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 110644157 Common - hypothetical protein ECP_4026 22 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 110644824 Common - hypothetical protein ECP_4771 17 COG3726 AhpA, Uncharacterized membrane protein affecting hemolysin expression General function prediction only 110644262 Common glpK glycerol kinase ECP_4135 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 110643783 Common - hypothetical protein YhjS ECP_3636 16 None None None 110640407 Common tilS tRNA(Ile)-lysidine synthetase ECP_0196 194 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 110644582 Common - hypothetical protein YtfK ECP_4470 14 None None None 110642455 Common - hypothetical protein YfaW (putative racemase) ECP_2290 96 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110640888 Common nagA N-acetylglucosamine-6-phosphate deacetylase ECP_0689 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 110642357 Common mglC beta-methylgalactoside transporter inner membrane component ECP_2187 128 COG4211 MglC, ABC-type glucose/galactose transport system, permease component Carbohydrate transport and metabolism 110644081 Common gidB glucose-inhibited division protein B ECP_3939 202 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 110643580 Common - elongation factor Tu ECP_3429 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 110644604 Common - magnesium-transporting ATPase MgtA ECP_4492 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 110644528 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase ECP_4416 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 110641885 Common - DNA topoisomerase III ECP_1711 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 110642949 Common - DNA-binding transcriptional activator GcvA ECP_2791 190 COG0583 LysR, Transcriptional regulator Transcription 110642247 Common - hypothetical glycosyltransferase ECP_2077 6 None None None 110643326 Common - hypothetical protein YgjM ECP_3173 17 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 110641997 Common flhB flagellar biosynthesis protein FlhB ECP_1825 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 110643250 Common - hypothetical protein YqhG precursor ECP_3096 4 None None None 110643675 Common - putative eubacterial dITP- and XTP- hydrolyzing enzyme ECP_3528 148 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 110640943 Common - hypothetical protein ECP_0746 15 COG3790 COG3790, Predicted membrane protein Function unknown 110642310 Common - hypothetical protein YegX ECP_2140 42 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 110644126 Common - putative uroporphyrinogen III C-methyltransferase ECP_3995 54 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 110644109 Common rho transcription termination factor Rho ECP_3974 201 COG1158 Rho, Transcription termination factor Transcription 110644195 Common - molybdopterin-guanine dinucleotide biosynthesis protein B ECP_4066 98 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 110642847 Common - formate hydrogenase-3 component B ECP_2687 142 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 110640952 Common - Intergral membrane NMN transport protein PnuC ECP_0762 62 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 110644091 Common - D-ribose transporter subunit RbsB ECP_3951 134 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110643181 Common - capsule polysaccharide export protein KpsS ECP_3027 29 COG3562 KpsS, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 110643121 Common - PixF protein ECP_2967 2 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640699 Common clpX ATP-dependent protease ATP-binding subunit ECP_0499 233 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 110642677 Common - outer membrane protein assembly complex subunit YfgL ECP_2517 118 COG1520 COG1520, FOG: WD40-like repeat Function unknown 110642473 Common - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase ECP_2308 101 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 110642807 Common - hypothetical protein YgaZ (hypothetical branched-chain amino acid transport protein AzlC) ECP_2647 104 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 110644389 Common alr alanine racemase ECP_4270 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 110643273 Common - putative iron compound permease protein of ABC transporter family ECP_3119 188 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110641589 Common - hypothetical protein YdbL precursor ECP_1409 32 COG3784 COG3784, Uncharacterized protein conserved in bacteria Function unknown 110640251 Common - crotonobetainyl-CoA:carnitine CoA-transferase ECP_0038 111 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 110640443 Common - hypothetical protein ECP_0235 47 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 110641144 Common - putative protease La ECP_0960 112 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 110643793 Common - periplasmic dipeptide transport protein precursor ECP_3646 212 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 110643919 Pathogen - hypothetical protein ECP_3777 1 None None None 110644464 Common - hypothetical protein ECP_4349 65 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 110641704 Common - hypothetical oxidoreductase YdfI ECP_1526 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 110642332 Common - hypothetical protein YehS ECP_2162 31 COG4807 COG4807, Uncharacterized protein conserved in bacteria Function unknown 110644072 Common atpC F0F1 ATP synthase subunit epsilon ECP_3930 179 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 110644141 Common - magnesium/nickel/cobalt transporter CorA ECP_4010 148 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 110642483 Common - NADH dehydrogenase subunit K ECP_2318 67 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 110644045 Common - chromosomal replication initiator protein DnaA ECP_3903 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 110642367 Common - putative DNA-binding transcriptional regulator ECP_2197 187 COG0583 LysR, Transcriptional regulator Transcription 110640400 Common - UDP-N-acetylglucosamine acyltransferase ECP_0189 153 COG1043 LpxA, Acyl- acyl carrier protein 110641989 Common - hypothetical protein YecP ECP_1815 54 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 110641411 Common nhaB sodium/proton antiporter ECP_1229 33 COG3067 NhaB, Na+/H+ antiporter Inorganic ion transport and metabolism 110640907 Common - replication initiation regulator SeqA ECP_0708 23 COG3057 SeqA, Negative regulator of replication initiationR DNA replication, recombination, and repair 110644810 Common - nucleotidase ECP_4757 116 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 110644804 Common - DNA-binding transcriptional activator BglJ ECP_4697 36 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110642135 Common - hypothetical protein ECP_1965 151 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 110642168 Common - hypothetical protein YaiS ECP_1998 34 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 110641638 Pathogen - hypothetical protein ECP_1460 1 None None None 110642614 Common - hypothetical protein YfdZ ECP_2454 11 None None None 110644297 Common - acetylornithine deacetylase ECP_4170 202 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 110641161 Common - hydrogenase-1 small chain precursor ECP_0977 77 COG1740 HyaA, Ni,Fe-hydrogenase I small subunit Energy production and conversion 110642403 Common - cytochrome c-type biogenesis protein CcmH precursor ECP_2234 51 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 110640350 Common - aspartate alpha-decarboxylase ECP_0139 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 110644580 Common - PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ECP_4468 178 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 110640564 Common rpmJ 50S ribosomal protein L36 ECP_0359 61 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 110643890 Common rpoZ DNA-directed RNA polymerase subunit omega ECP_3747 110 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 110640837 Common - alkyl hydroperoxide reductase subunit C ECP_0638 216 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 110642773 Common - hypothetical protein ECP_2613 218 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 110642810 Common - multidrug resistance protein A ECP_2650 151 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110641621 Common - hypothetical ABC transporter ATP-binding protein YdcT ECP_1443 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 110642820 Common - competence damage-inducible protein A ECP_2660 191 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 110640676 Common ribH riboflavin synthase subunit beta ECP_0474 229 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 110643873 Common - lipopolysaccharide core biosynthesis protein ECP_3730 111 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 110640995 Common - putative membrane protein YbhQ ECP_0805 6 None None None 110641030 Common - molybdopterin biosynthesis protein MoeA ECP_0840 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 110642043 Common fliE flagellar hook-basal body protein FliE ECP_1871 71 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 110642324 Common - hypothetical protein YehI ECP_2154 11 None None None 110644306 Common - probable transporter transmembrane protein ECP_4179 176 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644424 Common - NrfC protein ECP_4305 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110642572 Common - hypothetical transcriptional regulator YpdC ECP_2408 111 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110640690 Common - cytochrome o ubiquinol oxidase subunit III ECP_0490 158 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 110643630 Common nudE ADP-ribose diphosphatase NudE ECP_3483 114 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 110644621 Common - putative membrane protein YjgQ ECP_4511 110 COG0795 COG0795, Predicted permeases General function prediction only 110642052 Common fliN flagellar motor switch protein FliN ECP_1880 124 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 110643057 Common - hypothetical protein ECP_2902 37 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 110642612 Common - putative iron-dependent peroxidase ECP_2452 50 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 110642335 Common - MerR-like regulator A ECP_2165 54 COG0789 SoxR, Predicted transcriptional regulators Transcription 110640711 Common - nitrogen regulatory protein P-II 2 ECP_0511 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 110641837 Common rplT 50S ribosomal protein L20 ECP_1663 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 110641173 Common - Gns protein ECP_0989 4 None None None 110644238 Common - hypothetical protein YiiL ECP_4111 40 COG3254 COG3254, Uncharacterized conserved protein Function unknown 110643799 Common - biotin sulfoxide reductase ECP_3654 179 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110642845 Common - formate hydrogenlyase subunit 4 ECP_2685 179 COG0650 HyfC, Formate hydrogenlyase subunit 4 Energy production and conversion 110644639 Pathogen - hypothetical protein ECP_4532 1 None None None 110642234 Common - histidinol-phosphate aminotransferase ECP_2064 233 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 110642805 Common proX glycine betaine transporter periplasmic subunit ECP_2645 55 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 110641209 Common - putative 2-hydroxyacid dehydrogenase YcdW ECP_1025 226 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 110643315 Common - aerotaxis receptor ECP_3162 161 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 110642648 Common - hypothetical protein YpfI ECP_2488 48 COG1444 COG1444, Predicted P-loop ATPase fused to an acetyltransferase General function prediction only 110641279 Common - purine nucleoside phosphoramidase ECP_1095 224 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 110641042 Common - DNA-binding transcriptional repressor ECP_0854 112 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110641571 Common - multidrug resistance protein A ECP_1391 156 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110642912 Common - PTS system, sucrose-specific IIBC component ECP_2752 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110640783 Common - phosphoribosylaminoimidazole carboxylase catalytic subunit ECP_0583 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 110642731 Common - GTP-binding protein LepA ECP_2571 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 110643035 Common - putative oxidoreductase Fe-S binding subunit ECP_2880 210 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 110644132 Common - hypothetical protein ECP_4001 3 None None None 110642874 Common - hypothetical oxidoreductase YgbJ ECP_2714 166 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 110644043 Common recF recombination protein F ECP_3901 166 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 110643663 Common - putative fimbrial chaperone precursor ECP_3516 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110640756 Common - putative ABC transporter ATP-binding protein YbbL ECP_0556 249 COG4619 COG4619, ABC-type uncharacterized transport system, ATPase component General function prediction only 110642004 Common - chemotaxis protein CheA ECP_1832 151 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 110641980 Common - hypothetical protein ECP_1806 8 None None None 110644786 Common - hypothetical protein ECP_4679 76 COG1479 COG1479, Uncharacterized conserved protein Function unknown 110643285 Common - putative thiol-disulfide isomerase and thioredoxin ECP_3131 37 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 110641531 Common - peptide transport system ATP-binding protein SapD ECP_1349 249 COG4170 SapD, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 110644499 Common fxsA FxsA ECP_4384 14 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 110640751 Common - hypothetical amino acid transporter YbaT protein ECP_0551 129 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110640488 Pathogen - hypothetical protein ECP_0282 1 None None None 110644333 Common - endonuclease V ECP_4211 73 COG1515 Nfi, Deoxyinosine 3'endonuclease (endonuclease V) DNA replication, recombination, and repair 110640433 Common - hypothetical membrane protein ECP_0225 15 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 110641470 Common - hypothetical protein ECP_1288 159 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 110643275 Common - putative iron compound receptor ECP_3121 117 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 110640968 Common - predicted hydrolase ECP_0778 106 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 110641912 Common - hypothetical transport protein YeaN ECP_1738 77 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 110642330 Common - hypothetical protein ECP_2160 2 None None None 110642178 Common - hypothetical protein ECP_2008 6 None None None 110642522 Common truA tRNA pseudouridine synthase A ECP_2357 236 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 110641261 Common - hypothetical protein ECP_1077 3 None None None 110641002 Common - hypothetical protein ECP_0812 21 COG3236 COG3236, Uncharacterized protein conserved in bacteria Function unknown 110641403 Common - protein YcgK precursor ECP_1221 8 None None None 110640456 Common - hypothetical protein ECP_0249 189 COG0388 COG0388, Predicted amidohydrolase General function prediction only 110642206 Common - hypothetical TonB dependent receptor ECP_2036 97 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 110644107 Common - ATP-dependent RNA helicase RhlB ECP_3972 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 110644436 Common - putative transporter, permease protein ECP_4317 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110644817 Common - hypothetical protein ECP_4764 14 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 110641628 Common - hypothetical acetyltransferase YncA ECP_1450 111 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 110641492 Common - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase ECP_1310 220 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 110641811 Common - hypothetical transport protein YdiM ECP_1637 40 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110644474 Common - putative regulatory protein AdiY ECP_4359 9 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110640915 Pathogen - hypothetical protein ECP_0718 1 None None None 110641362 Common - minor tail protein precursor H ECP_1180 20 COG5281 COG5281, Phage-related minor tail protein Function unknown 110640622 Common lacI lac repressor ECP_0418 128 COG1609 PurR, Transcriptional regulators Transcription 110643339 Common - putative usher protein ECP_3186 9 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110643266 Common - DNA-binding response regulator in two-component regulatory system with QseC ECP_3112 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110641942 Common - hypothetical protein YebO ECP_1768 8 None None None 110642188 Pathogen - hypothetical protein ECP_2018 1 None None None 110643836 Common - selenocysteine synthase ECP_3693 73 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 110643979 Common - putative transposase ECP_3837 39 None None None 110641453 Common - nitrate/nitrite sensor protein NarX ECP_1271 148 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 110643104 Common - coproporphyrinogen III oxidase ECP_2949 206 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 110642567 Common - hypothetical protein YfdY ECP_2403 3 None None None 110641713 Common - twin-argninine leader-binding protein DmsD ECP_1535 26 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 110641950 Common - protein YebR (putative GAF domain-containing protein) ECP_1776 82 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 110643236 Common - hydrogenase 2 protein HybA ECP_3082 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110643145 Common - hypothetical protein ECP_2991 1 None None None 110641765 Common - hypothetical protein YdhI (putative inner membrane protein) ECP_1589 9 None None None 110642097 Pathogen - hypothetical protein ECP_1925 1 None None None 110642544 Common fadJ multifunctional fatty acid oxidation complex subunit alpha ECP_2379 171 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 110643609 Common - hypothetical protein YhfL ECP_3460 6 None None None 110643677 Common - hypothetical DNA helicase ECP_3530 220 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 110643014 Common - putative metalloendopeptidase ECP_2859 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 110643802 Common - hypothetical protein YiaF ECP_3657 12 None None None 110642694 Common - scaffold protein ECP_2534 154 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 110640424 Common - hypothetical protein ECP_0215 31 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 110640961 Common - putative molybdenum transport ATP-binding protein ModF ECP_0771 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 110644630 Common - putative superfamily I DNA helicases ECP_4523 66 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 110642906 Common - hypothetical flavoprotein YgcU ECP_2746 194 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 110642010 Common - trehalose-6-phosphate synthase ECP_1838 97 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 110643432 Common - hypothetical protein YrbC (putative toluene tolerance protein) ECP_3279 78 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 110641248 Common flgA flagellar basal body P-ring biosynthesis protein FlgA ECP_1064 28 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 110641586 Common - D-lactate dehydrogenase ECP_1406 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 110643318 Pathogen - hypothetical protein ECP_3165 1 None None None 110642963 Pathogen - putative transmembrane protein ECP_2808 4 None None None 110644710 Common - hypothetical protein ECP_4603 126 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110640347 Common - putative ABC superfamily (membrane) transport protein YadH ECP_0136 137 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 110642534 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase ECP_2369 221 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 110640265 Common apaG ApaG ECP_0052 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 110642685 Common - hypothetical lipoprotein YfhM precursor ECP_2525 79 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 110644727 Common - hypothetical protein ECP_4620 15 None None None 110644254 Common - CDP-diacylglycerol pyrophosphatase ECP_4127 19 COG2134 Cdh, CDP-diacylglycerol pyrophosphatase Lipid metabolism 110644746 Common - hypothetical protein ECP_4639 5 None None None 110640277 Pathogen - hypothetical protein ECP_0066 5 None None None 110641957 Common - hypothetical protein YebY precursor ECP_1783 11 None None None 110644732 Pathogen - hypothetical protein ECP_4625 1 None None None 110643209 Common glcF glycolate oxidase iron-sulfur subunit ECP_3055 175 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 110641102 Common - hypothetical protein YcaO ECP_0916 45 COG1944 COG1944, Uncharacterized conserved protein Function unknown 110640596 Common - hypothetical protein (EAL domain) ECP_0391 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110644502 Common groEL chaperonin GroEL ECP_4387 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 110643869 Common - UDP-galactose:(glucosyl) LPS alpha1,2-galactosyltransferase WaaT ECP_3726 31 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 110643997 Common - putative antirestriction protein ECP_3855 16 None None None 110640435 Common - hypothetical protein ECP_0227 22 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 110641692 Common - DNA-binding transcriptional activator MarA ECP_1514 125 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110642666 Pathogen - hypothetical protein ECP_2506 4 None None None 110643498 Common gatY tagatose-bisphosphate aldolase ECP_3347 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110642063 Common - hypothetical protein ECP_1891 61 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 110644769 Common - hypothetical protein ECP_4662 233 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 110643028 Common - putative chlorohydrolase/aminohydrolase ECP_2873 128 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 110643764 Common - hypothetical protein ECP_3617 66 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 110644017 Common - DNA-binding response regulator in two-component regulatory system wtih UhpB ECP_3875 185 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110641796 Common - hypothetical protein ECP_1622 6 None None None 110641208 Common - hypothetical protein YcdT ECP_1024 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 110641900 Common - methionine sulfoxide reductase B ECP_1726 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 110640860 Common - hypothetical protein ECP_0661 47 COG2921 COG2921, Uncharacterized conserved protein Function unknown 110641351 Common - minor capsid protein B ECP_1169 33 COG5511 COG5511, Bacteriophage capsid protein General function prediction only 110643558 Common rplD 50S ribosomal protein L4 ECP_3407 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 110644222 Common - putative aldose-1-epimerase ECP_4093 28 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 110640818 Common - ferric enterobactin transport protein FepE ECP_0619 19 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 110644366 Common - hypothetical lipoprotein YjbF precursor ECP_4245 12 None None None 110641464 Common - response regulator of RpoS ECP_1282 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110642928 Common - glucarate dehydratase ECP_2768 54 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110640469 Common - putative toxin YafO ECP_0262 6 None None None 110644208 Common glnG nitrogen regulation protein NR(I) ECP_4079 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110644360 Common - putative transcriptional regulator of sorbose uptake and utilization genes ECP_4239 67 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 110642668 Common - hypothetical protein YfgI ECP_2508 4 None None None 110643823 Common - hypothetical transcriptional regulator YiaJ ECP_3678 122 COG1414 IclR, Transcriptional regulator Transcription 110644161 Common - putative transcriptional regulator ECP_4030 100 COG1737 RpiR, Transcriptional regulators Transcription 110640972 Common - hypothetical protein ECP_0782 56 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 110643888 Common ligB NAD-dependent DNA ligase LigB ECP_3745 217 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 110642631 Common - ethanolamine utilization cobalamin adenosyltransferase ECP_2471 12 COG4812 EutT, Ethanolamine utilization cobalamin adenosyltransferase Amino acid transport and metabolism 110641775 Common - hypothetical protein ECP_1599 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 110643486 Common - hypothetical protein ECP_3335 2 None None None 110640321 Common - N-acetyl-anhydromuranmyl-L-alanine amidase ECP_0110 109 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 110642256 Common - colanic acid exporter ECP_2086 112 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 110641322 Common - exonuclease ECP_1140 13 None None None 110641536 Pathogen - hypothetical protein ECP_1354 1 None None None 110643737 Common - glutathione reductase ECP_3590 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 110644547 Common - predicted hydrolase ECP_4435 22 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 110642298 Common - galactitol utilization operon repressor ECP_2128 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110643516 Common - hypothetical amino-acid ABC transporter permease protein YhdY ECP_3365 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 110644278 Common - putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase ECP_4151 141 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 110644291 Common - predicted formate acetyltransferase 2 (pyruvate formate lyase II) ECP_4164 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 110644597 Common - soluble cytochrome precursor ECP_4485 11 COG3783 CybC, Soluble cytochrome b562 Energy production and conversion 110640900 Common - probable outer membrane protein YbfM ECP_0701 14 None None None 110641860 Common nadE NAD synthetase ECP_1686 141 COG0171 NadE, NAD synthase Coenzyme metabolism 110641128 Common - aminopeptidase N ECP_0944 160 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 110640476 Common - DNA-binding transcriptional regulator Crl ECP_0269 13 None None None 110643202 Common - hypothetical lipoprotein ECP_3048 1 None None None 110644417 Common - putative LrgB family regulator of murein hydrolase ECP_4298 81 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 110640916 Common - hypothetical protein ECP_0719 11 None None None 110643506 Common - putative methyltransferase ECP_3355 146 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 110643972 Common - hypothetical urea transporter ECP_3830 17 COG4413 Utp, Urea transporter Amino acid transport and metabolism 110644280 Common - putative cytoplasmic protein ECP_4153 7 None None None 110643375 Common - putative tagatose 6-phosphate kinase agaZ ECP_3222 35 COG4573 GatZ, Predicted tagatose 6-phosphate kinase Carbohydrate transport and metabolism 110640617 Common - IS putative transposase ECP_0413 137 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640649 Common aroL shikimate kinase II ECP_0447 198 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 110641284 Common - hypothetical protein ECP_1100 21 COG3150 COG3150, Predicted esterase General function prediction only 110643649 Common malQ 4-alpha-glucanotransferase ECP_3502 119 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 110644841 Common - hypothetical protein ECP_0843 40 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 110641126 Common - outer membrane protein F ECP_0940 39 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110641711 Common - hypothetical protein ECP_1533 6 None None None 110642104 Common - putative regulatory protein ECP_1932 35 COG3311 AlpA, Predicted transcriptional regulator Transcription 110642639 Common - hypothetical protein YffH ECP_2479 153 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 110643066 Common - hypothetical protein ECP_2911 86 COG2968 COG2968, Uncharacterized conserved protein Function unknown 110640852 Common - palmitoyl transferase for Lipid A ECP_0653 14 None None None 110640591 Common - choline dehydrogenase ECP_0386 89 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 110642930 Common - probable glucarate transporter ECP_2770 203 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643092 Common - galactose-proton symporter ECP_2937 203 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641975 Common znuA high-affinity zinc transporter periplasmic component ECP_1801 162 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 110642224 Common dacD D-alanyl-D-alanine carboxypeptidase ECP_2054 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 110644114 Common - dTDP-glucose 4,6-dehydratase ECP_3979 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 110643729 Common - hypothetical protein YhiN ECP_3582 135 COG2081 COG2081, Predicted flavoproteins General function prediction only 110640665 Common - acyl carrier protein phosphodiesterase ECP_0463 33 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 110640301 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ECP_0090 208 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 110640570 Common - putative aldo/keto reductase ECP_0365 198 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 110643001 Common - putative lipoprotein ECP_2846 14 None None None 110643615 Common - hypothetical protein YhfX ECP_3466 15 COG3457 COG3457, Predicted amino acid racemase Amino acid transport and metabolism 110644510 Common - outer membrane lipoprotein Blc ECP_4395 68 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 110642220 Common - hypothetical protein ECP_2050 5 COG4917 EutP, Ethanolamine utilization protein Amino acid transport and metabolism 110643308 Common - O-sialoglycoprotein endopeptidase ECP_3154 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 110642225 Common sbcB exonuclease I ECP_2055 51 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 110642894 Common - sulfate adenylyltransferase subunit 2 ECP_2734 138 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 110642992 Common - hypothetical protein ECP_2837 12 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 110642884 Common - protein-L-isoaspartate O-methyltransferase ECP_2724 18 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 110643368 Common garR tartronate semialdehyde reductase ECP_3215 178 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 110643657 Common glpE thiosulfate sulfurtransferase ECP_3510 100 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 110640374 Common - iron-hydroxamate transporter permease subunit ECP_0163 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110643639 Common greB transcription elongation factor GreB ECP_3492 201 COG0782 GreA, Transcription elongation factor Transcription 110644692 Pathogen - hypothetical protein ECP_4585 1 None None None 110644025 Common - putative sulfatase ECP_3883 94 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 110642141 Common - putative non-ribosomal peptide synthase ECP_1971 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110641082 Common clpS ATP-dependent Clp protease adaptor protein ClpS ECP_0896 122 COG2127 COG2127, Uncharacterized conserved protein Function unknown 110642579 Common - hypothetical protein ECP_2415 10 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 110643718 Common - nickel-binding periplasmic protein precursor ECP_3571 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 110642290 Common - hypothetical protein YegP ECP_2120 31 COG3422 COG3422, Uncharacterized conserved protein Function unknown 110644397 Common - succinyl-CoA synthetase alpha subunit ECP_4278 216 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 110643342 Common - putative fimbrial protein ECP_3189 7 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110640769 Common - hydroxypyruvate isomerase ECP_0569 83 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 110640872 Common - hypothetical protein ECP_0673 22 None None None 110640610 Common - propionate catabolism operon regulatory protein ECP_0406 171 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 110643090 Common - S-adenosylmethionine synthetase ECP_2935 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 110643099 Common - hypothetical protein YggR ECP_2944 214 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 110641588 Common - hypothetical protein YnbE (putative membrane protein) ECP_1408 28 None None None 110640605 Common - deaminase ECP_0400 66 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 110640337 Common - hypothetical protein ECP_0126 21 COG3112 COG3112, Uncharacterized protein conserved in bacteria Function unknown 110643073 Common - putative inner membrane protein ECP_2918 18 None None None 110640455 Common - hypothetical protein ECP_0248 22 None None None 110641375 Common - putative acetyltransferase protein ECP_1193 11 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 110643097 Common - hypothetical protein ECP_2942 130 COG1678 COG1678, Putative transcriptional regulator Transcription 110644393 Common kgd alpha-ketoglutarate decarboxylase ECP_4274 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 110640723 Common - acriflavine resistance protein B ECP_0523 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110642743 Common - predicted methyltransferase ECP_2583 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 110643817 Common - xylose operon regulatory protein ECP_3672 121 COG1609 PurR, Transcriptional regulators Transcription 110643779 Common - cellulose synthase regulator protein ECP_3632 20 None None None 110642918 Common - hypothetical membrane spanning protein ECP_2758 23 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 110641387 Common - hypothetical protein ECP_1205 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110642550 Common lacY galactoside permease ECP_2386 20 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 110642830 Common - anaerobic nitric oxide reductase flavorubredoxin ECP_2670 125 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 110644719 Common - putative transposase OrfA protein of insertion sequence IS629 ECP_4612 27 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643301 Common - undecaprenyl pyrophosphate phosphatase ECP_3147 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 110640493 Common - hypothetical protein ECP_0287 20 None None None 110642941 Common - L-fuculose phosphate aldolase ECP_2783 157 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 110643495 Common - putative sugar uptake ABC transporter permease protein ECP_3344 118 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 110644548 Common - hypothetical transcriptional regulator YjfQ ECP_4436 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110641697 Common - O-acetylserine/cysteine export protein ECP_1519 174 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 110644041 Common - hypothetical protein ECP_3899 30 COG3753 COG3753, Uncharacterized protein conserved in bacteria Function unknown 110640508 Common - TonB dependent outer membrane siderophore receptor ECP_0302 115 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110644352 Common - hypothetical protein YjbB ECP_4231 80 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 110642371 Common - putative Na+ dependent nucleoside transporter-family protein ECP_2201 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 110643467 Common - cytochrome d ubiquinol oxidase subunit III ECP_3316 22 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 110642998 Common - dinucleoside polyphosphate hydrolase ECP_2843 115 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 110642216 Common - hypothetical protein YeeT ECP_2046 4 None None None 110644535 Common - transcriptional repressor NsrR ECP_4423 159 COG1959 COG1959, Predicted transcriptional regulator Transcription 110643989 Common - hypothetical protein ECP_3847 5 None None None 110641855 Common - DNA-binding transcriptional dual regulator ECP_1681 91 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110642170 Common - hypothetical protein ECP_2000 119 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 110640937 Common - succinyl-CoA synthetase subunit alpha ECP_0740 216 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 110640625 Common - glutathione-dependent formaldehyde dehydrogenase ECP_0421 199 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 110642388 Common - hypothetical protein YejA precursor ECP_2218 171 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 110644410 Common - redox-sensitive transcriptional activator SoxR ECP_4291 89 COG0789 SoxR, Predicted transcriptional regulators Transcription 110641525 Common - transcriptional regulator, TetR family ECP_1343 52 COG1309 AcrR, Transcriptional regulator Transcription 110643700 Common - Leu/Ile/Val-binding protein precursor ECP_3553 140 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 110642125 Common - shikimate transporter ECP_1954 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642447 Common glpT sn-glycerol-3-phosphate transporter ECP_2282 85 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110642158 Common - hypothetical protein ECP_1988 86 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 110640800 Common - sensor kinase CusS ECP_0601 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110644591 Common - hypothetical ABC transporter permease protein YtfT ECP_4479 107 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 110643175 Common - capsule polysaccharide export inner-membrane protein KpsE ECP_3021 44 COG3524 KpsE, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 110641604 Pathogen - hypothetical protein ECP_1424 1 None None None 110640981 Common - predicted methyltransferase ECP_0791 171 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110643253 Common - putative regulatory protein, GntR family ECP_3099 113 COG2186 FadR, Transcriptional regulators Transcription 110641318 Common - excisionase ECP_1136 2 None None None 110640684 Common - ThiJ protein ECP_0484 88 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 110642093 Pathogen - hypothetical protein ECP_1921 1 None None None 110644214 Common - putative membrane protein YihN ECP_4085 33 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110642045 Common fliG flagellar motor switch protein G ECP_1873 123 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 110641782 Common - putative DNA-binding transcriptional regulator ECP_1606 163 COG0583 LysR, Transcriptional regulator Transcription 110641927 Common - hypothetical protein YoaC (putative cytoplasmic protein) ECP_1753 6 None None None 110643755 Common - stress-response and acid-resistance protein ECP_3608 4 None None None 110641218 Common - curlin minor subunit ECP_1034 17 None None None 110643165 Common - hypothetical protein ECP_3011 23 None None None 110642533 Common - chorismate synthase ECP_2368 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 110642023 Common - hypothetical protein ECP_1851 88 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 110640808 Common - dihydropteridine reductase ECP_0609 63 COG0778 NfnB, Nitroreductase Energy production and conversion 110641296 Common - NAD-dependent deacetylase ECP_1114 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 110643640 Common - protein YhgF (S1 RNA binding domain) ECP_3493 214 COG2183 Tex, Transcriptional accessory protein Transcription 110642316 Common - hypothetical protein YehA precursor ECP_2146 3 None None None 110641789 Common - hypothetical protein ECP_1615 13 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 110642565 Pathogen - hypothetical protein ECP_2401 1 None None None 110640368 Common - 2'-5' RNA ligase ECP_0157 87 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 110640528 Pathogen - hypothetical protein ECP_0323 1 None None None 110643520 Common aroE shikimate 5-dehydrogenase ECP_3369 219 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 110644779 Common - hypothetical protein ECP_4672 49 COG2733 COG2733, Predicted membrane protein Function unknown 110643460 Common - transcriptional regulator NanR ECP_3309 126 COG2186 FadR, Transcriptional regulators Transcription 110641500 Pathogen - hypothetical protein ECP_1318 1 None None None 110644054 Common - hypothetical protein ECP_3912 8 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 110642853 Common - hydrogenase isoenzymes formation protein HypE ECP_2693 138 COG0309 HypE, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 110641135 Common - hypothetical protein ECP_0951 17 None None None 110643561 Common - chromosome replication protein PioO ECP_3410 2 None None None 110640418 Common metQ DL-methionine transporter substrate-binding subunit ECP_0207 101 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 110644027 Common - hypothetical transcriptional regulator YidL ECP_3885 4 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110641111 Common - lipid transporter ATP-binding/permease protein ECP_0925 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 110641922 Common - long-chain-fatty-acid--CoA ligase ECP_1748 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110643925 Common - putative F17-like fimbrial usher ECP_3783 39 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110640399 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase ECP_0188 188 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 110642285 Common - multidrug efflux system subunit MdtB ECP_2115 181 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110642479 Common - hypothetical protein YfbM ECP_2314 7 None None None 110644340 Common - phosphoribosylamine--glycine ligase ECP_4218 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 110640258 Common - hypothetical metabolite transport protein YaaU ECP_0045 163 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643024 Common - hypothetical protein YqeB ECP_2869 119 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 110642538 Common - hypothetical fimbrial-like protein YfcQ precursor ECP_2373 9 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640261 Common folA dihydrofolate reductase ECP_0048 146 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 110640905 Common - LexA regulated protein ECP_0706 21 None None None 110642207 Common - hypothetical protein ECP_2037 5 COG3596 COG3596, Predicted GTPase General function prediction only 110643418 Common hflB ATP-dependent metalloprotease ECP_3265 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 110643968 Common - hemolysin-activating lysine-acyltransferase HlyC ECP_3826 15 COG2994 HlyC, ACP:hemolysin acyltransferase (hemolysin-activating protein) Posttranslational modification, protein turnover, chaperones 110641649 Common - nitrite extrusion protein 2 ECP_1471 79 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 110642111 Common - putative inner membrane ABC-transporter (YbtP) ECP_1940 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 110643963 Pathogen - hypothetical protein ECP_3821 3 None None None 110644756 Common - type-1 fimbrial major subunit ECP_4649 21 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643408 Common rbfA ribosome-binding factor A ECP_3255 174 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 110642173 Common - hypothetical protein ECP_2003 5 None None None 110640471 Common - hypothetical protein ECP_0264 120 COG1690 RtcB, Uncharacterized conserved protein Function unknown 110640603 Common - hypothetical protein YahG (DUF1116 domain) ECP_0398 17 None None None 110644560 Common rplI 50S ribosomal protein L9 ECP_4448 211 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 110641722 Common - multidrug efflux system protein MdtJ ECP_1544 141 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110641395 Common - hypothetical protein ECP_1213 1 None None None 110644283 Common - peroxidase/catalase HPI ECP_4156 98 COG0376 KatG, Catalase (peroxidase I) Inorganic ion transport and metabolism 110640793 Common - putative DNA integration/recombination/invertion protein ECP_0594 11 None None None 110640864 Common - penicillin-binding protein 2 ECP_0665 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 110640814 Common - ferrienterobactin receptor precursor ECP_0615 112 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110641178 Common - cytochrome c-type protein TorC ECP_0994 57 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 110641334 Common - hypothetical protein ECP_1152 2 None None None 110644378 Common ubiA 4-hydroxybenzoate octaprenyltransferase ECP_4257 166 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 110642923 Common - toxin ChpA ECP_2763 48 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 110642264 Common - putative colanic acid biosynthesis acetyltransferase WcaF ECP_2094 135 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 110643293 Common - putative membrane protein YqiJ ECP_3139 11 None None None 110642521 Common - hypothetical protein ECP_2356 172 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 110643828 Common - putative DedA family, membrane protein YiaN ECP_3683 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 110642688 Common - aminopeptidase B ECP_2528 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 110641448 Common chaB cation transport regulator ECP_1266 22 COG4572 ChaB, Putative cation transport regulator General function prediction only 110642842 Common - formate hydrogenlyase-3 component G ECP_2682 192 COG3260 COG3260, Ni,Fe-hydrogenase III small subunit Energy production and conversion 110644488 Common - lysyl-tRNA synthetase ECP_4373 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 110644574 Common - D-alanine/D-serine/glycine permease ECP_4462 173 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110641446 Common - hypothetical protein ECP_1264 3 None None None 110640926 Common - hypothetical protein ECP_0729 2 None None None 110641379 Common - truncated isocitrate dehydrogenase (NADP) ECP_1197 67 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 110640878 Common - outer membrane protein ECP_0679 41 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 110642540 Common - hypothetical fimbrial chaperone YfcS precursor ECP_2375 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110644558 Common - primosomal replication protein N ECP_4446 25 COG2965 PriB, Primosomal replication protein N DNA replication, recombination, and repair 110640897 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2 ECP_0698 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 110644075 Common - F0F1 ATP synthase subunit alpha ECP_3933 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 110642706 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YphC ECP_2546 205 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110642391 Common - hypothetical ABC transporter ATP-binding protein YejF ECP_2221 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 110644124 Common - arylsulfatase ECP_3993 67 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 110640357 Common - protein YadK ECP_0146 4 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640236 Common - bifunctional riboflavin kinase/FMN adenylyltransferase ECP_0023 211 COG0196 RibF, FAD synthase Coenzyme metabolism 110640316 Common - guanosine 5'-monophosphate oxidoreductase ECP_0105 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 110641576 Pathogen - hypothetical protein ECP_1396 1 None None None 110642098 Pathogen - hypothetical protein ECP_1926 3 None None None 110640467 Common - DNA polymerase IV ECP_0260 183 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 110642276 Common - uridine kinase ECP_2106 99 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 110642116 Common - yersiniabactin biosynthetic protein YbtT ECP_1945 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 110640739 Common - putative cation:proton antiport protein ECP_0539 215 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 110641663 Common - cAMP phosphodiesterase ECP_1485 184 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110642557 Common - multidrug resistance protein K ECP_2393 144 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110642079 Common - hypothetical protein ECP_1907 19 COG3443 COG3443, Predicted periplasmic or secreted protein General function prediction only 110644233 Common - formate dehydrogenase-O subunit gamma ECP_4104 71 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 110642437 Common - hypothetical protein YfaT precursor ECP_2272 13 COG3234 COG3234, Uncharacterized protein conserved in bacteria Function unknown 110643081 Common - PTS system, mannitol (cryptic)-specific IIBC component ECP_2926 41 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 110643528 Common trkA potassium transporter peripheral membrane component ECP_3377 152 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 110641938 Common - hypothetical protein ECP_1764 67 COG1971 COG1971, Predicted membrane protein Function unknown 110642398 Common - hypothetical protein YejL ECP_2228 21 COG3082 COG3082, Uncharacterized protein conserved in bacteria Function unknown 110641945 Common - transcriptional regulator KdgR ECP_1771 123 COG1414 IclR, Transcriptional regulator Transcription 110642057 Common - colanic acid capsular biosynthesis activation protein A ECP_1885 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110641665 Common - hypothetical lipoprotein YddW precursor ECP_1487 40 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 110643379 Common - putative phosphotransferase system enzyme subunit (AgaF) ECP_3226 59 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 110640328 Pathogen - uropathogenic specific protein ECP_0117 2 None None None 110644505 Common - hypothetical protein YjeK (radical SAM superfamily) ECP_4390 126 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 110642083 Common - PilV-like protein ECP_1911 13 None None None 110644573 Common - peptidyl-prolyl cis-trans isomerase ECP_4461 146 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 110643934 Pathogen - hypothetical protein ECP_3792 1 None None None 110642606 Common cysW sulfate/thiosulfate transporter permease subunit ECP_2446 224 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 110642462 Common - undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase ECP_2297 206 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110642837 Common - cryptic 6-phospho-beta-glucosidase ECP_2677 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 110641239 Common - predicted lipoprotein ECP_1055 19 None None None 110642968 Common - hypothetical protein ECP_2813 6 None None None 110642280 Common - hypothetical protein YegI ECP_2110 18 COG4248 COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains General function prediction only 110642777 Common - hypothetical protein ECP_2617 59 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 110643947 Common - hypothetical protein ECP_3805 44 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642076 Common - hypothetical protein ECP_1904 9 None None None 110644383 Common - zinc uptake transcriptional repressor ECP_4264 136 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 110641434 Common - peptidyl-tRNA hydrolase ECP_1252 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 110644336 Common - hypothetical protein YjaH ECP_4214 10 None None None 110644006 Pathogen - hypothetical protein ECP_3864 1 None None None 110640495 Pathogen - hypothetical protein ECP_0289 1 None None None 110641633 Common - glutathione S-transferase ECP_1455 4 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110642484 Common - NADH dehydrogenase subunit J ECP_2319 90 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 110641761 Common - hypothetical protein ECP_1585 11 COG3895 COG3895, Predicted periplasmic protein General function prediction only 110641486 Common - outer membrane protein W ECP_1304 71 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 110644643 Common - PapK fimbrial adapter precursor ECP_4536 8 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641992 Common - hypothetical protein ECP_1820 20 COG3102 COG3102, Uncharacterized protein conserved in bacteria Function unknown 110642596 Common - cell division protein ZipA ECP_2436 44 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 110643583 Common rpsL 30S ribosomal protein S12 ECP_3432 242 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 110640828 Common - hypothetical protein ECP_0629 71 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 110644035 Common - 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratase ECP_3893 115 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110644738 Common - putative DNA repair protein ECP_4631 173 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 110640795 Common - hypothetical protein YbcY precursor ECP_0596 11 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110644191 Common - Xaa-Pro dipeptidase ECP_4060 183 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 110644772 Common - hypothetical protein ECP_4665 11 COG0700 SpmB, Uncharacterized membrane protein Function unknown 110643031 Common - putative transmembrane transport protein ECP_2876 126 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 110644552 Common - L-ascorbate-specific enzyme IIA component of PTS ECP_4440 49 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 110643248 Common - probable alcohol dehydrogenase ECP_3094 168 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 110641541 Common - peripheral inner membrane phage-shock protein ECP_1359 8 None None None 110642017 Common - hypothetical protein ECP_1845 8 None None None 110643415 Common secG preprotein translocase subunit SecG ECP_3262 126 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 110641005 Common - putative malate/L-lactate dehydrogenase ECP_0815 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 110640577 Common - pyridine nucleotide-disulfide oxidoreductase ECP_0372 238 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 110640746 Common - hypothetical protein ECP_0546 51 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 110640734 Common - heat shock protein 90 ECP_0534 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 110644245 Common - superoxide dismutase ECP_4118 207 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 110641618 Common - hypothetical protein YdcQ ECP_1440 9 None None None 110641399 Common - cell division inhibitor MinD ECP_1217 148 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 110644664 Pathogen - hypothetical protein ECP_4557 1 None None None 110643851 Common cysE serine acetyltransferase ECP_3708 212 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 110641806 Common - hypothetical protein YdiH ECP_1632 7 None None None 110641119 Common - condesin subunit F ECP_0933 19 COG3006 MukF, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 110640559 Common - hypothetical protein YagX precursor ECP_0354 10 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110642501 Common - phosphate acetyltransferase ECP_2336 168 COG0280 Pta, Phosphotransacetylase Energy production and conversion 110641652 Common - formate dehydrogenase, nitrate-inducible, major subunit ECP_1474 169 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110642123 Common - hypothetical protein YeeL ECP_1952 12 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 110641724 Common pntB pyridine nucleotide transhydrogenase ECP_1546 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 110640410 Common - hypothetical protein YaeQ ECP_0199 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 110643458 Common - putative sialic acid transporter ECP_3307 208 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641560 Common - putative mandelate racemase/muconate lactonizing enzyme family protein ECP_1378 106 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110640708 Common - hypothetical transcriptional regulator protein YbaO AsnC familiy ECP_0508 151 COG1522 Lrp, Transcriptional regulators Transcription 110641914 Common - hypothetical protein YoaF ECP_1740 18 COG3042 Hlx, Putative hemolysin General function prediction only 110644584 Common - methionine sulfoxide reductase A ECP_4472 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 110641096 Common - anaerobic dimethyl sulfoxide reductase, subunit C ECP_0910 21 COG3302 DmsC, DMSO reductase anchor subunit General function prediction only 110641883 Common - putative TPR repeat protein ECP_1709 108 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 110641600 Common - aldehyde dehydrogenase A ECP_1420 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110642288 Common - signal transduction histidine-protein kinase BaeS ECP_2118 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110643113 Common - nucleoside permease NupG ECP_2958 48 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 110641497 Common - putative membrane protein YciQ ECP_1315 10 None None None 110641064 Common - arginine-binding periplasmic protein 1 precursor ECP_0878 181 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 110641749 Common - hypothetical membrane protein YdgK ECP_1571 9 None None None 110640272 Common - DNA polymerase II ECP_0061 64 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 110641148 Common - SOS cell division inhibitor ECP_0964 10 COG5404 SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation Cell division and chromosome partitioning 110643986 Common - putative IS orf ECP_3844 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640770 Common - 2-hydroxy-3-oxopropionate reductase ECP_0570 186 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 110640884 Common ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase ECP_0685 128 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 110642355 Common - putative oxidoreductase ECP_2185 195 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 110644452 Common - ribose 1,5-bisphosphokinase ECP_4337 65 COG3709 COG3709, Uncharacterized component of phosphonate metabolism Inorganic ion transport and metabolism 110644083 Common - flavodoxin ECP_3941 79 COG0716 FldA, Flavodoxins Energy production and conversion 110642152 Common - probable 4'-phosphopantetheinyl transferase ECP_1982 57 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 110641999 Common - chemotaxis regulator transmitting signal to flagellar motor component ECP_1827 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110642420 Common - hypothetical ABC transporter ECP_2253 249 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 110643518 Common - putative transferase ECP_3367 188 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 110644832 Common - Trp operon repressor ECP_4779 22 COG2973 TrpR, Trp operon repressor Transcription 110643216 Common - putative acyl carrier protein ECP_3062 6 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110641146 Common - outer membrane protein A ECP_0962 152 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 110644466 Pathogen - hypothetical protein ECP_4351 1 None None None 110642360 Common - DNA-binding transcriptional repressor ECP_2190 128 COG1609 PurR, Transcriptional regulators Transcription 110641976 Common znuC high-affinity zinc transporter ATPase ECP_1802 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 110642849 Common hypA hydrogenase nickel incorporation protein ECP_2689 83 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 110640787 Common cysS cysteinyl-tRNA synthetase ECP_0587 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110643673 Common - glycogen branching enzyme ECP_3526 149 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 110643157 Pathogen - hypothetical protein ECP_3003 1 None None None 110640512 Common - putative glycosyl transferase ECP_0306 21 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 110644063 Common - beta-glucoside-specific PTS system components IIABC ECP_3921 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110644449 Common - hypothetical protein ECP_4334 3 None None None 110642339 Common - hypothetical ABC transporter permease protein YehY ECP_2169 101 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 110642401 Common - hypothetical protein ECP_2232 2 None None None 110642956 Common - putative cytoplasmic protein ECP_2801 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 110644047 Common - ribonuclease P protein component ECP_3905 67 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 110642334 Common - hypothetical protein YehU precursor (putative two-component system sensor kinase) ECP_2164 105 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 110640360 Common - predicted outer membrane usher protein ECP_0149 27 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110643183 Pathogen - hypothetical protein ECP_3029 1 COG4099 COG4099, Predicted peptidase General function prediction only 110642900 Common - probable electron transfer flavoprotein-quinone oxidoreductase YgcN ECP_2740 108 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 110644399 Common - hypothetical malate/L-lactate dehydrogenase YbiC ECP_4280 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 110641706 Common - starvation sensing protein RspB ECP_1528 212 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110641983 Common ntpA dATP pyrophosphohydrolase ECP_1809 38 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 110641266 Common - fatty acid/phospholipid synthesis protein ECP_1082 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 110641931 Common - L-serine dehydratase 1 ECP_1757 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 110642166 Common - hypothetical protein ECP_1996 17 COG1475 Spo0J, Predicted transcriptional regulators Transcription 110640986 Common - molybdenum cofactor biosynthesis protein B ECP_0796 187 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 110642671 Common xseA exodeoxyribonuclease VII large subunit ECP_2511 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 110643723 Common - nickel responsive regulator ECP_3576 59 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 110641681 Common - trans-aconitate 2-methyltransferase ECP_1503 77 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 110643055 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase ECP_2900 122 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 110643688 Common - hypothetical protein ECP_3541 6 None None None 110643908 Common - putative type II 5-cytosoine methyltransferase ECP_3766 136 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 110640246 Common - hypothetical protein YaaV ECP_0033 1 None None None 110643856 Common - phosphoglyceromutase ECP_3713 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 110640846 Common - citrate lyase beta chain ECP_0647 110 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 110640481 Common - hypothetical protein ECP_0275 2 None None None 110640671 Common - hypothetical protein ECP_0469 26 None None None 110642943 Common fucI L-fucose isomerase ECP_2785 19 COG2407 FucI, L-fucose isomerase and related proteins Carbohydrate transport and metabolism 110642763 Common - hypothetical protein ECP_2603 6 None None None 110640560 Common - hypothetical protein YagY precursor ECP_0355 6 None None None 110641473 Common oppB oligopeptide transporter permease ECP_1291 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110643696 Common livM leucine/isoleucine/valine transporter permease subunit ECP_3549 127 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 110640282 Common tbpA thiamin transporter substrate binding subunit ECP_0071 53 COG4143 TbpA, ABC-type thiamine transport system, periplasmic component Coenzyme metabolism 110642246 Common - UDP-glucose 4-epimerase ECP_2076 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 110644701 Common - quaternary ammonium compound-resistance protein QacE ECP_4594 133 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110640519 Common - TonB-dependent receptor ECP_0314 84 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110640581 Common - hypothetical protein ECP_0376 70 COG1556 COG1556, Uncharacterized conserved protein Function unknown 110641372 Common - iron transport protein, inner membrane component ECP_1190 187 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 110641591 Common - hypothetical oxidoreductase YdbC ECP_1411 163 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 110644202 Common - hypothetical protein ECP_4073 2 None None None 110644186 Common rfaH transcriptional activator RfaH ECP_4055 39 COG0250 NusG, Transcription antiterminator Transcription 110641867 Common - arginine succinyltransferase ECP_1693 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 110644182 Common tatA twin argininte translocase protein A ECP_4051 51 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 110643895 Common - putative purine permease YicE ECP_3752 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 110644272 Common rpmE 50S ribosomal protein L31 ECP_4145 182 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 110643667 Common - putative fimbrial chaperone protein ECP_3520 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110644702 Common - quaternary ammonium compound-resistance protein QacE ECP_4595 104 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110643205 Common - hypothetical protein ECP_3051 1 None None None 110643447 Common - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) ECP_3294 129 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 110640229 Pathogen - hypothetical protein ECP_0016 1 None None None 110642808 Common - predicted inner membrane protein ECP_2648 8 None None None 110640964 Pathogen - hypothetical protein ECP_0774 1 None None None 110642987 Common RecB exonuclease V subunit beta ECP_2832 218 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 110644514 Common - fumarate reductase iron-sulfur subunit ECP_4399 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 110644699 Common - DNA-binding transcriptional dual regulator ECP_4592 181 COG0583 LysR, Transcriptional regulator Transcription 110641778 Common - putative transport transmembrane protein ECP_1602 159 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644279 Common - putative 5'-nucleotidase ECP_4152 143 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 110640392 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase ECP_0181 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 110642416 Common - ferredoxin-type protein ECP_2249 57 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 110643041 Common - thiol:disulfide interchange protein DsbC ECP_2886 66 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 110641509 Common - hypothetical protein ECP_1327 5 None None None 110641565 Common - hypothetical protein YnaI ECP_1385 180 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110642715 Common - nitrogen regulatory protein P-II 1 ECP_2555 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 110641808 Common - putative oxidase (hypothetical protein YdiJ) ECP_1634 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 110643140 Pathogen - hypothetical protein ECP_2986 1 None None None 110640928 Common gltA type II citrate synthase ECP_0731 194 COG0372 GltA, Citrate synthase Energy production and conversion 110641063 Common - arginine transporter permease subunit ArtQ ECP_0877 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 110643426 Common rplU 50S ribosomal protein L21 ECP_3273 215 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 110641467 Common - thymidine kinase ECP_1285 91 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 110644708 Common - hypothetical protein ECP_4601 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 110644763 Pathogen - hypothetical protein ECP_4656 1 None None None 110643555 Common rpsS 30S ribosomal protein S19 ECP_3404 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 110641515 Common - hypothetical protein ECP_1333 73 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 110642751 Common - putative transposase ECP_2591 18 None None None 110644415 Common - hypothetical protein ECP_4296 137 COG0583 LysR, Transcriptional regulator Transcription 110641737 Common - putative outer membrane porin protein ECP_1559 3 None None None 110643078 Common - putative DNA-binding transcriptional regulator ECP_2923 16 COG3722 MtlR, Transcriptional regulator Transcription 110641184 Common - curved DNA-binding protein CbpA ECP_1000 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 110642194 Common - transposase/IS protein ECP_2024 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110644497 Common - anaerobic C4-dicarboxylate transporter ECP_4382 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 110643956 Common - CS12 fimbria outer membrane usher protein precursor ECP_3814 32 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110641226 Common - glucosyltransferase MdoH ECP_1042 54 COG2943 MdoH, Membrane glycosyltransferase Cell envelope biogenesis, outer membrane 110640379 Common - periplasmic binding protein ECP_0168 98 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 110641130 Common ssuC alkanesulfonate transporter permease subunit ECP_0946 190 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 110641538 Common - phage shock protein ECP_1356 86 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 110641193 Common - hypothetical protein YcdK ECP_1009 181 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 110641771 Common - hypothetical transcriptional regulator YdhM ECP_1595 81 COG1309 AcrR, Transcriptional regulator Transcription 110642526 Common - hypothetical protein ECP_2361 27 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641677 Common - putative truncated fimbrial usher protein ECP_1499 28 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110643544 Common rplF 50S ribosomal protein L6 ECP_3393 226 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 110644264 Common - hypothetical protein YiiU ECP_4137 21 COG3074 COG3074, Uncharacterized protein conserved in bacteria Function unknown 110641252 Common flgE flagellar hook protein FlgE ECP_1068 127 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 110643430 Common - putative transcriptional regulator (BolA family) ECP_3277 72 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 110641405 Common - predicted isomerase/hydrolase ECP_1223 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 110641890 Common - nicotinamidase/pyrazinamidase ECP_1716 125 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 110643902 Common - PTS system, fructose-like-2 IIB component 1 ECP_3759 68 COG1445 FrwB, Phosphotransferase system fructose-specific component IIB Carbohydrate transport and metabolism 110641436 Common - putative sulfate transporter YchM ECP_1254 156 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 110643655 Common - DNA-binding transcriptional repressor ECP_3508 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110643481 Common - ribonuclease G ECP_3330 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 110643228 Common - hypothetical protein ECP_3074 48 None None None 110642753 Common - IS putative transposase ECP_2593 137 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643975 Common - putative transposase ECP_3833 20 None None None 110644472 Common - predicted metal dependent hydrolase ECP_4357 64 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110643574 Common - transposase for insertion sequence IS100 ECP_3423 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641847 Common - hypothetical protein YniB (putative membrane protein) ECP_1673 13 None None None 110644159 Common - PTS system, glucose-specific IIBC component ECP_4028 50 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110642784 Common gabD succinate-semialdehyde dehydrogenase I ECP_2624 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110643977 Common - possible AraC-family transcriptional regulator ECP_3835 60 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110643571 Common - probable general secretion pathway protein K ECP_3420 32 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 110643603 Common - peptidyl-prolyl cis-trans isomerase A (rotamase A) ECP_3454 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 110644819 Common deoA thymidine phosphorylase ECP_4766 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 110641364 Common - minor tail protein L ECP_1182 14 COG4672 gp18, Phage-related protein Function unknown 110641940 Common - cold shock-like protein cspC ECP_1766 181 COG1278 CspC, Cold shock proteins Transcription 110644434 Common - putative ABC transporter transporter, ATP-binding protein ECP_4315 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 110640785 Common - UDP-2,3-diacylglucosamine hydrolase ECP_0585 79 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 110641109 Common ihfB integration host factor subunit beta ECP_0923 203 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 110641754 Common - electron transport complex protein RnfG ECP_1576 58 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 110640517 Common - hypothetical protein ECP_0312 24 None None None 110642021 Common - hypothetical protein YecH ECP_1849 13 None None None 110644834 Common - phosphoglycerate mutase ECP_4781 174 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 110644628 Common - prophage P4 integrase ECP_4521 104 COG0582 XerC, Integrase DNA replication, recombination, and repair 110643264 Common - possible AraC-family transcriptional regulator ECP_3110 31 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 110642542 Common - hypothetical fimbrial-like protein YfcV precursor ECP_2377 5 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110644051 Common - tryptophan permease TnaB ECP_3909 33 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110641451 Common - predicted invasin ECP_1269 14 None None None 110642307 Common - hypothetical protein YegU (putative hydrolase) ECP_2137 61 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 110640458 Common fadE acyl-CoA dehydrogenase ECP_0251 148 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 110641407 Common - truncated hemolysin E ECP_1225 2 None None None 110642921 Common - CTP synthetase ECP_2761 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 110643800 Common - predicted outer membrane lipoprotein ECP_3655 167 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 110643970 Common - alpha-hemolysin translocation ATP-binding protein HlyB ECP_3828 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 110644777 Common - R-phenyllactate dehydratase activator ECP_4670 65 COG1924 COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Lipid metabolism 110641163 Common - hydrogenase 1 b-type cytochrome subunit ECP_0979 45 COG1969 HyaC, Ni,Fe-hydrogenase I cytochrome b subunit Energy production and conversion 110640366 Common - DnaK transcriptional regulator DksA ECP_0155 119 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 110644712 Common - hypothetical protein ECP_4605 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110643061 Common - ribose-5-phosphate isomerase A ECP_2906 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 110640279 Common - DedA family integral membrane protein ECP_0068 149 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 110641093 Common - seryl-tRNA synthetase ECP_0907 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 110643438 Common - D-arabinose 5-phosphate isomerase ECP_3285 151 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 110642696 Common - DNA-binding transcriptional repressor ECP_2536 162 COG1959 COG1959, Predicted transcriptional regulator Transcription 110642095 Pathogen - hypothetical protein ECP_1923 3 None None None 110642559 Common - hybrid sensory histidine kinase in two-component regulatory system with EvgA ECP_2395 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110644748 Common - hypothetical protein ECP_4641 30 COG3440 COG3440, Predicted restriction endonuclease Defense mechanisms 110642341 Common - periplasmic beta-glucosidase precursor ECP_2171 129 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 110642128 Pathogen - hypothetical protein ECP_1957 1 None None None 110640256 Common - putative oxidoreductase FixC ECP_0043 134 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 110641228 Common - predicted lipoprotein ECP_1044 8 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 110644650 Pathogen - hypothetical protein ECP_4543 1 None None None 110641268 Common - malonyl CoA-acyl carrier protein transacylase ECP_1084 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 110640816 Common - hypothetical MbtH-like protein ECP_0617 26 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 110643102 Common - hypothetical protein ECP_2947 69 COG1872 COG1872, Uncharacterized conserved protein Function unknown 110644439 Common - multidrug efflux system protein MdtO ECP_4322 13 COG1289 COG1289, Predicted membrane protein Function unknown 110640639 Common - putative lipoprotein YaiW ECP_0437 18 None None None 110640697 Common tig trigger factor ECP_0497 216 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 110643276 Common - DNA topoisomerase IV subunit B ECP_3122 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 110641643 Common - N-hydroxyarylamine O-acetyltransferase ECP_1465 45 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 110644770 Common - putative DNA-binding transcriptional regulator ECP_4663 127 COG0583 LysR, Transcriptional regulator Transcription 110643173 Common - hypothetical protein ECP_3019 13 None None None 110643500 Common - putative sugar kinase, ribokinase family ECP_3349 150 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110641343 Common - endopeptidase ECP_1161 9 None None None 110643870 Common - UDP-glucose:(glucosyl) LPS alpha1,3-glucosyltransferase WaaO ECP_3727 32 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 110642873 Common - putative regulatory protein, DeoR family ECP_2713 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110643893 Common - ATP-dependent DNA helicase RecG ECP_3750 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 110644741 Common - hypothetical protein ECP_4634 8 None None None 110640725 Common - DNA-binding transcriptional repressor ECP_0525 69 COG1309 AcrR, Transcriptional regulator Transcription 110642771 Common - signal recognition particle protein ECP_2611 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 110641324 Pathogen - host-nuclease inhibitor protein Gam ECP_1142 4 None None None 110641917 Common - hypothetical protein YoaG (putative cytoplasmic protein) ECP_1743 5 None None None 110642657 Common - putative arsenate reductase ECP_2497 112 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 110642407 Common - cytochrome c-type biogenesis protein CcmD ECP_2238 4 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 110642326 Common - hypothetical protein YehL ECP_2156 53 COG0714 COG0714, MoxR-like ATPases General function prediction only 110641533 Common - peptide transport system permease protein SapB ECP_1351 218 COG4168 SapB, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 110642181 Common - putative transposase ECP_2011 34 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644479 Common - fumarate hydratase class I, anaerobic ECP_4364 146 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 110640219 Common - putative periplasmic protein YaaX ECP_0006 6 None None None 110641156 Common - hypothetical protein YccV ECP_0972 24 COG3785 COG3785, Uncharacterized conserved protein Function unknown 110642047 Common fliI flagellum-specific ATP synthase ECP_1875 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 110640422 Common dkgB 2,5-diketo-D-gluconate reductase B ECP_0213 185 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 110642708 Common - hypothetical ABC transporter ATP-binding protein YphE ECP_2548 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110643632 Common - putative hydrolase ECP_3485 39 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 110641032 Common - glutathione transporter ATP-binding protein ECP_0842 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 110642610 Common murQ N-acetylmuramic acid-6-phosphate etherase ECP_2450 83 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 110640539 Common - possible anti-restriction protein ECP_0334 16 None None None 110642266 Common - putative colanic acid polymerase ECP_2096 6 None None None 110640339 Common - spermidine synthase ECP_0128 126 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 110643316 Common - putrescine--2-oxoglutarate aminotransferase ECP_3163 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 110643809 Common - hypothetical protein YiaH ECP_3664 19 COG3274 COG3274, Uncharacterized protein conserved in bacteria Function unknown 110642239 Common - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein ECP_2069 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 110642812 Common - S-ribosylhomocysteinase ECP_2652 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 110644300 Common - argininosuccinate lyase ECP_4173 234 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 110641121 Common mukB cell division protein MukB ECP_0935 30 COG3096 MukB, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 110643255 Common - putative zinc-binding dehydrogenase ECP_3101 216 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110644066 Common - phosphate transporter subunit ECP_3924 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 110641694 Common celA 6-phospho-beta-glucosidase ECP_1516 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 110642798 Common - glutaredoxin-like protein ECP_2638 36 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 110640758 Common - putative thioredoxin YbbN protein ECP_0558 213 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 162138279 Common flgJ peptidoglycan hydrolase ECP_1073 70 COG3951 COG3951, Rod binding protein Cell envelope biogenesis, outer membrane / Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 110641620 Common - putative extracellular solute-binding protein YdcS precursor ECP_1442 113 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 110642760 Common pheA bifunctional chorismate mutase/prephenate dehydratase ECP_2600 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 110643337 Common - hexuronate transporter ECP_3184 111 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110641241 Common - multidrug resistance protein MdtH ECP_1057 104 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644527 Common mutL DNA mismatch repair protein ECP_4415 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 110641870 Common - hypothetical protein YdjX (hypothetical transmembrane protein) ECP_1696 38 COG0398 COG0398, Uncharacterized conserved protein Function unknown 110644426 Common - heme lyase subunit NrfE ECP_4307 116 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 110642019 Common - hypothetical protein YecR ECP_1847 5 None None None 110643221 Common - hypothetical protein ECP_3067 3 None None None 110641835 Common pheT phenylalanyl-tRNA synthetase subunit beta ECP_1661 245 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 110644538 Common - hypothetical protein YjfI ECP_4426 13 COG3789 COG3789, Uncharacterized protein conserved in bacteria Function unknown 110644637 Pathogen - hypothetical protein ECP_4530 1 None None None 110640753 Pathogen - hypothetical protein ECP_0553 2 None None None 110643665 Common - putative minor fimbrial subunit precursor ECP_3518 20 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641816 Common - putative acyl-CoA dehydrogenase ECP_1642 158 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 110643780 Common bcsA cellulose synthase catalytic subunit ECP_3633 121 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110641573 Common - hypothetical protein YdaL (putative Smr domain) ECP_1393 72 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 110640713 Common - acyl-CoA thioesterase II ECP_0513 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 110642471 Common - naphthoate synthase ECP_2306 178 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 110643395 Common - hypothetical protein ECP_3242 20 COG3787 COG3787, Uncharacterized protein conserved in bacteria Function unknown 110643797 Common - hypothetical protein YhjY ECP_3650 10 COG5571 COG5571, Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion Cell motility and secretion 110642457 Common - competence damage-inducible protein A ECP_2292 141 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 110640510 Common - putative esterase ECP_0304 24 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 110641231 Common - lipid A biosynthesis lauroyl acyltransferase ECP_1047 101 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 110640835 Common - hypothetical transcriptional regulator YbdO ECP_0636 117 COG0583 LysR, Transcriptional regulator Transcription 110644724 Common - putative transposase ECP_4617 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642346 Common - acetoin dehydrogenase ECP_2176 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110640482 Common - transposase for insertion sequence IS100 ECP_0276 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644616 Common - putative membrane protein YjgN ECP_4506 30 COG4269 COG4269, Predicted membrane protein Function unknown 110642839 Pathogen - hypothetical protein ECP_2679 3 None None None 110644130 Common cyaA adenylate cyclase ECP_3999 25 COG3072 CyaA, Adenylate cyclase Nucleotide transport and metabolism 110641858 Common - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB ECP_1684 29 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 110641840 Common - threonyl-tRNA synthetase ECP_1666 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110641818 Common - putative electron transfer flavoprotein YdiQ ECP_1644 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 110642232 Common hisG ATP phosphoribosyltransferase ECP_2062 204 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 110643553 Common rpsC 30S ribosomal protein S3 ECP_3402 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 110643531 Common zntR zinc-responsive transcriptional regulator ECP_3380 155 COG0789 SoxR, Predicted transcriptional regulators Transcription 110640584 Common - putative autotransporter ECP_0379 42 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 110640761 Common - hypothetical ABC transporter ECP_0561 246 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 110642673 Pathogen - putative outer membrane protein (SinI-like protein) ECP_2513 3 None None None 110640678 Common - thiamine monophosphate kinase ECP_0476 195 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 110643287 Common - hypothetical protein YgiD ECP_3133 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 110643080 Common - hypothetical protein YggP ECP_2925 109 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110643533 Common rplQ 50S ribosomal protein L17 ECP_3382 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 110642723 Common - putative DNA-binding transcriptional regulator ECP_2563 129 COG1737 RpiR, Transcriptional regulators Transcription 110641315 Common - transposase/IS protein ECP_1133 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110641828 Common - hypothetical protein ECP_1654 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 110644444 Common - allulose-6-phosphate 3-epimerase ECP_4327 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 110642902 Common - putative anti-terminator regulatory protein YgcP ECP_2742 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 110641973 Common - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase ECP_1799 84 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 110641833 Common - vtamin B12-transporter permease ECP_1659 191 COG4139 BtuC, ABC-type cobalamin transport system, permease component Coenzyme metabolism 110644316 Common secE preprotein translocase subunit SecE ECP_4194 68 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 110644429 Common gltP glutamate/aspartate:proton symporter ECP_4310 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 110643305 Common - tartrate dehydratase subunit alpha ECP_3151 121 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 110641626 Common - putative cytoplasmic protein ECP_1448 6 None None None 110641982 Common - hypothetical protein ECP_1808 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 110642977 Common - hypothetical protein ECP_2822 12 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 110643748 Common - coproporphyrinogen III oxidase ECP_3601 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 110643147 Common - hypothetical protein ECP_2993 4 None None None 110640449 Common - hypothetical protein ECP_0241 21 COG5351 COG5351, Uncharacterized protein conserved in bacteria Function unknown 110642859 Pathogen - hypothetical protein ECP_2699 2 None None None 110641590 Common - putative autotransporter/adhesin ECP_1410 168 None None None 110643238 Common - hypothetical protein YghW ECP_3084 8 None None None 110643681 Common - putative pirin-related protein ECP_3534 146 COG1741 COG1741, Pirin-related protein General function prediction only 110640372 Common - iron-hydroxamate transporter ATP-binding subunit ECP_0161 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 110644537 Common - 23S rRNA (guanosine-2'-O-)-methyltransferase ECP_4425 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 110642650 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase ECP_2490 204 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 110641475 Common oppD oligopeptide transporter ATP-binding component ECP_1293 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 110644609 Common - putative C4-dicarboxylate anaerobic carrier ECP_4497 38 COG1288 COG1288, Predicted membrane protein Function unknown 110643469 Common - serine endoprotease ECP_3318 221 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 110640335 Common - hypothetical integral membrane protein YacH ECP_0124 30 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 110642563 Common - formyl-coenzyme A transferase ECP_2399 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 110643071 Common - D-erythrose 4-phosphate dehydrogenase ECP_2916 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 110640918 Common - deoxyribodipyrimidine photolyase ECP_0721 133 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 110642490 Common - bifunctional NADH:ubiquinone oxidoreductase subunit C/D ECP_2325 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 110641075 Common - hypothetical protein ECP_0889 49 COG2431 COG2431, Predicted membrane protein Function unknown 110642512 Common - histidine transport system permease protein HisQ ECP_2347 120 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 110643991 Common - putative transposase ECP_3849 46 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643323 Common - hypothetical protein YgjJ precursor ECP_3170 4 None None None 110644795 Common - hypothetical protein YjjM ECP_4688 18 COG1802 GntR, Transcriptional regulators Transcription 110644146 Common - phospholipase A ECP_4015 52 COG2829 PldA, Outer membrane phospholipase A Cell envelope biogenesis, outer membrane 110643716 Common - hypothetical protein ECP_3569 194 COG0628 PerM, Predicted permease General function prediction only 110643819 Pathogen - hypothetical protein ECP_3674 1 None None None 110642337 Common - hypothetical ABC transporter permease protein YehW ECP_2167 144 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 110643131 Common - regulatory protein ECP_2977 49 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 110643744 Common - outer membrane hemin receptor ECP_3597 106 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110644512 Common - fumarate reductase subunit D ECP_4397 21 COG3080 FrdD, Fumarate reductase subunit D Energy production and conversion 110643366 Common - hypothetical protein ECP_3213 8 None None None 110643777 Common - cellulose synthase subunit BcsC ECP_3630 68 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 110642050 Common fliL flagellar basal body-associated protein FliL ECP_1878 34 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 110642218 Common - hypothetical protein YeeV ECP_2048 8 None None None 110643344 Common - putative DedA family, membrane protein ECP_3191 156 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 110641277 Common - glucose-specific PTS system IIBC components ECP_1093 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110642519 Common - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase ECP_2354 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 110643629 Common mrcA peptidoglycan synthetase ECP_3482 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 110644541 Common - putative membrane protein YjfL ECP_4429 29 COG3766 COG3766, Predicted membrane protein Function unknown 110642088 Pathogen - hypothetical protein ECP_1916 1 None None None 110643642 Common feoB ferrous iron transport protein B ECP_3495 179 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 110644354 Common - L-sorbose 1-phosphate reductase ECP_4233 52 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110643810 Common - hypothetical protein ECP_3665 13 COG4682 COG4682, Predicted membrane protein Function unknown 110643945 Common - hypothetical protein ECP_3803 10 None None None 110644097 Common - hypothetical protein ECP_3960 23 COG3085 COG3085, Uncharacterized protein conserved in bacteria Function unknown 110643620 Common - ribulose-phosphate 3-epimerase ECP_3471 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 110644212 Common - hypothetical transcriptional regulator YihL ECP_4083 63 COG2188 PhnF, Transcriptional regulators Transcription 110643385 Common - N-acetylgalactosamine-specific PTS system transporter subunit IID ECP_3232 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 110640615 Common codB cytosine permease ECP_0411 69 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 110644683 Common - hypothetical protein ECP_4576 7 None None None 110641007 Common - hypothetical protein ECP_0817 22 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 110641653 Common - formate dehydrogenase, nitrate-inducible, major subunit ECP_1475 166 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110643753 Common - putative Mg(2+) transport ATPase ECP_3606 119 COG1285 SapB, Uncharacterized membrane protein Function unknown 110640332 Common aceE pyruvate dehydrogenase subunit E1 ECP_0121 155 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 110643739 Common - arsenate reductase ECP_3592 109 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 110641925 Common - probable ATP-dependent helicase YoaA ECP_1751 144 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 110643231 Common - hydrogenase nickel incorporation protein HybF ECP_3077 93 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 110641783 Common - inner membrane transport protein YdhC ECP_1607 205 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110640636 Common - putative DNA-binding transcriptional regulator ECP_0434 7 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 110644342 Common - hypothetical protein ECP_4221 8 None None None 110640543 Common - hypothetical protein YeeV ECP_0338 8 None None None 110642832 Common - hydrogenase maturation protein HypF ECP_2672 117 COG0068 HypF, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 110642584 Common - hypothetical protein YfdC ECP_2420 6 None None None 110640706 Common - putative extracellular solute-binding protein ECP_0506 38 COG4533 COG4533, ABC-type uncharacterized transport system, periplasmic component General function prediction only 110644385 Common pspG phage shock protein G ECP_4266 9 None None None 110644694 Common - hypothetical protein ECP_4587 13 COG3311 AlpA, Predicted transcriptional regulator Transcription 110642577 Common - putative PTS system IIB component YpdH ECP_2413 66 COG1445 FrwB, Phosphotransferase system fructose-specific component IIB Carbohydrate transport and metabolism 110643446 Common - hypothetical protein ECP_3293 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 110640326 Pathogen - uropathogenic specific protein ECP_0115 2 None None None 110644037 Common - 2-dehydro-3-deoxygalactonokinase ECP_3895 41 COG3734 DgoK, 2-keto-3-deoxy-galactonokinase Carbohydrate transport and metabolism 110643163 Common - putative autotransporter ECP_3009 115 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110643883 Common pyrE orotate phosphoribosyltransferase ECP_3740 159 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 110644657 Common - putative transposase ECP_4550 114 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640802 Common - copper/silver efflux system outer membrane protein CusC ECP_0603 112 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110641543 Common - putative sucrose phosphorylase ECP_1361 127 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 110640598 Common - hypothetical membrane protein ECP_0393 12 None None None 110643397 Common - hypothetical acetyltransferase YhbS ECP_3244 93 COG3153 COG3153, Predicted acetyltransferase General function prediction only 110641304 Common - peptidase T ECP_1122 61 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 110643821 Common avtA valine--pyruvate transaminase ECP_3676 131 COG3977 COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase Amino acid transport and metabolism 110644362 Common - hypothetical protein ECP_4241 9 None None None 110641799 Common - hypothetical protein YnhG precursor ECP_1625 89 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 110644802 Common - hypothetical protein ECP_4695 53 COG2966 COG2966, Uncharacterized conserved protein Function unknown 110641968 Common - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase ECP_1794 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 110644602 Common treR trehalose repressor ECP_4490 125 COG1609 PurR, Transcriptional regulators Transcription 110641909 Common - hypothetical protein YeaK (putative cytoplasmic protein) ECP_1735 16 COG2606 EbsC, Uncharacterized conserved protein Function unknown 110642713 Pathogen - hypothetical protein ECP_2553 2 None None None 110643019 Common - hypothetical protein ECP_2864 231 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 110644228 Common - hypothetical protein ECP_4099 6 None None None 110643358 Common - L-serine dehydratase tdcG ECP_3205 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 110644019 Common - acetolactate synthase 1 regulatory subunit ECP_3877 124 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 110643474 Common - hypothetical protein YhcO ECP_3323 9 COG2732 COG2732, Barstar, RNAse (barnase) inhibitor Transcription 110644255 Common tpiA triosephosphate isomerase ECP_4128 227 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 110643026 Common - hypothetical protein YgfJ ECP_2871 32 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 110640862 Common - rare lipoprotein A ECP_0663 135 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 110641367 Common - host specificity protein J ECP_1185 18 COG4733 COG4733, Phage-related protein, tail component Function unknown 110643068 Common - mechanosensitive channel MscS ECP_2913 199 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110642862 Common - hypothetical protein ECP_2702 19 None None None 110642319 Common - hypothetical protein YehD precursor ECP_2149 4 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110642445 Common - hypothetical protein ECP_2280 7 None None None 110640344 Common - hypoxanthine phosphoribosyltransferase ECP_0133 150 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 110642383 Common - hypothetical oxidoreductase YeiQ ECP_2213 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 162138280 Common - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase ECP_0959 81 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 110641773 Common - glyoxalase I ECP_1597 128 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 110644367 Common - hypothetical protein YjbG precursor ECP_4246 15 None None None 110642899 Common - putative 6-pyruvoyl tetrahydrobiopterin synthase ECP_2739 126 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 110643999 Common - hypothetical protein ECP_3857 4 None None None 110642254 Common - putative colanic acid biosynthesis glycosyl transferase WcaL ECP_2084 213 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110643373 Common - hypothetical protein YhaV ECP_3220 21 None None None 110642038 Pathogen - hypothetical protein ECP_1866 1 None None None 110640939 Pathogen - hypothetical protein ECP_0742 1 None None None 110643471 Pathogen - hypothetical protein ECP_3320 2 None None None 110640295 Common mraW S-adenosyl-methyltransferase MraW ECP_0084 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 110641206 Common - hypothetical lipoprotein YcdR precursor ECP_1022 72 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 110643012 Common - acetyl-CoA acetyltransferase ECP_2857 183 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 110642633 Common - ethanolamine utilization protein EutP ECP_2473 18 COG4917 EutP, Ethanolamine utilization protein Amino acid transport and metabolism 110644788 Common - hypothetical protein YjiX ECP_4681 27 COG2879 COG2879, Uncharacterized small protein Function unknown 110643351 Common - putative glutathione S-transferase ECP_3198 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110643263 Common - putative binding protein ECP_3109 204 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 110641044 Common - multidrug translocase MmdfA ECP_0856 203 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642036 Common - hypothetical protein ECP_1864 30 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 110641906 Common - hypothetical protein ECP_1732 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 110642581 Common - manganese transport protein MntH ECP_2417 110 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 110642620 Common - ethanolamine utilization protein EutL ECP_2460 20 COG4816 EutL, Ethanolamine utilization protein Amino acid transport and metabolism 110643707 Common - hypothetical protein ECP_3560 8 None None None 110643613 Common - predicted hydrolase ECP_3464 35 COG1735 Php, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 110644163 Common - putative permease ECP_4032 52 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 110644116 Common - TDP-fucosamine acetyltransferase ECP_3981 14 None None None 110644339 Common - transcriptional regulatory protein ZraR ECP_4217 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110644236 Common - hypothetical protein ECP_4109 7 None None None 110642932 Common - tRNA pseudouridine synthase C ECP_2772 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 110640627 Common - hypothetical protein YaiO ECP_0423 2 None None None 110641686 Common - glutaminase ECP_1508 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 110640640 Common - putative membrane protein YaiY ECP_0438 6 None None None 110644020 Common - acetolactate synthase catalytic subunit ECP_3878 223 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 110642925 Common relA GDP/GTP pyrophosphokinase ECP_2765 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 110640667 Common tgt queuine tRNA-ribosyltransferase ECP_0465 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 110640854 Common - protein CrcB ECP_0655 188 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 110640767 Common - DNA-binding transcriptional repressor ECP_0567 122 COG1414 IclR, Transcriptional regulator Transcription 110640653 Common - hypothetical protein ECP_0451 52 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 110643508 Common - DNA-binding transcriptional regulator ECP_3357 79 COG1309 AcrR, Transcriptional regulator Transcription 110643484 Common - cell wall structural complex MreBCD transmembrane component MreC ECP_3333 124 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 110643126 Common - PixA protein ECP_2972 16 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640924 Common - endonuclease VIII ECP_0727 133 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 110643462 Common sspA stringent starvation protein A ECP_3311 111 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110643844 Common - hypothetical protein ECP_3701 13 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 110640226 Common - hypothetical protein ECP_0013 4 None None None 110641747 Common - beta-lactam resistance protein ECP_1569 3 None None None 110640683 Common - exodeoxyribonuclease VII small subunit ECP_0481 137 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 110641798 Common - major outer membrane lipoprotein precursor ECP_1624 19 COG4238 COG4238, Murein lipoprotein Cell envelope biogenesis, outer membrane 110642800 Common - ribonucleotide-diphosphate reductase subunit alpha ECP_2640 221 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 110642876 Common - putative aldolase ECP_2716 120 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 110641282 Common thiK thiamin kinase ECP_1098 15 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 110641597 Common - azoreductase ECP_1417 98 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 110641107 Common cmk cytidylate kinase ECP_0921 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 110643008 Common - putative racemase ECP_2853 80 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 110642065 Common - very short patch repair protein ECP_1893 71 COG3727 Vsr, DNA G:T-mismatch repair endonuclease DNA replication, recombination, and repair 110643703 Common - cell division protein FtsE ECP_3556 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 110642389 Common - hypothetical ABC transporter permease protein YejB ECP_2219 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 110640478 Common - gamma-glutamyl kinase ECP_0271 192 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 110643601 Common - cell filamentation protein Fic ECP_3452 37 COG2184 Fic, Protein involved in cell division Cell division and chromosome partitioning 110643313 Common - hypothetical protein YqjH (hypothetical siderophore-interacting protein) ECP_3160 59 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 110644240 Common - L-rhamnose isomerase ECP_4113 23 COG4806 RhaA, L-rhamnose isomerase Carbohydrate transport and metabolism 110642106 Common - hypothetical protein YeeI ECP_1934 57 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 110643306 Common - L(+)-tartrate dehydratase subunit beta ECP_3152 148 COG1838 FumA, Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain Energy production and conversion 110640506 Common - hypothetical protein ECP_0300 32 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110641678 Common - hypothetical transcriptional regulator protein ECP_1500 145 COG0583 LysR, Transcriptional regulator Transcription 110640765 Common - DNA-binding transcriptional activator of the allD operon ECP_0565 170 COG0583 LysR, Transcriptional regulator Transcription 110643320 Common ebgA cryptic beta-D-galactosidase subunit alpha ECP_3167 73 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 110643010 Common - 2-deoxy-D-gluconate 3-dehydrogenase ECP_2855 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110643017 Common - xanthine dehydrogenase subunit XdhC ECP_2862 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 110643513 Common - hypothetical protein ECP_3362 3 None None None 110643003 Common - hypothetical protein ECP_2848 76 None None None 110641791 Common - PhsC-like protein ECP_1617 16 COG4117 COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Energy production and conversion 110640826 Common - Isochorismatase ECP_0627 87 COG1535 EntB, Isochorismate hydrolase Secondary metabolites biosynthesis, transport, and catabolism 110643401 Common - hypothetical protein ECP_3248 112 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 110644408 Common - hypothetical protein YjcC (hypothetical signalling protein) ECP_4289 162 COG4943 COG4943, Predicted signal transduction protein containing sensor and EAL domains Signal transduction mechanisms 110642645 Common - succinyl-diaminopimelate desuccinylase ECP_2485 213 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 110643619 Common - phosphoglycolate phosphatase ECP_3470 216 COG0546 Gph, Predicted phosphatases General function prediction only 110642990 Common - hypothetical protein ECP_2835 6 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 110642944 Common - L-fuculokinase ECP_2786 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 110643686 Common - hypothetical protein YrhB ECP_3539 2 None None None 110644715 Pathogen - hypothetical protein ECP_4608 2 None None None 110641593 Common - putative CDP-alcohol phosphatidyltransferase ECP_1413 23 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 110643708 Common - hypothetical protein ECP_3561 15 COG3714 COG3714, Predicted membrane protein Function unknown 110643617 Common - hypothetical protein YhfZ ECP_3468 12 None None None 110640688 Common - protoheme IX farnesyltransferase ECP_0488 172 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 110642227 Common - hypothetical protein ECP_2057 127 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110642377 Common - fructose-specific PTS system IIBC component ECP_2207 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 110641203 Common - hypothetical protein ECP_1019 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 110644369 Pathogen - hypothetical protein ECP_4248 1 None None None 110643727 Pathogen - hypothetical protein ECP_3580 1 None None None 110642222 Common - hypothetical protein YeeA (putative membrane protein) ECP_2052 23 COG1289 COG1289, Predicted membrane protein Function unknown 110642147 Common - probable 3-hydroxybutyryl-CoA dehydrogenase ECP_1977 161 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 110640311 Common secA preprotein translocase subunit SecA ECP_0100 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 110643312 Common - G/U mismatch-specific DNA glycosylase ECP_3158 29 COG3663 Mug, G:T/U mismatch-specific DNA glycosylase DNA replication, recombination, and repair 110642373 Common - DNA-binding transcriptional activator of stationary phase nitrogen survival ECP_2203 17 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 110641683 Common - altronate oxidoreductase ECP_1505 84 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 110642424 Common - thiamine biosynthesis lipoprotein ApbE ECP_2257 139 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 110640342 Common - hypothetical protein ECP_0131 2 None None None 110643884 Common rph ribonuclease PH ECP_3741 185 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 110641972 Common - pyruvate kinase ECP_1798 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 110644274 Common - transcriptional repressor protein MetJ ECP_4147 23 COG3060 MetJ, Transcriptional regulator of met regulon Transcription / Amino acid transport and metabolism 110642112 Common - yersiniabactin transcriptional regulator, YbtA ECP_1941 65 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110641471 Pathogen - hypothetical protein ECP_1289 1 None None None 110640341 Common - multicopper oxidase ECP_0130 123 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 110641521 Common - RNase II stability modulator ECP_1339 181 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 110641333 Pathogen - hypothetical protein ECP_1151 1 None None None 110642935 Common - SecY interacting protein Syd ECP_2775 19 None None None 110641881 Common - glutamate dehydrogenase ECP_1707 174 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 110644736 Common - hypothetical protein ECP_4629 23 None None None 110644119 Common - 4-alpha-L-fucosyltransferase ECP_3984 18 None None None 110643386 Common - galactosamine-6-phosphate isomerase ECP_3233 74 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 110644285 Common - hypothetical protein YijF precursor ECP_4158 17 COG3738 COG3738, Uncharacterized protein conserved in bacteria Function unknown 110640754 Common - hypothetical protein ECP_0554 41 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110643502 Common panF sodium/panthothenate symporter ECP_3351 173 COG4145 PanF, Na+/panthothenate symporter Coenzyme metabolism 110643489 Common - hypothetical protein ECP_3338 1 None None None 110643840 Common - PTS system, mannitol-specific IIABC component ECP_3697 71 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 110642654 Common bcp thioredoxin-dependent thiol peroxidase ECP_2494 216 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 110643473 Common - hypothetical protein YhcN precursor ECP_3322 8 None None None 110641916 Common - hypothetical protein ECP_1742 40 COG2261 COG2261, Predicted membrane protein Function unknown 110643627 Common - hypothetical protein ECP_3480 6 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 110641067 Common - hypothetical protein ECP_0881 97 COG0393 COG0393, Uncharacterized conserved protein Function unknown 110642187 Pathogen - hypothetical protein ECP_2017 1 None None None 110643077 Common frcK putative fructose transport system kinase ECP_2922 61 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 110643733 Common - inner membrane transporter YhiP ECP_3586 81 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 110643452 Common - hypothetical protein YhcC ECP_3299 88 COG1242 COG1242, Predicted Fe-S oxidoreductase General function prediction only 110641769 Common - putative aldo/keto reductase ECP_1593 173 COG4989 COG4989, Predicted oxidoreductase General function prediction only 110643573 Common - putative general secretion pathway protein M ECP_3422 3 COG3149 PulM, Type II secretory pathway, component PulM Intracellular trafficking and secretion 110644765 Common - mannonate dehydratase ECP_4658 58 COG1312 UxuA, D-mannonate dehydratase Carbohydrate transport and metabolism 110640644 Common - bacterial alkaline phosphatase ECP_0442 84 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 110642386 Common - putative lipoprotein, suppresses thermosensitivity of prc mutants at low osmolality ECP_2216 137 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 110643493 Common - hypothetical protein ECP_3342 18 None None None 110641354 Common - major coat protein ECP_1172 10 None None None 110642813 Common - glutamate--cysteine ligase ECP_2653 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 110640844 Common citX 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase ECP_0645 24 COG3697 CitX, Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) Coenzyme metabolism / Lipid metabolism 110641114 Common - hypothetical protein ECP_0928 95 COG2835 COG2835, Uncharacterized conserved protein Function unknown 110644455 Common phnK phosphonates transport ATP-binding protein ECP_4340 249 COG4107 PhnK, ABC-type phosphonate transport system, ATPase component Inorganic ion transport and metabolism 110642636 Common - transaldolase A ECP_2476 188 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 110640237 Common ileS isoleucyl-tRNA synthetase ECP_0024 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110643070 Common pgk phosphoglycerate kinase ECP_2915 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 110641779 Common - hypothetical protein ECP_1603 1 None None None 110643826 Common - hypothetical protein ECP_3681 9 None None None 110640248 Common - carnitine operon protein CaiE ECP_0035 196 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 110644599 Common - anaerobic ribonucleoside triphosphate reductase ECP_4487 97 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 110643563 Common - probable general secretion pathway protein C ECP_3412 11 COG3031 PulC, Type II secretory pathway, component PulC Intracellular trafficking and secretion 110642131 Common - predicted multidrug efflux system ECP_1960 163 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 110640932 Common sdhA succinate dehydrogenase flavoprotein subunit ECP_0735 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 110643423 Common obgE GTPase ObgE ECP_3270 228 COG0536 Obg, Predicted GTPase General function prediction only 110644164 Common - hypothetical protein ECP_4033 46 None None None 110644611 Common - carbamate kinase ECP_4499 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 110644680 Pathogen - hypothetical protein ECP_4573 1 None None None 110642027 Common fliA flagellar biosynthesis sigma factor ECP_1855 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 110643541 Common rpmD 50S ribosomal protein L30 ECP_3390 154 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 110641517 Common - translation initiation factor Sui1 ECP_1335 50 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 110642140 Common - putative non-ribosomal peptide synthase ECP_1970 235 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110641827 Common - hypothetical protein ECP_1653 6 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 110641425 Common - iron(III) ABC transporter, permease protein ECP_1243 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110642664 Common - exopolyphosphatase ECP_2504 180 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 110643658 Common glpD glycerol-3-phosphate dehydrogenase ECP_3511 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 110644539 Common - putative phage shock protein A ECP_4427 19 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 110642892 Common - adenylylsulfate kinase ECP_2732 145 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 110642561 Common - putative transporter YfdV ECP_2397 58 COG0679 COG0679, Predicted permeases General function prediction only 110641671 Common - hypothetical protein YdeM ECP_1493 119 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 110644049 Common trmE tRNA modification GTPase TrmE ECP_3907 230 COG0486 ThdF, Predicted GTPase General function prediction only 110640659 Common - exonuclease subunit SbcD ECP_0457 112 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 110644355 Common - PTS system, sorbose-specific IID component ECP_4234 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 110640715 Common - hypothetical protein ECP_0515 5 None None None 110641548 Common - hypothetical protein YcjR ECP_1366 67 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 110641693 Common - hypothetical protein ECP_1515 5 None None None 110643993 Common - hypothetical protein ECP_3851 8 COG2378 COG2378, Predicted transcriptional regulator Transcription 162138275 Common - propionate/acetate kinase ECP_3208 161 COG0282 ackA, Acetate kinase Energy production and conversion 110641526 Common - putative multidrug-efflux transport protein ECP_1344 160 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110641048 Common - hypothetical transcriptional regulator YbjK ECP_0860 30 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 110640984 Common - hypothetical protein YbhK ECP_0794 94 COG0391 COG0391, Uncharacterized conserved protein Function unknown 110644586 Common - hypothetical protein YtfN ECP_4474 93 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 110640638 Common - transport protein ECP_0436 57 COG1133 SbmA, ABC-type long-chain fatty acid transport system, fused permease and ATPase components Lipid metabolism 110640436 Common - hypothetical protein ECP_0228 11 None None None 110644815 Common - putative deoxyribonuclease YjjV ECP_4762 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 110643043 Common - flavodoxin FldB ECP_2888 67 COG0716 FldA, Flavodoxins Energy production and conversion 110643653 Common - protein RtcB ECP_3506 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 110642219 Common - hypothetical protein YeeW ECP_2049 2 None None None 110641290 Common - transcription-repair coupling factor ECP_1106 234 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 110643206 Common - glycolate transporter ECP_3052 104 COG1620 LldP, L-lactate permease Energy production and conversion 110644413 Common - putative sodium/hydrogen exchanger family protein YjcE ECP_4294 108 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 110640333 Common aceF dihydrolipoamide acetyltransferase ECP_0122 197 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 110643457 Common - N-acetylmannosamine-6-phosphate 2-epimerase ECP_3306 43 COG3010 NanE, Putative N-acetylmannosamine-6-phosphate epimerase Carbohydrate transport and metabolism 110644745 Pathogen - hypothetical protein ECP_4638 1 None None None 110643932 Common - putative transcription regulator protein ECP_3790 73 COG1309 AcrR, Transcriptional regulator Transcription 110641785 Common - riboflavin synthase subunit alpha ECP_1609 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 110644313 Common - biotin--protein ligase ECP_4187 231 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 110644210 Common glnA glutamine synthetase ECP_4081 227 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 110640542 Common - hypothetical protein YeeU ECP_0337 10 None None None 110641124 Common - hypothetical protein YcbL ECP_0938 221 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 110640991 Common - hypothetical protein ECP_0801 25 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 110640309 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase ECP_0098 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 110640548 Common - CP4-like integrase ECP_0343 84 None None None 110641104 Common - phosphoserine aminotransferase ECP_0918 111 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 110644441 Common - hypothetical membrane protein ECP_4324 3 None None None 110640803 Common - periplasmic copper-binding protein ECP_0604 29 COG5569 COG5569, Uncharacterized conserved protein Function unknown 110642241 Common - UDP-glucose 6-dehydrogenase ECP_2071 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 110642586 Common gltX glutamyl-tRNA synthetase ECP_2422 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 110643103 Common - putative deoxyribonucleotide triphosphate pyrophosphatase ECP_2948 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 110643329 Common - hypothetical protein YgjP ECP_3176 40 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 110641215 Common - curli assembly protein CsgE ECP_1031 10 None None None 110643759 Common - multidrug resistance efflux protein MdtE ECP_3612 165 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 110643635 Common - hypothetical protein ECP_3488 16 None None None 110643704 Common - cell division protein FtsY ECP_3557 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 110644687 Common - probable hemagglutinin-related protein ECP_4580 119 None None None 110643715 Common - hypothetical protein ECP_3568 58 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643711 Common - IS putative transposase ECP_3564 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644608 Common - putative arginine repressor ECP_4496 68 COG1438 ArgR, Arginine repressor Transcription 110641788 Common - hypothetical protein ECP_1614 17 None None None 110643381 Common - putative tagatose-6-phosphate ketose/aldose isomerase ECP_3228 35 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 110643243 Common - biopolymer transport protein ExbD ECP_3089 138 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 110644231 Common - hypothetical protein YiiE ECP_4102 4 None None None 110642568 Common - lipid A biosynthesis palmitoleoyl acyltransferase ECP_2404 99 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 110643257 Common - putative C4-dicarboxylate transport system binding protein ECP_3103 100 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 110643362 Common - threonine/serine transporter ECP_3209 33 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110642380 Common - sugar efflux transporter B ECP_2210 42 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642051 Common fliM flagellar motor switch protein FliM ECP_1879 110 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 110641370 Pathogen - hypothetical protein ECP_1188 1 None None None 110642151 Common - putative transcriptional regulator ECP_1981 43 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110640524 Common - transposase/IS protein ECP_0319 101 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110643784 Common - hypothetical membrane protein YhjT ECP_3637 6 None None None 110643774 Common - protein YhjJ precursor ECP_3627 49 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 110640656 Common - fructokinase ECP_0454 161 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110644101 Common - dihydroxy-acid dehydratase ECP_3964 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 110642865 Common - putative transposase ECP_2705 61 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641863 Common - periplasmic protein ECP_1689 19 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 110644696 Common - hypothetical protein ECP_4589 6 None None None 110642067 Common - hypothetical protein ECP_1895 62 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 110642032 Common - flagellar biosynthesis protein FliT ECP_1860 10 None None None 110643094 Common - endonuclease I precursor ECP_2939 33 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 110640614 Common - propionate-CoA ligase ECP_0410 216 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 110640923 Common - hypothetical protein ECP_0726 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 110644347 Common aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein ECP_4226 29 COG4579 COG4579, Isocitrate dehydrogenase kinase/phosphatase Signal transduction mechanisms 110640850 Common - DNA-binding response regulator in two-component regulatory system with citA ECP_0651 163 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 110640404 Common - acetyl-CoA carboxylase carboxyltransferase subunit alpha ECP_0193 191 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 110640893 Common - putative integral membrane transport protein ECP_0694 94 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 110642518 Common - hypothetical protein ECP_2353 19 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 110644023 Common - hypothetical protein ECP_3881 6 None None None 110642761 Common tyrA bifunctional chorismate mutase/prephenate dehydrogenase ECP_2601 87 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 110643377 Common - putative phosphotransferase system enzyme subunit (AgaW) ECP_3224 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 110643302 Common folB bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ECP_3148 55 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 110643863 Common - ADP-heptose:LPS heptosyltransferase II ECP_3720 105 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 110642979 Common - 2-hydroxyacid dehydrogenase ECP_2824 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 110640441 Common - hypothetical protein ECP_0233 14 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 110644626 Common - L-idonate 5-dehydrogenase, NAD-binding ECP_4516 201 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110642343 Common pbpG D-alanyl-D-alanine endopeptidase ECP_2173 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 110641843 Common - hypothetical protein YdiY precursor (putative outer membrane protein) ECP_1669 35 COG3137 COG3137, Putative salt-induced outer membrane protein Cell envelope biogenesis, outer membrane 110643907 Common - putative phage integrase ECP_3765 120 COG0582 XerC, Integrase DNA replication, recombination, and repair 110643330 Common - hypothetical protein YgjQ ECP_3177 46 COG2949 SanA, Uncharacterized membrane protein Function unknown 110644138 Common uvrD DNA-dependent helicase II ECP_4007 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 110641872 Common - hypothetical protein YdjZ (hypothetical transmembrane protein, DedA family) ECP_1698 113 COG0398 COG0398, Uncharacterized conserved protein Function unknown 110641349 Common - terminase large subunit ECP_1167 36 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 110642244 Common - mannose-1-phosphate guanylyltransferase ECP_2074 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 110643537 Common rpsM 30S ribosomal protein S13 ECP_3386 245 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 110641894 Common - hypothetical sugar kinase YdjH ECP_1720 196 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110644658 Common - putative transposase ECP_4551 28 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642450 Common glpC sn-glycerol-3-phosphate dehydrogenase subunit C ECP_2285 181 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 110642230 Common - hypothetical protein ECP_2060 53 COG4115 COG4115, Uncharacterized protein conserved in bacteria Function unknown 110640771 Common - allantoin permease ECP_0571 51 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 110644636 Pathogen - hypothetical protein ECP_4529 2 None None None 110643807 Common glyQ glycyl-tRNA synthetase subunit alpha ECP_3662 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 110644179 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase ECP_4048 222 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110642722 Common - hypothetical protein ECP_2562 12 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 110640759 Common - short chain dehydrogenase ECP_0559 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 110642824 Common - glucitol/sorbitol-specific PTS system component IIA ECP_2664 22 COG3731 SrlB, Phosphotransferase system sorbitol-specific component IIA Carbohydrate transport and metabolism 110642908 Common - hypothetical protein YqcE (putative membrane protein) ECP_2748 23 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 110643196 Common - hypothetical type II secretion protein GspH ECP_3042 14 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110642736 Common - L-aspartate oxidase ECP_2576 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 110640461 Common - putative periplasmic protein ECP_0254 53 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 110640290 Common - acetolactate synthase 3 catalytic subunit ECP_0079 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 110643149 Common - transposase for insertion sequence IS100 ECP_2995 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644729 Common - hypothetical protein ECP_4622 7 None None None 110644720 Pathogen - hypothetical protein ECP_4613 1 None None None 110643422 Common - D-alanyl-D-alanine carboxypeptidase/endopeptidase ECP_3269 109 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 110640355 Common - hypothetical protein ECP_0144 3 None None None 110644525 Common - putative ATPase ECP_4413 208 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 110640760 Common - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 ECP_0560 98 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 110643763 Common - glutamate decarboxylase alpha ECP_3616 67 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 110642799 Common nrdI ribonucleotide reductase stimulatory protein ECP_2639 39 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 110641276 Common - predicted metallodependent hydrolase ECP_1092 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 110642003 Common - purine-binding chemotaxis protein ECP_1831 121 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 110641535 Common - hypothetical protein YmjA ECP_1353 5 None None None 110642776 Common - recombination and repair protein ECP_2616 200 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 110644131 Common cyaY frataxin-like protein ECP_4000 44 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 110642049 Common - flagellar hook-length control protein ECP_1877 45 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 110643280 Common nudF ADP-ribose pyrophosphatase NudF ECP_3126 105 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 110642914 Common - sucrose operon repressor ECP_2754 125 COG1609 PurR, Transcriptional regulators Transcription 110643022 Common - dihydropyrimidinase ECP_2867 206 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 110641316 Common - transposase for insertion sequence IS100 ECP_1134 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641505 Common - hypothetical protein ECP_1323 13 None None None 110642982 Common - PTS system, maltose and glucose-specific IIABC component ECP_2827 54 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110640998 Common - hypothetical ABC transporter ATP-binding protein YbhF ECP_0808 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 110641831 Common - vitamin B12-transporter ATPase ECP_1657 249 COG4138 BtuD, ABC-type cobalamin transport system, ATPase component Coenzyme metabolism 110642237 Common - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase ECP_2067 213 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 110643511 Common - acriflavine resistance protein F ECP_3360 178 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110641623 Common - hypothetical binding-protein-dependent transport system inner membrane component ECP_1445 120 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 110644136 Common xerC site-specific tyrosine recombinase XerC ECP_4005 228 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 110643953 Common - putative CS12 fimbria-like major fimbrial protein subunit ECP_3811 12 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640601 Common - hypothetical protein YahE ECP_0396 6 None None None 110640270 Common - 23S rRNA/tRNA pseudouridine synthase A ECP_0059 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 110641757 Common tppB putative tripeptide transporter permease ECP_1579 86 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 110640780 Common - hypothetical protein YlbF ECP_0580 5 None None None 110641583 Common - probable pyruvate-flavodoxin oxidoreductase ECP_1403 117 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 110642818 Common recX recombination regulator RecX ECP_2658 67 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 110643262 Common - DNA topoisomerase IV subunit A ECP_3108 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 110640586 Common - hypothetical protein ECP_0381 1 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110644791 Common - C4-dicarboxylate transporter large subunit ECP_4684 135 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 110643973 Common - putative phosphoadenosine phosphosulfate reductase family ECP_3831 20 COG3969 COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase General function prediction only 110641650 Common - hypothetical protein ECP_1472 42 None None None 110644651 Pathogen - hypothetical protein ECP_4544 1 None None None 110643311 Common - RNA polymerase sigma factor RpoD ECP_3157 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 110641050 Common - putative inner membrane protein YbjM ECP_0862 8 None None None 110642691 Common hscA chaperone protein HscA ECP_2531 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 110642541 Common - hypothetical outer membrane usher protein YfcU precursor ECP_2376 31 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110642656 Common - hypothetical protein YfgC precursor ECP_2496 126 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 110641409 Common umuC DNA polymerase V subunit UmuC ECP_1227 182 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 110642119 Common - hypothetical protein ECP_1948 5 None None None 110643808 Common - putative lipoprotein ECP_3663 6 None None None 110642419 Common - malate:quinone oxidoreductase ECP_2252 57 COG0579 COG0579, Predicted dehydrogenase General function prediction only 110644012 Common - putative xanthine/uracil permeases family ECP_3870 139 COG2252 COG2252, Permeases General function prediction only 110644601 Common - trehalose(maltose)-specific PTS system components IIBC ECP_4489 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110641611 Common - potassium-tellurite ethidium and proflavin transporter ECP_1433 49 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 110644386 Common - quinone oxidoreductase, NADPH-dependent ECP_4267 176 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 110643435 Common - putative ABC transporter ATP-binding protein YrbF ECP_3282 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 110640566 Common - probable NADH-dependent flavin oxidoreductase YqiG ECP_0361 176 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 110643482 Common - Maf-like protein ECP_3331 198 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 110641243 Common - hypothetical protein ECP_1059 41 COG3132 COG3132, Uncharacterized protein conserved in bacteria Function unknown 110644301 Common - starvation sensing protein RspA ECP_4174 107 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110642126 Common - AMP nucleosidase ECP_1955 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 110642554 Common - truncated DsdX permease ECP_2390 13 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110641438 Common - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ECP_1256 193 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 110642348 Pathogen - hypothetical protein ECP_2178 1 None None None 110642814 Common - hypothetical protein YqaA ECP_2654 73 COG1238 COG1238, Predicted membrane protein Function unknown 110641198 Pathogen - hypothetical protein ECP_1014 2 None None None 110641326 Common - hypothetical phage associated protein ECP_1144 26 COG4933 COG4933, Uncharacterized conserved protein Function unknown 110642353 Common - hypothetical protein ECP_2183 41 COG2949 SanA, Uncharacterized membrane protein Function unknown 110642878 Common - hypothetical protein ECP_2718 77 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110641035 Common - hypothetical protein YliE ECP_0847 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110642015 Pathogen - hypothetical protein ECP_1843 1 None None None 110644304 Common - soluble pyridine nucleotide transhydrogenase ECP_4177 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 110644172 Common - integral membrane protein ECP_4041 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 110644421 Pathogen - hypothetical protein ECP_4302 1 None None None 110641814 Common aroD 3-dehydroquinate dehydratase ECP_1640 55 COG0710 AroD, 3-dehydroquinate dehydratase Amino acid transport and metabolism 110644471 Common - DNA-binding response regulator in two-component regulatory system with BasS ECP_4356 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110643239 Common - predicted hydrolase ECP_3085 121 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 110642302 Common - galactitol-specific PTS system component IIA ECP_2132 16 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 110641853 Common - hypothetical protein ECP_1679 58 COG3394 COG3394, Uncharacterized protein conserved in bacteria Function unknown 110643218 Common - putative permease ECP_3064 122 COG0795 COG0795, Predicted permeases General function prediction only 110643333 Common - hypothetical symporter YgjU (hypothetical sodium:dicarboxylate symporter family) ECP_3180 106 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 110642444 Common - 2Fe-2S ferredoxin YfaE ECP_2279 50 COG0633 Fdx, Ferredoxin Energy production and conversion 110640273 Common araD L-ribulose-5-phosphate 4-epimerase ECP_0062 107 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 110641848 Common - predicted hydrolase ECP_1674 170 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 110642393 Common - bicyclomycin/multidrug efflux system ECP_2223 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642439 Common - DNA gyrase subunit A ECP_2274 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 110640695 Common - transcriptional regulator BolA ECP_0495 105 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 110642488 Common - NADH dehydrogenase I subunit F ECP_2323 167 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 110644507 Common - entericidin A ECP_4392 3 COG5510 COG5510, Predicted small secreted protein Function unknown 110640452 Common - H repeat-associated protein of Rhs element ECP_0244 3 COG5433 COG5433, Transposase DNA replication, recombination, and repair 110641084 Common infA translation initiation factor IF-1 ECP_0898 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 110642546 Common - hypothetical protein YfcZ ECP_2381 15 COG3691 COG3691, Uncharacterized protein conserved in bacteria Function unknown 110643084 Common - transketolase ECP_2929 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 110642967 Pathogen - hypothetical protein ECP_2812 2 None None None 110641966 Common - DNA damage-inducible protein YebG ECP_1792 17 COG3141 COG3141, Uncharacterized protein conserved in bacteria Function unknown 110640910 Common - ornithine decarboxylase, inducible ECP_0711 82 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 110642208 Common - hypothetical protein ECP_2038 11 COG1161 COG1161, Predicted GTPases General function prediction only 110640592 Common - betaine aldehyde dehydrogenase ECP_0387 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110643697 Common - branched-chain amino acid transporter permease subunit LivH ECP_3550 151 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 110642539 Common - hypothetical protein YfcR precursor ECP_2374 7 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641078 Common - hypothetical protein YbjX ECP_0892 21 COG2990 VirK, Uncharacterized protein conserved in bacteria Function unknown 110644494 Common - putative transcriptional regulator ECP_4379 33 COG1309 AcrR, Transcriptional regulator Transcription 110641629 Common - hypothetical protein ECP_1451 4 None None None 110640448 Common - Vgr-like protein ECP_0240 59 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 110643269 Common - putative cytoplasmic protein ECP_3115 16 COG1359 COG1359, Uncharacterized conserved protein Function unknown 110642973 Common - hypothetical protein ECP_2818 45 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 110642262 Common - GDP-fucose synthetase ECP_2092 223 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110642515 Common - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ECP_2350 151 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 110641307 Common - DNA-binding response regulator in two-component regulatory system with PhoQ ECP_1125 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110643605 Common - nitrite reductase [NAD(P)H] large subunit ECP_3456 195 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 110642704 Common - IS putative transposase ECP_2544 137 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643399 Common - putative protease YhbU precursor ECP_3246 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 110643045 Common - hypothetical protein ECP_2890 50 COG2938 COG2938, Uncharacterized conserved protein Function unknown 110644189 Common fadA 3-ketoacyl-CoA thiolase ECP_4058 179 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 110640945 Common - colicin uptake protein TolQ ECP_0748 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 110641461 Common purU formyltetrahydrofolate deformylase ECP_1279 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 110642270 Common - tyrosine kinase ECP_2100 148 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 110644284 Common - hypothetical transport protein YijE ECP_4157 141 COG2962 RarD, Predicted permeases General function prediction only 110644324 Common thiH thiamine biosynthesis protein ThiH ECP_4202 56 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 110640573 Common - putative bacterial regulatory helix-turn-helix proteins, AraC family ECP_0368 112 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 110643911 Pathogen - hypothetical protein ECP_3769 1 None None None 110641190 Common - putative flavin:NADH reductase YcdH ECP_1006 102 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 110641400 Common minC septum formation inhibitor ECP_1218 81 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 110644567 Common - putative acetyl-CoA:acetoacetyl-CoA transferase beta subunit ECP_4455 101 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 110644170 Common - putative carboxymethylenebutenolidase ECP_4039 115 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 110644094 Common - hypothetical transport protein YieO ECP_3954 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644707 Common - hypothetical protein ECP_4600 58 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 110643212 Common - DNA-binding transcriptional dual regulator, glycolate-binding ECP_3058 129 COG2186 FadR, Transcriptional regulators Transcription 110644673 Pathogen - hypothetical protein ECP_4566 1 None None None 110642505 Common - hypothetical GST-like protein YfcF ECP_2340 61 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110643879 Common radC DNA repair protein RadC ECP_3736 179 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 110640879 Common lnt apolipoprotein N-acyltransferase ECP_0680 165 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 110641368 Common - putative tail fiber protein ECP_1186 4 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 110641281 Common - hypothetical protein YcfM ECP_1097 21 COG3417 FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) General function prediction only 110641142 Common - ribosome modulation factor ECP_0958 21 COG3130 Rmf, Ribosome modulation factor Translation, ribosomal structure and biogenesis 110641468 Common - truncated transposase InsG ECP_1286 20 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 110641688 Common - hypothetical transcriptional regulator YneJ ECP_1510 172 COG0583 LysR, Transcriptional regulator Transcription 110643959 Pathogen - FasG-like protein ECP_3817 1 None None None 110640414 Common - hypothetical protein ECP_0203 4 None None None 110640465 Common - flagellar biosynthetic protein FlhA ECP_0258 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 110643136 Common - putative L-fucose permease ECP_2982 45 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 110640473 Common - aminoacyl-histidine dipeptidase ECP_0266 60 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 110641025 Common - putative hydrolase of the HAD superfamily ECP_0835 114 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 110641164 Common - hydrogenase 1 maturation protease ECP_0980 77 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 110641676 Common - putative fimbrial-like protein ECP_1498 11 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110642085 Pathogen - hypothetical protein ECP_1913 3 None None None 110640420 Common metN DL-methionine transporter ATP-binding subunit ECP_0209 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 110643082 Common - predicted mannitol-specific enzyme IIA component of PTS ECP_2927 39 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 110644822 Pathogen - hypothetical protein ECP_4769 2 None None None 110641189 Common - probable transport protein YcdG ECP_1005 129 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 110642712 Common glyA serine hydroxymethyltransferase ECP_2552 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 110640950 Common - hypothetical protein ECP_0753 103 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 110643672 Common - glycogen debranching enzyme ECP_3525 155 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 110642362 Common - hypothetical protein ECP_2192 48 COG2311 COG2311, Predicted membrane protein Function unknown 110640982 Common bioD dithiobiotin synthetase ECP_0792 157 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 110641046 Common - putative hydrolase YbjI of the HAD superfamily ECP_0858 125 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 110642960 Common - hypothetical secreted hemolysin-coregulated protein Hcp ECP_2805 33 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 110644318 Common rplK 50S ribosomal protein L11 ECP_4196 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 110643142 Common - hypothetical protein ECP_2988 2 None None None 110640370 Common mrcB penicillin-binding protein 1b ECP_0159 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 110641077 Common - hypothetical protein YbjD ECP_0891 32 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 110644700 Common - putative IS orf ECP_4593 31 None None None 110642740 Common - neutral amino-acid efflux protein ECP_2580 93 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 110643053 Common gcvT glycine cleavage system aminomethyltransferase T ECP_2898 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 110641186 Common - hypothetical protein ECP_1002 7 None None None 110642405 Common - cytochrome c-type biogenesis protein CcmF ECP_2236 160 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 110642975 Common - hypothetical protein ECP_2820 36 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 110644087 Common - hypothetical protein YieN ECP_3945 90 COG0714 COG0714, MoxR-like ATPases General function prediction only 110641745 Common - adenosine deaminase ECP_1567 110 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 110641963 Common - protease 2 ECP_1789 100 COG1770 PtrB, Protease II Amino acid transport and metabolism 110641892 Common - hypothetical transcriptional regulator YdjF ECP_1718 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110640727 Common - hypothetical protein ECP_0527 14 None None None 110640703 Common - hypothetical protein YbaV (helix-hairpin-helix DNA-binding motif) ECP_0503 79 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 110640616 Common - cytosine deaminase ECP_0412 71 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 110643241 Common - hypothetical protein ECP_3087 55 COG2862 COG2862, Predicted membrane protein Function unknown 110644468 Common - hypothetical protein YjcZ ECP_4353 5 None None None 110642750 Common - putative transposase ECP_2590 10 None None None 110641086 Common - cysteine/glutathione ABC transporter membrane/ATP-binding component ECP_0900 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 110643171 Common - hypothetical protein ECP_3017 6 None None None 110644294 Common - hypothetical transcriptional regulator YijO ECP_4167 117 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 110642121 Common - hypothetical protein ECP_1950 26 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 110643191 Common - putative general secretion pathway protein YghD ECP_3037 18 COG3149 PulM, Type II secretory pathway, component PulM Intracellular trafficking and secretion 110643929 Common - hypothetical protein ECP_3787 55 COG2259 COG2259, Predicted membrane protein Function unknown 110643914 Common - putative transposase ECP_3772 68 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644142 Pathogen - hypothetical protein ECP_4011 5 None None None 110640546 Common - hypothetical protein ECP_0341 12 None None None 110640215 Common thrA bifunctional aspartokinase I/homeserine dehydrogenase I ECP_0002 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 110641639 Pathogen - hypothetical protein ECP_1461 1 None None None 110644193 Common - potassium transporter ECP_4062 149 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 110642833 Common - electron transport protein HydN ECP_2673 149 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 110642466 Common - hypothetical protein YfbW ECP_2301 12 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110640497 Pathogen - fimbrial transcription regulator protein FaeA ECP_0291 1 COG2345 COG2345, Predicted transcriptional regulator Transcription 110643771 Common - AsmA family protein ECP_3624 34 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 110641807 Common - hypothetical protein ECP_1633 84 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 110644265 Common - ribonuclease activity regulator protein RraA ECP_4138 67 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 110640834 Common - hypothetical protein YbdN ECP_0635 18 COG3969 COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase General function prediction only 110643118 Common - transposase-like protein ECP_2964 4 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642133 Common - hypothetical protein ECP_1963 30 COG4283 COG4283, Uncharacterized conserved protein Function unknown 110640534 Common - putative IS orf ECP_0329 4 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642681 Common - hypothetical protein ECP_2521 44 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 110640789 Common - hypothetical protein ECP_0589 32 COG2501 COG2501, Uncharacterized conserved protein Function unknown 110641359 Common - major tail protein V ECP_1177 8 COG5492 COG5492, Bacterial surface proteins containing Ig-like domains Cell motility and secretion 110642214 Common - hypothetical antirestriction protein ECP_2044 16 None None None 110642476 Common - hypothetical protein ECP_2311 89 COG2153 ElaA, Predicted acyltransferase General function prediction only 110643584 Common - hypothetical protein YheL ECP_3433 20 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 110641731 Common - sensor protein RstB ECP_1553 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110643189 Common - polysialic acid transport ATP-binding protein KpsT ECP_3035 248 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 110643089 Common - hypothetical protein YqgD ECP_2934 3 None None None 110643185 Common - hypothetical protein ECP_3031 6 None None None 110643789 Common dppD dipeptide transporter ATP-binding subunit ECP_3642 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 110641496 Common - hypothetical protein ECP_1314 222 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 110644390 Common - hypothetical protein ECP_4271 59 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 110644275 Common - cystathionine gamma-synthase ECP_4148 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 110641727 Common - putative arginine/ornithine antiporter ECP_1549 136 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110643690 Common ugpC glycerol-3-phosphate transporter ATP-binding subunit ECP_3543 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 110642618 Common - transcriptional regulator EutR ECP_2458 57 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110641234 Common - cytochrome b561-like protein 2 ECP_1050 91 COG3038 CybB, Cytochrome B561 Energy production and conversion 110641994 Common argS arginyl-tRNA synthetase ECP_1822 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110641499 Pathogen - hypothetical membrane protein ECP_1317 1 None None None 110642090 Pathogen - hypothetical protein ECP_1918 3 None None None 110643547 Common rplE 50S ribosomal protein L5 ECP_3396 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 110642792 Common - DNA binding protein, nucleoid-associated ECP_2632 29 COG2916 Hns, DNA-binding protein H-NS General function prediction only 110640881 Common - hypothetical protein ECP_0682 202 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 110643444 Common - putative sigma(54) modulation protein ECP_3291 138 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 110642077 Common - putative sulfite oxidase subunit YedY ECP_1905 107 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 110644839 Common - hypothetical protein ECP_4786 29 COG4452 CreD, Inner membrane protein involved in colicin E2 resistance Defense mechanisms 110640904 Common - flavodoxin FldA ECP_0705 74 COG0716 FldA, Flavodoxins Energy production and conversion 110641553 Common - hypothetical ABC transporter ECP_1371 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 110641733 Common fumC fumarate hydratase ECP_1555 215 COG0114 FumC, Fumarase Energy production and conversion 110642458 Common - hypothetical protein YfaZ precursor ECP_2293 12 None None None 110640363 Common - 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase ECP_0152 196 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 110644768 Common - hypothetical protein YjiD ECP_4661 3 None None None 110643356 Common - hypothetical protein YhaM ECP_3203 35 COG3681 COG3681, Uncharacterized conserved protein Function unknown 110641519 Common - putative regulatory protein YciT, DeoR family ECP_1337 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110641158 Common - putative acylphosphatase ECP_0974 138 COG1254 AcyP, Acylphosphatases Energy production and conversion 110643985 Common - hypothetical transposase ECP_3843 56 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642174 Common - putative carbohydrate kinase ECP_2004 190 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110643198 Common - hypothetical type II secretion protein GspF ECP_3044 141 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 110641510 Common - hypothetical protein ECP_1328 3 None None None 110643161 Common - hypothetical protein ECP_3007 4 None None None 110643128 Common - hypothetical protein ECP_2974 20 None None None 110641991 Common - copper homeostasis protein CutC ECP_1819 58 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 110644257 Common - hypothetical protein YiiR ECP_4130 22 COG3152 COG3152, Predicted membrane protein Function unknown 110640819 Common - iron-enterobactin transporter ATP-binding protein ECP_0620 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 110640965 Common modA molybdate transporter periplasmic protein ECP_0775 161 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 110643747 Common - putative periplasmic binding protein (putative hemin binding protein) ECP_3600 154 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 110640662 Common - branched-chain amino acid permease ECP_0460 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 110641800 Common - cysteine desufuration protein SufE ECP_1626 93 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 110640741 Common ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor ECP_0541 139 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 110643425 Common rpmA 50S ribosomal protein L27 ECP_3272 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 110644800 Common - primosomal protein I ECP_4693 8 COG5529 COG5529, Pyocin large subunit General function prediction only 110640631 Common tauB taurine transporter ATP-binding subunit ECP_0429 249 COG4525 TauB, ABC-type taurine transport system, ATPase component Inorganic ion transport and metabolism 110644004 Common - hypothetical protein ECP_3862 13 None None None 110644243 Common - L-rhamnose operon transcriptional activator RhaR ECP_4116 116 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110641614 Common - putative benzoate membrane transport protein ECP_1436 59 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 110641809 Common - predicted inner membrane protein ECP_1635 88 COG0628 PerM, Predicted permease General function prediction only 110644068 Common pstC phosphate transporter permease subunit ECP_3926 225 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 110640406 Common - hypothetical protein ECP_0195 42 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 110642279 Common - putative chaperone ECP_2109 232 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 110640971 Common - hypothetical transcriptional regulator ECP_0781 3 COG0583 LysR, Transcriptional regulator Transcription 110641321 Common - hypothetical protein ECP_1139 2 None None None 110644588 Common - inorganic pyrophosphatase ECP_4476 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 110642487 Common - NADH dehydrogenase subunit G ECP_2322 188 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 110640298 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase ECP_0087 207 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 110640451 Pathogen - hypothetical protein ECP_0243 1 None None None 110643529 Common mscL large-conductance mechanosensitive channel ECP_3378 142 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110643894 Common - sodium/glutamate symport carrier protein ECP_3751 53 COG0786 GltS, Na+/glutamate symporter Amino acid transport and metabolism 110640747 Common - putative HTH-type transcriptional regulator YbaQ ECP_0547 72 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 110641932 Common - hypothetical protein YoaD ECP_1758 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110643039 Common - peptide chain release factor 2 ECP_2884 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 110642942 Common - L-fucose transporter ECP_2784 50 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 110642328 Common - hypothetical protein YehP ECP_2158 26 COG3552 CoxE, Protein containing von Willebrand factor type A (vWA) domain General function prediction only 110643846 Common - putative haemagglutinin/invasin ECP_3703 116 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 110641391 Common - part of hypothetical protein b1170 (putative autotransporter) ECP_1209 8 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110640224 Common - hypothetical protein ECP_0011 50 COG1584 COG1584, Predicted membrane protein Function unknown 110642431 Common - acetate CoA-transferase beta subunit ECP_2266 98 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 110641659 Common - NAD-dependent malic enzyme ECP_1481 200 COG0281 SfcA, Malic enzyme Energy production and conversion 110640912 Common - potassium-transporting ATPase subunit C ECP_0715 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 110643960 Common - putative transposase ECP_3818 22 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641821 Common - ferredoxin-like protein YdiT ECP_1647 33 COG2440 FixX, Ferredoxin-like protein Energy production and conversion 110641866 Common astD succinylglutamic semialdehyde dehydrogenase ECP_1692 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 110640824 Common - Isochorismate synthase EntC ECP_0625 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110644733 Common - hypothetical protein ECP_4626 17 COG3596 COG3596, Predicted GTPase General function prediction only 110642175 Common - hypothetical protein ECP_2005 11 COG5426 COG5426, Uncharacterized membrane protein Function unknown 110644782 Common - hypothetical protein YjiW ECP_4675 5 None None None 110641899 Common - putative cytoplasmic protein ECP_1725 28 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 110643404 Common - lipoprotein NlpI ECP_3251 66 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 110642626 Common - ethanolamine utilization protein EutJ ECP_2466 22 COG4820 EutJ, Ethanolamine utilization protein, possible chaperonin Amino acid transport and metabolism 110644662 Common - hemolysin A ECP_4555 77 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 110644501 Common groES co-chaperonin GroES ECP_4386 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 110640484 Common - truncated phage T7 exclusion protein ECP_0278 30 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 110642854 Common - formate hydrogenlyase transcriptional activator ECP_2694 171 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 110642643 Pathogen - hypothetical protein ECP_2483 1 None None None 110642576 Common - putative PTS system IIC component YpdG ECP_2412 67 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 110643939 Pathogen - hypothetical protein ECP_3797 1 None None None 110644640 Pathogen - PapG ECP_4533 1 None None None 110643412 Common - argininosuccinate synthase ECP_3259 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 110640681 Common - 1-deoxy-D-xylulose-5-phosphate synthase ECP_0479 223 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 110642782 Common - hypothetical protein ECP_2622 12 None None None 110643897 Common - hypothetical protein ECP_3754 18 COG3822 COG3822, ABC-type sugar transport system, auxiliary component General function prediction only 110643030 Common - possible hypoxanthine oxidase XdhD ECP_2875 111 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 110642283 Common - hypothetical protein ECP_2113 23 COG4245 TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain General function prediction only 110641065 Common artP arginine transporter ATP-binding subunit ECP_0879 249 COG4161 ArtP, ABC-type arginine transport system, ATPase component Amino acid transport and metabolism 110643668 Common - putative major fimbrial subunit precursor ECP_3521 10 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640776 Common - allantoate amidohydrolase ECP_0576 86 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 110644112 Common - UDP-N-acetylglucosamine 2-epimerase ECP_3977 156 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 110644144 Common - hypothetical protein RarD ECP_4013 119 COG2962 RarD, Predicted permeases General function prediction only 110641874 Common - hypothetical protein ECP_1700 28 COG4134 COG4134, ABC-type uncharacterized transport system, periplasmic component General function prediction only 110641418 Common - membrane-bound lytic murein transglycosylase E ECP_1236 67 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 110640856 Common tatE twin arginine translocase protein E ECP_0657 6 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 110644372 Common malF maltose transporter membrane protein ECP_4251 143 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 110641112 Common lpxK tetraacyldisaccharide 4'-kinase ECP_0926 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 110644555 Common sgaE L-ribulose-5-phosphate 4-epimerase ECP_4443 134 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 110644062 Common - 6-phospho-beta-glucosidase BglB ECP_3920 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 110641250 Common flgC flagellar basal body rod protein FlgC ECP_1066 126 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 110640722 Common - hypothetical protein ECP_0522 10 None None None 110642494 Common - aminotransferase AlaT ECP_2329 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 110643982 Common - putative transposase ECP_3840 55 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641338 Common - antitermination protein Q ECP_1156 6 None None None 110640812 Common - hypothetical protein (Hok/Gef family domain) ECP_0613 4 None None None 110643393 Common - hypothetical protein YraR ECP_3240 57 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110641606 Common - putative cytoplasmic protein ECP_1428 23 COG5383 COG5383, Uncharacterized protein conserved in bacteria Function unknown 110640287 Common - 2-isopropylmalate synthase ECP_0076 216 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 110643290 Common ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase ECP_3136 228 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 110644531 Common - FtsH protease regulator HflK ECP_4419 212 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 110640230 Common - hypothetical protein ECP_0017 8 None None None 110641443 Common - putative transcriptional regulator ECP_1261 33 COG3094 COG3094, Uncharacterized protein conserved in bacteria Function unknown 110642426 Common - phosphotransfer intermediate protein in two-component regulatory system with RcsBC ECP_2259 64 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110640895 Common - putative iron-containing alcohol dehydrogenase ECP_0696 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 110643101 Common - putative membran protein YggT ECP_2946 74 COG0762 COG0762, Predicted integral membrane protein Function unknown 110644014 Common uhpT sugar phosphate antiporter ECP_3872 47 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643278 Common - cyclic 3',5'-adenosine monophosphate phosphodiesterase ECP_3124 83 COG1409 Icc, Predicted phosphohydrolases General function prediction only 110640353 Common panC pantoate--beta-alanine ligase ECP_0142 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 110644778 Common - hypothetical protein YjiM ECP_4671 34 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 110640255 Common fixB putative electron transfer flavoprotein FixB ECP_0042 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 110641177 Common - DNA-binding response regulator in two-component regulatory system with TorS ECP_0993 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110644453 Common - HisM-like integral membrane protein PhnM ECP_4338 52 COG3454 COG3454, Metal-dependent hydrolase involved in phosphonate metabolism Inorganic ion transport and metabolism 110643075 Common - possible ABC-transport protein, ATP-binding component ECP_2920 242 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 110640866 Common - hypothetical protein ECP_0667 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 110644250 Common cpxP periplasmic repressor CpxP ECP_4123 17 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 110643930 Common - putative FMN-dependent dehydrogenase ECP_3788 114 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 110644647 Common - PapH ECP_4540 8 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640389 Common tsf elongation factor Ts ECP_0178 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 110641265 Common rpmF 50S ribosomal protein L32 ECP_1081 88 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 110643566 Common - putative general secretion pathway protein F ECP_3415 142 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 110642592 Common - putative transcriptional regulator, LysR family ECP_2432 192 COG0583 LysR, Transcriptional regulator Transcription 110642747 Common pssA phosphatidylserine synthase ECP_2587 30 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 110643830 Common - cryptic L-xylulose kinase ECP_3685 179 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 110641014 Common glnP glutamine ABC transporter permease protein ECP_0824 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 110640398 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase ECP_0187 177 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 110640395 Common - zinc metallopeptidase ECP_0184 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 110643492 Common - acetyl-CoA carboxylase biotin carboxylase subunit ECP_3341 233 COG0439 AccC, Biotin carboxylase Lipid metabolism 110644522 Pathogen - hypothetical protein ECP_4407 1 None None None 110642313 Common - hypothetical protein YohL ECP_2143 75 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 110642802 Pathogen - hypothetical protein ECP_2642 2 None None None 110641920 Common - hypothetical protein ECP_1746 13 None None None 110643587 Common - hypothetical protein YheO ECP_3436 48 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 110641660 Common rpsV 30S ribosomal subunit S22 ECP_1482 5 None None None 110642789 Common - hypothetical protein YqaE ECP_2629 36 COG0401 COG0401, Uncharacterized homolog of Blt101 Function unknown 110643521 Common - putative ribosome maturation factor ECP_3370 239 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 110643921 Pathogen - hypothetical protein ECP_3779 1 None None None 110641137 Common - hypothetical protein YcbY ECP_0953 162 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 110642109 Common - putative cytoplasmic transmembrane protein ECP_1938 19 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643969 Common - hemolysin A ECP_3827 77 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 110644401 Common - putative transport sensor protein ECP_4282 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 110643419 Common rrmJ 23S rRNA methyltransferase J ECP_3266 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 110640470 Common - hypothetical protein ECP_0263 45 COG3153 COG3153, Predicted acetyltransferase General function prediction only 110641010 Common - hypothetical protein ECP_0820 10 None None None 110640554 Pathogen - hypothetical protein ECP_0349 1 None None None 110642411 Common napB diheme cytochrome c550 ECP_2244 40 COG3043 NapB, Nitrate reductase cytochrome c-type subunit Energy production and conversion 110642138 Common - hypothetical drug/sodium antiporter ECP_1968 169 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 110644196 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A ECP_4067 137 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 110642698 Common - inositol monophosphatase ECP_2538 217 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 110641423 Common - hypothetical protein ECP_1241 29 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 110642366 Common - lysine transporter ECP_2196 169 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 110643740 Common - hypothetical protein ECP_3593 2 None None None 110642040 Common - hypothetical transcriptional regulator YbcM ECP_1868 49 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 162138282 Common - glutamyl-Q tRNA(Asp) synthetase ECP_0154 248 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 110642160 Common cobS cobalamin synthase ECP_1990 144 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 110644249 Common - DNA-binding response regulator in two-component regulatory system with CpxA ECP_4122 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110640526 Common - transposase ECP_0321 52 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641558 Common - DNA-binding transcriptional dual regulator, tyrosine-binding ECP_1376 173 COG3283 TyrR, Transcriptional regulator of aromatic amino acids metabolism Transcription / Amino acid transport and metabolism 110641008 Common - putative hydroxylase ECP_0818 44 COG3128 PiuC, Uncharacterized iron-regulated protein Function unknown 110644209 Common glnL nitrogen regulation protein NR(II) ECP_4080 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 110643441 Common - hypothetical protein ECP_3288 69 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 110642869 Common - hypothetical protein ECP_2709 5 None None None 110644357 Common - PTS system, sorbose-specific IIB component ECP_4236 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 110643995 Common - putative cytoplasmic protein ECP_3853 4 None None None 110641090 Common - DNA translocase FtsK ECP_0904 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 110641904 Common - MltA-interacting protein precursor ECP_1730 35 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 110643842 Common mtlR mannitol repressor protein ECP_3699 18 COG3722 MtlR, Transcriptional regulator Transcription 110643872 Common - UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG ECP_3729 159 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110642675 Common - putative cytoplasmic protein ECP_2515 10 None None None 110641292 Common - hypothetical protein ECP_1108 19 COG4763 COG4763, Predicted membrane protein Function unknown 110644685 Common - hypothetical protein ECP_4578 57 None None None 110641929 Common - para-aminobenzoate synthase component I ECP_1755 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 110642381 Common - hypothetical protein ECP_2211 34 None None None 110644042 Common gyrB DNA gyrase subunit B ECP_3900 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 110641299 Common potD spermidine/putrescine ABC transporter periplasmic substrate-binding protein ECP_1117 140 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 110644093 Common - transcriptional repressor RbsR ECP_3953 129 COG1609 PurR, Transcriptional regulators Transcription 110642177 Common - putative phosphotriesterase ECP_2007 32 COG1735 Php, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 110640730 Common - adenine phosphoribosyltransferase ECP_0530 190 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 110640438 Common - hypothetical protein ECP_0230 44 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 110640331 Pathogen - hypothetical protein ECP_0120 1 None None None 110640489 Common - transposase ECP_0283 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643772 Common - EAL domain containing protein involved in flagellar function ECP_3625 126 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110641825 Common - hypothetical protein ECP_1651 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 110644406 Common - single-strand DNA-binding protein ECP_4287 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 110641528 Common - probable outer membrane efflux lipoprotein ECP_1346 132 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110643984 Common - transposase/IS protein ECP_3842 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110643211 Common - glycolate oxidase subunit GlcD ECP_3057 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 110644103 Common - DNA-binding transcriptional regulator IlvY ECP_3966 189 COG0583 LysR, Transcriptional regulator Transcription 110642997 Common - fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain ECP_2842 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 110641388 Common - hypothetical protein YmgF ECP_1206 1 None None None 110643259 Common - putative C4-dicarboxylate transport system ECP_3105 122 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 110642323 Common - molybdate metabolism regulator ECP_2153 12 COG3831 COG3831, Uncharacterized conserved protein Function unknown 110643327 Common - hypothetical protein ECP_3174 2 COG4680 COG4680, Uncharacterized protein conserved in bacteria Function unknown 110641385 Common - hypothetical protein YmgB ECP_1203 2 None None None 110642867 Common - putative transposase ECP_2707 77 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644392 Common - aromatic amino acid aminotransferase ECP_4273 85 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 110643480 Common - hypothetical protein ECP_3329 56 COG3164 COG3164, Predicted membrane protein Function unknown 110643644 Common - hypothetical protein ECP_3497 27 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110643364 Common - DNA-binding transcriptional activator ECP_3211 187 COG0583 LysR, Transcriptional regulator Transcription 110643757 Common - hypothetical protein YhiE ECP_3610 2 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110641743 Common - bifunctional maltose and glucose-specific PTS system components IICB ECP_1565 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110642844 Common - formate hydrogenase-3 component E ECP_2684 196 COG3261 HycE, Ni,Fe-hydrogenase III large subunit Energy production and conversion 110642069 Pathogen - hypothetical protein ECP_1897 1 None None None 110640921 Common - hypothetical protein ECP_0724 77 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 110642566 Common - hypothetical lipoprotein YpdI precursor ECP_2402 2 None None None 110644295 Common - hypothetical protein ECP_4168 54 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110641886 Common - selenophosphate synthetase ECP_1712 148 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 110643153 Common - hypothetical protein ECP_2999 2 None None None 110644387 Common - replicative DNA helicase ECP_4268 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 110644123 Common - putative arylsulfatase regulatory protein ECP_3992 94 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 110642251 Common - putative O antigen flippase ECP_2081 41 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 110642659 Common - uracil transporter ECP_2499 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 110640654 Common - hypothetical protein YkiA ECP_0452 2 None None None 110643096 Common - glutathione synthetase ECP_2941 125 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 110640556 Common - putative ferredoxin ECP_0351 21 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 110640805 Common - putative cation efflux system protein CusA ECP_0606 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 110640820 Common - iron-enterobactin transporter permease ECP_0621 190 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 110644396 Common - succinyl-CoA synthetase beta chain ECP_4277 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 110643064 Common - hypothetical protein ECP_2909 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 110640612 Common - methylcitrate synthase ECP_0408 194 COG0372 GltA, Citrate synthase Energy production and conversion 110641213 Common - curli production assembly/transport component CsgG precursor ECP_1029 17 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 110644203 Common - DNA polymerase I ECP_4074 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 110640516 Common - putative transposase ECP_0311 19 None None None 110642890 Common ftsB cell divison protein FtsB ECP_2730 64 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 110643144 Common - probable transposase protein ECP_2990 61 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642153 Common - IS1400 transposase A ECP_1983 62 None None None 110643713 Common - hypothetical protein ECP_3566 88 COG1738 COG1738, Uncharacterized conserved protein Function unknown 110640325 Common - colicin immunity protein ECP_0114 8 None None None 110641546 Common - binding-protein-dependent transport system inner membrane component ECP_1364 164 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 110643782 Common - hypothetical protein YhjR ECP_3635 8 None None None 110643487 Common - regulatory protein CsrD ECP_3336 152 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110643058 Common - Z-ring-associated protein ECP_2903 47 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 110642739 Common - hypothetical transcriptional regulator YfiE ECP_2579 186 COG0583 LysR, Transcriptional regulator Transcription 110643463 Pathogen - hypothetical protein ECP_3312 2 None None None 110640902 Common fur ferric uptake regulator ECP_0703 196 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 110643606 Common nirD nitrite reductase small subunit ECP_3457 45 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 110644166 Common - hypothetical protein YahG ECP_4035 17 None None None 110644457 Common - PhnI protein ECP_4342 45 COG3626 PhnI, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 110643456 Common - N-acetylmannosamine kinase ECP_3305 136 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110642937 Common - hypothetical protein YgdH (possible lysine decarboxylase) ECP_2777 48 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 110641793 Common - hypothetical protein ECP_1619 5 None None None 110642571 Common - hypothetical protein YpdB ECP_2407 171 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 110641201 Common - hypothetical protein ECP_1017 27 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 110644717 Common - putative transcription regulator protein ECP_4610 43 COG1309 AcrR, Transcriptional regulator Transcription 110640348 Common - putative PTS system IIA component Yadi ECP_0137 45 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 110644544 Common - isovaleryl CoA dehydrogenase ECP_4432 143 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 110640763 Common - putative membrane protein YbbP ECP_0563 88 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 110642229 Common - protein YeeZ precursor ECP_2059 94 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110640531 Pathogen - putative regulatory helix-turn-helix protein, AraC family ECP_0326 1 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110643346 Common - protein YqjC precursor ECP_3193 19 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110640646 Common - hypothetical protein YaiC ECP_0444 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110642630 Common eutD phosphotransacetylase ECP_2470 165 COG0280 Pta, Phosphotransacetylase Energy production and conversion 110643123 Common - PixD protein ECP_2969 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110643637 Common envZ osmolarity sensor protein ECP_3490 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110644669 Common - DNA-binding response regulator ECP_4562 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110642145 Common - putative acyl-CoA dehydrogenase ECP_1975 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 110644827 Common - nicotinamide-nucleotide adenylyltransferase ECP_4774 31 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 110642875 Common - hypothetical protein YgbK (hypothetical type III effector Hrp-dependent outer proteins (Hop)) ECP_2715 57 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 110642947 Common - hypothetical protein YgdE ECP_2789 45 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 110642260 Common - predicted glycosyl transferase ECP_2090 88 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110642375 Common - hypothetical protein YeiN ECP_2205 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 110642638 Common - hypothetical protein YpfG precursor ECP_2478 16 None None None 110643769 Common - putative tRNA-processing ribonuclease (putative membrane protein YhjD) ECP_3622 50 COG1295 Rbn, Predicted membrane protein Function unknown 110643015 Common - xanthine dehydrogenase subunit XdhA ECP_2860 118 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 110644543 Common - putative glutathionylspermidine synthase YjfC ECP_4431 53 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 110640504 Common - F1C minor fimbrial subunit protein G presursor ECP_0298 16 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643355 Common - hypothetical protein YhaL ECP_3202 4 None None None 110644215 Common - hypothetical transcriptional regulator YihW ECP_4086 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110641068 Common - putative N-acetylmuramoyl-L-alanine amidase ECP_0882 107 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 110642034 Common - hypothetical protein ECP_1862 7 None None None 110641313 Common - isocitrate dehydrogenase ECP_1131 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 110643824 Common - 2,3-diketo-L-gulonate reductase ECP_3679 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 110640842 Common - citrate/succinate antiporter ECP_0643 105 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110642025 Common - UvrC excinuclease ABC subunit C ECP_1853 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 110642496 Common - hypothetical protein YfbS (putative transmembrane protein) ECP_2331 122 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110643499 Common - DeoR-family regulatory protein ECP_3348 109 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110642114 Common - yersiniabactin biosynthetic protein ECP_1943 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110641288 Common - hypothetical protein YcfR precursor ECP_1104 11 None None None 110642574 Common - hypothetical protein YpdE ECP_2410 91 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 110642269 Common - predicted glycosyl transferase ECP_2099 157 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110640687 Common - hypothetical transport protein YajR ECP_0487 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110640849 Common - sensor kinase DpiB ECP_0650 193 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 110644363 Common - aspartate kinase III ECP_4242 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 110643735 Common - oligopeptidase A ECP_3588 126 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 110642652 Common - dihydrodipicolinate synthase ECP_2492 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 110641759 Common - pyridoxamine kinase ECP_1581 67 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 110641043 Common - undecaprenyl pyrophosphate phosphatase ECP_0855 68 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 110641356 Pathogen - tail attachment protein minor capsid protein FII) ECP_1174 3 None None None 110641695 Common - hypothetical protein ECP_1517 10 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 110642804 Common - glycine betaine transporter membrane protein ECP_2644 193 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 110642927 Common - hybrid sensory histidine kinase BarA ECP_2767 226 COG4999 COG4999, Uncharacterized domain of BarA-like signal transduction histidine kinases Signal transduction mechanisms 110641059 Common - putrescine transporter subunit: membrane component of ABC superfamily ECP_0871 173 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 110643429 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase ECP_3276 220 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 110643736 Common - hypothetical protein YhiR ECP_3589 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 110644110 Common - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase ECP_3975 174 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 110643559 Common rplC 50S ribosomal protein L3 ECP_3408 231 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 162138277 Common mltA murein transglycosylase A ECP_2796 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 110641361 Pathogen - minor tail protein T ECP_1179 3 None None None 110641240 Common - glutaredoxin 2 ECP_1056 19 COG2999 GrxB, Glutaredoxin 2 Posttranslational modification, protein turnover, chaperones 110643865 Common - lipid A-core:surface polymer ligase WaaL ECP_3722 9 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 110641301 Common potB spermidine/putrescine ABC transporter membrane protein ECP_1119 219 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 110644031 Common - hypothetical protein ECP_3889 10 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 110643886 Common dinD DNA-damage-inducible protein D ECP_3743 21 None None None 110642291 Pathogen - hypothetical protein ECP_2121 2 None None None 110644253 Common - sulfate transporter subunit ECP_4126 88 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 110640628 Common - bacterial transferase hexapeptide ECP_0424 74 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 110640619 Common lacA galactoside O-acetyltransferase ECP_0415 215 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 110641777 Common - superoxide dismutase ECP_1601 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 110642971 Common - hypothetical protein ECP_2816 9 COG4104 COG4104, Uncharacterized conserved protein Function unknown 110643420 Common - RNA-binding protein YhbY ECP_3267 98 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 110641861 Common - endonuclease of nucleotide excision repair ECP_1687 213 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 110643260 Common - repressor protein for FtsI ECP_3106 84 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 110641221 Common - hypothetical protein YmdA precursor ECP_1037 6 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110644343 Common - hypothetical protein ECP_4222 59 COG0456 RimI, Acetyltransferases General function prediction only 110642161 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase ECP_1991 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 110644793 Common - C4-dicarboxylate-binding protein ECP_4686 101 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 110640729 Common - hypothetical protein ECP_0529 53 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 110642816 Common - carbon storage regulator ECP_2656 81 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 110643374 Common - DNA-binding transcriptional dual regulator ECP_3221 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110644349 Common metH B12-dependent methionine synthase ECP_4228 180 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 110640717 Common - hypothetical protein YbaA ECP_0517 39 COG5507 COG5507, Uncharacterized conserved protein Function unknown 110640810 Common - putative membrane protein YbdJ ECP_0611 6 None None None 110641328 Common - phage-related repressor protein ECP_1146 55 COG2932 COG2932, Predicted transcriptional regulator Transcription 110641662 Common - osmotically inducible protein C ECP_1484 91 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 110643971 Common - hemolysin D ECP_3829 123 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110643535 Common rpsD 30S ribosomal protein S4 ECP_3384 217 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 110643011 Common - 5-keto-4-deoxyuronate isomerase ECP_2856 28 COG3717 KduI, 5-keto 4-deoxyuronate isomerase Carbohydrate transport and metabolism 110644337 Common zraP zinc resistance protein ECP_4215 5 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 110641274 Common tdk thymidylate kinase ECP_1090 228 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 110641570 Common - transcriptional regulator, AraC family ECP_1390 84 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110642443 Common nrdB ribonucleotide-diphosphate reductase subunit beta ECP_2278 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 110640621 Common lacZ beta-D-galactosidase ECP_0417 71 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 110640749 Common - copper-transporting P-type ATPase ECP_0549 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 110642686 Common sseA 3-mercaptopyruvate sulfurtransferase ECP_2526 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 110641245 Common - virulence factor mviN-like protein ECP_1061 192 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 110643795 Common - phosphoethanolamine transferase ECP_3648 63 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110642008 Common - transcriptional activator FlhD ECP_1836 27 None None None 110644328 Common - thiamine-phosphate pyrophosphorylase ECP_4206 202 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 110641052 Common - predicted inner membrane protein ECP_0864 7 None None None 110643670 Common glgA glycogen synthase ECP_3523 133 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 110642300 Common - PTS system, galactitol-specific IIC component ECP_2130 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 110640275 Common - ribulokinase ECP_0064 80 COG1069 AraB, Ribulose kinase Energy production and conversion 110643578 Common - bacterioferritin-associated ferredoxin ECP_3427 24 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 110640782 Common - phosphoribosylaminoimidazole carboxylase ATPase subunit ECP_0582 191 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 110643029 Common - hypothetical protein YgfM ECP_2874 19 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 110642564 Common - hypothetical protein ECP_2400 6 None None None 110643111 Common - hypothetical protein ECP_2956 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 110643388 Common - hypothetical protein YraM (putative LppC putative lipoprotein) ECP_3235 40 COG3107 LppC, Putative lipoprotein General function prediction only 110644432 Common - hypothetical protein YjcO precursor ECP_4313 60 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 110643731 Common - universal stress protein UspB ECP_3584 12 None None None 110641812 Common - hypothetical transport protein YdiN ECP_1638 18 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644040 Common - predicted hydrolase ECP_3898 142 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 110642395 Common - hypothetical protein YejH ECP_2225 134 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 110641645 Common - nitrate reductase 2, gamma subunit ECP_1467 56 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 110643656 Common - predicted intramembrane serine protease ECP_3509 102 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 110640454 Pathogen - hypothetical protein ECP_0247 3 None None None 110642548 Common - VacJ lipoprotein precursor ECP_2383 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 110640979 Common - biotin synthase ECP_0789 182 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 110643433 Common - hypothetical protein YrbD precursor ECP_3280 96 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 110643552 Common rplP 50S ribosomal protein L16 ECP_3401 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 110640949 Common - peptidoglycan-associated outer membrane lipoprotein ECP_0752 148 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 110641964 Common - hypothetical protein YebE ECP_1790 33 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 110641402 Common - hypothetical protein YcgJ precursor ECP_1220 9 None None None 110641926 Common - hypothetical protein YoaB (putative translation initiation inhibitor) ECP_1752 105 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 110640446 Common - hypothetical protein ECP_0238 35 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 110644618 Common - DNA polymerase III subunit chi ECP_4508 49 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 110642124 Pathogen - hypothetical protein ECP_1953 1 None None None 110640963 Common - putative outer membrane or exported protein ECP_0773 6 None None None 110642299 Common - galactitol-1-phosphate dehydrogenase ECP_2129 189 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110642670 Common - inositol-5-monophosphate dehydrogenase ECP_2510 238 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 110642201 Pathogen - hypothetical protein ECP_2031 1 None None None 110640871 Common leuS leucyl-tRNA synthetase ECP_0672 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110642513 Common - histidine-binding periplasmic protein precursor ECP_2348 175 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 110642449 Common - anaerobic glycerol-3-phosphate dehydrogenase subunit B ECP_2284 32 COG3075 GlpB, Anaerobic glycerol-3-phosphate dehydrogenase Amino acid transport and metabolism 110640693 Common ampG muropeptide transporter ECP_0493 111 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 110642888 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ECP_2728 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 110644492 Common - DNA-binding transcriptional activator ECP_4377 82 COG3710 CadC, DNA-binding winged-HTH domains Transcription 110641851 Common - cell division modulator ECP_1677 6 None None None 110643086 Common - agmatinase ECP_2931 152 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 110640375 Common - glutamate-1-semialdehyde aminotransferase ECP_0164 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 110643813 Common - xylose isomerase ECP_3668 68 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 110644098 Common - putative ATP-dependent protease ECP_3961 199 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 110642587 Common - DNA-binding transcriptional activator ECP_2427 191 COG0583 LysR, Transcriptional regulator Transcription 110641868 Common - bifunctional succinylornithine transaminase/acetylornithine transaminase ECP_1694 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 110643790 Common - dipeptide transporter ECP_3643 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110641171 Common - DNA-binding transcriptional regulator ECP_0987 179 COG1278 CspC, Cold shock proteins Transcription 110641845 Common - hypothetical protein YdiZ ECP_1671 7 None None None 110643282 Common - hypothetical protein ECP_3128 21 COG5463 COG5463, Predicted integral membrane protein Function unknown 110643596 Common - hypothetical protein ECP_3447 86 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 110644237 Common - hypothetical protein ECP_4110 11 None None None 110642882 Common - RNA polymerase sigma factor RpoS ECP_2722 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 110643855 Common - hypothetical protein YibN (putative rhodanese-related protein) ECP_3712 99 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 110641001 Common - ATP-dependent RNA helicase RhlE ECP_0811 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 110643900 Common - putative fructose-bisphosphate aldolase class-II ECP_3757 171 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110641219 Common - cryptic curlin major subunit ECP_1035 12 None None None 110640817 Common entF enterobactin synthase subunit F ECP_0618 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110641168 Common - cytochrome BD-II oxidase subunit II ECP_0984 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 110641918 Common - hypothetical protein YeaR (putative cytoplasmic protein) ECP_1744 16 COG3615 TehB, Uncharacterized protein/domain, possibly involved in tellurite resistance Inorganic ion transport and metabolism 110641911 Common - hypothetical transcriptional regulator YeaM ECP_1737 70 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110641668 Common - probable zinc protease PqqL ECP_1490 200 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 110641896 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YdjJ ECP_1722 213 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110642728 Common era GTP-binding protein Era ECP_2568 227 COG1159 Era, GTPase General function prediction only 110642580 Common - hypothetical protein YpeC precursor ECP_2416 9 None None None 110641750 Common - Na(+)-translocating NADH-quinone reductase subunit E ECP_1572 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 110641954 Common - hypothetical protein YebV ECP_1780 10 None None None 110642738 Common - ATP-dependent RNA helicase SrmB ECP_2578 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 110644330 Common - anti-RNA polymerase sigma 70 factor ECP_4208 24 COG3160 Rsd, Regulator of sigma D Transcription 110644437 Common - putative dipeptide binding periplasmic protein ECP_4318 177 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 110640773 Common - putative purine permease YbbY ECP_0573 69 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 110644038 Common - galactonate operon transcriptional repressor ECP_3896 130 COG2186 FadR, Transcriptional regulators Transcription 110641577 Common - ATP-dependent RNA helicase DbpA ECP_1397 237 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 110640710 Common - putative multidrug transporter membrane\ATP-binding components ECP_0510 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 110643575 Common - transposase/IS protein ECP_3424 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110640307 Common ftsA cell division protein FtsA ECP_0096 181 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 110644380 Common - LexA repressor ECP_4261 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 110642185 Common - hypothetical protein ECP_2015 7 None None None 110642916 Common - hypothetical protein (hypothetical LemA-like protein) ECP_2756 132 COG1704 LemA, Uncharacterized conserved protein Function unknown 110643720 Common nikC nickel transporter permease NikC ECP_3573 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110640567 Common - hypothetical protein YcjY ECP_0362 48 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 110641718 Common - hypothetical transport protein YnfM ECP_1540 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643225 Common - hypothetical ATP-binding protein YghT ECP_3071 4 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 110641037 Common - hypothetical protein YliG ECP_0849 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 110642235 Common - imidazole glycerol-phosphate dehydratase/histidinol phosphatase ECP_2065 218 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 110641071 Common - L-allo-threonine aldolase, PLP-dependent ECP_0885 116 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 110640701 Common - transcriptional regulator HU subunit beta ECP_0501 200 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 110641838 Common rpmI 50S ribosomal protein L35 ECP_1664 24 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 110640934 Common kgd alpha-ketoglutarate decarboxylase ECP_0737 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 110642500 Common - acetate kinase ECP_2335 162 COG0282 ackA, Acetate kinase Energy production and conversion 110642693 Common iscA iron-sulfur cluster assembly protein ECP_2533 163 COG0316 IscA, Uncharacterized conserved protein Function unknown 110643515 Common - hypothetical amino-acid ABC transporter permease protein YhdX ECP_3364 172 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 110641563 Common - hypothetical protein YcjY ECP_1381 61 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 110643475 Common - p-hydroxybenzoic acid efflux subunit AaeB ECP_3324 46 COG1289 COG1289, Predicted membrane protein Function unknown 110644134 Common dapF diaminopimelate epimerase ECP_4003 202 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 110644060 Common - hypothetical protein YieL ECP_3918 30 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 110642940 Common - L-1,2-propanediol oxidoreductase ECP_2782 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 110644624 Common - Gnt-II system L-idonate transporter ECP_4514 79 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110640550 Common - SepA ECP_0345 35 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110644634 Pathogen - hypothetical protein ECP_4527 1 None None None 110642001 Common - chemotaxis regulator, protein-glutamate methyltransferase ECP_1829 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 110644789 Common - probable carbon starvation protein ECP_4682 105 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 110641537 Common pspF phage shock protein operon transcriptional activator ECP_1355 171 COG1221 PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 110640431 Common - hypothetical lipoprotein ECP_0223 3 None None None 110643951 Pathogen - hypothetical protein ECP_3809 1 None None None 110643020 Common - diaminopropionate ammonia-lyase ECP_2865 95 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 110640672 Common - nucleoside-specific channel-forming protein tsx precursor ECP_0470 18 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 110644577 Common - hypothetical protein YtfG ECP_4465 91 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110640377 Common - HesB family protein ECP_0166 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 110642390 Common - hypothetical ABC transporter permease protein YejE ECP_2220 218 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 110644490 Common - lysine decarboxylase, inducible ECP_4375 88 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 110643625 Common - hypothetical protein YrfA ECP_3478 6 None None None 110643406 Common rpsO 30S ribosomal protein S15 ECP_3253 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 110644807 Common rsmC 16S ribosomal RNA m2G1207 methyltransferase ECP_4754 151 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 110642835 Common - cryptic asc operon repressor ECP_2675 128 COG1609 PurR, Transcriptional regulators Transcription 110641767 Common - hypothetical protein ECP_1591 42 COG1289 COG1289, Predicted membrane protein Function unknown 110640401 Common lpxB lipid-A-disaccharide synthase ECP_0190 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 110642474 Common - menaquinone-specific isochorismate synthase ECP_2309 221 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110643899 Common - hypothetical protein ECP_3756 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110642729 Common rnc ribonuclease III ECP_2569 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 110641551 Common - putative beta-phosphoglucomutase ECP_1369 168 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 110640562 Common - hypothetical protein YkgK ECP_0357 4 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 110641080 Common - macrolide transporter ATP-binding /permease protein ECP_0894 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 110642530 Common - hypothetical protein YfcM ECP_2365 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 110641428 Common - dihydroxyacetone kinase subunit M ECP_1246 137 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 110642434 Common - hypothetical protein YfaP precursor ECP_2269 13 COG4676 COG4676, Uncharacterized protein conserved in bacteria Function unknown 110641478 Common cls cardiolipin synthetase ECP_1296 148 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 110642397 Common - nucleoid-associated protein NdpA ECP_2227 31 COG3081 COG3081, Nucleoid-associated protein General function prediction only 110642684 Common - penicillin-binding protein 1C ECP_2524 200 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 110643247 Common - hypothetical transcriptional regulator YqhC ECP_3093 132 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110642794 Common - hypothetical protein ECP_2634 8 None None None 110643692 Common - glycerol-3-phosphate transporter permease ECP_3545 151 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 110640832 Common - putative aminotransferase ECP_0633 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 110640536 Common - hypothetical protein ECP_0331 56 COG3596 COG3596, Predicted GTPase General function prediction only 110640977 Common - putative virulence protein GipA ECP_0787 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642351 Common - predicted inner membrane protein ECP_2181 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 110642481 Common - NADH dehydrogenase subunit M ECP_2316 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 110642741 Common - autonomous glycyl radical cofactor GrcA ECP_2581 52 COG3445 COG3445, Acid-induced glycyl radical enzyme General function prediction only 110641988 Common - protein YecO ECP_1814 54 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110642469 Common - O-succinylbenzoic acid--CoA ligase ECP_2304 215 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110642092 Pathogen - hypothetical protein ECP_1920 2 None None None 110641996 Common flhA flagellar biosynthesis protein A ECP_1824 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 110642212 Pathogen - hypothetical protein ECP_2042 2 None None None 110640908 Common - phosphoglucomutase ECP_0709 207 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 110641490 Common trpA tryptophan synthase subunit alpha ECP_1308 213 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 110643916 Common - putative transposase ECP_3774 82 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644000 Common - hypothetical protein ECP_3858 10 None None None 110642552 Common - sucrose-6-phosphate hydrolase ECP_2388 53 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 110644423 Common - cytochrome c-type protein NrfB ECP_4304 18 COG3303 NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit Inorganic ion transport and metabolism 110643180 Common - hypothetical protein ECP_3026 54 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643116 Common - putative P4-type integrase ECP_2962 104 COG0582 XerC, Integrase DNA replication, recombination, and repair 110640232 Common - putative cytoplasmic protein ECP_0019 7 None None None 110644837 Common - DNA-binding response regulator CreB ECP_4784 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110640499 Common - S-fimbrial protein subunit precursor ECP_0293 24 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641414 Common - D-amino acid dehydrogenase small subunit ECP_1232 119 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 110641376 Common - probable transcriptional regulator ECP_1194 75 COG1396 HipB, Predicted transcriptional regulators Transcription 110643949 Common - putative transposase ECP_3807 61 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641039 Common - hypothetical protein YliI precursor ECP_0851 119 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 110641970 Common - glucose-6-phosphate 1-dehydrogenase ECP_1796 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 110640429 Common rnhA ribonuclease H ECP_0220 178 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 110643787 Common - hypothetical transport protein YhjV ECP_3640 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110641602 Common - cytochrome b561 ECP_1422 33 COG3038 CybB, Cytochrome B561 Energy production and conversion 110642616 Common - N-acetylmuramoyl-l-alanine amidase I ECP_2456 179 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 110643178 Common - capsule polysaccharide export protein KpsC ECP_3024 30 COG3563 KpsC, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 110644267 Common hslU ATP-dependent protease ATP-binding subunit ECP_4140 214 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 110644080 Common - F0F1 ATP synthase subunit I ECP_3938 13 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 110641512 Common ribA GTP cyclohydrolase II ECP_1330 193 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 110642452 Common - hypothetical protein ECP_2287 8 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110641294 Common lolD lipoprotein transporter ATP-binding subunit ECP_1110 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 110643187 Pathogen - hypothetical protein ECP_3033 1 None None None 110641236 Common bssS biofilm formation regulatory protein BssS ECP_1052 11 None None None 110640674 Common - hypothetical protein ECP_0472 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 110643679 Common gntK gluconate kinase 1 ECP_3532 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 110644829 Common - putative bacterial regulatory protein, MerR family ECP_4776 38 COG2944 COG2944, Predicted transcriptional regulator Transcription 110640993 Common - cardiolipin synthase 2 ECP_0803 142 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 110640223 Common mogA molybdenum cofactor biosynthesis protein ECP_0010 184 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 110643582 Common - 30S ribosomal protein S7 ECP_3431 243 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 110642413 Common napG quinol dehydrogenase periplasmic component ECP_2246 65 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110641523 Common - hypothetical protein YciW ECP_1341 10 COG4950 COG4950, Uncharacterized protein conserved in bacteria Function unknown 110640594 Pathogen - hypothetical protein ECP_0389 1 None None None 110644198 Common - predicted kinase ECP_4069 50 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 110642965 Common - putative VGR-related protein ECP_2810 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 110642156 Pathogen - hypothetical protein ECP_1986 2 None None None 110644761 Common - FimG protein precursor ECP_4654 14 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640445 Common - hypothetical protein ECP_0237 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 110641561 Common - murein peptide amidase A ECP_1379 19 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 110641735 Common - mannose-6-phosphate isomerase ECP_1557 41 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 110644326 Common - sulfur carrier protein ThiS ECP_4204 11 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 110640947 Common tolA cell envelope integrity inner membrane protein TolA ECP_0750 19 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 110642950 Common - putative lipoprotein ECP_2792 13 None None None 110641309 Common - hypothetical protein ECP_1127 41 COG2915 COG2915, Uncharacterized protein involved in purine metabolism General function prediction only 110644277 Common - nucleoside-specific channel-forming protein tsx precursor ECP_4150 18 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 110640253 Common - L-carnitine/gamma-butyrobetaine antiporter ECP_0040 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 110641166 Common - hydrogenase-1 operon protein HyaF ECP_0982 19 None None None 110644206 Common - coproporphyrinogen III oxidase ECP_4077 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 110642272 Common - putative polysaccharide export protein wza precursor ECP_2102 124 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 110640743 Pathogen - hypothetical protein ECP_0543 1 None None None 110640940 Common - cytochrome D ubiquinol oxidase subunit I ECP_0743 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 110644520 Common - ribosome-associated GTPase ECP_4405 163 COG1162 COG1162, Predicted GTPases General function prediction only 110641180 Common torD chaperone protein TorD ECP_0996 17 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 110643889 Common gmk guanylate kinase ECP_3746 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 110644418 Common actP acetate permease ECP_4299 161 COG4147 DhlC, Predicted symporter General function prediction only 110640280 Common thiQ thiamin transporter ATP-binding subunit ECP_0069 249 COG3840 ThiQ, ABC-type thiamine transport system, ATPase component Coenzyme metabolism 110642628 Common - ethanolamine utilization protein EutN ECP_2468 43 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110644606 Common - aspartate carbamoyltransferase regulatory subunit ECP_4494 64 COG1781 PyrI, Aspartate carbamoyltransferase, regulatory subunit Nucleotide transport and metabolism 110643296 Common - glutamate-ammonia-ligase adenylyltransferase ECP_3142 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 110644675 Common - hypothetical protein ECP_4568 5 None None None 110644224 Common rbn ribonuclease BN ECP_4095 117 COG1295 Rbn, Predicted membrane protein Function unknown 110640412 Common - lipoprotein involved with copper homeostasis and adhesion ECP_0201 22 COG3015 CutF, Uncharacterized lipoprotein NlpE involved in copper resistance Cell envelope biogenesis, outer membrane / Inorganic ion transport and metabolism 110641196 Common - transcriptional regulator, TetR family ECP_1012 64 COG1309 AcrR, Transcriptional regulator Transcription 110644154 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase ECP_4023 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 110642959 Common - putative OmpA-family membrane protein ECP_2804 145 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 110643760 Common - hypothetical integral membrane protein YhiV ECP_3613 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110643849 Common lldD L-lactate dehydrogenase ECP_3706 133 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 110644632 Common - OmpA family protein ECP_4525 26 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 110642364 Common - hypothetical protein YeiG (putative esterase) ECP_2194 95 COG0627 COG0627, Predicted esterase General function prediction only 110643684 Common - hypothetical protein YhhZ ECP_3537 19 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 110643214 Common - acyl-CoA synthetase ECP_3060 191 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110641985 Common - hypothetical protein ECP_1811 124 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 110642719 Common - phosphoribosylformylglycinamidine synthase ECP_2559 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 110642193 Pathogen - hypothetical protein ECP_2023 3 None None None 110643138 Common - putative regulatory protein, DeoR family ECP_2984 95 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110643743 Common - putative heme/hemoglobin transport protein ECP_3596 40 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 110644461 Common - phosphonates transport system permease protein PhnE ECP_4346 92 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 110641027 Common - putative pyruvate formate-lyase 3 activating enzyme ECP_0837 60 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 110640385 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase ECP_0174 140 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 110640475 Common frsA fermentation/respiration switch protein ECP_0268 26 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 110642507 Common folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase ECP_2342 47 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 110644565 Common - putative permease ECP_4453 197 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643051 Common - glycine dehydrogenase ECP_2896 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 110642710 Common - hypothetical protein YphG ECP_2550 14 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 110643125 Common - PixH protein ECP_2971 7 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110640463 Common - hypothetical protein ECP_0256 33 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643805 Common - small toxic polypeptide ECP_3660 7 None None None 110643289 Common - hypothetical protein ECP_3135 3 None None None 110644784 Common - type I restriction enzyme EcoEI M protein ECP_4677 160 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 110644820 Common - phosphopentomutase ECP_4767 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 110641708 Common - hypothetical protein ECP_1530 80 COG1742 COG1742, Uncharacterized conserved protein Function unknown 110641458 Common - respiratory nitrate reductase 1 delta chain ECP_1276 54 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 110644260 Common - ferredoxin-NADP reductase ECP_4133 118 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 110642198 Pathogen - hypothetical protein ECP_2028 1 None None None 110640501 Common - F1C periplasmic chaperone ECP_0295 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110642281 Common - hypothetical protein YegK ECP_2111 11 None None None 110643200 Common - hypothetical type II secretion protein GspD ECP_3046 142 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 110643540 Common rplO 50S ribosomal protein L15 ECP_3389 70 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 110644219 Common - putative dehydrogenase ECP_4090 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110642886 Common surE stationary phase survival protein SurE ECP_2726 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 110642624 Common - ethanolamine utilization protein EutH ECP_2464 18 COG3192 EutH, Ethanolamine utilization protein Amino acid transport and metabolism 110643454 Common - hypothetical protein YhcG ECP_3303 50 COG4804 COG4804, Uncharacterized conserved protein Function unknown 110644484 Common - hypothetical protein Yjdi ECP_4369 19 COG3592 COG3592, Uncharacterized conserved protein Function unknown 110641340 Pathogen - hypothetical protein ECP_1158 1 None None None 110641016 Common - DNA starvation/stationary phase protection protein Dps ECP_0826 118 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 110644168 Pathogen - hypothetical protein YahE ECP_4037 1 None None None 110640397 Common - periplasmic chaperone ECP_0186 55 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 110641012 Common - predicted mechanosensitive channel ECP_0822 139 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110643168 Common - hypothetical protein YeeT ECP_3014 4 None None None 110643222 Common - hypothetical protein YghQ (putative polysaccharide biosynthesis protein) ECP_3068 12 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 110644128 Common hemC porphobilinogen deaminase ECP_3997 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 110641441 Common prfA peptide chain release factor 1 ECP_1259 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 110644776 Common - hypothetical protein YjiK ECP_4669 9 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 110644830 Common - putative ABC transporter ATP-binding protein ECP_4777 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 110640874 Common - glutamate/aspartate transport ATP-binding protein GltL ECP_0675 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 110642204 Common - putative FecCD-family membrane transport protein ECP_2034 172 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110641876 Common - hypothetical ABC transporter ATP-binding protein YnjD ECP_1702 249 COG4136 COG4136, ABC-type uncharacterized transport system, ATPase component General function prediction only 110644152 Common - hypothetical membrane protein YigM ECP_4021 38 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 110640268 Common - organic solvent tolerance protein ECP_0057 119 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 110642613 Common - hypothetical protein ECP_2453 11 None None None 110643106 Common ansB L-asparaginase II ECP_2951 140 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 110643478 Common - putative DNA-binding transcriptional regulator ECP_3327 180 COG0583 LysR, Transcriptional regulator Transcription 110643523 Common - hypothetical protein ECP_3372 40 COG2922 Smg, Uncharacterized protein conserved in bacteria Function unknown 110644140 Common - hypothetical protein YigE ECP_4009 24 COG3698 COG3698, Predicted periplasmic protein Function unknown 110644374 Common - maltose/maltodextrin transporter ATP-binding protein ECP_4253 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 110643651 Common - transcriptional regulator MalT ECP_3504 56 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 110644016 Common - sensory histidine kinase UhpB ECP_3874 146 COG3851 UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific Signal transduction mechanisms 110640868 Common nadD nicotinic acid mononucleotide adenyltransferase ECP_0669 166 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 110641416 Common - potassium/proton antiporter ECP_1234 114 COG3263 COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain Inorganic ion transport and metabolism 110641674 Pathogen - hypothetical protein ECP_1496 2 None None None 110641263 Common - Maf-like protein ECP_1079 194 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 110641637 Pathogen - hypothetical protein ECP_1459 2 None None None 110644503 Common - hypothetical protein YjeI precursor ECP_4388 17 None None None 110644375 Common lamB maltoporin ECP_4254 26 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 110644653 Common - hypothetical protein ECP_4546 2 None None None 110640387 Common - methionine aminopeptidase ECP_0176 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 110640313 Common - zinc-binding protein ECP_0102 60 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 110641041 Common - D-alanyl-D-alanine carboxypeptidase fraction C ECP_0853 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 110642594 Common - hypothetical protein YpeB ECP_2434 42 COG3530 COG3530, Uncharacterized protein conserved in bacteria Function unknown 110640587 Common - putative phage integrase ECP_0382 213 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 110643490 Common - hypothetical protein ECP_3339 10 COG2717 COG2717, Predicted membrane protein Function unknown 110643874 Common - 3-deoxy-D-manno-octulosonic-acid transferase ECP_3731 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 110644508 Common - entericidin B membrane lipoprotein ECP_4393 9 COG5510 COG5510, Predicted small secreted protein Function unknown 110641488 Common - protein YciF ECP_1306 37 COG3685 COG3685, Uncharacterized protein conserved in bacteria Function unknown 110641331 Common - replication protein O ECP_1149 9 None None None 110644403 Common - hypothetical protein YjbQ ECP_4284 126 COG0432 COG0432, Uncharacterized conserved protein Function unknown 110641959 Common - hypothetical protein ECP_1785 25 COG2372 CopC, Uncharacterized protein, homolog of Cu resistance protein CopC General function prediction only 110642767 Common rplS 50S ribosomal protein L19 ECP_2607 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 110644579 Common cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein ECP_4467 128 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 110643967 Pathogen - hypothetical protein ECP_3825 1 None None None 110641323 Common - bacteriophage recombination protein ECP_1141 11 None None None 110643568 Common - putative general secretion pathway protein H precursor ECP_3417 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110641057 Common potG putrescine transporter ATP-binding subunit ECP_0869 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 110643839 Common - hypothetical protein YibI ECP_3696 16 None None None 110644059 Common - putative 6-phosphogluconolactonase ECP_3917 68 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 110643413 Common - hypothetical protein ECP_3260 54 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110642369 Common - endonuclease IV ECP_2199 99 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 110641099 Common pflA pyruvate formate lyase-activating enzyme 1 ECP_0913 108 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 110642075 Common - transthyretin-like protein precursor ECP_1903 64 COG2351 COG2351, Transthyretin-like protein General function prediction only 110640958 Common - galactokinase ECP_0768 91 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 110640580 Common - putative electron transport protein YkgF ECP_0375 95 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 110643987 Common - putative transposase ECP_3845 12 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643913 Common - hypothetical protein ECP_3771 8 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643504 Common - tRNA-dihydrouridine synthase B ECP_3353 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 110641132 Common - alkanesulfonate transporter substrate-binding subunit ECP_0948 106 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 110644105 Common - peptidyl-prolyl cis-trans isomerase C ECP_3968 142 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 110640285 Common - isopropylmalate isomerase large subunit ECP_0074 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 110642939 Common xni exonuclease IX ECP_2781 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 110642311 Common - phosphomethylpyrimidine kinase ECP_2141 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 110644251 Common fieF ferrous iron efflux protein F ECP_4124 209 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 110641139 Common - paraquat-inducible protein A ECP_0955 56 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 110643585 Common - hypothetical protein ECP_3434 34 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 110642293 Common - hypothetical protein ECP_2123 5 None None None 110641934 Common - PTS system, mannose-specific IIAB component ECP_1760 88 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 110642536 Common - hypothetical protein YfcO precursor ECP_2371 3 None None None 110643661 Pathogen - hypothetical protein ECP_3514 2 None None None 110643272 Common - putative iron compound permease protein of ABC transporter family ECP_3118 189 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110641753 Common rnfD electron transport complex protein RnfD ECP_1575 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 110643592 Common - putative ABC transporter ATP-binding protein ECP_3443 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 110640778 Common - membrane protein FdrA ECP_0578 121 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 110644698 Common - DsdX permease ECP_4591 79 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110643151 Common - hypothetical protein ECP_2997 8 None None None 110642006 Common - flagellar motor protein MotA ECP_1834 121 COG1291 MotA, Flagellar motor component Cell motility and secretion 110642072 Common - chaperone protein HchA ECP_1900 47 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 110643233 Common - predicted maturation element for hydrogenase 2 ECP_3079 79 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 110641690 Common - multiple drug resistance protein MarC ECP_1512 159 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 110640719 Common - putative membrane protein YlaC ECP_0519 10 None None None 110640487 Common - phospho-2-dehydro-3-deoxyheptonate aldolase ECP_0281 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 110644629 Pathogen - hypothetical protein ECP_4522 1 None None None 110641889 Common ansA cytoplasmic asparaginase I ECP_1715 139 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 110640432 Common - hypothetical protein ECP_0224 26 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 110642601 Common - glucose-specific PTS system component ECP_2441 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 110641481 Common - YciI-like protein ECP_1299 75 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 110640490 Common - putative transposase ECP_0284 10 None None None 110644645 Common - chaperone protein PapD ECP_4538 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110641421 Common - TonB-dependent outer membrane receptor ECP_1239 99 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110644404 Common - putative cytoplasmic protein YjbR ECP_4285 36 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 110644287 Common - fructose-6-phosphate aldolase ECP_4160 113 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 110641153 Common mgsA methylglyoxal synthase ECP_0969 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 110644241 Common rhaB rhamnulokinase ECP_4114 99 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 110640381 Common dgt deoxyguanosinetriphosphate triphosphohydrolase ECP_0170 160 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 110641311 Common - putative nudix hydrolase YmfB ECP_1129 66 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 110643598 Common - hypothetical protein YhfK ECP_3449 56 COG1289 COG1289, Predicted membrane protein Function unknown 110642829 Common - anaerobic nitric oxide reductase transcription regulator ECP_2669 169 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 110643877 Common rpmG 50S ribosomal protein L33 ECP_3734 137 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 110643545 Common rpsH 30S ribosomal protein S8 ECP_3394 242 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 110640712 Common - ammonium transporter ECP_0512 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 110641089 Common - leucine-responsive transcriptional regulator ECP_0903 157 COG1522 Lrp, Transcriptional regulators Transcription 110641657 Common - hypothetical protein ECP_1479 41 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 110642525 Common - predicted flagella assembly protein ECP_2360 10 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110644751 Common - hypothetical protein YjhA precursor ECP_4644 10 None None None 110642433 Common - acetyl-CoA acetyltransferase ECP_2268 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 110644660 Common - hemolysin D ECP_4553 123 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 110642702 Common - hypothetical protein ECP_2542 54 COG2259 COG2259, Predicted membrane protein Function unknown 110642087 Common - hypothetical protein ECP_1915 24 None None None 110643295 Common - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase ECP_3141 180 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 110640791 Pathogen - hypothetical protein ECP_0591 1 None None None 110642100 Common - hypothetical protein ECP_1928 6 None None None 110641884 Common - chaperone protein HscC ECP_1710 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 110642856 Common - hypothetical protein ECP_2696 19 None None None 110643037 Common - isopentenyl-diphosphate delta-isomerase ECP_2882 51 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 110644002 Common - hypothetical protein ECP_3860 6 None None None 110644448 Common - ribose-5-phosphate isomerase B ECP_4333 129 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 110640239 Common - FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase ECP_0026 130 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 110642641 Common - nitrate/nitrite sensor protein NarQ ECP_2481 121 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 110643390 Common - DnaA initiator-associating protein DiaA ECP_3237 122 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 110641175 Common - hybrid sensory histidine kinase TorS ECP_0991 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110641961 Common - hypothetical protein YobB ECP_1787 7 COG0388 COG0388, Predicted amidohydrolase General function prediction only 110644533 Common - putative membrane protein YjeT ECP_4421 9 COG3242 COG3242, Uncharacterized protein conserved in bacteria Function unknown 110640858 Common - hypothetical protein ECP_0659 5 None None None 110641259 Common flgL flagellar hook-associated protein FlgL ECP_1075 103 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 110640735 Common adk adenylate kinase ECP_0535 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 110641802 Common - cysteine desulfurase activator complex subunit SufD ECP_1628 175 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 110642822 Common - PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components ECP_2662 22 COG3730 SrlA, Phosphotransferase system sorbitol-specific component IIC Carbohydrate transport and metabolism 110644078 Common - F0F1 ATP synthase subunit C ECP_3936 50 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 110644331 Common nudC NADH pyrophosphatase ECP_4209 109 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 110641948 Common - carboxy-terminal protease ECP_1774 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 110641699 Common - hypothetical protein ECP_1521 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110642321 Common - putative ATPase ECP_2151 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 110642013 Common araG L-arabinose transporter ATP-binding protein ECP_1841 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110640633 Common tauD taurine dioxygenase ECP_0431 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 110640358 Common - hypothetical protein YadL precursor ECP_0147 4 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643155 Common - hypothetical protein ECP_3001 4 None None None 110643940 Common - hypothetical protein ECP_3798 7 None None None 110642409 Common - cytochrome c-type biogenesis ATP-binding protein CcmA ECP_2242 235 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 110644481 Pathogen - hypothetical protein ECP_4366 1 None None None 110641572 Common - multidrug resistance protein B ECP_1392 185 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110640444 Common - hypothetical protein ECP_0236 12 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 110641817 Common - hypothetical transcriptional regulator YdiP ECP_1643 112 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110644605 Common - putative endoribonuclease L-PSP ECP_4493 183 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 110641836 Common pheS phenylalanyl-tRNA synthetase subunit alpha ECP_1662 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 110643608 Common cysG siroheme synthase ECP_3459 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 110641172 Common - hypothetical protein ECP_0988 3 None None None 110641422 Common - molybdenum transport protein ModD ECP_1240 198 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 110642647 Common - esterase YpfH ECP_2487 55 COG0400 COG0400, Predicted esterase General function prediction only 110642911 Common - sucrose porin precursor ECP_2751 26 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 110642877 Common - hypothetical protein ECP_2717 75 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 110640666 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase ECP_0464 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 110642846 Common - formate hydrogenlyase subunit 3 ECP_2686 206 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 110643465 Common rplM 50S ribosomal protein L13 ECP_3314 240 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 110642905 Common - hypothetical metabolite transport protein YgcS ECP_2745 79 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642732 Common - SoxR reducing system protein RseC ECP_2572 19 COG3086 RseC, Positive regulator of sigma E activity Signal transduction mechanisms 110643664 Common - putative minor fimbrial subunit precursor ECP_3517 19 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643534 Common - DNA-directed RNA polymerase subunit alpha ECP_3383 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 110643815 Common - D-xylose transport ATP-binding protein XylG ECP_3670 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110640480 Common - phage integrase ECP_0274 122 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 110644725 Common - putative Na+/H+ antiporter ECP_4618 45 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 110644475 Common - biodegradative arginine decarboxylase ECP_4360 86 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 110641781 Common - DNA-binding transcriptional repressor PurR ECP_1605 129 COG1609 PurR, Transcriptional regulators Transcription 110640698 Common clpP ATP-dependent Clp protease proteolytic subunit ECP_0498 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110644135 Common - hypothetical protein ECP_4004 32 COG3159 COG3159, Uncharacterized protein conserved in bacteria Function unknown 110640755 Common - hypothetical protein ECP_0555 220 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 110641913 Common - hypothetical protein YeaO (putative cytoplasmic protein) ECP_1739 77 COG3189 COG3189, Uncharacterized conserved protein Function unknown 110643274 Common - ferric enterobactin transport ATP-binding protein FepC ECP_3120 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 110640969 Common - 6-phosphogluconolactonase ECP_0779 52 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 110641026 Common - putative formate acetyltransferase 3 ECP_0836 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 110641819 Common - electron transfer flavoprotein subunit YdiR ECP_1645 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 110641325 Pathogen - prophage Kil protein ECP_1143 2 None None None 110643845 Common - hypothetical protein ECP_3702 3 None None None 110640815 Common - enterobactin/ferric enterobactin esterase ECP_0616 28 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 110643284 Common - arylsulfate sulfotransferase ECP_3130 10 None None None 110643532 Common - hypothetical protein ECP_3381 26 None None None 110642005 Common motB flagellar motor protein MotB ECP_1833 112 COG1360 MotB, Flagellar motor protein Cell motility and secretion 110643338 Common - putative minor pilin protein ECP_3185 4 None None None 110644491 Common - predicted lysine/cadaverine transporter ECP_4376 167 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110640369 Common - ATP-dependent RNA helicase HrpB ECP_0158 132 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 110640218 Pathogen - hypothetical protein ECP_0005 1 None None None 110642042 Common emrE multidrug efflux protein ECP_1870 134 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110640623 Common - hypothetical protein ECP_0419 31 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 110643903 Common - putative phosphotransferase system (PTS), fructose-specific ECP_3760 117 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 110642772 Common - putative cytochrome C-type biogenesis protein ECP_2612 57 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 110642709 Common - ABC transporter periplasmic binding protein YphF precursor ECP_2549 87 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110641003 Common dinG ATP-dependent DNA helicase DinG ECP_0813 126 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 110642482 Common - NADH dehydrogenase subunit L ECP_2317 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 110640838 Common - alkyl hydroperoxide reductase subunit F ECP_0639 245 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 110644581 Common - protein YtfJ precursor ECP_4469 18 COG3054 COG3054, Predicted transcriptional regulator General function prediction only 110642783 Common - hypothetical protein ECP_2623 117 COG0579 COG0579, Predicted dehydrogenase General function prediction only 110644334 Common - hypothetical protein YjaG ECP_4212 26 COG3068 COG3068, Uncharacterized protein conserved in bacteria Function unknown 110640737 Common - acetyl esterase ECP_0537 113 COG0657 Aes, Esterase/lipase Lipid metabolism 110642267 Common - predicted glycosyl transferase ECP_2097 22 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110644627 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YjgB ECP_4519 188 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 110640351 Common - putative transposase, YhgA-like ECP_0140 27 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110644425 Common - NrfD protein ECP_4306 28 COG3301 NrfD, Formate-dependent nitrite reductase, membrane component Inorganic ion transport and metabolism 110640994 Common - hypothetical protein YbhP ECP_0804 66 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 110641363 Common - minor tail protein M ECP_1181 13 COG4718 COG4718, Phage-related protein Function unknown 110643546 Common rpsN 30S ribosomal protein S14 ECP_3395 209 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 110641454 Common - hypothetical protein ECP_1272 2 None None None 110643590 Common - hypothetical protein YheV ECP_3439 21 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 110641145 Common - hypothetical protein ECP_0961 17 COG3120 COG3120, Uncharacterized protein conserved in bacteria Function unknown 110644622 Common - hypothetical protein YjgR ECP_4512 78 COG0433 COG0433, Predicted ATPase General function prediction only 110643056 Common - proline aminopeptidase P II ECP_2901 245 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 110644842 Common - hypothetical protein ECP_0844 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 110643676 Common - putative DNA processing protein ECP_3529 175 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 110641622 Common - binding-protein-dependent transport system inner membrane component ECP_1444 214 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 110644230 Pathogen - hypothetical protein ECP_4101 1 None None None 110641242 Common - ribosomal-protein-S5-alanine N-acetyltransferase ECP_1058 100 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 110641247 Common - anti-sigma28 factor FlgM ECP_1063 11 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 110641924 Common - hypothetical protease YeaZ ECP_1750 166 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 110641956 Common pphA serine/threonine protein phosphatase 1 ECP_1782 101 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 110641625 Common - putative inner membrane protein ECP_1447 8 None None None 110640652 Common - hypothetical protein ECP_0450 14 None None None 110644726 Common - putative transposase ECP_4619 7 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640511 Common - putative ATP binding cassette (ABC) transporter ECP_0305 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 110640241 Common - ribonucleoside hydrolase RihC ECP_0028 87 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 110640509 Common - IroE protein ECP_0303 30 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 110642011 Common - trehalose-6-phosphate phosphatase ECP_1839 90 COG1877 OtsB, Trehalose-6-phosphatase Carbohydrate transport and metabolism 110640784 Pathogen - hypothetical protein ECP_0584 2 None None None 110641120 Common - condesin subunit E ECP_0934 20 COG3095 MukE, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 110641341 Common - lysis protein S ECP_1159 5 None None None 110642558 Common - DNA-binding response regulator in two-component regulatory system with EvgS ECP_2394 142 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110643803 Common - putative transcriptional regulator ECP_3658 9 COG2944 COG2944, Predicted transcriptional regulator Transcription 110643837 Common - predicted glutathione S-transferase ECP_3694 80 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110640691 Common - cytochrome O ubiquinol oxidase subunit I ECP_0491 165 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 110641031 Common - L-asparaginase ECP_0841 84 COG1446 COG1446, Asparaginase Amino acid transport and metabolism 110644289 Common - PTS system, fructose-like-2 IIC component ECP_4162 67 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 110640677 Common nusB transcription antitermination protein NusB ECP_0475 196 COG0781 NusB, Transcription termination factor Transcription 110642102 Pathogen - hypothetical protein ECP_1930 2 None None None 110644783 Common - type I restriction enzyme EcoEI specificity protein ECP_4676 70 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 110641092 Common - recombination factor protein RarA ECP_0906 240 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 110641616 Common - putative peptidase ECP_1438 140 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 110642672 Common - putative outer membrane protein (RatA-like protein) ECP_2512 10 None None None 110641903 Common - hypothetical protein YeaE (putative oxidoreductase) ECP_1729 198 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 110640599 Common - hypothetical protein ECP_0394 1 None None None 110642511 Common - histidine transport system permease protein HisM ECP_2346 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 110640361 Common - putative chaperone protein EcpD ECP_0150 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110642205 Common - iron-chelating periplasmic-binding protein ECP_2035 75 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 110644345 Common - malate synthase ECP_4224 82 COG2225 AceB, Malate synthase Energy production and conversion 110642535 Common - hypothetical protein ECP_2370 71 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 110643229 Common - hypothetical protein ECP_3075 95 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110641038 Common bssR biofilm formation regulatory protein BssR ECP_0850 6 None None None 110640590 Common - hypothetical protein ECP_0385 1 None None None 110640726 Common - potassium efflux protein KefA ECP_0526 228 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110642887 Common truD tRNA pseudouridine synthase D ECP_2727 86 COG0585 COG0585, Uncharacterized conserved protein Function unknown 110644731 Pathogen - hypothetical protein ECP_4624 1 None None None 110640266 Common ksgA dimethyladenosine transferase ECP_0053 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 110642018 Common - hypothetical protein ECP_1846 1 None None None 110642680 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ECP_2520 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 110644498 Common aspA aspartate ammonia-lyase ECP_4383 219 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 110641810 Common - hypothetical protein YdiL ECP_1636 4 None None None 110642325 Common - hypothetical protein YehK ECP_2155 2 None None None 110644816 Common - hypothetical protein YjjW ECP_4763 70 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 110641846 Common - putative cytoplasmic protein (YniA) (hypothetical fructosamine kinase) ECP_1672 71 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 110644430 Common - IS putative transposase ECP_4311 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642742 Common - uracil-DNA glycosylase ECP_2582 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 110644435 Common - putative transporter, permease protein ECP_4316 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110642962 Common - putative VGR-related protein ECP_2807 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 110640457 Common - vertebrate C-lysozyme inhibitor ECP_0250 7 None None None 110643631 Common - putative membrane protein IgaA ECP_3484 11 None None None 110642308 Common - hypothetical sugar kinase YegV ECP_2138 53 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110642523 Common - hypothetical protein ECP_2358 167 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 110644305 Common - putative hippurate hydrolase ECP_4178 170 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 110642122 Common - hypothetical protein ECP_1951 1 None None None 110640914 Common - potassium-transporting ATPase subunit A ECP_0717 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 110642562 Common - putative oxalyl-CoA decarboxylase ECP_2398 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 110641081 Common - stationary phase/starvation inducible regulatory protein CspD ECP_0895 176 COG1278 CspC, Cold shock proteins Transcription 110641253 Common flgF flagellar basal body rod protein FlgF ECP_1069 121 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 110643319 Common - DNA-binding transcriptional repressor ECP_3166 125 COG1609 PurR, Transcriptional regulators Transcription 110644592 Common - inner membrane ABC transporter permease protein YjfF ECP_4480 126 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 110641269 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase ECP_1085 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110642870 Common - hypothetical protein ECP_2710 5 None None None 110641404 Common - putative cytoplasmic protein YcgL ECP_1222 35 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 110643146 Common - hypothetical protein ECP_2992 3 None None None 110641272 Common - 4-amino-4-deoxychorismate lyase ECP_1088 162 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 110642795 Common - hypothetical protein ECP_2635 16 COG4575 ElaB, Uncharacterized conserved protein Function unknown 110643570 Common - probable general secretion pathway protein J precursor ECP_3419 21 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 110643267 Common - sensor protein QseC ECP_3113 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110642545 Common fadI 3-ketoacyl-CoA thiolase ECP_2380 179 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 110641891 Common - hypothetical metabolite transport protein YdjE ECP_1717 166 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110644631 Common - hypothetical protein YjgX (putative sulfatase) ECP_4524 45 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 110642020 Common - ferritin ECP_1848 84 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 110641943 Pathogen - hypothetical protein ECP_1769 2 None None None 110644052 Common - multidrug efflux system protein MdtL ECP_3910 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642182 Common - putative truncated transposase ECP_2012 4 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644796 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YjjN ECP_4689 204 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 110641856 Common - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA ECP_1682 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 110642976 Common - hypothetical protein ECP_2821 15 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 110642786 Common - gamma-aminobutyrate transporter ECP_2626 185 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110640648 Common - hypothetical protein ECP_0446 96 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 110642035 Common - predicted inner membrane protein ECP_1863 46 COG2391 COG2391, Predicted transporter component General function prediction only 110643176 Common - polysialic acid transport protein KpsD precursor ECP_3022 80 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 110640618 Common - IS putative transposase ECP_0414 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640641 Common - putative membrane protein YaiZ ECP_0439 6 None None None 110642096 Common - hypothetical protein ECP_1924 3 None None None 110640682 Common - geranyltranstransferase ECP_0480 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 110643505 Common fis DNA-binding protein Fis ECP_3354 97 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 110643880 Common - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase ECP_3737 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 110643065 Common - hypothetical transcriptional regulator YgfI ECP_2910 88 COG0583 LysR, Transcriptional regulator Transcription 110640500 Common - putative minor F1C fimbrial subunit precursor ECP_0294 15 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110642384 Common - putative cobalamin synthesis protein ECP_2214 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 162138278 Common - hypothetical protein ECP_1224 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 110642589 Common - xanthosine permease ECP_2429 27 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 110640294 Common - hypothetical protein ECP_0083 144 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 110642223 Common - DNA gyrase inhibitor ECP_2053 27 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 110642831 Common - nitric oxide reductase ECP_2671 239 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 110642919 Common - hypothetical membrane spanning protein ECP_2759 88 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 110643013 Common - hypothetical transport protein YqeG ECP_2858 36 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 110642231 Common - antitoxin YefM ECP_2061 52 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 110642632 Common - ethanolamine utilization protein EutQ ECP_2472 19 COG4766 EutQ, Ethanolamine utilization protein Amino acid transport and metabolism 110643550 Common rpsQ 30S ribosomal protein S17 ECP_3399 237 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 110641784 Common - cyclopropane fatty acyl phospholipid synthase ECP_1608 135 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 110640483 Common - transposase/IS protein ECP_0277 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110642623 Common - reactivating factor for ethanolamine ammonia lyase ECP_2463 17 COG4819 EutA, Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition Amino acid transport and metabolism 110640346 Common - hypothetical ABC transporter ATP-binding protein YadG ECP_0135 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 110641129 Common ssuB aliphatic sulfonates transport ATP-binding subunit ECP_0945 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 110640544 Common - hypothetical protein ECP_0339 6 None None None 110642105 Common - hypothetical protein ECP_1933 7 None None None 110643002 Common - putative aldo/keto reductase ECP_2847 194 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 110642582 Common - nucleoside permease NupC ECP_2418 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 110640373 Common - iron-hydroxamate transporter substrate-binding subunit ECP_0162 41 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 110642642 Common - aminoglycoside/multidrug efflux system ECP_2482 178 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110641217 Common - hypothetical protein ECP_1033 1 None None None 110642372 Common rihB ribonucleoside hydrolase 2 ECP_2202 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 110643203 Common - putative prepilin peptidase ECP_3049 136 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110642995 Common thyA thymidylate synthase ECP_2840 139 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 110643007 Common - DNA-binding transcriptional regulator LysR ECP_2852 176 COG0583 LysR, Transcriptional regulator Transcription 110644235 Common - formate dehydrogenase accessory protein ECP_4108 136 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 110640300 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase ECP_0089 213 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 110640851 Common dcuC C4-dicarboxylate transporter DcuC ECP_0652 24 COG3069 DcuC, C4-dicarboxylate transporter Energy production and conversion 110643612 Common - hypothetical protein YhfU ECP_3463 11 COG1315 COG1315, Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain DNA replication, recombination, and repair 110641303 Pathogen - hypothetical protein ECP_1121 1 None None None 110644365 Pathogen - hypothetical protein ECP_4244 1 None None None 110644478 Common - hypothetical protein ECP_4363 40 COG3647 COG3647, Predicted membrane protein Function unknown 110640434 Common - IcmF-related protein ECP_0226 46 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 110641596 Common - putative dual specificity phosphatase ECP_1416 22 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 110640861 Common - D-alanyl-D-alanine carboxypeptidase fraction A ECP_0662 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 110641073 Common - HCP oxidoreductase, NADH-dependent ECP_0887 125 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 110644572 Common - putative membrane protein YtfB ECP_4460 14 COG3061 OapA, Cell envelope opacity-associated protein A Cell envelope biogenesis, outer membrane 110640569 Common - putative LysR-family transcriptional regulatory protein ECP_0364 118 COG0583 LysR, Transcriptional regulator Transcription 110642660 Common upp uracil phosphoribosyltransferase ECP_2500 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 110644270 Common - DNA-binding transcriptional regulator CytR ECP_4143 127 COG1609 PurR, Transcriptional regulators Transcription 110641045 Common - hypothetical protein YbjH precursor ECP_0857 2 None None None 110643822 Common - putative electron transport protein YsaA ECP_3677 151 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 110644205 Common - hypothetical protein ECP_4076 21 COG3078 COG3078, Uncharacterized protein conserved in bacteria Function unknown 110643557 Common rplW 50S ribosomal protein L23 ECP_3406 138 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 110642667 Common - hypothetical membrane protein ECP_2507 4 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 110643497 Common - putative sugar uptake ABC transporter periplasmic solute-binding protein ECP_3346 96 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110643527 Common - 16S rRNA methyltransferase B ECP_3376 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 110642665 Common - hypothetical protein YfgF (putative membrane protein) ECP_2505 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110644221 Common - putative transmembrane transport protein ECP_4092 135 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110640345 Common - carbonic anhydrase ECP_0134 117 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 110642929 Common - glucarate dehydratase related protein ECP_2769 50 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 110644368 Common - hypothetical lipoprotein YjbH precursor ECP_4247 23 None None None 110643477 Common - hypothetical protein ECP_3326 13 None None None 110643300 Common cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase ECP_3146 195 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 110644654 Common - hypothetical protein ECP_4547 15 None None None 110641207 Common - predicted outer membrane protein ECP_1023 18 None None None 110642607 Common - sulfate/thiosulfate transporter subunit ECP_2447 229 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 110643245 Common - cystathionine beta-lyase ECP_3091 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 110643324 Common - predicted glycosyl hydrolase ECP_3171 20 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 110644160 Common - transketolase ECP_4029 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 110644242 Common - L-rhamnose operon regulatory protein RhaS ECP_4115 143 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 110644594 Common - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase ECP_4482 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 110642718 Common - putative sensor-like histidine kinase YfhK ECP_2558 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110642257 Common - putative UDP-glucose lipid carrier transferase ECP_2087 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 110644511 Common ampC beta-lactamase ECP_4396 124 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 110642191 Common - hypothetical protein ECP_2021 4 None None None 110640462 Common - putative lipoprotein ECP_0255 127 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 110642157 Pathogen - hypothetical protein ECP_1987 1 None None None 110644034 Common - D-galactonate transporter ECP_3892 197 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110643641 Common feoA ferrous iron transport protein A ECP_3494 33 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 110644096 Common - transcriptional regulator HdfR ECP_3959 184 COG0583 LysR, Transcriptional regulator Transcription 110640635 Common - puative autotransporter/pertactin ECP_0433 59 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110644411 Common - hypothetical protein ECP_4292 1 None None None 110643754 Common hdeB acid-resistance protein ECP_3607 5 None None None 110642150 Pathogen - hypothetical protein ECP_1980 1 None None None 110642387 Common - hypothetical protein ECP_2217 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110641524 Common - enoyl-(acyl carrier protein) reductase ECP_1342 230 COG0623 FabI, Enoyl- acyl-carrier-protein 110640980 Common - 8-amino-7-oxononanoate synthase ECP_0790 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 110644213 Common - hypothetical protein YihM ECP_4084 10 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 110643439 Common - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase ECP_3286 106 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 110643252 Common - hypothetical protein ECP_3098 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 110642044 Common fliF flagellar MS-ring protein ECP_1872 126 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 110640527 Common - putative IS orf ECP_0322 2 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644115 Common - glucose-1-phosphate thymidylyltransferase ECP_3980 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 110643074 Common - ABC transporter permease protein ECP_2919 19 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 110644351 Pathogen - hypothetical protein ECP_4230 2 None None None 110640927 Common - hypothetical protein ECP_0730 2 None None None 110643682 Common - putative oxidoreductase YhhX ECP_3535 168 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 110640479 Common proA gamma-glutamyl phosphate reductase ECP_0272 192 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 110640685 Common - 2-dehydropantoate 2-reductase ECP_0485 110 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 110642897 Common - sulfite reductase [NADPH] hemoprotein beta-component ECP_2737 136 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 110642179 Common - hypothetical protein ECP_2009 7 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 110643738 Pathogen - hypothetical protein ECP_3591 1 None None None 110641223 Common - hypothetical protein YmdC (phopholipase D-family protein) ECP_1039 147 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 110641579 Common - truncated putative prophage integrase ECP_1399 33 None None None 110644359 Common - sorbitol-6-phosphate 2-dehydrogenase ECP_4238 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110642532 Common mepA penicillin-insensitive murein endopeptidase ECP_2367 39 COG3770 MepA, Murein endopeptidase Cell envelope biogenesis, outer membrane 110640305 Common ddl D-alanine--D-alanine ligase ECP_0094 217 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 110641295 Common - N-acetyl-D-glucosamine kinase ECP_1113 144 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110640807 Common - putative transporter containing mechanosensitive ion channel domain ECP_0608 96 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 110640938 Common - hypothetical protein ECP_0741 18 COG0457 NrfG, FOG: TPR repeat General function prediction only 110644394 Common - probable dihydrolipoamide succinyltransferase ECP_4275 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 110643922 Pathogen - hypothetical protein ECP_3780 1 None None None 110642861 Common - transposase ECP_2701 56 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643107 Common - hypothetical protein ECP_2952 14 None None None 110643369 Common - alpha-dehydro-beta-deoxy-D-glucarate aldolase ECP_3216 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 110640608 Common - LysE family translocator, putative ECP_0404 98 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 110641431 Common - DNA-binding transcriptional regulator DhaR ECP_1249 173 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 110641374 Common - iron transport protein, periplasmic-binding protein ECP_1192 176 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 110640427 Common - predicted hydroxyacylglutathione hydrolase ECP_0218 207 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 110643990 Common - hypothetical protein ECP_3848 8 None None None 110640323 Common - aromatic amino acid transporter ECP_0112 171 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110643098 Common - Holliday junction resolvase-like protein ECP_2943 184 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 110643924 Common - putative F17-like fimbril adhesin subunit ECP_3782 10 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110643654 Common - transcriptional regulatory protein RtcR ECP_3507 163 COG4650 RtcR, Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 110644310 Common btuB vitamin B12/cobalamin outer membrane transporter ECP_4183 128 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 110642142 Common - probable polyketide synthase protein ECP_1972 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110641386 Common - hypothetical protein YmgC ECP_1204 1 None None None 110640768 Common - glyoxylate carboligase ECP_0568 221 COG3960 COG3960, Glyoxylate carboligase General function prediction only 110643646 Common - gluconate periplasmic binding protein ECP_3499 156 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 110644718 Common - putative transposase OrfB protein of insertion sequence IS629 ECP_4611 141 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110640655 Common rdgC recombination associated protein ECP_0453 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 110644546 Common - hypothetical lipoprotein YjfO precursor ECP_4434 9 None None None 110643027 Common - hypothetical protein YgfK ECP_2872 210 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 110643343 Common - DNA-binding transcriptional repressor ExuR ECP_3190 132 COG2186 FadR, Transcriptional regulators Transcription 110640320 Common - quinolinate phosphoribosyltransferase ECP_0109 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 110641772 Common - N-ethylmaleimide reductase, FMN-linked ECP_1596 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 110641350 Pathogen - head-to-tail joining protein W ECP_1168 4 None None None 110644018 Pathogen - hypothetical membrane protein ECP_3876 2 None None None 110642215 Common - putative radC-like protein YeeS ECP_2045 173 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 110642336 Common - putative inner membrane protein ECP_2166 4 None None None 110643130 Common - regulatory protein ECP_2976 166 COG4192 COG4192, Signal transduction histidine kinase regulating phosphoglycerate transport system Signal transduction mechanisms 110643778 Common - endo-1,4-D-glucanase ECP_3631 33 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 110643382 Common kbaY tagatose-bisphosphate aldolase ECP_3229 178 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110643468 Common - serine endoprotease ECP_3317 221 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 110644684 Common - hypothetical protein ECP_4577 4 None None None 162138281 Common prfH peptide chain release factor-like protein ECP_0265 215 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 110640514 Common - transposase InsG for insertion sequence element IS4 ECP_0308 14 None None None 110643453 Common gltD glutamate synthase subunit beta ECP_3302 211 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 110642551 Common - aminoimidazole riboside kinase ECP_2387 181 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 110643047 Common - putative global regulator ECP_2892 100 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 110642297 Common - lipid kinase ECP_2127 108 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 110644534 Common - adenylosuccinate synthetase ECP_4422 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 110644398 Common - putative sodium:sulfate symporter transmembrane protein ECP_4279 101 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110641312 Common - 23S rRNA pseudouridine synthase E ECP_1130 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 110643258 Common - putative C4-dicarboxylate transport system ECP_3104 36 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 110640228 Common - chaperone protein DnaJ ECP_0015 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 110640829 Common - carbon starvation protein A ECP_0630 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 110640558 Common - hypothetical protein YagW ECP_0353 4 None None None 110642952 Common - hypothetical protein YgdK (putative SufE protein probably involved in Fe-S center assembly) ECP_2794 94 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 110644117 Common - TDP-4-oxo-6-deoxy-D-glucose transaminase ECP_3982 200 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 110640492 Pathogen - hypothetical protein ECP_0286 1 None None None 110643525 Common def peptide deformylase ECP_3374 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 110641632 Common - L-asparagine permease ECP_1454 174 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 110644644 Pathogen - protein PapJ precursor ECP_4537 1 None None None 110644771 Common - isoaspartyl dipeptidase ECP_4664 44 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 110644553 Common ulaD 3-keto-L-gulonate-6-phosphate decarboxylase ECP_4441 53 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 110643937 Common - putative transposase ECP_3795 40 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643853 Common - preprotein translocase subunit SecB ECP_3710 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 110641382 Common - hypothetical protein YcgF ECP_1200 143 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110644248 Common cpxA two-component sensor protein ECP_4121 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110641550 Common - hypothetical glycosyl hydrolase ECP_1368 50 COG1554 ATH1, Trehalose and maltose hydrolases (possible phosphorylases) Carbohydrate transport and metabolism 110642597 Common - putative sulfate transport protein CysZ ECP_2437 48 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 110644009 Common - hypothetical protein ECP_3867 5 None None None 110642986 Common RecD exonuclease V subunit alpha ECP_2831 141 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 110640745 Common - hypothetical protein YbaP ECP_0545 40 COG3735 COG3735, Uncharacterized protein conserved in bacteria Function unknown 110644322 Common rpoB DNA-directed RNA polymerase subunit beta ECP_4200 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 110641155 Common - hypothetical protein YccU ECP_0971 132 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 110641482 Common - membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins ECP_1300 31 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 110643307 Common - putative tartrate carrier ECP_3153 73 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110641116 Common - hypothetical protein ECP_0930 10 None None None 110640525 Common - putative IS orf ECP_0320 45 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641212 Common - putative membrane protein YcdZ ECP_1028 16 None None None 110644377 Common ubiC chorismate pyruvate lyase ECP_4256 18 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 110642850 Common - hydrogenase nickel incorporation protein HypB ECP_2690 136 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 110641501 Common - cob(I)yrinic acid a,c-diamide adenosyltransferase ECP_1319 138 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 110642058 Common - hypothetical protein ECP_1886 10 None None None 110643751 Common - putative permease of iron compound ABC transport system ECP_3604 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110640975 Common - putative lipoprotein ECP_0785 18 COG4677 PemB, Pectin methylesterase Carbohydrate transport and metabolism 110643719 Common - nickel transporter permease NikB ECP_3572 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110642117 Common - yersiniabactin siderophore biosynthetic protein YbtE ECP_1946 221 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 110642144 Common - putative malonyl-CoA transacylase ECP_1974 206 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 110644227 Common - acetyl-hydrolase ECP_4098 130 COG0657 Aes, Esterase/lipase Lipid metabolism 110640606 Common - hypothetical zinc-type alcohol dehydrogenase-like protein YahK ECP_0401 193 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 110641666 Common - amino acid antiporter ECP_1488 114 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110641829 Common - hypothetical protein YdiV ECP_1655 8 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110643372 Common - putative regulator PrlF ECP_3219 12 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 110642461 Common - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ECP_2296 206 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 110641636 Common - Rhs/Vgr-family protein ECP_1458 58 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 110640359 Common - hypothetical protein YadM precursor ECP_0148 3 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641716 Common - Mlc protein ECP_1538 166 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110643741 Common - outer membrane protein Slp precursor ECP_3594 30 COG3065 Slp, Starvation-inducible outer membrane lipoprotein Cell envelope biogenesis, outer membrane 110644463 Common - phosphonate/organophosphate ester transporter subunit ECP_4348 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 110643114 Common - ornithine decarboxylase, constitutive ECP_2959 84 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 110643816 Common - xylose transport system permease protein XylH ECP_3671 109 COG4214 XylH, ABC-type xylose transport system, permease component Carbohydrate transport and metabolism 110644370 Common - phosphate-starvation-inducible protein PsiE ECP_4249 21 COG3223 COG3223, Predicted membrane protein Function unknown 110644220 Common - hypothetical membrane protein ECP_4091 68 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642054 Common fliP flagellar biosynthesis protein FliP ECP_1882 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 110642275 Common dcd deoxycytidine triphosphate deaminase ECP_2105 158 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 110643548 Common rplX 50S ribosomal protein L24 ECP_3397 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 110640700 Common - DNA-binding ATP-dependent protease La ECP_0500 216 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 110642340 Common - hypothetical protein YehZ precursor ECP_2170 90 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 110642603 Common - hypothetical protein ECP_2443 6 None None None 110641946 Common - hypothetical transport protein YebQ ECP_1772 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110640764 Common - tRNA 2-selenouridine synthase ECP_0564 65 COG2603 COG2603, Predicted ATPase General function prediction only 110642060 Common - mannosyl-3-phosphoglycerate phosphatase ECP_1888 30 COG3769 COG3769, Predicted hydrolase (HAD superfamily) General function prediction only 110642946 Common - L-fucose operon activator ECP_2788 108 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110642423 Common - ADA regulatory protein ECP_2256 188 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 110644737 Common - hypothetical protein ECP_4630 16 None None None 110644298 Common argC N-acetyl-gamma-glutamyl-phosphate reductase ECP_4171 216 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 110642493 Common - probable transcriptional regulator lrhA ECP_2328 134 COG0583 LysR, Transcriptional regulator Transcription 110643194 Common - hypothetical type II secretion protein GspJ ECP_3040 34 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 110640391 Common frr ribosome recycling factor ECP_0180 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 110642725 Common acpS 4'-phosphopantetheinyl transferase ECP_2565 136 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 110640477 Common - outer membrane phosphoporin protein E ECP_0270 29 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110644559 Common rpsR 30S ribosomal protein S18 ECP_4447 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 110644568 Common - 3-hydroxybutyryl-CoA dehydratase ECP_4456 181 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 110640863 Common - cell wall shape-determining protein ECP_0664 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 110640319 Common - putative major pilin subunit ECP_0108 38 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 110641449 Common - cation transport protein ChaC ECP_1267 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 110641953 Common yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF ECP_1779 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 110643217 Common - hypothetical aminotransferase, class II ECP_3063 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 110641977 Common znuB high-affinity zinc transporter membrane component ECP_1803 178 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 110643569 Common - probable general secretion pathway protein I precursor ECP_3418 12 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110641762 Common anmK anhydro-N-acetylmuramic acid kinase ECP_1586 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 110642436 Common - hypothetical protein YfaS precursor ECP_2271 52 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 110642080 Pathogen - hypothetical protein ECP_1908 1 None None None 110643166 Common - hypothetical protein YfjX (possible anti-restriction protein) ECP_3012 16 None None None 110642399 Common - putative sulphatase ECP_2229 30 COG3083 COG3083, Predicted hydrolase of alkaline phosphatase superfamily General function prediction only 110641465 Common - UTP--glucose-1-phosphate uridylyltransferase subunit GalU ECP_1283 230 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 110643156 Pathogen - hypothetical protein ECP_3002 1 None None None 110643416 Common glmM phosphoglucosamine mutase ECP_3263 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 110643340 Common - hypothetical protein ECP_3187 4 None None None 110640233 Common nhaA pH-dependent sodium/proton antiporter ECP_0020 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 110641018 Common ompX outer membrane protein X ECP_0828 11 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 110641721 Common - multidrug efflux system protein MdtI ECP_1543 94 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 110640891 Common - possible membrane transport protein ECP_0692 89 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110642788 Common - hypothetical protein ECP_2628 59 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 110641878 Common - hypothetical protein YnjF (probable CDP-alcohol phosphatidyltransferase ECP_1704 52 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 110640315 Common coaE dephospho-CoA kinase ECP_0104 204 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 110644487 Common - hypothetical protein YjdO ECP_4372 9 None None None 110644099 Common - acetolactate synthase 2 catalytic subunit ECP_3962 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 110642502 Common - hypothetical protein ECP_2337 45 COG1288 COG1288, Predicted membrane protein Function unknown 110643087 Common - hypothetical protein ECP_2932 7 None None None 110643834 Common - putative alcohol dehydrogenase ECP_3691 175 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 110641664 Common - hypothetical protein ECP_1486 14 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110642317 Common - hypothetical outer membrane usher protein YehB precursor ECP_2147 37 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110640589 Pathogen - hypothetical protein ECP_0384 1 None None None 110640303 Common murG N-acetylglucosaminyl transferase ECP_0092 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 110642164 Common - putative outer membrane receptor for iron compound or colicin ECP_1994 130 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 110640396 Common - outer membrane protein assembly factor YaeT ECP_0185 162 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 110642858 Common - hypothetical protein ECP_2698 2 None None None 110642440 Common - 3-demethylubiquinone-9 3-methyltransferase ECP_2275 173 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 110643955 Pathogen - CS12 fimbria chaperone protein ECP_3813 1 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110641617 Common - hypothetical protein YncJ precursor ECP_1439 4 None None None 110640468 Common - putative antitoxin of the YafO-YafN toxin-antitoxin system ECP_0261 11 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 110641440 Common hemA glutamyl-tRNA reductase ECP_1258 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 110640875 Common - glutamate/aspartate transport system permease protein GltK ECP_0676 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 110641396 Common - part of hypothetical protein b2647 (putative autotransporter) ECP_1214 9 None None None 110640292 Pathogen - hypothetical fruR/shl operon leader peptide ECP_0081 2 None None None 110644757 Common - fimbrin-like protein fimI precursor ECP_4650 20 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110642765 Common - hypothetical protein YfiN ECP_2605 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110641134 Common - dihydroorotate dehydrogenase 2 ECP_0950 227 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 110643479 Common - suppresses inhibitory activity of CsrA (TldD protein) ECP_3328 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 110644057 Common - predicted hydrolase ECP_3915 144 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 110640259 Common - glutathione-regulated potassium-efflux system ancillary protein KefF ECP_0046 76 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 110640637 Common - beta-lactamase/D-alanine carboxypeptidase ECP_0435 110 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 110640798 Common - bacteriophage N4 receptor, outer membrane subunit ECP_0599 10 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 110644656 Common - probable transposase protein ECP_4549 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641069 Common - putative nucleotide di-P-sugar epimerase or dehydratase ECP_0883 125 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 110642621 Common - ethanolamine ammonia-lyase small subunit ECP_2461 54 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 110640415 Common - prolyl-tRNA synthetase ECP_0204 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110644028 Common - hypothetical protein ECP_3886 57 COG2985 COG2985, Predicted permease General function prediction only 110642593 Common - hypothetical protein YfdH ECP_2433 59 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 110643964 Common - putative ABC-transporter ATP-binding protein ECP_3822 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 110641647 Common - respiratory nitrate reductase 2 beta chain ECP_1469 150 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 110641127 Common asnC asparaginyl-tRNA synthetase ECP_0941 236 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 110641337 Common - endodeoxyribonuclease RUS ECP_1155 7 COG4570 Rus, Holliday junction resolvase DNA replication, recombination, and repair 110643428 Common - DNA-binding transcriptional activator of maltose metabolism ECP_3275 22 COG3423 Nlp, Predicted transcriptional regulator Transcription 110643249 Common dkgA 2,5-diketo-D-gluconate reductase A ECP_3095 187 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 110644108 Common trxA thioredoxin ECP_3973 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 110644750 Common - hypothetical protein YjhT precursor ECP_4643 21 COG3055 COG3055, Uncharacterized protein conserved in bacteria Function unknown 110644271 Common - primosome assembly protein PriA ECP_4144 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 110644526 Common - N-acetylmuramoyl-l-alanine amidase II ECP_4414 165 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 110643864 Common - ADP-heptose:LPS heptosyl transferase I ECP_3721 87 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 110642236 Common hisH imidazole glycerol phosphate synthase subunit HisH ECP_2066 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 110641182 Common - insertion element (orfB) ECP_0998 137 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643049 Common - hypothetical protein ECP_2894 16 COG3097 COG3097, Uncharacterized protein conserved in bacteria Function unknown 110641568 Common - fumarate/nitrate reduction transcriptional regulator ECP_1388 159 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 110642695 Common - cysteine desulfurase ECP_2535 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 110642757 Common rluD 23S rRNA pseudouridine synthase D ECP_2597 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 110644090 Common - D-ribose transporter ATP binding protein ECP_3948 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110641058 Common - putrescine transporter subunit: membrane component of ABC superfamily ECP_0870 209 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 110643543 Common rplR 50S ribosomal protein L18 ECP_3392 209 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 110644563 Common - hypothetical protein ECP_4451 16 None None None 110643721 Common nikD nickel transporter ATP-binding protein ECP_3574 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 110640384 Common - hypothetical UPF0325 protein YaeH ECP_0173 17 None None None 110641506 Pathogen - hypothetical protein ECP_1324 2 None None None 110643431 Common - hypothetical protein YrbB ECP_3278 11 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 110641131 Common - alkanesulfonate monooxygenase ECP_0947 85 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 110644764 Pathogen - hypothetical protein ECP_4657 1 None None None 110644711 Common - hypothetical protein ECP_4604 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110643353 Common - putative transcriptional regulator, LysR family ECP_3200 153 COG0583 LysR, Transcriptional regulator Transcription 110641255 Common flgH flagellar basal body L-ring protein ECP_1071 97 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 110644517 Common - hypothetical transporter YjeM ECP_4402 48 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110642716 Common - hypothetical protein Yfha (putative transcriptional regulator) ECP_2556 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 110641160 Common - hypothetical protein ECP_0976 129 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 110641741 Common - 7-alpha-hydroxysteroid dehydrogenase ECP_1563 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110644677 Common - hypothetical protein ECP_4570 2 None None None 110643298 Common - hypothetical protein YgiF ECP_3144 58 COG3025 COG3025, Uncharacterized conserved protein Function unknown 110642981 Common - putative aminotransferase ECP_2826 232 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 110643450 Common - isoprenoid biosynthesis protein with amidotransferase-like domain ECP_3297 38 COG3155 ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 110643448 Common - hypothetical protein ECP_3295 7 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 110643034 Common - putative electron transport protein YgfS ECP_2879 159 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 110644808 Common - DNA polymerase III subunit psi ECP_4755 19 COG3050 HolD, DNA polymerase III, psi subunit DNA replication, recombination, and repair 110641169 Common - phosphoanhydride phosphorylase ECP_0985 17 None None None 110642700 Common - stationary phase inducible protein CsiE ECP_2540 12 COG3711 BglG, Transcriptional antiterminator Transcription 110643132 Common - transporter protein ECP_2978 90 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110640757 Common - hypothetical protein ECP_0557 70 COG0390 COG0390, ABC-type uncharacterized transport system, permease component General function prediction only 110640935 Common - dihydrolipoamide acetyltransferase ECP_0738 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 110644185 Common - DNase TatD ECP_4054 233 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 110644156 Pathogen - hypothetical protein ECP_4025 4 None None None 110641680 Common - DNA-binding transcriptional regulator ECP_1502 18 COG1476 COG1476, Predicted transcriptional regulators Transcription 110641939 Common rrmA 23S rRNA methyltransferase A ECP_1765 94 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110641285 Common - NADH dehydrogenase ECP_1101 214 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 110642509 Common - hypothetical protein YfcI ECP_2344 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110643909 Common - putative type II 5-cytosoine methyltransferase ECP_3767 136 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 110641456 Common - respiratory nitrate reductase 1 alpha chain ECP_1274 114 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 110640955 Common - phospho-2-dehydro-3-heoxyheptonate aldolase ECP_0765 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 110641185 Common - glucose-1-phosphatase/inositol phosphatase ECP_1001 17 None None None 110641736 Common - hypothetical protein YdgA ECP_1558 19 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 110644174 Common - hypothetical protein ECP_4043 76 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 110641194 Common - hypothetical isochorismatase family protein YcdL ECP_1010 114 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 110640929 Pathogen - hypothetical protein ECP_0732 2 None None None 110643120 Pathogen - PixG protein ECP_2966 1 None None None 110640942 Common - hypothetical protein ECP_0745 15 COG4890 COG4890, Predicted outer membrane lipoprotein Function unknown 110640847 Common - citrate lyase subunit gamma ECP_0648 25 COG3052 CitD, Citrate lyase, gamma subunit Energy production and conversion 110640630 Common - LmbE-like protein ECP_0426 61 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 110641882 Common - putative TPR repeat protein ECP_1708 102 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 110644667 Common - hypothetical protein ECP_4560 123 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 110644458 Common phnH carbon-phosphorus lyase complex subunit ECP_4343 42 COG3625 PhnH, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 110643942 Common - putative regulatory protein ECP_3800 13 COG3311 AlpA, Predicted transcriptional regulator Transcription 110642245 Common - putative glycosyltransferase ECP_2075 64 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110643791 Common - dipeptide transporter permease DppB ECP_3644 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110643182 Common - capsule export protein KpsC ECP_3028 30 COG3563 KpsC, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 110642331 Common - hypothetical lipoprotein YehR precursor ECP_2161 8 COG4808 COG4808, Uncharacterized protein conserved in bacteria Function unknown 110641412 Common - fatty acid metabolism regulator ECP_1230 62 COG2186 FadR, Transcriptional regulators Transcription 110644312 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase ECP_4186 202 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 110641656 Common - putative HTH-type transcriptional regulator YddM ECP_1478 59 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 110640442 Common - hypothetical protein ECP_0234 45 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 110642392 Common - hypothetical protein ECP_2222 11 None None None 110642611 Common murP N-acetylmuramic acid phosphotransfer permease ECP_2451 47 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 110642806 Common - putative transmembrane transport protein ECP_2646 160 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110644327 Common - adenylyltransferase ThiF ECP_4205 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 110640250 Common caiC putative crotonobetaine/carnitine-CoA ligase ECP_0037 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110644121 Common - putative UDP-N-acetyl-D-mannosaminuronic acid transferase ECP_3986 109 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 110640779 Common - hypothetical protein YlbE ECP_0579 17 None None None 110643224 Common - hypothetical ATP-binding protein YghS ECP_3070 3 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 110642167 Common - putative phosphoadenosine phosphosulfate reductase ECP_1997 18 COG3969 COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase General function prediction only 110640840 Common - nucleoside diphosphate kinase regulator ECP_0641 75 COG0782 GreA, Transcription elongation factor Transcription 110642955 Common - putative cytoplasmic protein ECP_2800 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 110641238 Common - dihydroorotase ECP_1054 86 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 110642472 Common - acyl-CoA thioester hydrolase YfbB ECP_2307 69 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 110643918 Common - MarR-family transcriptional regulatory protein ECP_3776 53 COG1846 MarR, Transcriptional regulators Transcription 110644811 Common prfC peptide chain release factor 3 ECP_4758 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 110641260 Common rne ribonuclease E ECP_1076 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 110644071 Common glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase ECP_3929 234 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 110641555 Common - hypothetical transcriptional regulator YcjW ECP_1373 126 COG1609 PurR, Transcriptional regulators Transcription 110644805 Common - ferric iron reductase involved in ferric hydroximate transport ECP_4698 17 COG4114 FhuF, Uncharacterized Fe-S protein General function prediction only 110644044 Common - DNA polymerase III subunit beta ECP_3902 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 110641101 Common - formate transporter ECP_0915 91 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 110644150 Common - lysophospholipase L2 ECP_4019 74 COG2267 PldB, Lysophospholipase Lipid metabolism 110642358 Common - galactose/methyl galaxtoside transporter ATP-binding protein ECP_2188 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110644610 Common - putative ornithine carbamoyltransferase ECP_4498 239 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 110642514 Common - lysine-arginine-ornithine-binding periplasmic protein ECP_2349 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 110642402 Common - DNA-binding response regulator in two-component regulatory system with NarQ or NarX ECP_2233 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110644149 Common rhtB homoserine/homoserine lactone efflux protein ECP_4018 117 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 110640549 Common - transcriptional regulator MarR family (PapX protein) ECP_0344 13 COG1846 MarR, Transcriptional regulators Transcription 110642454 Common - putative transmembrane transporter YfaV ECP_2289 118 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110641701 Common - L-allo-threonine dehydrogenase, NAD(P)-binding ECP_1523 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 110643695 Common livG leucine/isoleucine/valine transporter ATP-binding subunit ECP_3548 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 110643459 Common - N-acetylneuraminate lyase ECP_3308 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 110640707 Common - putative haloacid dehalogenase-like hydrolase ECP_0507 109 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 110640885 Common asnB asparagine synthetase B ECP_0686 157 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 110642754 Common - IS putative transposase ECP_2594 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644269 Common - essential cell division protein ECP_4142 22 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 110644445 Common - D-allose transporter ATP-binding protein ECP_4330 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110640221 Common - putative transporter YaaJ ECP_0008 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 110641755 Common - SoxR-reducing system protein RsxE ECP_1577 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 110642210 Pathogen - hypothetical protein ECP_2040 3 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 110644082 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA ECP_3940 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 110644835 Common - right origin-binding protein ECP_4782 110 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110640830 Common - hypothetical protein YbdD ECP_0631 27 COG2879 COG2879, Uncharacterized small protein Function unknown 110640582 Pathogen - hypothetical protein ECP_0377 1 None None None 110640956 Common - phosphoglycerate mutase ECP_0766 162 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 110643798 Common - hypothetical protein ECP_3653 43 COG0456 RimI, Acetyltransferases General function prediction only 110641748 Common - oriC-binding nucleoid-associated protein ECP_1570 12 None None None 110644261 Common glpX fructose 1,6-bisphosphatase II ECP_4134 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 110641609 Common - ribosomal-protein-L7/L12-serine acetyltransferase ECP_1431 83 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 110644749 Common - hypothetical protein ECP_4642 2 None None None 110641998 Common - chemotaxis regulator CheZ ECP_1826 42 COG3143 CheZ, Chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 110640538 Common - hypothetical protein ECP_0333 23 None None None 110644603 Common - hypothetical protein ECP_4491 1 None None None 110643623 Common aroK shikimate kinase I ECP_3476 200 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 110643407 Common truB tRNA pseudouridine synthase B ECP_3254 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 110644670 Common - hypothetical membrane protein ECP_4563 17 None None None 110641995 Common - flagellar protein FlhE precursor ECP_1823 10 None None None 110642248 Common - putative glycosyltransferase ECP_2078 110 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 110644529 Common hfq RNA-binding protein Hfq ECP_4417 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 110642480 Common - NADH dehydrogenase subunit N ECP_2315 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 110640887 Common - N-acetylglucosamine repressor NagC ECP_0688 169 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110643251 Common - predicted outer membrane lipoprotein ECP_3097 12 COG4238 COG4238, Murein lipoprotein Cell envelope biogenesis, outer membrane 110640367 Common - sugar fermentation stimulation protein A ECP_0156 108 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 110644740 Common - hypothetical protein YeeU ECP_4633 10 None None None 110641642 Common - hypothetical protein YddH ECP_1464 48 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 110643394 Common - hypothetical protein YhbO (hypothetical protease) ECP_3241 158 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 110642697 Common - hypothetical tRNA/rRNA methyltransferase YfhQ ECP_2537 157 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 110642030 Common fliD flagellar capping protein ECP_1858 96 COG1345 FliD, Flagellar capping protein Cell motility and secretion 110643437 Common - hypothetical protein ECP_3284 10 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 110641244 Common - putative virulence factor MviM ECP_1060 104 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 110642094 Pathogen - hypothetical protein ECP_1922 1 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 110643519 Common - hypothetical protein YrdB ECP_3368 14 None None None 110644496 Common - divalent-cation tolerance protein CutA ECP_4381 101 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 110641055 Common - putative cytoplasmic protein YbjN ECP_0867 13 None None None 110644785 Common - type I restriction enzyme EcoAI R protein ECP_4678 142 COG4096 HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 110642872 Common - serine/threonine-specific protein phosphatase 2 ECP_2712 69 None None None 110642669 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein ECP_2509 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 110644753 Common - tyrosine recombinase/inversion of on/off regulator of fimA ECP_4646 211 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 110644256 Common - hypothetical protein YiiQ precursor ECP_4129 11 None None None 110643317 Common - hypothetical protein ECP_3164 167 COG0073 ARC1, EMAP domain General function prediction only 110642764 Common - hypothetical protein YfiR precursor ECP_2604 15 None None None 110641122 Common - hypothetical protein ECP_0936 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 110643871 Common - lipopolysaccharide core biosynthesis protein WaaP ECP_3728 10 None None None 110641342 Common - lysozyme ECP_1160 44 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 110641770 Common - hypothetical protein YdhL precursor ECP_1594 25 COG3313 COG3313, Predicted Fe-S protein General function prediction only 110643978 Common - hypothetical protein ECP_3836 2 None None None 110642913 Common - sucrose-6-phosphate hydrolase ECP_2753 52 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 110644050 Common tnaA tryptophanase ECP_3908 44 COG3033 TnaA, Tryptophanase Amino acid transport and metabolism 110642682 Common - hypothetical protein ECP_2522 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 110643638 Common ompR osmolarity response regulator ECP_3491 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110643892 Common - tRNA guanosine-2'-O-methyltransferase ECP_3749 201 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 110641267 Common - 3-oxoacyl-(acyl carrier protein) synthase III ECP_1083 231 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 110644798 Common - hypothetical protein ECP_4691 14 None None None 110642543 Common - phosphohistidine phosphatase ECP_2378 51 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 110641408 Common - DNA polymerase V subunit UmuD ECP_1226 55 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 110641859 Common - DNA-binding transcriptional activator ECP_1685 11 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 110642304 Common gatY tagatose-bisphosphate aldolase ECP_2134 178 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110640786 Common - peptidyl-prolyl cis-trans isomerase B (rotamase B) ECP_0586 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 110642180 Common - putative transposase (part) ECP_2010 17 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 110642744 Common - thioredoxin 2 ECP_2584 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 110643265 Common - protein YgiW precursor ECP_3111 26 COG3111 COG3111, Uncharacterized conserved protein Function unknown 110643539 Common secY preprotein translocase subunit SecY ECP_3388 225 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 110644583 Common - hypothetical protein YtfL ECP_4471 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 110641270 Common acpP acyl carrier protein ECP_1086 182 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 110644171 Common - uridine phosphorylase ECP_4040 100 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 110642797 Common - hypothetical protein ECP_2637 86 COG2128 COG2128, Uncharacterized conserved protein Function unknown 110643174 Common - polysialic acid capsule expression protein KpsF ECP_3020 173 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 110644557 Common - 30S ribosomal subunit protein S6 ECP_4445 108 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 110644818 Common - deoxyribose-phosphate aldolase ECP_4765 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 110642674 Common - putative intimin/invasin (SinH-like protein) ECP_2514 17 None None None 110641854 Common - 6-phospho-beta-glucosidase ECP_1680 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 110642189 Common - putative transposase ECP_2019 42 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110644433 Common - putative ABC transporter ATP-binding protein ECP_4314 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 110642920 Common eno phosphopyruvate hydratase ECP_2760 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 110641251 Common flgD flagellar basal body rod modification protein ECP_1067 106 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 110641083 Common clpA ATP-dependent Clp protease ATP-binding subunit ECP_0897 226 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 110643831 Common sgbH 3-keto-L-gulonate-6-phosphate decarboxylase ECP_3686 54 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 110643602 Common - hypothetical protein ECP_3453 6 None None None 110642306 Common - putative nucleoside transporter YegT ECP_2136 56 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 110640459 Common gmhA phosphoheptose isomerase ECP_0252 124 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 110642053 Common - flagellar biosynthesis protein FliO ECP_1881 8 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 110642329 Common - hypothetical protein YehQ ECP_2159 6 None None None 110641108 Common rpsA 30S ribosomal protein S1 ECP_0922 217 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 110643572 Common - probable general secretion pathway protein L ECP_3421 12 COG3297 PulL, Type II secretory pathway, component PulL Intracellular trafficking and secretion 110641951 Common - hypothetical protein YebS (putative membrane protein) ECP_1777 54 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 110642120 Common - hypothetical protein ECP_1949 1 None None None 110643199 Common - hypothetical type II secretion protein GspE ECP_3045 211 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 110643796 Common - hypothetical protein YhjX ECP_3649 105 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110643749 Common - hypothetical protein ECP_3602 18 COG3721 HugX, Putative heme iron utilization protein Inorganic ion transport and metabolism 110643314 Common - hypothetical protein YqjI (hypothetical transcriptional regulator PadR-like family) ECP_3161 70 COG1695 COG1695, Predicted transcriptional regulators Transcription 110643666 Common - hypothetical outer membrane usher protein ECP_3519 33 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 110641549 Common - hypothetical oxidoreductase YcjS ECP_1367 190 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 110641871 Common - hypothetical protein YdjY precursor ECP_1697 3 None None None 110642734 Common - anti-RNA polymerase sigma factor SigE ECP_2574 32 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 110642974 Common - hypothetical protein ECP_2819 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 110644308 Common - hypothetical protein ECP_4181 15 None None None 110644613 Common - putative cytoplasmic protein YjgK ECP_4501 28 COG2731 EbgC, Beta-galactosidase, beta subunit Carbohydrate transport and metabolism 110642345 Common - putative DedA family, membrane protein ECP_2175 64 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 110642359 Common - D-galactose-binding periplasmic protein precursor ECP_2189 91 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110640243 Pathogen - hypothetical protein ECP_0030 1 None None None 110643905 Common - alpha-xylosidase YicI ECP_3762 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 110644713 Common - hypothetical protein ECP_4606 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110640660 Common - phosphate regulon transcriptional regulatory protein PhoB ECP_0458 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110640930 Common sdhC succinate dehydrogenase cytochrome b556 large membrane subunit ECP_0733 92 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 110641200 Common - hypothetical protein YcdN ECP_1016 95 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 110641220 Common - putative curli production protein CsgC precursor ECP_1036 5 None None None 110641574 Common - hypothetical protein YdaM ECP_1394 184 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110642838 Common - putative HTH-type transcriptional regulator YgjM ECP_2678 19 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 110643781 Common - cell division protein ECP_3634 15 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 110643220 Common - hypothetical protein ECP_3066 18 COG3054 COG3054, Predicted transcriptional regulator General function prediction only 110644133 Common - hypothetical protein YifL ECP_4002 6 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 110641981 Common ruvC Holliday junction resolvase ECP_1807 195 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 110641974 Common - hypothetical protein ECP_1800 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 110640714 Common - hypothetical protein ECP_0514 30 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 110641915 Common - hypothetical protein YeaP ECP_1741 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110641028 Common - fructose-6-phosphate aldolase ECP_0838 107 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 110643861 Common - 2-amino-3-ketobutyrate coenzyme A ligase ECP_3718 191 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 110641314 Common - truncated integrase ECP_1132 19 None None None 110641841 Pathogen - hypothetical protein ECP_1667 1 None None None 110643304 Common - transcriptional activator TtdR ECP_3150 167 COG0583 LysR, Transcriptional regulator Transcription 110644638 Common - PapX protein ECP_4531 54 COG1846 MarR, Transcriptional regulators Transcription 110642907 Common - hypothetical oxidoreductase YgcW ECP_2747 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110642901 Common - ferredoxin-like protein YgcO ECP_2741 36 COG2440 FixX, Ferredoxin-like protein Energy production and conversion 110640762 Common - hypothetical ABC transporter ECP_0562 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 110642885 Common - protein-L-isoaspartate O-methyltransferase ECP_2725 152 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 110640371 Common - ferrichrome outer membrane transporter ECP_0160 120 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 110640563 Pathogen - hypothetical protein ECP_0358 1 None None None 110643724 Common - hypothetical transmembrane protein YhhJ ECP_3577 107 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 110641834 Common ihfA integration host factor subunit alpha ECP_1660 210 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 110642779 Common - hypothetical protein ECP_2619 102 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 110642129 Common - nitrogen assimilation transcriptional regulator ECP_1958 189 COG0583 LysR, Transcriptional regulator Transcription 110641580 Common - hypothetical protein ECP_1400 107 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 110641157 Common - hypothetical protein YccW ECP_0973 142 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 110640696 Common - hypothetical protein ECP_0496 2 None None None 110644476 Common - DNA-binding transcriptional dual regulator ECP_4361 112 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110643579 Common - probable bifunctional chitinase/lysozyme precursor ECP_3428 24 None None None 110641532 Common - peptide transport system permease protein SapC ECP_1350 212 COG4171 SapC, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 110643072 Common - hypothetical protein ECP_2917 18 COG1661 COG1661, Predicted DNA-binding protein with PD1-like DNA-binding motif General function prediction only 110643336 Common - glucuronate isomerase ECP_3183 59 COG1904 UxaC, Glucuronate isomerase Carbohydrate transport and metabolism 110640216 Common - homoserine kinase ECP_0003 129 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 110640836 Common dsbG disulfide isomerase/thiol-disulfide oxidase ECP_0637 30 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 110643286 Common - putative disulfide oxidoreductase ECP_3132 27 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 110640283 Common - putative ABC transporter periplasmic solute binding protein (YabN protein) ECP_0072 87 COG4533 COG4533, ABC-type uncharacterized transport system, periplasmic component General function prediction only 110641893 Common - hypothetical oxidoreductase YdjG ECP_1719 202 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 110642658 Common - DNA replication initiation factor ECP_2498 166 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 110642720 Common - putative transglycosylase ECP_2560 95 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 110643254 Common - putative mannitol dehydrogenase ECP_3100 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 110643367 Common - glycerate kinase I ECP_3214 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 110641984 Common aspS aspartyl-tRNA synthetase ECP_1810 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110642046 Common fliH flagellar assembly protein H ECP_1874 47 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 110644620 Common - putative membrane protein YjgP ECP_4510 74 COG0795 COG0795, Predicted permeases General function prediction only 110643599 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein ECP_3450 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 110644427 Common - formate-dependent nitrite reductase complex subunit NrfF ECP_4308 89 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 110643878 Common rpmB 50S ribosomal protein L28 ECP_3735 159 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 110643384 Common - N-acetylgalactosamine-specific PTS system transporter subunit IIC ECP_3231 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 110643230 Common - hydrogenase 2 accessory protein HypG ECP_3076 72 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 110640529 Common - chromosome replication initiation inhibitor protein ECP_0324 96 COG0583 LysR, Transcriptional regulator Transcription 110641004 Common - hypothetical protein ECP_0814 148 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 110643752 Common - putative ATP-binding protein of ABC transport system ECP_3605 249 COG4559 COG4559, ABC-type hemin transport system, ATPase component Inorganic ion transport and metabolism 110643643 Common - hypothetical protein YhgG ECP_3496 9 COG1378 COG1378, Predicted transcriptional regulators Transcription 110643335 Common - altronate hydrolase ECP_3182 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 110644299 Common - acetylglutamate kinase ECP_4172 208 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 110643788 Common dppF dipeptide transporter ATP-binding subunit ECP_3641 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 110644074 Common - F0F1 ATP synthase subunit gamma ECP_3932 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 110643701 Common - RNA polymerase factor sigma-32 ECP_3554 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 110640650 Common - hypothetical protein ECP_0448 8 None None None 110642933 Common - hypothetical protein YqcC ECP_2773 29 COG3098 COG3098, Uncharacterized protein conserved in bacteria Function unknown 110640507 Common - MarR-family transcriptional regulatory protein ECP_0301 59 COG1846 MarR, Transcriptional regulators Transcription 110644192 Common - hypothetical protein ECP_4061 130 COG1739 COG1739, Uncharacterized conserved protein Function unknown 110644211 Common - GTP-binding protein ECP_4082 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 110640522 Pathogen - hypothetical protein ECP_0317 1 None None None 110641598 Common - ATP-dependent RNA helicase HrpA ECP_1418 133 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 110643472 Common - arginine repressor ECP_3321 75 COG1438 ArgR, Arginine repressor Transcription 110641410 Common - disulfide bond formation protein B ECP_1228 36 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 110643765 Common - hypothetical protein ECP_3618 89 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 110641033 Common - putative ABC transporter periplasmic binding protein ECP_0845 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 110641106 Common - putative metalloprotease YcaL ECP_0920 133 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 110640338 Common - S-adenosylmethionine decarboxylase ECP_0127 30 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 110640278 Pathogen - hypothetical protein ECP_0067 1 None None None 110641901 Common - glyceraldehyde 3-phosphate dehydrogenase A ECP_1727 222 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 110642895 Common - aminopeptidase in alkaline phosphatase isozyme conversion ECP_2735 35 COG2234 Iap, Predicted aminopeptidases General function prediction only 110640801 Common - DNA-binding response regulator in two-component regulatory system with CusS ECP_0602 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110644813 Pathogen - hypothetical protein ECP_4760 1 COG5487 COG5487, Small integral membrane protein Function unknown 110640705 Common - queuosine biosynthesis protein QueC ECP_0505 175 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 110643060 Common - D-3-phosphoglycerate dehydrogenase ECP_2905 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 110640811 Common - hypothetical protein ECP_0612 61 COG2170 COG2170, Uncharacterized conserved protein Function unknown 110643032 Common - guanine deaminase ECP_2877 159 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 110643360 Common - keto-acid formate acetyltransferase ECP_3207 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 110642078 Common - putative sulfite oxidase subunit YedZ ECP_1906 77 COG2717 COG2717, Predicted membrane protein Function unknown 110640334 Common - dihydrolipoamide dehydrogenase ECP_0123 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 110641544 Common - bacterial extracellular solute-binding protein YcjN ECP_1362 96 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 110644234 Common - formate dehydrogenase-O, iron-sulfur subunit ECP_4105 162 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110644428 Common - formate-dependent nitrite reductase complex subunit NrfG ECP_4309 48 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 110642354 Common - hypothetical protein ECP_2184 4 None None None 110640485 Common - putative transposase ECP_0279 46 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 110643345 Common - hypothetical protein ECP_3192 9 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 110640669 Common secD preprotein translocase subunit SecD ECP_0467 222 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 110642999 Common - DNA mismatch repair protein ECP_2844 28 COG3066 MutH, DNA mismatch repair protein DNA replication, recombination, and repair 110644691 Common - hypothetical protein ECP_4584 3 None None None 110643105 Common - hypothetical protein YggM ECP_2950 3 None None None 110644536 Common - exoribonuclease R ECP_4424 204 COG0557 VacB, Exoribonuclease R Transcription 110640896 Common - putative inner membrane protein ECP_0697 70 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 110642089 Common - hypothetical protein ECP_1917 7 None None None 110641797 Common - pyruvate kinase ECP_1623 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 110642338 Common - hypothetical ABC transporter ATP-binding protein YehX ECP_2168 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 110643745 Pathogen - hypothetical protein ECP_3598 1 None None None 110643992 Common - hypothetical protein ECP_3850 16 COG3596 COG3596, Predicted GTPase General function prediction only 110640925 Common - hypothetical protein ECP_0728 55 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 110641074 Common - hydroxylamine reductase ECP_0888 76 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 110641476 Common - oligopeptide transport ATP-binding protein OppF ECP_1294 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 110643699 Common - hypothetical protein YhhK (putative acetyltransferase) ECP_3552 11 None None None 110640917 Common - hypothetical protein ECP_0720 49 COG3272 COG3272, Uncharacterized conserved protein Function unknown 110642969 Common - putative membrane protein (hypothetical ImcF-related protein) ECP_2814 43 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 110642217 Common - hypothetical protein YeeU ECP_2047 10 None None None 110641420 Common - transglycosylase associated protein ECP_1238 61 COG2261 COG2261, Predicted membrane protein Function unknown 110644689 Pathogen - hypothetical protein ECP_4582 1 None None None 110643628 Common - hypothetical protein YrfD ECP_3481 10 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 110640329 Common - colicin immunity protein ECP_0118 8 None None None 110642320 Common - hypothetical protein YehE precursor ECP_2150 4 None None None 110644682 Common - hypothetical protein ECP_4575 20 None None None 110643496 Common - putative sugar uptake ABC transporter ATP-binding protein ECP_3345 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110643237 Common - hydrogenase 2 small subunit ECP_3083 77 COG1740 HyaA, Ni,Fe-hydrogenase I small subunit Energy production and conversion 110643998 Common - putative radC-like protein ECP_3856 173 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 110640425 Common - probable methyltransferase YafE ECP_0216 204 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 110640450 Pathogen - hypothetical protein ECP_0242 3 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 110641790 Common - hypothetical protein ECP_1616 6 None None None 110642863 Common - transposase/IS protein ECP_2703 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110643944 Pathogen - hypothetical protein ECP_3802 1 None None None 110643079 Common - hypothetical protein ECP_2924 95 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 110641278 Common - ferric-rhodotorulic acid outer membrane transporter ECP_1094 106 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 110641581 Common - putative universal stress protein ECP_1401 81 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 110642687 Common - protein SseB ECP_2527 13 None None None 110642922 Common mazG nucleoside triphosphate pyrophosphohydrolase ECP_2762 156 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 110643589 Common - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) ECP_3438 123 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 110641352 Common - minor capsid protein C ECP_1170 178 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 110642327 Common - hypothetical protein YehM ECP_2157 22 None None None 110644021 Common emrD multidrug resistance protein D ECP_3879 145 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641305 Common - hypothetical protein YcfD ECP_1123 59 COG2850 COG2850, Uncharacterized conserved protein Function unknown 110643776 Common - hypothetical protein YhjK ECP_3629 164 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 110644513 Common - fumarate reductase subunit C ECP_4398 23 COG3029 FrdC, Fumarate reductase subunit C Energy production and conversion 110642037 Common - hypothetical protein ECP_1865 97 COG2135 COG2135, Uncharacterized conserved protein Function unknown 110644162 Common - transcriptional regulator, LysR family ECP_4031 153 COG0583 LysR, Transcriptional regulator Transcription 162138273 Common - glutamate racemase ECP_4184 188 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 110643005 Common - DNA-binding transcriptional repressor ECP_2850 128 COG1609 PurR, Transcriptional regulators Transcription 110640853 Common cspE cold shock protein E ECP_0654 180 COG1278 CspC, Cold shock proteins Transcription 110641685 Common - hypothetical protein YneG ECP_1507 15 None None None 110642107 Common - P4-like integrase ECP_1936 96 COG0582 XerC, Integrase DNA replication, recombination, and repair 110643847 Common - L-lactate permease ECP_3704 102 COG1620 LldP, L-lactate permease Energy production and conversion 110643507 Common - hypothetical protein YhdU ECP_3356 5 None None None 110643702 Common ftsX cell division protein FtsX ECP_3555 112 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 110643054 Common - hypothetical protein ECP_2899 136 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 110642379 Common - fructose-specific PTS IIA/HPr components ECP_2209 121 COG4668 MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain Carbohydrate transport and metabolism 110640643 Common - hypothetical protein ECP_0441 6 None None None 110640405 Common - lysine decarboxylase, constitutive ECP_0194 88 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 110643127 Common - hypothetical protein ECP_2973 18 None None None 110642361 Pathogen - hypothetical protein ECP_2191 1 None None None 110643483 Common - rod shape-determining protein MreD ECP_3332 50 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 110643530 Common - hypothetical protein YhdL ECP_3379 17 COG3036 COG3036, Uncharacterized protein conserved in bacteria Function unknown 110642993 Common - hypothetical protein ECP_2838 10 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 110641366 Common - tail assembly protein I ECP_1184 13 COG4723 COG4723, Phage-related protein, tail component Function unknown 110642295 Common - putative protease YegQ ECP_2125 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 110640752 Common - DNA-binding transcriptional activator of copper-responsive regulon genes ECP_0552 143 COG0789 SoxR, Predicted transcriptional regulators Transcription 110643706 Common - hypothetical protein ECP_3559 15 COG3776 COG3776, Predicted membrane protein Function unknown 110642374 Common - putative Na+ dependent nucleoside transporter-family protein ECP_2204 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 110643882 Common slmA nucleoid occlusion protein ECP_3739 54 COG1309 AcrR, Transcriptional regulator Transcription 110643562 Common - probable general secretion pathway protein A ECP_3411 8 None None None 110641746 Common - putative oxidoreductase ECP_1568 178 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 110641283 Common - beta-hexosaminidase ECP_1099 175 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 110644723 Common - transposase/IS protein ECP_4616 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110644590 Common - putative sugar transport system ATP-binding protein ECP_4478 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 110642781 Pathogen - hypothetical protein ECP_2621 1 None None None 110641710 Common - spermidine N(1)-acetyltransferase ECP_1532 103 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 110642029 Common - flagellin ECP_1857 124 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 110642811 Common - multidrug resistance protein B ECP_2651 201 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110642662 Common purN phosphoribosylglycinamide formyltransferase ECP_2502 221 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 110643610 Common - hypothetical protein YhfS ECP_3461 8 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 110643018 Common - hypothetical sigma-54-dependent transcriptional regulator YgeV ECP_2863 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 110643818 Common - hypothetical protein ECP_3673 31 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 110644596 Common - peptidase PmbA ECP_4484 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 110641205 Common - N-glycosyltransferase PgaC ECP_1021 173 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110642578 Common glk glucokinase ECP_2414 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 110644549 Common - putative L-ascorbate 6-phosphate lactonase ECP_4437 27 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 110641110 Common - hypothetical protein ECP_0924 127 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 110642228 Common - putative transcriptional regulator, LysR family ECP_2058 160 COG0583 LysR, Transcriptional regulator Transcription 110641691 Common - DNA-binding transcriptional repressor MarR ECP_1513 101 COG1846 MarR, Transcriptional regulators Transcription 110642640 Common - putative oxidoreductase Fe-S binding subunit ECP_2480 216 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 110644207 Common - hypothetical protein ECP_4078 2 None None None 110641047 Common - putative membrane protein YbjJ ECP_0859 72 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 110643162 Common - hypothetical protein ECP_3008 48 COG3596 COG3596, Predicted GTPase General function prediction only 110642410 Common - cytochrome c-type protein NapC ECP_2243 49 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 110643067 Common - arginine exporter protein ECP_2912 86 COG1279 COG1279, Lysine efflux permease General function prediction only 110640859 Common lipB lipoyltransferase ECP_0660 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 110642149 Common - putative polyketide synthase ECP_1979 237 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110644026 Common - putative symporter YidK ECP_3884 110 COG4146 COG4146, Predicted symporter General function prediction only 110643717 Common - holo-(acyl carrier protein) synthase 2 ECP_3570 44 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 110644743 Common - hypothetical protein ECP_4636 3 None None None 110644292 Common - pyruvate formate lyase II activase ECP_4165 62 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 110640343 Common - glucose dehydrogenase ECP_0132 60 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 110643091 Pathogen - hypothetical protein ECP_2936 1 None None None 110644200 Common - hypothetical protein ECP_4071 17 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 110644036 Common - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase ECP_3894 119 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 110640296 Common - cell division protein FtsL ECP_0085 25 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 110642255 Common - putative pyruvyl transferase ECP_2085 23 COG2327 WcaK, Uncharacterized conserved protein Function unknown 110643350 Common - hypothetical protein YqjF ECP_3197 50 COG2259 COG2259, Predicted membrane protein Function unknown 110643801 Common - 2-ketogluconate reductase ECP_3656 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 110641908 Common - hypothetical protein YeaJ ECP_1734 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 110643396 Common - hypothetical protein ECP_3243 74 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 110644416 Common - hypothetical murein hydrolase exporter (LrgA family) ECP_4297 29 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 110642110 Common - inner membrane ABC-transporter YbtQ ECP_1939 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 110643648 Common - high-affinity gluconate transporter ECP_3501 77 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 110642427 Common - DNA-binding response regulator in two-component regulatory system with RcsC and YojN ECP_2260 170 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 110643689 Common ugpQ cytoplasmic glycerophosphodiester phosphodiesterase ECP_3542 140 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 110643322 Common - hypothetical transporter YgjI ECP_3169 45 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110642039 Common - outer membrane porin protein LC precursor ECP_1867 30 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 110642707 Common - hypothetical ABC transporter permease protein YphD ECP_2547 113 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 110644225 Common - D-tyrosyl-tRNA deacylase ECP_4096 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 110641394 Common - hypothetical protein ECP_1212 1 None None None 110644329 Common - thiamine biosynthesis protein ThiC ECP_4207 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 110642265 Common - predicted glycosyl transferase ECP_2095 58 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110640989 Common MoaE molybdopterin synthase large subunit ECP_0799 160 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 110643600 Common - para-aminobenzoate synthase component II ECP_3451 240 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 110642745 Common - putative cytoplasmic protein ECP_2585 40 COG3148 COG3148, Uncharacterized conserved protein Function unknown 110641179 Common - trimethylamine-N-oxide reductase 1 precursor ECP_0995 160 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 110643164 Common - hypothetical protein YkfF ECP_3010 4 None None None 110642186 Common - hypothetical protein ECP_2016 1 None None None 110641335 Common - hypothetical protein ECP_1153 5 None None None 110643292 Common - glycogen synthesis protein GlgS ECP_3138 5 None None None 110640720 Common - maltose O-acetyltransferase ECP_0520 117 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 110642609 Common - short chain dehydrogenase ECP_2449 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110640393 Common - undecaprenyl pyrophosphate synthase ECP_0182 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 110641619 Common - putative regulatory protein, GntR family ECP_1441 231 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 110643371 Common - D-galactarate dehydratase ECP_3218 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 110642801 Common nrdF ribonucleotide-diphosphate reductase subunit beta ECP_2641 141 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 110643564 Common - probable general secretion pathway protein D precursor ECP_3413 140 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 110642016 Common - ferritin-like protein 2 ECP_1844 73 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 110644348 Common - acetate operon transcriptional repressor IclR ECP_4227 124 COG1414 IclR, Transcriptional regulator Transcription 110642520 Common - acetyl-CoA carboxylase subunit beta ECP_2355 219 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 110643158 Pathogen - hypothetical protein ECP_3004 1 None None None 110641447 Common - calcium/sodium:proton antiporter ECP_1265 55 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 110640865 Common - hypothetical protein ECP_0666 165 COG1576 COG1576, Uncharacterized conserved protein Function unknown 110641723 Common tqsA putative transport protein ECP_1545 186 COG0628 PerM, Predicted permease General function prediction only 110642826 Common - DNA-binding transcriptional activator of glucitol operon ECP_2666 12 COG4578 GutM, Glucitol operon activator Transcription 110642099 Common - putative DNA-binding protein ECP_1927 37 COG2916 Hns, DNA-binding protein H-NS General function prediction only 110641575 Common zntB zinc transporter ECP_1395 99 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 110640898 Common - putative regulatory protein, DeoR family ECP_0699 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 110640624 Common - putative esterase ECP_0420 105 COG0627 COG0627, Predicted esterase General function prediction only 110641654 Common - formate dehydrogenase, nitrate-inducible, iron-sulfur subunit ECP_1476 160 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110642446 Common glpQ glycerophosphodiester phosphodiesterase ECP_2281 115 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 110640235 Common rpsT 30S ribosomal protein S20 ECP_0022 206 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 110644665 Pathogen - hypothetical protein ECP_4558 1 None None None 110643594 Common - hypothetical protein ECP_3445 30 COG3089 COG3089, Uncharacterized protein conserved in bacteria Function unknown 110643820 Common malS periplasmic alpha-amylase precursor ECP_3675 155 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 110644575 Common - cell morphogenesis/cell wall metabolism regulator ECP_4463 45 COG2846 COG2846, Regulator of cell morphogenesis and NO signaling Cell division and chromosome partitioning 110642315 Common - putative periplasmic protein (hypothetical protein YohN) ECP_2145 10 COG5455 COG5455, Predicted integral membrane protein Function unknown 110644489 Common - putative POT family, di-/tripeptide transport protein ECP_4374 81 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 110641347 Pathogen - hypothetical protein ECP_1165 1 None None None 110644055 Common - hypothetical protein YieF ECP_3913 114 COG0431 COG0431, Predicted flavoprotein General function prediction only 110642286 Common - multidrug efflux system subunit MdtC ECP_2116 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 110641651 Pathogen - hypothetical protein ECP_1473 1 None None None 110640520 Common - hypothetical protein ECP_0315 9 COG5266 CbiK, ABC-type Co2+ transport system, periplasmic component Inorganic ion transport and metabolism 110640317 Common - type IV pilin biogenesis protein ECP_0106 143 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 110642172 Common - hypothetical protein ECP_2002 2 COG3596 COG3596, Predicted GTPase General function prediction only 110643832 Common - putative L-xylulose 5-phosphate 3-epimerase ECP_3687 27 COG3623 SgaU, Putative L-xylulose-5-phosphate 3-epimerase Carbohydrate transport and metabolism 110641610 Common - hypothetical protein YdcK (putative transferase) ECP_1432 8 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 110642438 Common - hypothetical protein ECP_2273 7 COG4685 COG4685, Uncharacterized protein conserved in bacteria Function unknown 110644755 Pathogen - hypothetical protein ECP_4648 1 None None None 110641136 Common - hypothetical protein YcbX ECP_0952 64 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 110640794 Common - part of the phage tail assembly protein ECP_0595 3 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 110640813 Common - phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex ECP_0614 27 COG2977 EntD, Phosphopantetheinyl transferase component of siderophore synthetase Secondary metabolites biosynthesis, transport, and catabolism 110641445 Common - 2-dehydro-3-deoxyphosphooctonate aldolase ECP_1263 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 110642898 Common cysJ sulfite reductase subunit alpha ECP_2738 106 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 110640466 Common - hypothetical protein ECP_0259 101 COG1360 MotB, Flagellar motor protein Cell motility and secretion 110641021 Common - manganese transport regulator MntR ECP_0831 91 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 110642595 Common ligA NAD-dependent DNA ligase LigA ECP_2435 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 110643866 Common - putative beta1,3-glucosyltransferase WaaV ECP_3723 221 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110642634 Common - ethanolamine utilization protein EutS ECP_2474 20 COG4810 EutS, Ethanolamine utilization protein Amino acid transport and metabolism 110640264 Common apaH diadenosine tetraphosphatase ECP_0051 103 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 110640417 Common rcsF outer membrane lipoprotein ECP_0206 13 None None None 110643025 Common - hypothetical protein YqeC ECP_2870 19 None None None 110644409 Common - DNA-binding transcriptional dual regulator ECP_4290 137 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110640796 Common - outer membrane protease ECP_0597 12 COG4571 OmpT, Outer membrane protease Cell envelope biogenesis, outer membrane 110643226 Common - probable low-affinity inorganic phosphate transporter 2 ECP_3072 150 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 110644504 Common - hypothetical protein YjeJ ECP_4389 5 None None None 110640308 Common - cell division protein FtsZ ECP_0097 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 110640257 Common - ferredoxin-like protein ECP_0044 35 COG2440 FixX, Ferredoxin-like protein Energy production and conversion 110641419 Common - hypothetical protein YcgR ECP_1237 19 COG5581 COG5581, Predicted glycosyltransferase Cell envelope biogenesis, outer membrane 110643417 Common folP dihydropteroate synthase ECP_3264 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 110643962 Common - hypothetical protein ECP_3820 9 None None None 110644273 Common - hypothetical protein YiiX precursor ECP_4146 10 COG3863 COG3863, Uncharacterized distant relative of cell wall-associated hydrolases Function unknown 110644787 Common - putative GTP-binding protein YjiA ECP_4680 126 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 110640604 Common - putative carbamate kinase ECP_0399 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 110640731 Common - DNA polymerase III subunits gamma and tau ECP_0531 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 110641760 Common - pyridoxamine 5'-phosphate oxidase ECP_1584 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 110640670 Common secF preprotein translocase subunit SecF ECP_0468 220 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 110641095 Common - anaerobic dimethyl sulfoxide reductase, subunit B ECP_0909 164 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 110642071 Pathogen - hypothetical protein ECP_1899 1 None None None 110643409 Common infB translation initiation factor IF-2 ECP_3256 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 110644540 Common - hypothetical protein YjfK ECP_4428 10 None None None 110644730 Pathogen - hypothetical protein ECP_4623 1 None None None 110644007 Common - hypothetical protein ECP_3865 48 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 110642421 Common - hypothetical ABC transporter ECP_2254 32 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 110642755 Common - protein disaggregation chaperone ECP_2595 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 110644551 Common - L-ascorbate-specific enzyme IIB component of PTS ECP_4439 16 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 110644335 Common - transcriptional regulator HU subunit alpha ECP_4213 211 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 110642485 Common - NADH dehydrogenase subunit I ECP_2320 191 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 110644190 Common fadB multifunctional fatty acid oxidation complex subunit alpha ECP_4059 191 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 110644282 Common metF 5,10-methylenetetrahydrofolate reductase ECP_4155 150 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 110642724 Common - putative ferredoxin-like protein YfhL ECP_2564 104 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 110640494 Pathogen - hypothetical protein ECP_0288 1 None None None 110640973 Common - putative membrane transport protein ECP_0783 106 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 110641140 Common - paraquat-inducible protein B ECP_0956 66 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 110642599 Common - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) ECP_2439 138 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 110641487 Common - protein YciE ECP_1305 24 COG3685 COG3685, Uncharacterized protein conserved in bacteria Function unknown 110643859 Common - predicted glycosyl transferase ECP_3716 205 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 110641634 Common - glutathione S-transferase ECP_1456 14 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 110643758 Pathogen - hypothetical protein ECP_3611 1 None None None 110641398 Common minE cell division topological specificity factor MinE ECP_1216 80 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 110644649 Pathogen - major pilu subunit operon regulatory protein PapB ECP_4542 2 None None None 110642984 Common - putative amidase ECP_2829 177 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 110640809 Common - hypothetical protein ECP_0610 38 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 110642478 Common - hypothetical protein YfbL ECP_2313 37 COG2234 Iap, Predicted aminopeptidases General function prediction only 110640996 Common - putative membrane protein YbhR ECP_0806 183 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 110641930 Common - hypothetical protein ECP_1756 113 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 110644246 Common - 2-keto-3-deoxygluconate permease ECP_4119 27 None None None 110640281 Common thiP thiamin transporter membrane protein ECP_0070 179 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 110640877 Common - glutamate and aspartate transporter subunit ECP_0678 155 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 110640271 Common - ATP-dependent helicase HepA ECP_0060 133 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 110640827 Common - 2,3-dihydroxybenzoate-2,3-dehydrogenase ECP_0628 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 110641484 Common - intracellular septation protein A ECP_1302 85 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 110642852 Common - hydrogenase isoenzymes formation protein HYpd ECP_2692 109 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 110640578 Common - putative transcriptional regulator, AraC family protein ECP_0373 123 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 110641151 Common - hypothetical protein ECP_0967 42 COG3304 COG3304, Predicted membrane protein Function unknown 110641738 Common - glucuronide transporter ECP_1560 80 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 110642277 Common - hypothetical transmembrane protein YegE ECP_2107 192 COG3447 COG3447, Predicted integral membrane sensor domain Signal transduction mechanisms 110640821 Common - iron-enterobactin transporter membrane protein ECP_0622 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 110644085 Common - asparagine synthetase AsnA ECP_3943 31 COG2502 AsnA, Asparagine synthetase A Amino acid transport and metabolism 110644780 Common - hypothetical protein YjiP ECP_4673 27 COG5464 COG5464, Uncharacterized conserved protein Function unknown 110642556 Common - multidrug resistance protein Y ECP_2392 183 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 110641880 Common - hypothetical protein YnjH precursor ECP_1706 8 None None None 110642605 Common - sulfate/thiosulfate transporter subunit ECP_2445 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 110641503 Pathogen - hypothetical protein ECP_1321 1 None None None 110643850 Common - putative tRNA/rRNA methyltransferase YibK ECP_3707 163 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 110641210 Common - putative hydrolase ECP_1026 43 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 110642056 Common fliR flagellar biosynthesis protein FliR ECP_1884 119 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 110644176 Common - 2-oxo-3-deoxygalactonate kinase ECP_4045 39 COG3734 DgoK, 2-keto-3-deoxy-galactonokinase Carbohydrate transport and metabolism 110642289 Common - DNA-binding response regulator in two-component regulatory system with BaeS ECP_2119 211 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 110643935 Pathogen - hypothetical protein ECP_3793 1 None None None 110642062 Common - hypothetical protein YodC (putative cytoplasmic protein) ECP_1890 5 COG5475 COG5475, Uncharacterized small protein Function unknown 110642082 Pathogen - hypothetical protein ECP_1910 2 None None None 110643994 Pathogen - hypothetical membrane protein ECP_3852 1 None None None 110644482 Common - DNA-binding response regulator in two-component regulatory system with DcuS ECP_4367 148 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 110642529 Common - hypothetical protein YfcL ECP_2364 17 None None None 110642778 Common - hypothetical protein ECP_2618 68 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 110643378 Common - PTS system, N-acetylgalactosamine-specific IID component (AgaE) ECP_3225 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 110642491 Common - NADH dehydrogenase subunit B ECP_2326 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 110644642 Pathogen - PapE protein ECP_4535 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 110641979 Common ruvA Holliday junction DNA helicase motor protein ECP_1805 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 110644353 Common - peptidase E ECP_4232 35 COG3340 PepE, Peptidase E Amino acid transport and metabolism 110641864 Common - succinylglutamate desuccinylase ECP_1690 25 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 110642463 Common - bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase ECP_2298 245 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 110643829 Common - putative bacterial extracellular solute-binding protein YiaO precursor ECP_3684 108 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 110644314 Common - pantothenate kinase ECP_4188 73 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 110641381 Common - hypothetical transcriptional regulator YcgE ECP_1199 63 COG0789 SoxR, Predicted transcriptional regulators Transcription 110644384 Common - tRNA-dihydrouridine synthase A ECP_4265 203 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 110641944 Common - hypothetical protein ECP_1770 8 None None None 110643271 Common - putative iron compound-binding protein of ABC transporter family ECP_3117 43 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 110643626 Common - hypothetical protein ECP_3479 6 None None None 110643980 Common - putative reverse transcriptase ECP_3838 91 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 110640679 Common - phosphatidylglycerophosphatase A ECP_0477 105 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 110643040 Common - ssDNA exonuclease RecJ ECP_2885 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 110642841 Common - formate hydrogenlyase maturation protein HYch ECP_2681 13 None None None 110643915 Common - transposase/IS protein ECP_3773 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 110641714 Common - putative voltage-gated ClC-type chloride channel ClcB ECP_1536 134 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 110641232 Common - hypothetical protein ECP_1048 137 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 110643219 Common - putative permease ECP_3065 75 COG0795 COG0795, Predicted permeases General function prediction only 110641433 Common - translation-associated GTPase ECP_1251 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 110643674 Common - aspartate-semialdehyde dehydrogenase ECP_3527 195 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 110644064 Common - transcriptional antiterminator BglG ECP_3922 29 COG3711 BglG, Transcriptional antiterminator Transcription 110641062 Common artM arginine transporter permease subunit ArtM ECP_0876 170 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 110644833 Common - NTPase ECP_4780 36 COG1986 COG1986, Uncharacterized conserved protein Function unknown 110643184 Pathogen - hypothetical protein ECP_3030 1 None None None 110642165 Pathogen - hypothetical protein ECP_1995 1 None None None 110644183 Common - sec-independent translocase ECP_4052 39 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 110644615 Common - hypothetical acetyltransferase YjgM ECP_4505 46 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 110643722 Common nikE nickel transporter ATP-binding protein ECP_3575 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 110641118 Common - putative metallothionein SmtA ECP_0932 94 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 110641705 Common - hypothetical metabolite transport protein YdfJ ECP_1527 160 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 110644825 Common serB phosphoserine phosphatase ECP_4772 154 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 110641514 Common - putative inner membrane protein YciS ECP_1332 21 COG3771 COG3771, Predicted membrane protein Function unknown 110642333 Common - putative two-component response-regulatory protein YehT ECP_2163 211 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 110640906 Common - hypothetical protein ECP_0707 149 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 110644217 Common - hypothetical oxidoreductase YihU ECP_4088 170 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 110641393 Pathogen - hypothetical protein ECP_1211 1 None None None 110640540 Common - RadC-like DNA repair protein ECP_0335 173 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 110642394 Common - 16S rRNA pseudouridylate synthase A ECP_2224 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 110642470 Common - O-succinylbenzoate synthase ECP_2305 71 COG1441 MenC, O-succinylbenzoate synthase Coenzyme metabolism 110644263 Common - glycerol uptake facilitator protein ECP_4136 134 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 110643517 Common - hypothetical amino-acid ABC transporter ATP-binding protein YhdZ ECP_3366 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 110644465 Common - hypothetical protein ECP_4350 107 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 110641192 Common - hypothetical protein YcdJ ECP_1008 75 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 110643957 Pathogen - CS12 fimbria chaperone protein precursor ECP_3815 1 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 110641703 Common - hypothetical protein YdfZ ECP_1525 7 None None None 110644443 Common - D-allose kinase ECP_4326 150 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 110643633 Common - ribosome-associated heat shock protein Hsp15 ECP_3486 107 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 110640883 Common - MiaB protein ECP_0684 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 110641608 Common - hypothetical protein ECP_1430 24 COG2841 COG2841, Uncharacterized protein conserved in bacteria Function unknown 110642504 Common - phosphodiesterase ECP_2339 46 COG0622 COG0622, Predicted phosphoesterase General function prediction only 110640575 Common - hypothetical protein ECP_0370 24 COG3059 COG3059, Predicted membrane protein Function unknown 110641149 Common - hypothetical protein YccR (TfoX domain - putative DNA transformation protein) ECP_0965 20 COG3070 TfoX, Regulator of competence-specific genes Transcription 110640245 Common carB carbamoyl phosphate synthase large subunit ECP_0032 237 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 110640716 Common - putative methyltransferase ECP_0516 158 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 110642464 Common - hypothetical protein YfbH ECP_2299 19 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 110642790 Common - hypothetical transcriptional regulator YgaV ECP_2630 86 COG0640 ArsR, Predicted transcriptional regulators Transcription 110642752 Common - putative transposase ECP_2592 31 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641873 Common - hypothetical protein YnjA ECP_1699 28 COG2128 COG2128, Uncharacterized conserved protein Function unknown 110641494 Common - anthranilate synthase component I ECP_1312 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 110641297 Common - hypothetical protein YcfZ ECP_1115 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 110642590 Common - purine nucleoside phosphorylase ECP_2430 150 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 110643042 Common xerD site-specific tyrosine recombinase XerD ECP_2887 230 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 110644084 Common - DNA-binding transcriptional regulator AsnC ECP_3942 154 COG1522 Lrp, Transcriptional regulators Transcription 110642456 Common - hypothetical transcriptional regulator YfaX ECP_2291 117 COG1414 IclR, Transcriptional regulator Transcription 110642428 Common - hybrid sensory kinase in two-component regulatory system with RcsB and YojN ECP_2261 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 110644451 Common - aminoalkylphosphonic acid N-acetyltransferase ECP_4336 52 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 110642356 Common - dihydropyrimidine dehydrogenase ECP_2186 174 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 110642957 Common - hypothetical protein ECP_2802 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 110641147 Pathogen - hypothetical protein ECP_0963 1 None None None 110642347 Common - multidrug resistance outer membrane protein MdtQ ECP_2177 109 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 110642679 Common hisS histidyl-tRNA synthetase ECP_2519 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 110642253 Common - colanic acid biosynthesis protein WcaM ECP_2083 5 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 110644194 Common hemG protoporphyrinogen oxidase ECP_4063 37 COG4635 HemG, Flavodoxin Energy production and conversion / Coenzyme metabolism 110641566 Common - hypothetical protein YnaJ ECP_1386 6 None None None 110642415 Common - assembly protein for periplasmic nitrate reductase ECP_2248 20 COG3062 NapD, Uncharacterized protein involved in formation of periplasmic nitrate reductase Inorganic ion transport and metabolism 110644515 Common - fumarate reductase flavoprotein subunit ECP_4400 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 110643062 Common - hypothetical protein YqfE ECP_2907 2 None None None 110644187 Common - 3-octaprenyl-4-hydroxybenzoate decarboxylase ECP_4056 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 110641941 Common - hypothetical protein YobF ECP_1767 4 None None None 110641225 Common mdoG glucan biosynthesis protein G ECP_1041 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 110642714 Common - nitric oxide dioxygenase ECP_2554 132 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 110641508 Common cysB transcriptional regulator CysB ECP_1326 190 COG0583 LysR, Transcriptional regulator Transcription 110644524 Common - hypothetical protein ECP_4412 222 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 110641630 Common - probable tonB-dependent receptor YncD precursor ECP_1452 125 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 110643134 Pathogen - hypothetical protein ECP_2980 3 None None None 110640967 Common modC molybdate transporter ATP-binding protein ECP_0777 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 110641466 Common - global DNA-binding transcriptional dual regulator H-NS ECP_1284 26 COG2916 Hns, DNA-binding protein H-NS General function prediction only 110642848 Common - formate hydrogenlyase regulatory protein HycA ECP_2688 7 None None None 110644766 Common - D-mannonate oxidoreductase ECP_4659 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 110640378 Common - hypothetical protein ECP_0167 129 COG2860 COG2860, Predicted membrane protein Function unknown 110644679 Common - modification methylase ECP_4572 131 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 110642368 Common - hypothetical protein ECP_2198 111 COG2855 COG2855, Predicted membrane protein Function unknown 110643556 Common rplB 50S ribosomal protein L2 ECP_3405 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 110644473 Common - arginine:agmatin antiporter ECP_4358 189 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 110644414 Common - hypothetical protein ECP_4295 32 COG0583 LysR, Transcriptional regulator Transcription 110644127 Common hemD uroporphyrinogen-III synthase ECP_3996 57 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 110641644 Common - hypothetical protein ECP_1466 121 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 110640382 Common - serine endoprotease ECP_0171 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 110644046 Pathogen - hypothetical protein ECP_3904 1 None None None 110641530 Common - peptide transport system ATP-binding protein SapF ECP_1348 249 COG4167 SapF, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 110640987 Common moaC molybdenum cofactor biosynthesis protein C ECP_0797 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 110642197 Pathogen - hypothetical protein ECP_2027 1 None None None 110643069 Common - fructose-bisphosphate aldolase ECP_2914 174 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 110641162 Common - hydrogenase 1 large subunit ECP_0978 107 COG0374 HyaB, Ni,Fe-hydrogenase I large subunit Energy production and conversion 110641344 Common - Bor protein precursor ECP_1162 6 None None None 110643680 Common - gluconate utilization operon gntUKR repressor GalR/LacI familiy ECP_3533 127 COG1609 PurR, Transcriptional regulators Transcription 110641539 Common pspB phage shock protein B ECP_1357 23 None None None 110644709 Common - hypothetical protein ECP_4602 6 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 110641725 Common pntA NAD(P) transhydrogenase subunit alpha ECP_1547 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 110642136 Common - putative polyketide synthase ECP_1966 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 110642762 Common - phospho-2-dehydro-3-deoxyheptonate aldolase ECP_2602 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 110641682 Common - hypothetical protein YneE (putative membrane protein) ECP_1504 56 COG3781 COG3781, Predicted membrane protein Function unknown 110643509 Pathogen - hypothetical protein ECP_3358 1 None None None 110644158 Common - hypothetical protein ECP_4027 58 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 110640845 Common - citrate lyase alpha chain ECP_0646 31 COG3051 CitF, Citrate lyase, alpha subunit Energy production and conversion 110643400 Common - hypothetical peptidase YhbV ECP_3247 49 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 110643112 Common mltC murein transglycosylase C ECP_2957 127 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 110644201 Common - hypothetical protein YihG (putative acyltransferase) ECP_4072 31 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 110644703 Pathogen - hypothetical protein ECP_4596 2 None None None 110641365 Common - tail assembly protein K ECP_1183 14 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 110642400 Common - hypothetical protein ECP_2231 2 None None None 110641805 Common sufA iron-sulfur cluster assembly scaffold protein ECP_1631 161 COG0316 IscA, Uncharacterized conserved protein Function unknown 110640953 Common - zinc transporter ZitB ECP_0763 178 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 110640408 Common - Rho-binding antiterminator ECP_0197 13 COG4568 Rof, Transcriptional antiterminator Transcription 110644735 Pathogen - hypothetical protein ECP_4628 1 None None None 110644672 Common - hypothetical transposase-like protein ECP_4565 109 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 110641023 Common - hypothetical protein ECP_0833 87 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 110643204 Common - putative lipoprotein AcfD precursor ECP_3050 3 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 110641373 Common - iron transport protein, ATP-binding component ECP_1191 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 110643410 Common nusA transcription elongation factor NusA ECP_3257 216 COG0195 NusA, Transcription elongation factor Transcription 110644561 Pathogen - hypothetical protein ECP_4449 1 None None None 110642948 Common - hypothetical protein ECP_2790 71 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 110640944 Common - acyl-CoA thioester hydrolase YbgC ECP_0747 134 COG0824 FcbC, Predicted thioesterase General function prediction only 110641452 Common - DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) ECP_1270 224 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription